View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17326_low_46 (Length: 263)
Name: NF17326_low_46
Description: NF17326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17326_low_46 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 254
Target Start/End: Original strand, 478968 - 479205
Alignment:
| Q |
16 |
atcacacatatattcagtagtatactcaaaccnnnnnnntgagtttttgttggaagtatactttctgaaatattattatatatgcatactttcaaaatga |
115 |
Q |
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| T |
478968 |
atcacacatatattcagtagtatactcaaaccaaaaaaatgagtttttgttggaagtatactttctgaaatattattatatatgcatactttcaaaatga |
479067 |
T |
|
| Q |
116 |
ctttgagaatgagataacaacctcccaaatataattcaatttacatttatcctaagaaagacattaaaatggtgcttgtacatcattacatttttcatcc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
479068 |
ctttgagaatgagataacaacctcccaaatataattgaatttacatttatcctaagaaagacatt-aaatggtgcttgtacatcattacatttttcatcc |
479166 |
T |
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| Q |
216 |
ctctgtgaaggtgaatatgaggtgagtcagtgaatgttc |
254 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
479167 |
ctctgtgaaggtgaatatgaggtgagtcagtgaatgttc |
479205 |
T |
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