View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17326_low_50 (Length: 252)

Name: NF17326_low_50
Description: NF17326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17326_low_50
NF17326_low_50
[»] scaffold0148 (2 HSPs)
scaffold0148 (18-180)||(29272-29434)
scaffold0148 (54-180)||(32960-33086)
[»] chr4 (56 HSPs)
chr4 (18-180)||(47053759-47053921)
chr4 (54-181)||(47058473-47058600)
chr4 (51-179)||(28505208-28505335)
chr4 (52-179)||(21235027-21235153)
chr4 (60-181)||(49426324-49426445)
chr4 (58-188)||(17287477-17287607)
chr4 (53-179)||(28957707-28957832)
chr4 (63-179)||(40841461-40841576)
chr4 (53-180)||(38026072-38026198)
chr4 (58-180)||(17288343-17288465)
chr4 (73-182)||(54167490-54167599)
chr4 (95-179)||(29691746-29691830)
chr4 (61-180)||(40841866-40841984)
chr4 (53-179)||(2669403-2669528)
chr4 (61-179)||(12922641-12922758)
chr4 (87-181)||(30545710-30545804)
chr4 (53-179)||(46263031-46263157)
chr4 (53-134)||(31228275-31228356)
chr4 (78-187)||(43979979-43980087)
chr4 (87-179)||(1317059-1317151)
chr4 (53-181)||(12923038-12923166)
chr4 (51-135)||(49424497-49424581)
chr4 (61-180)||(789893-790011)
chr4 (96-178)||(10580040-10580122)
chr4 (53-179)||(43979556-43979682)
chr4 (53-134)||(55347604-55347685)
chr4 (87-187)||(28957302-28957401)
chr4 (78-181)||(2669004-2669106)
chr4 (78-185)||(21235451-21235556)
chr4 (53-179)||(790291-790417)
chr4 (56-178)||(54142325-54142447)
chr4 (53-179)||(54143466-54143592)
chr4 (53-134)||(12108254-12108335)
chr4 (61-185)||(30546119-30546242)
chr4 (87-179)||(31227878-31227969)
chr4 (61-179)||(46262634-46262751)
chr4 (89-134)||(55347970-55348015)
chr4 (61-181)||(1317465-1317584)
chr4 (98-178)||(26168165-26168245)
chr4 (89-185)||(29691518-29691614)
chr4 (89-188)||(51906820-51906919)
chr4 (57-187)||(38025667-38025796)
chr4 (102-178)||(1791389-1791465)
chr4 (63-179)||(3296919-3297035)
chr4 (81-132)||(28505634-28505685)
chr4 (95-177)||(5545018-5545100)
chr4 (102-176)||(48554071-48554145)
chr4 (88-186)||(54168823-54168921)
chr4 (97-178)||(7118002-7118082)
chr4 (89-181)||(48553893-48553985)
chr4 (102-176)||(3296719-3296793)
chr4 (89-125)||(12107758-12107794)
chr4 (89-157)||(30608266-30608334)
chr4 (89-177)||(34129301-34129389)
chr4 (102-134)||(35166708-35166740)
chr4 (95-127)||(35468887-35468919)
[»] chr3 (52 HSPs)
chr3 (18-181)||(20826725-20826888)
chr3 (54-179)||(20831067-20831192)
chr3 (51-180)||(4199451-4199579)
chr3 (36-181)||(35301841-35301986)
chr3 (53-181)||(45539605-45539732)
chr3 (63-134)||(35300788-35300859)
chr3 (53-186)||(36899246-36899378)
chr3 (53-181)||(22406839-22406967)
chr3 (53-134)||(46689725-46689806)
chr3 (53-181)||(42606277-42606404)
chr3 (61-181)||(45539206-45539325)
chr3 (89-181)||(48868588-48868680)
chr3 (61-180)||(4199859-4199977)
chr3 (53-179)||(34950152-34950278)
chr3 (58-180)||(48867648-48867770)
chr3 (62-179)||(7248463-7248580)
chr3 (61-181)||(22407247-22407366)
chr3 (61-181)||(34949753-34949872)
chr3 (53-134)||(2388675-2388756)
chr3 (95-178)||(25770494-25770577)
chr3 (92-185)||(27475383-27475475)
chr3 (87-180)||(46690112-46690204)
chr3 (53-132)||(27475694-27475773)
chr3 (103-177)||(27013583-27013657)
chr3 (78-180)||(42606701-42606802)
chr3 (61-134)||(36899658-36899731)
chr3 (98-181)||(132069-132152)
chr3 (78-134)||(2389053-2389109)
chr3 (95-178)||(37172254-37172337)
chr3 (89-180)||(44504387-44504478)
chr3 (80-134)||(54588501-54588555)
chr3 (99-178)||(44504265-44504344)
chr3 (88-143)||(51587564-51587619)
chr3 (56-134)||(33225532-33225610)
chr3 (95-178)||(9218348-9218431)
chr3 (89-180)||(22814294-22814385)
chr3 (89-180)||(25770319-25770410)
chr3 (88-179)||(32837282-32837372)
chr3 (99-133)||(131948-131982)
chr3 (89-178)||(3799722-3799811)
chr3 (99-180)||(9218524-9218605)
chr3 (89-179)||(51471334-51471424)
chr3 (94-176)||(51588471-51588552)
chr3 (89-134)||(9217864-9217909)
chr3 (106-187)||(45728335-45728416)
chr3 (89-134)||(47343726-47343771)
chr3 (95-164)||(50732368-50732437)
chr3 (95-164)||(50780418-50780487)
chr3 (89-134)||(51755915-51755960)
chr3 (58-134)||(54589545-54589622)
chr3 (89-181)||(47342743-47342835)
chr3 (89-176)||(51507920-51508007)
[»] chr2 (50 HSPs)
chr2 (18-185)||(44934613-44934780)
chr2 (54-181)||(44929980-44930107)
chr2 (66-181)||(10708020-10708135)
chr2 (51-180)||(39096920-39097048)
chr2 (53-185)||(1804628-1804759)
chr2 (53-181)||(11451152-11451279)
chr2 (53-180)||(6476085-6476211)
chr2 (87-182)||(10709471-10709566)
chr2 (63-188)||(27377638-27377763)
chr2 (53-180)||(23222828-23222955)
chr2 (53-179)||(3854065-3854191)
chr2 (87-181)||(39947085-39947179)
chr2 (80-180)||(6476510-6476609)
chr2 (64-180)||(10710978-10711094)
chr2 (53-180)||(12089692-12089819)
chr2 (61-184)||(12090099-12090221)
chr2 (62-181)||(18107399-18107518)
chr2 (58-181)||(39945839-39945962)
chr2 (87-181)||(1804229-1804322)
chr2 (61-179)||(3854471-3854588)
chr2 (78-178)||(26525885-26525984)
chr2 (61-179)||(39096523-39096640)
chr2 (87-132)||(22701558-22701603)
chr2 (56-181)||(23221831-23221956)
chr2 (89-180)||(2035606-2035697)
chr2 (89-180)||(2036604-2036695)
chr2 (87-181)||(11450753-11450846)
chr2 (89-178)||(2191217-2191306)
chr2 (87-172)||(10710829-10710914)
chr2 (59-180)||(21217292-21217413)
chr2 (53-178)||(26525462-26525586)
chr2 (61-134)||(34037852-34037925)
chr2 (59-179)||(21264990-21265110)
chr2 (87-179)||(27378079-27378170)
chr2 (89-180)||(2517411-2517502)
chr2 (100-179)||(21182306-21182385)
chr2 (95-178)||(24093329-24093412)
chr2 (102-176)||(2191392-2191466)
chr2 (68-134)||(18105760-18105826)
chr2 (95-177)||(32861047-32861129)
chr2 (53-126)||(34038217-34038290)
chr2 (98-182)||(24093152-24093236)
chr2 (100-179)||(3624925-3625004)
chr2 (89-179)||(21216922-21217012)
chr2 (89-179)||(21265390-21265480)
chr2 (88-125)||(22701945-22701982)
chr2 (66-115)||(38110386-38110435)
chr2 (89-182)||(7083518-7083611)
chr2 (108-180)||(39600770-39600842)
chr2 (89-185)||(39729607-39729703)
[»] chr5 (46 HSPs)
chr5 (54-180)||(119008-119134)
chr5 (54-180)||(119924-120050)
chr5 (51-179)||(3191797-3191924)
chr5 (54-179)||(19352298-19352423)
chr5 (53-180)||(31162419-31162545)
chr5 (90-182)||(119180-119272)
chr5 (73-181)||(718209-718317)
chr5 (52-179)||(39402609-39402735)
chr5 (63-181)||(5747167-5747284)
chr5 (66-179)||(19353216-19353329)
chr5 (53-182)||(6543411-6543539)
chr5 (53-178)||(21949400-21949524)
chr5 (78-181)||(39402209-39402311)
chr5 (53-179)||(28641557-28641682)
chr5 (58-178)||(14626059-14626179)
chr5 (58-182)||(19353039-19353163)
chr5 (61-185)||(31093400-31093523)
chr5 (53-180)||(4187801-4187928)
chr5 (67-181)||(14625119-14625232)
chr5 (61-186)||(3192204-3192328)
chr5 (53-182)||(3878768-3878897)
chr5 (80-177)||(21949823-21949919)
chr5 (51-176)||(30351667-30351792)
chr5 (87-187)||(28641152-28641251)
chr5 (87-179)||(31162851-31162942)
chr5 (89-180)||(18999641-18999732)
chr5 (53-180)||(31092993-31093120)
chr5 (90-172)||(119786-119868)
chr5 (87-134)||(19352515-19352562)
chr5 (87-181)||(5746758-5746851)
chr5 (87-181)||(6543845-6543937)
chr5 (79-180)||(4186752-4186853)
chr5 (95-134)||(3406692-3406731)
chr5 (54-133)||(30350646-30350725)
chr5 (61-179)||(3879177-3879294)
chr5 (102-180)||(18339314-18339392)
chr5 (79-178)||(8648056-8648155)
chr5 (99-182)||(31176503-31176586)
chr5 (98-179)||(18999365-18999446)
chr5 (62-179)||(31588320-31588438)
chr5 (89-177)||(87262-87350)
chr5 (96-132)||(8647358-8647394)
chr5 (99-178)||(18340661-18340740)
chr5 (58-134)||(37813419-37813495)
chr5 (98-177)||(16284275-16284354)
chr5 (98-181)||(22231170-22231253)
[»] chr7 (29 HSPs)
chr7 (51-178)||(18443176-18443302)
chr7 (61-180)||(18443582-18443700)
chr7 (53-188)||(28898425-28898560)
chr7 (53-181)||(884679-884807)
chr7 (53-181)||(1244008-1244136)
chr7 (87-179)||(41298243-41298335)
chr7 (61-182)||(1244416-1244536)
chr7 (53-181)||(33847863-33847990)
chr7 (78-182)||(41298666-41298769)
chr7 (61-180)||(28898027-28898145)
chr7 (67-181)||(29784358-29784471)
chr7 (61-181)||(33848270-33848389)
chr7 (99-178)||(28838525-28838604)
chr7 (95-178)||(20544145-20544228)
chr7 (87-182)||(30939563-30939658)
chr7 (58-130)||(27310095-27310167)
chr7 (99-182)||(20544321-20544404)
chr7 (87-134)||(22954089-22954136)
chr7 (89-179)||(28852692-28852782)
chr7 (61-134)||(29783978-29784051)
chr7 (89-181)||(17075618-17075710)
chr7 (88-160)||(27311048-27311120)
chr7 (88-176)||(30938597-30938685)
chr7 (100-178)||(49053719-49053797)
chr7 (98-134)||(10466659-10466695)
chr7 (92-177)||(11974894-11974975)
chr7 (58-181)||(4152717-4152840)
chr7 (89-176)||(11974666-11974753)
chr7 (56-180)||(12933029-12933153)
[»] chr1 (42 HSPs)
chr1 (53-180)||(40124074-40124200)
chr1 (53-180)||(32266481-32266607)
chr1 (53-179)||(47410819-47410944)
chr1 (56-185)||(12869623-12869751)
chr1 (53-180)||(9122683-9122809)
chr1 (53-180)||(30427671-30427798)
chr1 (53-179)||(45230128-45230254)
chr1 (61-181)||(17968034-17968153)
chr1 (33-180)||(12868431-12868578)
chr1 (53-180)||(17968433-17968560)
chr1 (53-180)||(46802320-46802446)
chr1 (78-182)||(45230551-45230654)
chr1 (95-178)||(3591171-3591254)
chr1 (61-188)||(30428078-30428204)
chr1 (56-182)||(45664683-45664809)
chr1 (87-180)||(32266913-32267005)
chr1 (73-182)||(36793559-36793668)
chr1 (67-182)||(45665920-45666035)
chr1 (78-134)||(47410466-47410522)
chr1 (58-180)||(1500951-1501073)
chr1 (87-134)||(8997384-8997431)
chr1 (78-181)||(46802743-46802845)
chr1 (89-181)||(5172742-5172834)
chr1 (87-188)||(9123115-9123215)
chr1 (87-180)||(40124506-40124598)
chr1 (89-188)||(9880474-9880573)
chr1 (53-117)||(8998200-8998264)
chr1 (73-181)||(36792237-36792344)
chr1 (89-179)||(3591338-3591428)
chr1 (98-181)||(5683571-5683654)
chr1 (95-178)||(19895573-19895656)
chr1 (99-177)||(5683335-5683413)
chr1 (87-144)||(1500093-1500150)
chr1 (89-178)||(5683161-5683250)
chr1 (89-181)||(6751354-6751447)
chr1 (89-134)||(37717797-37717842)
chr1 (100-188)||(31436395-31436483)
chr1 (111-178)||(50359290-50359357)
chr1 (93-131)||(31889481-31889519)
chr1 (155-188)||(17337960-17337993)
chr1 (89-181)||(50359440-50359532)
chr1 (98-134)||(48155017-48155053)
[»] chr8 (32 HSPs)
chr8 (51-180)||(29917501-29917629)
chr8 (54-180)||(4624358-4624484)
chr8 (88-182)||(4624529-4624623)
chr8 (17-179)||(36155270-36155432)
chr8 (58-186)||(20682894-20683022)
chr8 (61-188)||(12734163-12734289)
chr8 (95-178)||(44024398-44024481)
chr8 (53-175)||(12734569-12734691)
chr8 (61-182)||(29917101-29917221)
chr8 (95-178)||(21005956-21006039)
chr8 (80-134)||(24846006-24846060)
chr8 (89-178)||(12489528-12489616)
chr8 (64-180)||(6298011-6298127)
chr8 (99-179)||(13315201-13315281)
chr8 (56-134)||(44148621-44148699)
chr8 (95-176)||(10047653-10047734)
chr8 (62-187)||(26997843-26997968)
chr8 (88-176)||(16682533-16682621)
chr8 (90-180)||(4694434-4694524)
chr8 (89-180)||(6297863-6297954)
chr8 (88-182)||(26720317-26720411)
chr8 (89-187)||(36156359-36156458)
chr8 (99-177)||(11089133-11089211)
chr8 (89-177)||(9800344-9800432)
chr8 (89-185)||(17914190-17914286)
chr8 (95-126)||(6297687-6297718)
chr8 (99-134)||(20682752-20682787)
chr8 (100-134)||(45369134-45369168)
chr8 (89-134)||(22601542-22601587)
chr8 (56-188)||(40304674-40304806)
chr8 (100-180)||(10047477-10047556)
chr8 (100-175)||(16662483-16662558)
[»] chr6 (24 HSPs)
chr6 (53-179)||(20824163-20824288)
chr6 (53-180)||(14257145-14257271)
chr6 (53-181)||(15147715-15147842)
chr6 (95-178)||(14712830-14712913)
chr6 (53-134)||(6162288-6162369)
chr6 (89-181)||(19595650-19595742)
chr6 (61-181)||(33107334-33107453)
chr6 (53-176)||(33106931-33107054)
chr6 (53-179)||(20228200-20228325)
chr6 (53-179)||(22122184-22122309)
chr6 (61-177)||(6162661-6162776)
chr6 (61-181)||(34984518-34984636)
chr6 (59-182)||(20522127-20522249)
chr6 (87-181)||(20824594-20824687)
chr6 (61-134)||(14257551-14257624)
chr6 (87-180)||(15148148-15148240)
chr6 (89-181)||(19579203-19579295)
chr6 (89-180)||(8710341-8710432)
chr6 (89-180)||(5974009-5974100)
chr6 (62-177)||(7645956-7646071)
chr6 (79-134)||(20521229-20521284)
chr6 (98-180)||(4510186-4510268)
chr6 (95-134)||(8709601-8709640)
chr6 (111-179)||(17157856-17157924)
[»] scaffold0085 (2 HSPs)
scaffold0085 (53-181)||(39817-39944)
scaffold0085 (87-182)||(39417-39511)
[»] scaffold0009 (2 HSPs)
scaffold0009 (99-178)||(107895-107974)
scaffold0009 (66-179)||(107721-107834)
[»] scaffold0063 (2 HSPs)
scaffold0063 (102-176)||(34794-34868)
scaffold0063 (89-177)||(35193-35281)


Alignment Details
Target: scaffold0148 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 29434 - 29272
Alignment:
Q  18 atgccacgtaaacactctgtttgatggttgggcataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttatt 117  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29434 atgccacgtaagcactctgtttgatggttgggcataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttatt 29335  T
Q  118 gaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29334 gaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaataacatatttaaccct 29272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 32960 - 33086
Alignment:
Q  54 atttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaat 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32960 atttgacggcagggactatttgtgctaacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaat 33059  T
Q  154 gtaaggaccaataacatatttaaccct 180  Q
    ||| ||||||| |||||||||||||||    
T  33060 gtagggaccaaaaacatatttaaccct 33086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 2e-82; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 47053921 - 47053759
Alignment:
Q  18 atgccacgtaaacactctgtttgatggttgggcataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttatt 117  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47053921 atgccacgtaagcactctgtttgatggttgggcataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttatt 47053822  T
Q  118 gaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47053821 gaaatgtaaggactattaattaaaatgaggcaaaatgtagggaccaataacatatttaaccct 47053759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 47058473 - 47058600
Alignment:
Q  54 atttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaat 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47058473 atttgacggcagggactatttgtgctaacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaagactattaattaaaatgaggcaaaat 47058572  T
Q  154 gtaaggaccaataacatatttaaccctt 181  Q
    ||| ||||||| ||||||||||||||||    
T  47058573 gtagggaccaaaaacatatttaaccctt 47058600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 51 - 179
Target Start/End: Complemental strand, 28505335 - 28505208
Alignment:
Q  51 ataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaa 150  Q
    |||||||||| |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  | |||||   ||||    
T  28505335 ataatttgacagcagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaatcgtgcaa 28505237  T
Q  151 aatgtaaggaccaataacatatttaaccc 179  Q
    |||||| ||||||| ||||||||||||||    
T  28505236 aatgtagggaccaaaaacatatttaaccc 28505208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 52 - 179
Target Start/End: Complemental strand, 21235153 - 21235027
Alignment:
Q  52 taatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaa 151  Q
    ||||||||| |||| ||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||   |||||    
T  21235153 taatttgacagcagagactacttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt-atcaaaatcgtgcaaa 21235055  T
Q  152 atgtaaggaccaataacatatttaaccc 179  Q
    ||||| ||||||| ||||||||||||||    
T  21235054 atgtagggaccaaaaacatatttaaccc 21235027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 49426324 - 49426445
Alignment:
Q  60 cggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagg 159  Q
    |||||||||| ||||||| ||||||| | |||||||| |||||||||||| ||||||||||||||||||||||||| ||||| |   |||||||||| ||    
T  49426324 cggcagggaccatttgtgttaacggaagtaaaatgtaaggattttaaaaatatttattgaaatgtaaggactattatttaaagtagagcaaaatgtaggg 49426423  T
Q  160 accaataacatatttaaccctt 181  Q
    || || ||||||||||||||||    
T  49426424 acaaaaaacatatttaaccctt 49426445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 17287607 - 17287477
Alignment:
Q  58 gacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaa 157  Q
    ||||||| |||| | ||||  ||||||| | |||||||||| |||||||||| ||||||||||||||||||||||||| ||||| |   ||||||||||     
T  17287607 gacggcaaggaccaattgtattaacggaagtaaaatgtaggaattttaaaaatatttattgaaatgtaaggactattatttaaagtagcgcaaaatgtag 17287508  T
Q  158 ggaccaataacatatttaacccttattttta 188  Q
    |||| ||||||||||||||||||| ||||||    
T  17287507 ggactaataacatatttaaccctttttttta 17287477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 28957707 - 28957832
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  28957707 aatttgacaacagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaa 28957805  T
Q  153 tgtaaggaccaataacatatttaaccc 179  Q
    |||| ||||||| ||||||||||||||    
T  28957806 tgtagggaccaaaaacatatttaaccc 28957832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 179
Target Start/End: Complemental strand, 40841576 - 40841461
Alignment:
Q  63 cagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggacc 162  Q
    ||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||  |||||||   | |||||||| |||||    
T  40841576 cagggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-cttaaaatcgcgtaaaatgtagggacc 40841478  T
Q  163 aataacatatttaaccc 179  Q
    || ||||||||||||||    
T  40841477 aaaaacatatttaaccc 40841461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 38026072 - 38026198
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  38026072 aatttgacaacagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaattgcgtaaaa 38026170  T
Q  153 tgtaaggaccaataacatatttaaccct 180  Q
    |||| | ||||| |||||||||||||||    
T  38026171 tgtaggaaccaaaaacatatttaaccct 38026198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 58 - 180
Target Start/End: Original strand, 17288343 - 17288465
Alignment:
Q  58 gacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaa 157  Q
    |||||||||||| | ||||  ||| ||| | ||||||||||||||||||||||||||||||||||||| ||||||||| | ||| |   ||||||||||     
T  17288343 gacggcagggaccaattgtattaatggaagtaaaatgtagggattttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtag 17288442  T
Q  158 ggaccaataacatatttaaccct 180  Q
    |||| ||||||||||||||||||    
T  17288443 ggactaataacatatttaaccct 17288465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 54167599 - 54167490
Alignment:
Q  73 ttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatat 172  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||  | ||||| | |||||||||| ||||  | |||||||    
T  54167599 ttgtactaacggagtaaaaatgtagggattttaaaaacatttattgaaatataaggactattcttgaaaatcacgcaaaatgtagggacttaaaacatat 54167500  T
Q  173 ttaaccctta 182  Q
    ||||||||||    
T  54167499 ttaaccctta 54167490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 29691746 - 29691830
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    |||||||||||||||||||||||||||||||| |||||||  ||||| | | |||||||||||||||||| ||||||||||||||    
T  29691746 tagggattttaaaaacatttattgaaatgtaaagactattttttaaagtcacgcaaaatgtaaggaccaaaaacatatttaaccc 29691830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 40841866 - 40841984
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||   | |||||||| |||    
T  40841866 ggcagggaccaattgcactaacgaatgaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-cttaaaatcgcgtaaaatgtaggga 40841964  T
Q  161 ccaataacatatttaaccct 180  Q
    |||| |||||| ||||||||    
T  40841965 ccaaaaacataattaaccct 40841984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 2669403 - 2669528
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  || |||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  2669403 aatttgacaacatggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaa 2669501  T
Q  153 tgtaaggaccaataacatatttaaccc 179  Q
    |||| ||||||| ||||||||||||||    
T  2669502 tgtagggaccaaaaacatatttaaccc 2669528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 179
Target Start/End: Complemental strand, 12922758 - 12922641
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   |||||||||| |||    
T  12922758 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaattgcgcaaaatgtaggga 12922660  T
Q  161 ccaataacatatttaaccc 179  Q
    |||| ||||||||||||||    
T  12922659 ccaaaaacatatttaaccc 12922641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 30545804 - 30545710
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   |||||| ||| ||||||| ||||||||||||||||    
T  30545804 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccctt 30545710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 46263031 - 46263157
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   ||||||    
T  46263031 aatttgacaacagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaa 46263130  T
Q  153 tgtaaggaccaataacatatttaaccc 179  Q
     ||| ||||||| ||||||||||||||    
T  46263131 cgtagggaccaaaaacatatttaaccc 46263157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 31228275 - 31228356
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  31228275 aatttgacaacagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaggaactatt 31228356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 43979979 - 43980087
Alignment:
Q  78 ctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||  | |||||   |||||||||| ||||||| ||||||||||||    
T  43979979 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 43980077  T
Q  178 ccttattttt 187  Q
    |||| |||||    
T  43980078 cctttttttt 43980087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 1317151 - 1317059
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   |||||| ||| ||||||| ||||||||||||||    
T  1317151 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaacgtagggaccaaaaacatatttaaccc 1317059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 181
Target Start/End: Original strand, 12923038 - 12923166
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||    |||||    
T  12923038 aatttgacaacagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtacaaaa 12923137  T
Q  153 tgtaaggaccaataacatatttaaccctt 181  Q
    |||| ||||||| |||||||| |||||||    
T  12923138 tgtagggaccaaaaacatattgaaccctt 12923166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 49424581 - 49424497
Alignment:
Q  51 ataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatta 135  Q
    |||| ||||||||||||||  |||||| ||||||| | ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  49424581 ataaattgacggcagggacattttgtgttaacggaagtaaaatgtagggattttaaaaacatttattgatatgtaaagactatta 49424497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 790011 - 789893
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||  | |||||   |||||||||| |||    
T  790011 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtatggactatt-ttcaaaattgcgcaaaatgtaggga 789913  T
Q  161 ccaataacatatttaaccct 180  Q
    |||| |||||||||||||||    
T  789912 ccaaaaacatatttaaccct 789893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 10580122 - 10580040
Alignment:
Q  96 agggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    |||||||||||||||||||||||||||||||||||||||  | ||| | | |||||||||| ||||||| |||||||||||||    
T  10580122 agggattttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtatggaccaaaaacatatttaacc 10580040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 43979682 - 43979556
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   ||||||    
T  43979682 aatttgacaacagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaa 43979583  T
Q  153 tgtaaggaccaataacatatttaaccc 179  Q
      || ||||||| ||||||||||||||    
T  43979582 catagggaccaaaaacatatttaaccc 43979556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 55347685 - 55347604
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||  ||||||||||||  ||||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  55347685 aatttgacaacagggactatttacgctaatggaggaaaaatgtagggattttaaaaacatttattaaaatgtagggactatt 55347604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 28957401 - 28957302
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacccttatttt 186  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||  | |||||   | |||||||| ||||||| |||||||||||||||| ||||    
T  28957401 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattatt-ctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaacccttttttt 28957303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 2669106 - 2669004
Alignment:
Q  78 ctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||     ||||| |||||||||| ||||||||||||    
T  2669106 ctaacgaaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaattgcataaaatataaggaccaaaaacatatttaac 2669008  T
Q  178 cctt 181  Q
    ||||    
T  2669007 cctt 2669004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 21235451 - 21235556
Alignment:
Q  78 ctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| || |||||   |||||||||| |||  || ||||||||||||    
T  21235451 ctaacggaggaaaaatgtagagattttaaaaacatttattgaaatgtagggactatt-atcaaaatcgtgcaaaatgtaggga-gaaaaacatatttaac 21235548  T
Q  178 ccttattt 185  Q
    ||| ||||    
T  21235549 cctaattt 21235556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 790291 - 790417
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | |||||||||||| ||||||||||||||||||||||||||||||||| |  | |||||   ||||||    
T  790291 aatttgacaacagggactatttacactaactcaggaaaaatgtaggaattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaa 790390  T
Q  153 tgtaaggaccaataacatatttaaccc 179  Q
      || ||||||| ||||||||||||||    
T  790391 cttagggaccaaaaacatatttaaccc 790417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 54142447 - 54142325
Alignment:
Q  56 ttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgt 155  Q
    ||||||||  |||| | |||| ||||||||   |||||||| |||||||||||||||||||||||||||| ||||||||  | ||| |   |||||||||    
T  54142447 ttgacggcgaggaccaattgtactaacggagagaaaatgtaaggattttaaaaacatttattgaaatgtatggactattcttcaaagtcgcgcaaaatgt 54142348  T
Q  156 aaggaccaataacatatttaacc 178  Q
    | |||| ||||||||||||||||    
T  54142347 agggactaataacatatttaacc 54142325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 54143466 - 54143592
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||||||||||| | ||||  |||||||   |||||||| |||||||||||||||||||| ||||||| ||||||||  | ||| |   ||||||    
T  54143466 aatttgacggcagggaccaattgtagtaacggagagaaaatgtaaggattttaaaaacatttattaaaatgtagggactattcttcaaagtcgtgcaaaa 54143565  T
Q  153 tgtaaggaccaataacatatttaaccc 179  Q
    | || |||| |||||||||||||||||    
T  54143566 tatagggactaataacatatttaaccc 54143592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 12108254 - 12108335
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    |||||||| ||| |||||||||   ||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||    
T  12108254 aatttgacagcaaggactatttacactaacagagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt 12108335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 30546119 - 30546242
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||| ||| |||||||||||  |||||||  | |||||   |||||||||| |||    
T  30546119 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaatattcattgaaatgtagagactatt-ctcaaaatcgcgcaaaatgtaggga 30546217  T
Q  161 ccaataacatatttaacccttattt 185  Q
    |||| ||||||||||||||| ||||    
T  30546218 ccaaaaacatatttaaccctaattt 30546242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 31227969 - 31227878
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||  | |||||   | |||||||| ||||||| ||||||||||||||    
T  31227969 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattatt-ctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 31227878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 179
Target Start/End: Complemental strand, 46262751 - 46262634
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  ||||||||||  |||||||||||||| ||||||||||| ||||||||  | |||||   |||||||||| |||    
T  46262751 ggcagggaccaattgcactaacggagaaaaaatgtagaaattttaaaaacattcattgaaatgtagggactatt-ttcaaaattgcgcaaaatgtaggga 46262653  T
Q  161 ccaataacatatttaaccc 179  Q
    |||| ||||||||||||||    
T  46262652 ccaaaaacatatttaaccc 46262634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 55347970 - 55348015
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  55347970 aaaatgtagggattttaaaaacatttattgaaatgtagggactatt 55348015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 1317465 - 1317584
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  | ||||||||| |||||||||||||| ||||||||||| ||||||||  | |||||   |||||||||| | |    
T  1317465 ggcagggaccaattgcactaacggagaagaaatgtaggaattttaaaaacattcattgaaatgtagggactatt-ttcaaaatcgcgcaaaatgtaggaa 1317563  T
Q  161 ccaataacatatttaaccctt 181  Q
    |||| ||||||||||||||||    
T  1317564 ccaaaaacatatttaaccctt 1317584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 26168245 - 26168165
Alignment:
Q  98 ggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    |||||||||||||||||||||||||| ||||||||||   |||| | | |||||||||| ||| ||| |||||||||||||    
T  26168245 ggattttaaaaacatttattgaaatgcaaggactattttctaaagtaacgcaaaatgtagggatcaaaaacatatttaacc 26168165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 29691614 - 29691518
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacccttattt 185  Q
    |||||||  |||||||||||||||||| ||||||||| ||||||||  | |||  || ||||||| ||||||| || ||||||||||||||| ||||    
T  29691614 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaatggatgcaaaatataaggactaaaaacatatttaaccctaattt 29691518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 51906820 - 51906919
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaataacatatttaacccttattttt 187  Q
    |||||||  |||||||||||||||||| ||| ||||| ||||||||  || ||| ||| ||||||||||||||| || ||||||||||||||||| ||||    
T  51906820 aaaatgtgaggattttaaaaacatttaatgagatgtagggactattc-ttcaaaggagcgcaaaatgtaaggactaaaaacatatttaacccttaatttt 51906918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 187
Target Start/End: Complemental strand, 38025796 - 38025667
Alignment:
Q  57 tgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgta 156  Q
    ||||||||| ||| | |||  |||||| | ||||||||||||||||||||||   |||||||||||||||||||||||  | |||||   | ||||||||    
T  38025796 tgacggcagagaccaattgcactaacgaaggaaaaatgtagggattttaaaattttttattgaaatgtaaggactatt-ctcaaaattgcgtaaaatgta 38025698  T
Q  157 aggaccaataacatatttaacccttattttt 187  Q
     |||||||  |||||||||||| || |||||    
T  38025697 gggaccaaagacatatttaaccttttttttt 38025667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 1791389 - 1791465
Alignment:
Q  102 tttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    |||||||||||||||||||||||||||||||||  | ||| | | |||||| ||| || |||| |||||||||||||    
T  1791389 tttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaacgtaggggccaaaaacatatttaacc 1791465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 179
Target Start/End: Original strand, 3296919 - 3297035
Alignment:
Q  63 cagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggacc 162  Q
    ||||||||| || || |||||||   |||||||| |||||||||||||||||| ||||| ||| ||||||||  | |||  |  |||||||||||||||     
T  3296919 cagggactaattttgataacggagataaaatgtaaggattttaaaaacatttaatgaaacgtagggactattcttcaaagggtcgcaaaatgtaaggact 3297018  T
Q  163 aataacatatttaaccc 179  Q
    || || |||||||||||    
T  3297019 aaaaatatatttaaccc 3297035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 28505634 - 28505685
Alignment:
Q  81 acggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 132  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  28505634 acggaggaaaaatatagggattttaaaaacatttattaaaatgtagggacta 28505685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 5545018 - 5545100
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    |||| |||||||||||||||||||||||||||| ||||||  | ||| | | |||||||||| | | ||| ||||||||||||    
T  5545018 taggcattttaaaaacatttattgaaatgtaagaactatttttcaaagtcacgcaaaatgtaggaagcaaaaacatatttaac 5545100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 48554145 - 48554071
Alignment:
Q  102 tttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaa 176  Q
    ||||||| |||||||| ||||||||||||||||  | ||| | | |||||||||| ||||||| |||||||||||    
T  48554145 tttaaaagcatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtagggaccaaaaacatatttaa 48554071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 54168823 - 54168921
Alignment:
Q  88 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacccttatttt 186  Q
    |||||||||||||||||||||| ||||||| ||||||| ||| ||||  | ||| | | ||||||| || |||  || |||||||||||||||| ||||    
T  54168823 aaaaatgtagggattttaaaaatatttattaaaatgtagggattattcttcaaagtcacgcaaaatatagggattaaaaacatatttaacccttttttt 54168921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 7118002 - 7118082
Alignment:
Q  97 gggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    |||||||||||||||| ||||||||| |||||||||||  | ||| |   ||||||||| |||||||| |||||||||||||    
T  7118002 gggattttaaaaacatgtattgaaatttaaggactatttttcaaagtcgcgcaaaatgt-aggaccaaaaacatatttaacc 7118082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 48553985 - 48553893
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    |||||||  ||||||||||||  |||| ||||||||| ||||||||  | |||  || ||||||||||||||| || ||| ||||||||||||    
T  48553985 aaaatgtgaggattttaaaaaggtttaatgaaatgtatggactattcttcaaagggacgcaaaatgtaaggactaaaaacgtatttaaccctt 48553893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 3296793 - 3296719
Alignment:
Q  102 tttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaa 176  Q
    |||||||||||||||| ||||||||||||||||  | ||| | | |||||||||| ||| ||| || ||||||||    
T  3296793 tttaaaaacatttattaaaatgtaaggactattcttcaaagtcacgcaaaatgtagggatcaaaaatatatttaa 3296719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 12107794 - 12107758
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgta 125  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  12107794 aaaatgtagggattttagaaacatttattaaaatgta 12107758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 30608334 - 30608266
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaa 157  Q
    |||||||  |||||||||||| || || ||||||||| ||||||||  | ||||||| |||||||||||    
T  30608334 aaaatgtgaggattttaaaaatatataatgaaatgtagggactattcttcaaaatgacgcaaaatgtaa 30608266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 34129301 - 34129389
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    |||||||  |||||||||||| ||||| ||||||||| ||||||||  | ||| ||  ||||||||||||| |  | ||||||||||||    
T  34129301 aaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaattggtgcaaaatgtaagggctgaaaacatatttaac 34129389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 134
Target Start/End: Original strand, 35166708 - 35166740
Alignment:
Q  102 tttaaaaacatttattgaaatgtaaggactatt 134  Q
    |||||||||||||||| ||||||||||||||||    
T  35166708 tttaaaaacatttattaaaatgtaaggactatt 35166740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 127
Target Start/End: Complemental strand, 35468919 - 35468887
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaag 127  Q
    ||||||||||| |||||||||||||||||||||    
T  35468919 tagggattttagaaacatttattgaaatgtaag 35468887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 8e-76; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 20826888 - 20826725
Alignment:
Q  18 atgccacgtaaacactctgtttgatggttgggcataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttatt 117  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20826888 atgccacgtaagcactctgtttgatggttgggcataatttgacggcagggactatttgtgctgacggatgaaaaatgtagggattttaaaaacatttatt 20826789  T
Q  118 gaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  20826788 gaaatgtaaggactattaattaaaatgaggaaaaatgtagggaccaaaaacatatttaaccctt 20826725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 20831067 - 20831192
Alignment:
Q  54 atttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaat 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  20831067 atttgacggcagggactatttgtgctaacggataaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgagaaaaaat 20831166  T
Q  154 gtaaggaccaataacatatttaaccc 179  Q
    ||| ||||||| ||||||||||||||    
T  20831167 gtagggaccaaaaacatatttaaccc 20831192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 180
Target Start/End: Complemental strand, 4199579 - 4199451
Alignment:
Q  51 ataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaa 150  Q
    |||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | |||||   ||||    
T  4199579 ataatttgacagcagggactatttacgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatataaggactatt-ctcaaaatcgtgcaa 4199481  T
Q  151 aatgtaaggaccaataacatatttaaccct 180  Q
    |||||| ||||||| |||||||||||||||    
T  4199480 aatgtagggaccaaaaacatatttaaccct 4199451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 181
Target Start/End: Original strand, 35301841 - 35301986
Alignment:
Q  36 gtttgatggttgggcataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatta 135  Q
    ||||| || |||||||||||||||||||||||||||||||||||||| ||  |||||| |||| |||||||||| |||||| ||||| ||||||| |||     
T  35301841 gtttggtgattgggcataatttgacggcagggactatttgtgctaactgagaaaaaatataggaattttaaaaatatttatcgaaatataaggaccattt 35301940  T
Q  136 attaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
     | |||    || |||||||||||||||||||||||||||| ||||    
T  35301941 gtcaaaggagggtaaaatgtaaggaccaataacatatttaatcctt 35301986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 181
Target Start/End: Original strand, 45539605 - 45539732
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||  |||||||   | ||||    
T  45539605 aatttgacaacagggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-cttaaaatcgcgtaaaa 45539703  T
Q  153 tgtaaggaccaataacatatttaaccctt 181  Q
    |||| ||||||| ||||||||||||||||    
T  45539704 tgtagggaccaaaaacatatttaaccctt 45539732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 35300859 - 35300788
Alignment:
Q  63 cagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35300859 cagggaccatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggattatt 35300788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 53 - 186
Target Start/End: Complemental strand, 36899378 - 36899246
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  36899378 aatttgacaacagggactatttacactaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaa 36899280  T
Q  153 tgtaaggaccaataacatatttaacccttatttt 186  Q
    |||| ||||||| |||||||||||||||||||||    
T  36899279 tgtagggaccaaaaacatatttaacccttatttt 36899246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 22406967 - 22406839
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   ||||||    
T  22406967 aatttgacaacagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaa 22406868  T
Q  153 tgtaaggaccaataacatatttaaccctt 181  Q
     ||||||||||| ||||||||||||||||    
T  22406867 cgtaaggaccaaaaacatatttaaccctt 22406839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 46689806 - 46689725
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46689806 aatttgacaacagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt 46689725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 42606404 - 42606277
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  42606404 aatttgacaacagggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaa 42606306  T
Q  153 tgtaaggaccaataacatatttaaccctt 181  Q
    |||| ||||||| |||| |||||||||||    
T  42606305 tgtagggaccaaaaacaaatttaaccctt 42606277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 45539325 - 45539206
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||   | |||||||| |||    
T  45539325 ggcagggaccaattgcactaacgaatgaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-cttaaaatcgcgtaaaatgtaggga 45539227  T
Q  161 ccaataacatatttaaccctt 181  Q
    |||| |||||| |||||||||    
T  45539226 ccaaaaacataattaaccctt 45539206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 48868588 - 48868680
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| | ||| |   |||||||||| |||| |||||||||||||||||||    
T  48868588 aaaatgtagggattttaaaaacatttattgaaatgtagggactattattcaaagtagcgcaaaatgtagggactaataacatatttaaccctt 48868680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 4199859 - 4199977
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  |||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||  | |||||   |||||||||| |||    
T  4199859 ggcagggaccaattgcactaacggaggaaaaatatagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgtaggga 4199957  T
Q  161 ccaataacatatttaaccct 180  Q
    |||| |||||||||||||||    
T  4199958 ccaaaaacatatttaaccct 4199977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 34950152 - 34950278
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   ||||||    
T  34950152 aatttgacaacagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaattgtgcaaaa 34950251  T
Q  153 tgtaaggaccaataacatatttaaccc 179  Q
     ||| ||||||| ||||||||||||||    
T  34950252 cgtagggaccaaaaacatatttaaccc 34950278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 180
Target Start/End: Complemental strand, 48867770 - 48867648
Alignment:
Q  58 gacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaa 157  Q
    ||||| |||||| | ||||  ||||||| | |||||||| |||||||||||| ||||||||||||||| ||||||||| ||||| |   ||||||||||     
T  48867770 gacggtagggaccaattgtattaacggaagtaaaatgtaaggattttaaaaatatttattgaaatgtagggactattatttaaagtagcgcaaaatgtag 48867671  T
Q  158 ggaccaataacatatttaaccct 180  Q
    |||| ||||||||||||||||||    
T  48867670 ggactaataacatatttaaccct 48867648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 7248463 - 7248580
Alignment:
Q  62 gcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggac 161  Q
    |||| |||||||| |||||||||  ||||||||||||||||||||||| ||||||| |||||| |||||||||  |||||  |||| |||||||| |||     
T  7248463 gcagagactatttatgctaacggcagaaaaatgtagggattttaaaaatatttattaaaatgtgaggactattttttaaagggaggtaaaatgtagggat 7248562  T
Q  162 caataacatatttaaccc 179  Q
     || ||||||||||||||    
T  7248563 taaaaacatatttaaccc 7248580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 22407247 - 22407366
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||  | |||||   |||||||||| |||    
T  22407247 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt-ttcaaaattgcgcaaaatgtaggga 22407345  T
Q  161 ccaataacatatttaaccctt 181  Q
    |||| ||||||||||||||||    
T  22407346 ccaaaaacatatttaaccctt 22407366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 34949872 - 34949753
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||  | |||||   |||||||||| |||    
T  34949872 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgtaggga 34949774  T
Q  161 ccaataacatatttaaccctt 181  Q
    |||| ||||||||||||||||    
T  34949773 ccaaaaacatatttaaccctt 34949753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 2388756 - 2388675
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||||||||||||||||||||  |||||||    
T  2388756 aatttgacaacagggactatttaagctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagagactatt 2388675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 25770577 - 25770494
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    |||||||||||||||||||||||||||||||| |||||||  | ||||| | ||||||||||||||  || |||||||||||||    
T  25770577 tagggattttaaaaacatttattgaaatgtaaagactatttttcaaaatcacgcaaaatgtaaggattaaaaacatatttaacc 25770494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 27475475 - 27475383
Alignment:
Q  92 atgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacccttattt 185  Q
    |||||||||||||||||||||| ||||||||||| ||||||||  | |||||   |||||||||| ||||||| ||||||||||||||| ||||    
T  27475475 atgtagggattttaaaaacattcattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaaccctaattt 27475383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 46690112 - 46690204
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||  | |||||   | |||||||| ||||||| |||||||||||||||    
T  46690112 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattatt-ctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccct 46690204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 27475694 - 27475773
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 132  Q
    ||||||||  ||||||||||||   |||||  | |||||||||||||||||||||||||||||||||||| |||||||||    
T  27475694 aatttgacaacagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatataaggacta 27475773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 27013657 - 27013583
Alignment:
Q  103 ttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    |||||||||| |||| ||||||||||||||||  | ||||| | |||||||||||||||||| ||||||||||||    
T  27013657 ttaaaaacatatattaaaatgtaaggactattcttcaaaatcacgcaaaatgtaaggaccaaaaacatatttaac 27013583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 180
Target Start/End: Original strand, 42606701 - 42606802
Alignment:
Q  78 ctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    |||||| | ||||||||||||||||||||||| ||||||||||||||| ||||||||  | |||||     |||||||| ||||||| ||||||||||||    
T  42606701 ctaacgaaggaaaaatgtagggattttaaaaatatttattgaaatgtagggactatt-ctcaaaattgcataaaatgtagggaccaaaaacatatttaac 42606799  T
Q  178 cct 180  Q
    |||    
T  42606800 cct 42606802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 36899658 - 36899731
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||| | |||  |||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  36899658 ggcagggaccaattgcactaacgaaggaaaaatatagggattttaaaaacatttattgaaatgtagggactatt 36899731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 132069 - 132152
Alignment:
Q  98 ggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    |||||||||||||||||| ||||||||||||||||||  || ||| ||| ||||||||||||||| ||  |||||||||||||||    
T  132069 ggattttaaaaacatttaatgaaatgtaaggactatt-cttcaaaggagtgcaaaatgtaaggactaaatacatatttaaccctt 132152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 2389053 - 2389109
Alignment:
Q  78 ctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    |||||| | ||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  2389053 ctaacgaaggaaaaatgtagggattttaaaaacatttattaaaatgtagggactatt 2389109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 37172337 - 37172254
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    ||||| |||||||||||||| ||||||| |||||| ||||  | ||| | | |||||||||||||||||| |||||||||||||    
T  37172337 taggggttttaaaaacatttgttgaaatctaaggattatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaacc 37172254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 44504387 - 44504478
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||  | |||  |  ||||||||||||||| || |||| ||||||||||    
T  44504387 aaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatgtaaggactaaaaacacatttaaccct 44504478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 54588555 - 54588501
Alignment:
Q  80 aacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    |||||| | |||||||||| |||||||||||||||||||||||||| ||||||||    
T  54588555 aacggaggtaaaatgtaggaattttaaaaacatttattgaaatgtatggactatt 54588501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 44504344 - 44504265
Alignment:
Q  99 gattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    ||||||||||||||||||||||||| |||||||| |  | ||| | | |||||||||||| | ||| |||||||||||||    
T  44504344 gattttaaaaacatttattgaaatgcaaggactaattttcaaagtcacgcaaaatgtaagaatcaaaaacatatttaacc 44504265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 51587619 - 51587564
Alignment:
Q  88 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaat 143  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||||  |||||||    
T  51587619 aaaaatatagggattttaaaaatatttattgaaatgtaatgactattctttaaaat 51587564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 33225610 - 33225532
Alignment:
Q  56 ttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||||||||||  | || |||| |||  ||||||| ||||||||||||||||||| | ||||||| ||||||||    
T  33225610 ttgacggcagggactaaatttggtaacagatataaaatgtggggattttaaaaacatttacttaaatgtagggactatt 33225532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 178
Target Start/End: Original strand, 9218348 - 9218431
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    ||||||||| ||||||||||||||||||| ||  ||||||  | ||| | | |||||||||| ||| ||| |||||||||||||    
T  9218348 tagggatttaaaaaacatttattgaaatgcaaatactatttttcaaagtcacgcaaaatgtagggagcaaaaacatatttaacc 9218431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 22814385 - 22814294
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    |||||||  |||||||||||||||||| ||||||||| ||||||||  | |||  |  |||||||||||| |  || |||||||||||||||    
T  22814385 aaaatgtgaggattttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaagaattaaaaacatatttaaccct 22814294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 25770410 - 25770319
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    |||||||  ||||| |||||||||||| ||||||||| ||||||||  | |||  ||  |||||||||||||| || |||||||| ||||||    
T  25770410 aaaatgtgaggattctaaaaacatttaatgaaatgtagggactattcttcaaagggatacaaaatgtaaggactaaaaacatattgaaccct 25770319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 32837372 - 32837282
Alignment:
Q  88 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    ||||||| || |||||||||||||||| |||||||||   |||||||  ||||  |   ||||||||||||||| |||||||||||||||||    
T  32837372 aaaaatgcagagattttaaaaacattttttgaaatgttgagactattt-ttaacgttgcgcaaaatgtaaggactaataacatatttaaccc 32837282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 133
Target Start/End: Original strand, 131948 - 131982
Alignment:
Q  99 gattttaaaaacatttattgaaatgtaaggactat 133  Q
    ||||||||||||| |||||||||||||||||||||    
T  131948 gattttaaaaacacttattgaaatgtaaggactat 131982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 3799811 - 3799722
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaataacatatttaacc 178  Q
    ||||||||||||||||||||||||||| | |||||||  ||||||| || |||| ||| | |||||||| |||| || || ||||||||||    
T  3799811 aaaatgtagggattttaaaaacatttacttaaatgtagagactatttatcaaaa-gagcgtaaaatgtagggactaaaaagatatttaacc 3799722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 9218524 - 9218605
Alignment:
Q  99 gattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaataacatatttaaccct 180  Q
    ||||||||||||||||| |||||| || ||||||||  || ||| ||| ||||||||||| ||| || |||||||||||||||    
T  9218524 gattttaaaaacatttaatgaaatatagggactatt-cttcaaaggagcgcaaaatgtaatgactaaaaacatatttaaccct 9218605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 51471424 - 51471334
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    |||||||  |||||||||||||||||| |||||||||   ||||||  | |||  || |||||||||||| || || ||||||||||||||    
T  51471424 aaaatgtgaggattttaaaaacatttaatgaaatgtagaaactattcttcaaagggacgcaaaatgtaagaactaagaacatatttaaccc 51471334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 51588471 - 51588552
Alignment:
Q  94 gtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaa 176  Q
    ||||| |||||||||||||||||| |||||| |||| ||||  | ||||| | |||||||| | |||| ||||||||||||||    
T  51588471 gtaggtattttaaaaacatttattaaaatgt-aggattattcttcaaaatcacgcaaaatgcagggactaataacatatttaa 51588552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 9217909 - 9217864
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    |||||||  |||||||||||||||||| ||||||||| ||||||||    
T  9217909 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactatt 9217864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 187
Target Start/End: Original strand, 45728335 - 45728416
Alignment:
Q  106 aaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacccttattttt 187  Q
    |||| ||||| ||||||||| ||||||||  | |||  ||  |||||||||||||| || ||||||||||||||||| ||||    
T  45728335 aaaatatttaatgaaatgtatggactattcttcaaagggacacaaaatgtaaggactaaaaacatatttaacccttaatttt 45728416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 47343726 - 47343771
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||||||||||||||||||||| | |||||||  |||||||    
T  47343726 aaaatgtagggattttaaaaacatttacttaaatgtagagactatt 47343771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 50732437 - 50732368
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaa 164  Q
    |||||||||| |||||||||||||||||| || |||||||  | ||| | | |||||||||| |||||||    
T  50732437 tagggattttgaaaacatttattgaaatgcaaagactatttttaaaagtcatgcaaaatgtagggaccaa 50732368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 50780418 - 50780487
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaa 164  Q
    |||||||||| |||||||||||||||||| || |||||||  | ||| | | |||||||||| |||||||    
T  50780418 tagggattttgaaaacatttattgaaatgcaaagactatttttaaaagtcatgcaaaatgtagggaccaa 50780487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 51755915 - 51755960
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    |||||||  |||||||||||||||||| ||||||||| ||||||||    
T  51755915 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactatt 51755960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 54589545 - 54589622
Alignment:
Q  58 gacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaaca-tttattgaaatgtaaggactatt 134  Q
    ||||||| |||| | || || ||||||| ||||||||||||||||||||||| | ||| ||||||| || ||||||||    
T  54589545 gacggcatggaccaattttgttaacggaggaaaaatgtagggattttaaaaatatttttttgaaatatagggactatt 54589622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 47342835 - 47342743
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    ||||| ||| ||||||||||||||||| | ||||||| |||||||| || |||||   | ||||| || | || || ||||||||||||||||    
T  47342835 aaaatatagtgattttaaaaacatttacttaaatgtagggactatttatcaaaatagcgtaaaatttaggaactaaaaacatatttaaccctt 47342743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 51507920 - 51508007
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaataacatatttaa 176  Q
    |||||||| ||| |||||||||||||| | ||||||| | |||||| || |||| ||| | ||||||||||||| || |||||||||||    
T  51507920 aaaatgtaaggactttaaaaacatttacttaaatgtaggaactatttatcaaaa-gagcgtaaaatgtaaggactaaaaacatatttaa 51508007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 8e-76; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 18 - 185
Target Start/End: Original strand, 44934613 - 44934780
Alignment:
Q  18 atgccacgtaaacactctgtttgatggttgggcataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttatt 117  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44934613 atgccacgtaagcactctgtttgatggttgggcataatttgacggcagggactatttgtgctgacggatgaaaaatgtagggattttaaaaacatttatt 44934712  T
Q  118 gaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacccttattt 185  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||    
T  44934713 gaaatgtaaggactattaattaaaatgaggaaaaatgtagggaccaaaaacatatttaaccctaattt 44934780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 44930107 - 44929980
Alignment:
Q  54 atttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaat 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||    
T  44930107 atttgacggcagggactatttgtgctaacggataaaaaatgtagggattttaaaaatatttattgaaatgtaaggactattaattaaaatgagaaaaaat 44930008  T
Q  154 gtaaggaccaataacatatttaaccctt 181  Q
    ||| ||||||| ||||||||||||||||    
T  44930007 gtagggaccaaaaacatatttaaccctt 44929980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 10708135 - 10708020
Alignment:
Q  66 ggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaat 165  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  | ||||   ||||||||||| |||||||     
T  10708135 ggactatttgtgctaacggatgaaaaatgtaggaattttaaaaacatttattgaaatgtaaggactatttgtcaaaagagggcaaaatgtagggaccaaa 10708036  T
Q  166 aacatatttaaccctt 181  Q
    ||||||||||||||||    
T  10708035 aacatatttaaccctt 10708020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 51 - 180
Target Start/End: Original strand, 39096920 - 39097048
Alignment:
Q  51 ataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaa 150  Q
    |||||||||| |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||  | |||||   ||||    
T  39096920 ataatttgacagcagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggattatt-ctcaaaatcgtgcaa 39097018  T
Q  151 aatgtaaggaccaataacatatttaaccct 180  Q
    |||||| ||||||| |||||||||||||||    
T  39097019 aatgtagggaccaaaaacatatttaaccct 39097048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 1804628 - 1804759
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  1804628 aatttgacaacagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaa 1804726  T
Q  153 tgtaaggaccaataacatatttaacccttattt 185  Q
    |||| ||||||| ||||||||||||||||||||    
T  1804727 tgtagggaccaaaaacatatttaacccttattt 1804759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 181
Target Start/End: Original strand, 11451152 - 11451279
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  11451152 aatttgacaacagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaa 11451250  T
Q  153 tgtaaggaccaataacatatttaaccctt 181  Q
    |||| ||||||| ||||||||||||||||    
T  11451251 tgtagggaccaaaaacatatttaaccctt 11451279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 6476211 - 6476085
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  6476211 aatttgacaacagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaa 6476113  T
Q  153 tgtaaggaccaataacatatttaaccct 180  Q
    |||| ||||||| |||||||||||||||    
T  6476112 tgtagggaccaaaaacatatttaaccct 6476085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 10709566 - 10709471
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctta 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  | ||||| | ||||||| ||| |||||| |||||||||||||||||    
T  10709566 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattcttcaaaatcacgcaaaatctaaagaccaaaaacatatttaaccctta 10709471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 188
Target Start/End: Complemental strand, 27377763 - 27377638
Alignment:
Q  63 cagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggacc 162  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | |||||||| |||||    
T  27377763 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaatgtagggacc 27377665  T
Q  163 aataacatatttaaccct-tattttta 188  Q
    || ||||||||||||||| ||||||||    
T  27377664 aaaaacatatttaaccctatattttta 27377638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 23222828 - 23222955
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||||||||||| | ||||  |||||||   |||||||  ||||||||||||||| |||||||||||||||||||||| ||||| |   ||||||    
T  23222828 aatttgacggcagggaccaattgtagtaacggaaagaaaatgtgaggattttaaaaacatatattgaaatgtaaggactattatttaaagttgcgcaaaa 23222927  T
Q  153 tgtaaggaccaataacatatttaaccct 180  Q
    |||| |||| || |||||||||||||||    
T  23222928 tgtagggactaaaaacatatttaaccct 23222955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 3854191 - 3854065
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   ||||||    
T  3854191 aatttgacaacagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaa 3854092  T
Q  153 tgtaaggaccaataacatatttaaccc 179  Q
     ||| ||||||| ||||||||||||||    
T  3854091 cgtagggaccaaaaacatatttaaccc 3854065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 39947085 - 39947179
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||  | ||| | |  ||||||||| ||||||| ||||||||||||||||    
T  39947085 gaaaaatgtacggattttaaaaacatttattgaaatgtaaggactattgttcaaagtcactcaaaatgtagggaccaaaaacatatttaaccctt 39947179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 180
Target Start/End: Original strand, 6476510 - 6476609
Alignment:
Q  80 aacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | |||||||| ||||||| ||||||||||||||    
T  6476510 aacgaatgaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 6476608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 10710978 - 10711094
Alignment:
Q  64 agggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggacca 163  Q
    |||||||||||||||||||||  |||||||||| |||||||||||| ||||| | ||||||||||||||||  |||||   | | ||||| || ||||||    
T  10710978 agggactatttgtgctaacgggggaaaaatgtaaggattttaaaaatatttactaaaatgtaaggactattttttaaagaaaagtaaaatatagggacca 10711077  T
Q  164 ataacatatttaaccct 180  Q
    | |||||||||||||||    
T  10711078 aaaacatatttaaccct 10711094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 12089819 - 12089692
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | ||||||||||||||||||||||||||||||||||||||||| |||| |  | |||||   ||||||    
T  12089819 aatttgacaacagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaagaactaattctcaaaattgtgcaaaa 12089720  T
Q  153 tgtaaggaccaataacatatttaaccct 180  Q
     ||| ||||||| |||||||||||||||    
T  12089719 cgtagggaccaaaaacatatttaaccct 12089692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 184
Target Start/End: Original strand, 12090099 - 12090221
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||  | |||||   |||||||| | |||    
T  12090099 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgcaggga 12090197  T
Q  161 ccaataacatatttaacccttatt 184  Q
    |||| |||||||||||||||||||    
T  12090198 ccaaaaacatatttaacccttatt 12090221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 18107399 - 18107518
Alignment:
Q  62 gcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggac 161  Q
    ||||| || |||| || ||||||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||  ||||| | | |||||||| | ||||    
T  18107399 gcaggaaccatttatgataacggaggaaaaatttagggattttaaaaacatttattaaaatgtaaggattattctttaaagtcacgcaaaatgcagggac 18107498  T
Q  162 caataacatatttaaccctt 181  Q
     || ||||||||||||||||    
T  18107499 taaaaacatatttaaccctt 18107518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 39945962 - 39945839
Alignment:
Q  58 gacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaa 157  Q
    ||||||| |||| | || |||||||||  ||||||| || |||||||||||||||||||||||||||||||||||||  | ||| | |  ||||||||      
T  39945962 gacggcaaggaccaattttgctaacggtggaaaaatataaggattttaaaaacatttattgaaatgtaaggactattgttcaaagtcactcaaaatgttg 39945863  T
Q  158 ggaccaataacatatttaaccctt 181  Q
    ||||||| ||||||||||||||||    
T  39945862 ggaccaaaaacatatttaaccctt 39945839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 1804322 - 1804229
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | |||||||| ||||||| ||||||||||||||||    
T  1804322 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccctt 1804229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 179
Target Start/End: Original strand, 3854471 - 3854588
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||  | |||||   |||||||||| |||    
T  3854471 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgtaggga 3854569  T
Q  161 ccaataacatatttaaccc 179  Q
    |||| ||||||||||||||    
T  3854570 ccaaaaacatatttaaccc 3854588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 178
Target Start/End: Original strand, 26525885 - 26525984
Alignment:
Q  78 ctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    ||||||||  |||| |||||||||||||||||||||||||||||| || |||||||| || |||||   |||||||||| ||||||| ||||||||||||    
T  26525885 ctaacggagaaaaattgtagggattttaaaaacatttattgaaatatagggactatt-atcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 26525983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 179
Target Start/End: Complemental strand, 39096640 - 39096523
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||  | |||||    |||||| || |||    
T  39096640 ggcagggaccaattgcactaacggagaaaaaatgtatggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaatcgcacaaaatataggga 39096542  T
Q  161 ccaataacatatttaaccc 179  Q
    |||| ||||||||||||||    
T  39096541 ccaaaaacatatttaaccc 39096523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 22701603 - 22701558
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22701603 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 22701558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 181
Target Start/End: Complemental strand, 23221956 - 23221831
Alignment:
Q  56 ttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgt 155  Q
    ||||||| |||||||| || |  |||||||  |||||||||||||| ||||||||||||||||||||||| | ||||||  | ||| |   || ||||||    
T  23221956 ttgacggaagggactaattttagtaacggagcaaaaatgtagggatattaaaaacatttattgaaatgtaggtactattcttcaaagtcgtgctaaatgt 23221857  T
Q  156 aaggaccaataacatatttaaccctt 181  Q
    | ||| ||||||||||||||||||||    
T  23221856 agggatcaataacatatttaaccctt 23221831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 2035697 - 2035606
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||  ||||||   || ||||| || ||||||| |||||||||||||||    
T  2035697 aaaatgtagggattttaaaaacatttattaaaatgtagggattattctttaaaagagggtaaaatatagggaccaaaaacatatttaaccct 2035606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 2036604 - 2036695
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||||  |||||| |  | |||||||| |||  ||||||||||||||||||    
T  2036604 aaaatatagggattttaaaaacattaattgaaatgtagggactattctttaaaaaggtgtaaaatgtagggattaataacatatttaaccct 2036695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 11450846 - 11450753
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||  | |||||   | |||||||| ||||||| ||||||||||||||||    
T  11450846 gaaaaatgtagggatttttaaaacatttattgaaatgtagggattatt-ctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccctt 11450753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 2191306 - 2191217
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||  | |||  |  ||||||||||||||| || |||||||||||||    
T  2191306 aaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaacc 2191217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 10710829 - 10710914
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatat 172  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||||  | ||| | | ||||||| |||||||||| |||||||    
T  10710829 gaaaaatgtaggaattttaaaaacatttattgaaatgcaagggctattcttcaaagtcacgcaaaatataaggaccaaaaacatat 10710914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 21217292 - 21217413
Alignment:
Q  59 acggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaag 158  Q
    ||||||||||||| || || ||||||    |||||||  |||||||||||||||||| ||||||||| ||||||||  | |||  |  ||||||||||||    
T  21217292 acggcagggactaattttgttaacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaag 21217391  T
Q  159 gaccaataacatatttaaccct 180  Q
    ||| || |||||||||||||||    
T  21217392 gactaaaaacatatttaaccct 21217413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 178
Target Start/End: Complemental strand, 26525586 - 26525462
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   ||||  || ||||||||||||||||||||||| ||||||||||||||||| |||| |  | |||||   ||||||    
T  26525586 aatttgacaacagggactatttacactaattgaggaaaaatgtagggattttaaaaatatttattgaaatgtaagaactact-ctcaaaatcgtgcaaaa 26525488  T
Q  153 tgtaaggaccaataacatatttaacc 178  Q
     ||| ||||||| |||||||||||||    
T  26525487 cgtagggaccaaaaacatatttaacc 26525462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 34037925 - 34037852
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  34037925 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt 34037852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 21265110 - 21264990
Alignment:
Q  59 acggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaag 158  Q
    ||||||||||||| || || ||||||    |||||||  |||||||||||||||||| ||||||||| ||||||||  | |||  |  ||||||||||||    
T  21265110 acggcagggactaattttgttaacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaag 21265011  T
Q  159 gaccaataacatatttaaccc 179  Q
    ||| || ||||||||||||||    
T  21265010 gactaaaaacatatttaaccc 21264990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 27378079 - 27378170
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||  | |||||   | |||||||| ||||||| ||||||||||||||    
T  27378079 gaaaaatgtagggatttttaaaacatttattgaaatgtagggattatt-ctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 27378170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 2517502 - 2517411
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    |||||||  |||||||||||||||||| ||||||||| ||||||||  | |||  || ||||||||||||||| || || ||||||||||||    
T  2517502 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacgcaaaatgtaaggactaaaaatatatttaaccct 2517411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 179
Target Start/End: Complemental strand, 21182385 - 21182306
Alignment:
Q  100 attttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    |||||||||||||||| ||||||||||||||||||  | |||  |  ||||||||||||||| || ||||||||||||||    
T  21182385 attttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaaccc 21182306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 24093412 - 24093329
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    ||||||||||||||||||||||||||||| ||||||||||  | ||| | |  ||||||||| ||| ||| |||||||||||||    
T  24093412 tagggattttaaaaacatttattgaaatgcaaggactatttttcaaagtcactcaaaatgtagggatcaaaaacatatttaacc 24093329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 2191466 - 2191392
Alignment:
Q  102 tttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaa 176  Q
    |||||||||||||||| ||||||||||| ||||  | ||| | | |||||||||||||||||| |||||||||||    
T  2191466 tttaaaaacatttattaaaatgtaaggattattcttcaaagtcaagcaaaatgtaaggaccaaaaacatatttaa 2191392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 18105826 - 18105760
Alignment:
Q  68 actatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||| ||||||| || |||||||||||| ||||||||||| |||||||||||||| ||| ||||    
T  18105826 actatttatgctaacagaggaaaaatgtaggaattttaaaaacctttattgaaatgtagggaatatt 18105760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 32861047 - 32861129
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    |||||||||||||||||||||||||||| |||||||||||  | ||| | |  ||||||| | ||||||| ||||||||||||    
T  32861047 tagggattttaaaaacatttattgaaatataaggactatttttcaaagtcacacaaaatgcagggaccaaaaacatatttaac 32861129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 34038217 - 34038290
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaa 126  Q
    ||||||||  ||||||||||||   ||||| || |||||||||||| |||||||||| ||||||||||||||||    
T  34038217 aatttgacaacagggactatttacactaactgaggaaaaatgtaggaattttaaaaatatttattgaaatgtaa 34038290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 24093236 - 24093152
Alignment:
Q  98 ggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctta 182  Q
    |||||||||||||||||| ||||||||| ||||||||  | |||  |  ||||| ||||||||| || |||||||||||||||||    
T  24093236 ggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaagtgtaaggactaaaaacatatttaaccctta 24093152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 3624925 - 3625004
Alignment:
Q  100 attttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    |||||||||||||||||||||||||| ||||||||  | ||| |  | ||||||||||| ||| | ||||||||||||||    
T  3624925 attttaaaaacatttattgaaatgtagggactattcttcaaagtccgtcaaaatgtaagaaccgaaaacatatttaaccc 3625004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 21217012 - 21216922
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    |||||||  |||||||||||||||||| ||||||||| ||||||||  | |||  |  ||||||||||||||| || || |||||||||||    
T  21217012 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaaccc 21216922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 21265390 - 21265480
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    |||||||  |||||||||||||||||| ||||||||| ||||||||  | |||  |  ||||||||||||||| || || |||||||||||    
T  21265390 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaaccc 21265480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 22701945 - 22701982
Alignment:
Q  88 aaaaatgtagggattttaaaaacatttattgaaatgta 125  Q
    |||||||||||||||||||||||||| |||||||||||    
T  22701945 aaaaatgtagggattttaaaaacattcattgaaatgta 22701982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 115
Target Start/End: Original strand, 38110386 - 38110435
Alignment:
Q  66 ggactatttgtgctaacggatgaaaaatgtagggattttaaaaacattta 115  Q
    |||||||||  ||||||||| |||||||||||||||||| ||||||||||    
T  38110386 ggactatttaagctaacggaggaaaaatgtagggattttgaaaacattta 38110435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 7083611 - 7083518
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctta 182  Q
    |||||||  |||||||||||| ||||| ||||||||| ||||||||  | |||  || | ||||||||||||  || |||||||||| ||||||    
T  7083611 aaaatgtgaggattttaaaaaaatttaatgaaatgtagggactattcttcaaatggacgtaaaatgtaaggattaaaaacatatttagccctta 7083518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 39600842 - 39600770
Alignment:
Q  108 aacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    |||||||| |||||||||| |||||||  || ||  || ||||||||||||||  || |||||||||||||||    
T  39600842 aacatttaatgaaatgtaaagactattctttcaagagacgcaaaatgtaaggattaaaaacatatttaaccct 39600770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 39729607 - 39729703
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacccttattt 185  Q
    |||||||  |||||||||||| ||||| |||||| ||| |||||||  | ||| ||| ||||||| ||||||| || ||| || |||||||| ||||    
T  39729607 aaaatgtgaggattttaaaaatatttaatgaaatataaagactattcttcaaactgacgcaaaatataaggactaaaaacgtaattaaccctaattt 39729703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 119134 - 119008
Alignment:
Q  54 atttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaat 153  Q
    ||||||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    ||||||||    
T  119134 atttgacagcagagactatttgtgctatcggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatttattaaaggagggcaaaat 119035  T
Q  154 gtaaggaccaataacatatttaaccct 180  Q
    ||| ||||||| |||||||||||||||    
T  119034 gtagggaccaaaaacatatttaaccct 119008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 119924 - 120050
Alignment:
Q  54 atttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaat 153  Q
    ||||||| |||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  | |||    ||||||||    
T  119924 atttgacagcagagactatttgtgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtaaggactatttgtcaaagaagggcaaaat 120023  T
Q  154 gtaaggaccaataacatatttaaccct 180  Q
    ||| ||||||| |||||||||||||||    
T  120024 gtagggaccaaaaacatatttaaccct 120050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 179
Target Start/End: Complemental strand, 3191924 - 3191797
Alignment:
Q  51 ataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaa 150  Q
    |||||||||| |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  | |||||   ||||    
T  3191924 ataatttgacagcagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaatcgtgcaa 3191826  T
Q  151 aatgtaaggaccaataacatatttaaccc 179  Q
    |||||| |||| || ||||||||||||||    
T  3191825 aatgtagggactaaaaacatatttaaccc 3191797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 179
Target Start/End: Complemental strand, 19352423 - 19352298
Alignment:
Q  54 atttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaat 153  Q
    ||||||| |||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||  | ||||   || |||||    
T  19352423 atttgacagcagggactatttgtgctaacggaggaaaaatgtaagaattttaaaaacatttattgaaatgtaaggactatttgtcaaaaaagggtaaaat 19352324  T
Q  154 gtaaggaccaataacatatttaaccc 179  Q
    ||| | ||||| ||||||||||||||    
T  19352323 gtaggaaccaaaaacatatttaaccc 19352298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 31162545 - 31162419
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | ||||| | | ||||    
T  31162545 aatttgacaacagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcacgtaaaa 31162447  T
Q  153 tgtaaggaccaataacatatttaaccct 180  Q
    |||| ||||||| |||||||||||||||    
T  31162446 tgtagggaccaaaaacatatttaaccct 31162419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 119272 - 119180
Alignment:
Q  90 aaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctta 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||| | | ||||||| |||||||||| |||||||||||||||||    
T  119272 aaatgtagggattttaaaaacatttattgaaatgtaaggactattctttaaagtcacgcaaaatctaaggaccaaaaacatatttaaccctta 119180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 718209 - 718317
Alignment:
Q  73 ttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatat 172  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||||||||||| ||||||| | ||||| | |||||||||| | ||||| |||||||    
T  718209 ttgtgctaacggagcaaaaatgcagggattttaaaaacatttattgaaatgtaagaactattattcaaaattatgcaaaatgtaggaaccaaaaacatat 718308  T
Q  173 ttaaccctt 181  Q
    |||||||||    
T  718309 ttaaccctt 718317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 179
Target Start/End: Original strand, 39402609 - 39402735
Alignment:
Q  52 taatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaa 151  Q
    ||||||||| |||||||||||||  |||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||  | |||||   | |||    
T  39402609 taatttgacagcagggactatttacgctaccggaggaaaaatgtagggattttaaaaatatttattgaaatgtaaggactatt-ctcaaaatcgtgtaaa 39402707  T
Q  152 atgtaaggaccaataacatatttaaccc 179  Q
    ||||| ||||||| ||||||||||||||    
T  39402708 atgtagggaccaaaaacatatttaaccc 39402735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 5747167 - 5747284
Alignment:
Q  63 cagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggacc 162  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | |||||||| |||||    
T  5747167 cagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaatgtagggacc 5747265  T
Q  163 aataacatatttaaccctt 181  Q
    || ||||||||||||||||    
T  5747266 aaaaacatatttaaccctt 5747284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 179
Target Start/End: Original strand, 19353216 - 19353329
Alignment:
Q  66 ggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatga-ggcaaaatgtaaggaccaa 164  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| | | |||||| |||||||| || |||||||    
T  19353216 ggactatttgtgctaacggaggaaaaatgtatggattttaaaaacgtttattgaaatgtaaggactattta-tcaaatgatggcaaaatatagggaccaa 19353314  T
Q  165 taacatatttaaccc 179  Q
     || |||||||||||    
T  19353315 aaatatatttaaccc 19353329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 6543539 - 6543411
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  || |||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  6543539 aatttgacaacaaggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaa 6543441  T
Q  153 tgtaaggaccaataacatatttaaccctta 182  Q
    |||| ||||||| |||||||||||||||||    
T  6543440 tgtagggaccaaaaacatatttaaccctta 6543411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 53 - 178
Target Start/End: Complemental strand, 21949524 - 21949400
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  21949524 aatttgacaacagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaa 21949426  T
Q  153 tgtaaggaccaataacatatttaacc 178  Q
    |||| ||||||| |||||||||||||    
T  21949425 tgtagggaccaaaaacatatttaacc 21949400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 39402311 - 39402209
Alignment:
Q  78 ctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   |||||||||| ||||||| ||||||||||||    
T  39402311 ctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 39402213  T
Q  178 cctt 181  Q
    ||||    
T  39402212 cctt 39402209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 28641557 - 28641682
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  28641557 aatttgacaacagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaa 28641655  T
Q  153 tgtaaggaccaataacatatttaaccc 179  Q
    |||| |||||||  |||||||||||||    
T  28641656 tgtagggaccaaacacatatttaaccc 28641682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 14626059 - 14626179
Alignment:
Q  58 gacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaa 157  Q
    |||||||||||| |||| || |||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |   ||||| | ||     
T  14626059 gacggcagggaccatttatgataacagataaaaaatgtagggattttaaaaacatttattgaaatgtagggactattttttaaagtcgcgcaaagtatag 14626158  T
Q  158 ggaccaataacatatttaacc 178  Q
    ||||||| |||||||||||||    
T  14626159 ggaccaaaaacatatttaacc 14626179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 19353039 - 19353163
Alignment:
Q  58 gacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaa 157  Q
    |||| ||||||| | || || ||||||  |||||||||||||||||||||||||||||||||||||| |||||||||  | ||| | |  |||||| |||    
T  19353039 gacgacagggaccaattttgttaacggtggaaaaatgtagggattttaaaaacatttattgaaatgtgaggactattcttcaaagtcacacaaaatctaa 19353138  T
Q  158 ggaccaataacatatttaaccctta 182  Q
    ||||||| |||||||||||||||||    
T  19353139 ggaccaaaaacatatttaaccctta 19353163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 31093400 - 31093523
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||  | |||||   |||||||||| |||    
T  31093400 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt-ttcaaaatcgcgcaaaatgtaggga 31093498  T
Q  161 ccaataacatatttaacccttattt 185  Q
    |||| ||||||||||||||||||||    
T  31093499 ccaaaaacatatttaacccttattt 31093523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 4187801 - 4187928
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||||||||||| | ||||  |||||||   |||||||  |||||||||||| ||||||||||||||||||||||||| ||||| |   ||||||    
T  4187801 aatttgacggcagggaccaattgtagtaacggaaagaaaatgtgaggattttaaaaatatttattgaaatgtaaggactattatttaaagttgcgcaaaa 4187900  T
Q  153 tgtaaggaccaataacatatttaaccct 180  Q
    |||| |||| || |||||||||||||||    
T  4187901 tgtagggactaaaaacatatttaaccct 4187928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 181
Target Start/End: Complemental strand, 14625232 - 14625119
Alignment:
Q  67 gactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaata 166  Q
    |||||||| || ||||||| ||||||||||||||||||||||||||||||| |||| || |||||| || |||||||   | |||||||| ||||||| |    
T  14625232 gactatttatgataacggaggaaaaatgtagggattttaaaaacatttattaaaatttatggacta-tatttaaaattgcgtaaaatgtagggaccaaaa 14625134  T
Q  167 acatatttaaccctt 181  Q
    |||||||||||||||    
T  14625133 acatatttaaccctt 14625119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 3192204 - 3192328
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||  | |||||    |||||| || |||    
T  3192204 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaatcgcacaaaatataggga 3192302  T
Q  161 ccaataacatatttaacccttatttt 186  Q
    |||| |||||||||||||||| ||||    
T  3192303 ccaaaaacatatttaacccttttttt 3192328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 3878897 - 3878768
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | ||||||| |||||||||||||||||||||||||||||||||||||| |  | |||||   ||||||    
T  3878897 aatttgacaacagggactatttacactaactcaggaaaaatatagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaa 3878798  T
Q  153 tgtaaggaccaataacatatttaaccctta 182  Q
     ||| ||||||| |||||||||||||||||    
T  3878797 cgtagggaccaaaaacatatttaaccctta 3878768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 177
Target Start/End: Original strand, 21949823 - 21949919
Alignment:
Q  80 aacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||   | |||||||| ||||||| |||||| |||||    
T  21949823 aacgaatgaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-cttaaaatcgcgtaaaatgtagggaccaaaaacataattaac 21949919  T

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Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 176
Target Start/End: Original strand, 30351667 - 30351792
Alignment:
Q  51 ataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaa 150  Q
    ||||||| || ||||||||||||| |||||||  |  ||||||||||| |||||||||| ||||||||||||||| ||||||||  |||||    || ||    
T  30351667 ataatttaacagcagggactatttatgctaacaaaataaaaatgtaggaattttaaaaatatttattgaaatgtagggactattctttaaaggagggtaa 30351766  T
Q  151 aatgtaaggaccaataacatatttaa 176  Q
    |||||| ||| |||||||||||||||    
T  30351767 aatgtagggatcaataacatatttaa 30351792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 28641251 - 28641152
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacccttatttt 186  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||  | |||||   | |||||||| ||||||| |||||||||||||||| ||||    
T  28641251 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattatt-ctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaacccttttttt 28641153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 31162851 - 31162942
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  | |||||   | |||||||| ||||||| ||||||||||||||    
T  31162851 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggattatt-ctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccc 31162942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 18999641 - 18999732
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    |||||||  |||||||||||| ||||| ||||||||| ||||||||  | ||||||| ||||||||||||||| || |||||||||||||||    
T  18999641 aaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaaaatgaagcaaaatgtaaggactaaaaacatatttaaccct 18999732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 31093120 - 31092993
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | |||||||||||||||||||||||||| ||||||||||||||||||| |  | |||||   ||||||    
T  31093120 aatttgacaacagggactatttacactaactcaagaaaaatgtagggattttaaaaacatctattgaaatgtaaggactaattctcaaaatcgtgcaaaa 31093021  T
Q  153 tgtaaggaccaataacatatttaaccct 180  Q
     ||  ||||||| |||||||||||||||    
T  31093020 cgttgggaccaaaaacatatttaaccct 31092993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 172
Target Start/End: Original strand, 119786 - 119868
Alignment:
Q  90 aaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatat 172  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  | ||| | | ||||||| |||||||||| |||||||    
T  119786 aaatgtagggattttaaaaacatttattgaaatgcaaggactattcttcaaagtcacgcaaaatataaggaccaaaaacatat 119868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 19352562 - 19352515
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19352562 gaaaaatgtagggattttaaaaacatttattgaaatgcaaggactatt 19352515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 5746851 - 5746758
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||  | |||||   | |||||||| ||||||| ||||||||||||||||    
T  5746851 gaaaaatgtagggatttttaaaacatttattgaaatgtagggattatt-ctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccctt 5746758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 6543845 - 6543937
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||  | |||||   | ||||||| |||||||| ||||||||||||||||    
T  6543845 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattatt-ctcaaaatcgcgtaaaatgt-aggaccaaaaacatatttaaccctt 6543937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 4186853 - 4186752
Alignment:
Q  79 taacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||| | ||||||  | ||| |   || ||||||| ||| |||||||||||||||||    
T  4186853 taacggagcaaaaatgtagggatattaaaaacatttattgaaatgtaggtactattcttcaaagtcgtgctaaatgtagggatcaataacatatttaacc 4186754  T
Q  179 ct 180  Q
    ||    
T  4186753 ct 4186752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 3406692 - 3406731
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3406692 tagggattttaaaaacatttattgaaatgtaaggactatt 3406731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 30350725 - 30350646
Alignment:
Q  54 atttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactat 133  Q
    |||||| || |||||||||||||  |||||||  |||||| |||| |||||||||| ||||||||||||||| |||||||    
T  30350725 atttgagggtagggactatttgtcgtaacggaataaaaatataggaattttaaaaatatttattgaaatgtagggactat 30350646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 179
Target Start/End: Original strand, 3879177 - 3879294
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||| ||||||||||||||||||| ||||||||||| ||| ||||  | |||||   |||||||||| |||    
T  3879177 ggcagggaccaattgcactaacggagaaaaaatatagggattttaaaaacattcattgaaatgtagggattatt-ctcaaaatcgcgcaaaatgtaggga 3879275  T
Q  161 ccaataacatatttaaccc 179  Q
    |||| || |||||||||||    
T  3879276 ccaaaaatatatttaaccc 3879294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 18339314 - 18339392
Alignment:
Q  102 tttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    |||||||||||||||| ||||||||||| ||||  | ||||| | | |||||||||||||||| || ||||||||||||    
T  18339314 tttaaaaacatttattaaaatgtaaggattattcttcaaaataacgtaaaatgtaaggaccaaaaatatatttaaccct 18339392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 8648056 - 8648155
Alignment:
Q  79 taacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    |||||||  ||||||||  |||||||||||| ||||| |||||||||| |||||||  |  ||| || ||||||||||||||| || | |||||||||||    
T  8648056 taacggagaaaaaatgtgaggattttaaaaatatttaatgaaatgtaaagactattcttccaaaggacgcaaaatgtaaggactaaaatcatatttaacc 8648155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 31176586 - 31176503
Alignment:
Q  99 gattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctta 182  Q
    ||||||||||||||||| ||||||||| ||||| ||  | |||  || ||||||| ||||||| || |||||||||||||||||    
T  31176586 gattttaaaaacatttaatgaaatgtatggactgttcttcaaagggacgcaaaatataaggactaaaaacatatttaaccctta 31176503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 18999446 - 18999365
Alignment:
Q  98 ggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaataacatatttaaccc 179  Q
    |||||||||||| ||||| ||||||||| ||||||||  | |||| ||| ||||||||||||||| || ||||||||||||||    
T  18999446 ggattttaaaaatatttaatgaaatgtatggactattcttcaaaa-gagtgcaaaatgtaaggactaaaaacatatttaaccc 18999365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 31588320 - 31588438
Alignment:
Q  62 gcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaa-atgaggcaaaatgtaagga 160  Q
    |||||||||| || || |||||||   |||||||  |||||||||||| ||||| ||||||||| ||||||||  | |||   || ||||||||||||||    
T  31588320 gcagggactaattttgataacggagataaaatgttaggattttaaaaatatttaatgaaatgtagggactattcttcaaaggggacgcaaaatgtaagga 31588419  T
Q  161 ccaataacatatttaaccc 179  Q
    | || ||||||||||||||    
T  31588420 ctaaaaacatatttaaccc 31588438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 87262 - 87350
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    |||||||  |||||||||||||||||| ||||||||| ||||||||  | |||  ||  |||||| ||||||| || ||||||||||||    
T  87262 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagggacacaaaatataaggactaaaaacatatttaac 87350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 8647358 - 8647394
Alignment:
Q  96 agggattttaaaaacatttattgaaatgtaaggacta 132  Q
    |||||||||||||||||||||||||||| ||||||||    
T  8647358 agggattttaaaaacatttattgaaatgcaaggacta 8647394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 18340661 - 18340740
Alignment:
Q  99 gattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaataacatatttaacc 178  Q
    ||||||||||||||||| ||||||||||||||||||  |||||| | | |||| |||||||||| || | |||||||||||    
T  18340661 gattttaaaaacatttaatgaaatgtaaggactatt-cttaaaaggggcgcaacatgtaaggactaaaatcatatttaacc 18340740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 37813495 - 37813419
Alignment:
Q  58 gacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    |||||||||||| | || || ||||||  ||||||| |||| |||||||||||| ||| ||||||||| ||||||||    
T  37813495 gacggcagggaccaattttgttaacggtggaaaaatttaggaattttaaaaacacttaatgaaatgtatggactatt 37813419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 16284354 - 16284275
Alignment:
Q  98 ggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    |||||||||||||||||| | |||| ||| |||||||  | ||||  | ||||||||||||||| || ||||||||||||    
T  16284354 ggattttaaaaacatttaataaaatataaagactattcttcaaaaaaacgcaaaatgtaaggactaaaaacatatttaac 16284275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 22231170 - 22231253
Alignment:
Q  98 ggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    |||||| ||||||||||| |||||| || ||||||||  |||||  |  ||||||| ||||||| || ||||||||||||||||    
T  22231170 ggatttcaaaaacatttaatgaaatatagggactattctttaaaggggcgcaaaatataaggactaaaaacatatttaaccctt 22231253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 51 - 178
Target Start/End: Complemental strand, 18443302 - 18443176
Alignment:
Q  51 ataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaa 150  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||   ||||    
T  18443302 ataatttgacagcagggactatttacgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaatcgtgcaa 18443204  T
Q  151 aatgtaaggaccaataacatatttaacc 178  Q
    |||||| ||||||| |||||||||||||    
T  18443203 aatgtagggaccaaaaacatatttaacc 18443176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 18443582 - 18443700
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  |||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||  | |||||   ||||||||||||||    
T  18443582 ggcagggaccaattgcactaacggaggaaaaatatagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgtaagga 18443680  T
Q  161 ccaataacatatttaaccct 180  Q
    |||| |||||||||||||||    
T  18443681 ccaaaaacatatttaaccct 18443700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 28898425 - 28898560
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   ||||||    
T  28898425 aatttgacaacagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaa 28898524  T
Q  153 tgtaaggaccaataacatatttaacccttattttta 188  Q
     ||| ||||||| ||||||||||||||||| |||||    
T  28898525 cgtagggaccaaaaacatatttaacccttaatttta 28898560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 884807 - 884679
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   ||||||    
T  884807 aatttgacaacagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaa 884708  T
Q  153 tgtaaggaccaataacatatttaaccctt 181  Q
     ||| ||||||| ||||||||||||||||    
T  884707 cgtagggaccaaaaacatatttaaccctt 884679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 1244136 - 1244008
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   ||||||    
T  1244136 aatttgacaacagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaa 1244037  T
Q  153 tgtaaggaccaataacatatttaaccctt 181  Q
     ||| ||||||| ||||||||||||||||    
T  1244036 cgtagggaccaaaaacatatttaaccctt 1244008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 41298335 - 41298243
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   |||||||||| ||||||| ||||||||||||||    
T  41298335 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaatgtagggaccaaaaacatatttaaccc 41298243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 182
Target Start/End: Original strand, 1244416 - 1244536
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||  | |||||   |||||||||| |||    
T  1244416 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgtaggga 1244514  T
Q  161 ccaataacatatttaaccctta 182  Q
    |||| |||||||||||||||||    
T  1244515 ccaaaaacatatttaaccctta 1244536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 33847990 - 33847863
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  |||||||||  ||||||||||||||||||||||||||||||||||||||  |||||||  | |||||   | ||||    
T  33847990 aatttgacaacagggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagagactatt-ctcaaaatcgcgtaaaa 33847892  T
Q  153 tgtaaggaccaataacatatttaaccctt 181  Q
    | || ||||||| ||||||||||||||||    
T  33847891 tatagggaccaaaaacatatttaaccctt 33847863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 182
Target Start/End: Original strand, 41298666 - 41298769
Alignment:
Q  78 ctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||  | |||||   |||||||||| ||||||| ||||||||||||    
T  41298666 ctaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 41298764  T
Q  178 cctta 182  Q
    |||||    
T  41298765 cctta 41298769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 28898145 - 28898027
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||  | |||||   |||||||||| |||    
T  28898145 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgtaggga 28898047  T
Q  161 ccaataacatatttaaccct 180  Q
    |||| |||||||||||||||    
T  28898046 ccaaaaacatatttaaccct 28898027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 181
Target Start/End: Original strand, 29784358 - 29784471
Alignment:
Q  67 gactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaata 166  Q
    ||||||||  |||||| || ||||||||||||||||||||||| |||||||||||||||| |||||||  | |||||   |||||| ||| ||||||| |    
T  29784358 gactatttacgctaacagaggaaaaatgtagggattttaaaaatatttattgaaatgtaaagactatt-ctcaaaatcgtgcaaaacgtagggaccaaaa 29784456  T
Q  167 acatatttaaccctt 181  Q
    |||||||||||||||    
T  29784457 acatatttaaccctt 29784471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 33848270 - 33848389
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  |||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||  |||||||   | |||||||| |||    
T  33848270 ggcagggaccaattgcactaacgaatgaaaaatgtaggaattttaaaaacatttattgaaatgtagggactatt-cttaaaatcgcgtaaaatgtaggga 33848368  T
Q  161 ccaataacatatttaaccctt 181  Q
     ||| |||||| |||||||||    
T  33848369 acaaaaacataattaaccctt 33848389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 28838604 - 28838525
Alignment:
Q  99 gattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    ||||||||||||||||||| ||||||||||| ||||  | ||||||| |||||||||| ||||||| |||||||||||||    
T  28838604 gattttaaaaacatttattaaaatgtaaggattatttttcaaaatgatgcaaaatgtagggaccaaaaacatatttaacc 28838525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 178
Target Start/End: Original strand, 20544145 - 20544228
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    ||||||||||||||||||||||||||||| ||||||||||  ||||| | | ||||||  || ||||||| |||||||||||||    
T  20544145 tagggattttaaaaacatttattgaaatgcaaggactattgtttaaagtcacgcaaaacttagggaccaaaaacatatttaacc 20544228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 30939563 - 30939658
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctta 182  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||||  |  |||||  | |||||||| |||| || |||||||||||||||||    
T  30939563 gaaaaatgtagggattttaaaaatatttaatgaaatgtagggactattcttcgaaatggcgtaaaatgtagggactaaaaacatatttaaccctta 30939658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 27310167 - 27310095
Alignment:
Q  58 gacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggac 130  Q
    |||||||||||| | || || ||||||  ||||||||||||||||||||||||||||| ||||||||| ||||    
T  27310167 gacggcagggaccaattttgttaacggtagaaaaatgtagggattttaaaaacatttaatgaaatgtagggac 27310095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 20544321 - 20544404
Alignment:
Q  99 gattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctta 182  Q
    ||||||||||||||||| ||||||||||||||||||  | |||| |  ||||||| ||||||| || ||||||||||| |||||    
T  20544321 gattttaaaaacatttaatgaaatgtaaggactattcttcaaaaaggtgcaaaatataaggactaaaaacatatttaatcctta 20544404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 22954136 - 22954089
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  22954136 gaaaaatgtagggattttaaaaacatttattaaaatgtagggactatt 22954089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 28852782 - 28852692
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    |||||||  |||||||||||||||||| ||||||||| ||| ||||| |||||  ||  |||||||||||||  || ||||||||||||||    
T  28852782 aaaatgtgaggattttaaaaacatttaatgaaatgtagggagtattatttaaatggacacaaaatgtaaggattaaaaacatatttaaccc 28852692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 29784051 - 29783978
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||| | |||  ||||||||  ||||||||||| ||||||||||||||||||||||| || ||||||||    
T  29784051 ggcagggaccaattgcactaacggagaaaaaatgtaggaattttaaaaacatttattgaaatatagggactatt 29783978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 17075618 - 17075710
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    |||||||  |||||||||||||||||| ||||||||| ||||||||  | |||  |  ||||||||||||||| || || |||||||||||||    
T  17075618 aaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaaagatatttaaccctt 17075710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 27311048 - 27311120
Alignment:
Q  88 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||||  |||||  |  ||||||||||||||    
T  27311048 aaaaatgtaggaattttaaaaacatttaatgaaatgtagggactattctttaaagaggcgcaaaatgtaagga 27311120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 30938685 - 30938597
Alignment:
Q  88 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaa 176  Q
    ||||||||||| |||||||||||||||| | ||||||| ||| ||||  |||||  |  ||||||||||||||| || |||||||||||    
T  30938685 aaaaatgtaggaattttaaaaacatttaataaaatgtatggattattctttaaagaggcgcaaaatgtaaggactaaaaacatatttaa 30938597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 49053719 - 49053797
Alignment:
Q  100 attttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    |||||||||||||||||||||||| || |||||||  | ||| | |  ||||||||| ||||||| |||||||||||||    
T  49053719 attttaaaaacatttattgaaatgcaatgactatttttcaaagtcacccaaaatgtatggaccaaaaacatatttaacc 49053797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 10466695 - 10466659
Alignment:
Q  98 ggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||| |||||||||||||||||||||||||||||||    
T  10466695 ggattataaaaacatttattgaaatgtaaggactatt 10466659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 11974894 - 11974975
Alignment:
Q  92 atgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    ||||||| |||||||||||||||||||||||| || ||||    ||| || | | |||||||||| ||||||| ||||||||||||    
T  11974894 atgtaggaattttaaaaacatttattgaaatgcaaagact----atttaagtcacgcaaaatgtagggaccaaaaacatatttaac 11974975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 4152840 - 4152717
Alignment:
Q  58 gacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaa 157  Q
    |||||||| ||| | || || ||||||  ||||||||||||||||||||||||||| | | ||||||| ||| ||||  |||||||   | ||| ||||     
T  4152840 gacggcagagaccaattttgttaacggtagaaaaatgtagggattttaaaaacattcaataaaatgtagggattattctttaaaattgcgtaaactgtag 4152741  T
Q  158 ggaccaataacatatttaaccctt 181  Q
    | || || ||||||||||||||||    
T  4152740 gaactaaaaacatatttaaccctt 4152717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 11974753 - 11974666
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaataacatatttaa 176  Q
    |||||||  |||||||||||||||||| |||||||||  |||||||  || ||| ||| ||||||||||||||| || | |||||||||    
T  11974753 aaaatgtgaggattttaaaaacatttaatgaaatgtacagactatt-tttcaaaggagcgcaaaatgtaaggactaaaatcatatttaa 11974666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 12933029 - 12933153
Alignment:
Q  56 ttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgt 155  Q
    ||||||||||||||||  | || |||| |||  |||||||  |||||||| ||||||||| | |||| || |||||||| || |||   |  ||||||||    
T  12933029 ttgacggcagggactaaatttggtaacagatataaaatgtgaggattttagaaacatttacttaaatatagggactatttatcaaaggaacacaaaatgt 12933128  T
Q  156 aaggaccaataacatatttaaccct 180  Q
    | |||| || |||||||||||||||    
T  12933129 agggactaaaaacatatttaaccct 12933153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 7e-33; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 40124200 - 40124074
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | ||||| | | ||||    
T  40124200 aatttgacaacagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcaagtaaaa 40124102  T
Q  153 tgtaaggaccaataacatatttaaccct 180  Q
    |||||||||||| |||||||||||||||    
T  40124101 tgtaaggaccaaaaacatatttaaccct 40124074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 32266607 - 32266481
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  || |||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  32266607 aatttgacaacaaggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaa 32266509  T
Q  153 tgtaaggaccaataacatatttaaccct 180  Q
    |||| ||||||| |||||||||||||||    
T  32266508 tgtagggaccaaaaacatatttaaccct 32266481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 47410819 - 47410944
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  47410819 aatttgacaacagggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaa 47410917  T
Q  153 tgtaaggaccaataacatatttaaccc 179  Q
    |||| ||||||| ||||||||||||||    
T  47410918 tgtagggaccaaaaacatatttaaccc 47410944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 12869623 - 12869751
Alignment:
Q  56 ttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgt 155  Q
    ||||||| ||||||||||||| ||||||||  |||||| | ||||||||||||||||||||||||||||| ||||||||  |||||    || ||||| |    
T  12869623 ttgacgggagggactatttgtcctaacggagtaaaaattt-gggattttaaaaacatttattgaaatgtagggactattctttaaaggagggtaaaatat 12869721  T
Q  156 aaggaccaataacatatttaacccttattt 185  Q
    | ||||||| ||||||||||||||||||||    
T  12869722 agggaccaaaaacatatttaacccttattt 12869751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 9122809 - 9122683
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||| ||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||  | |||||   | ||||    
T  9122809 aatttgacaacagtgactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaatcgcgtaaaa 9122711  T
Q  153 tgtaaggaccaataacatatttaaccct 180  Q
    |||  ||||||| |||||||||||||||    
T  9122710 tgtggggaccaaaaacatatttaaccct 9122683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 30427798 - 30427671
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   ||||||    
T  30427798 aatttgacaacagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaa 30427699  T
Q  153 tgtaaggaccaataacatatttaaccct 180  Q
     ||| ||||||| |||||||||||||||    
T  30427698 cgtagggaccaaaaacatatttaaccct 30427671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 45230254 - 45230128
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   ||||||    
T  45230254 aatttgacaacagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatagtgcaaaa 45230155  T
Q  153 tgtaaggaccaataacatatttaaccc 179  Q
     ||| ||||||| ||||||||||||||    
T  45230154 cgtagggaccaaaaacatatttaaccc 45230128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 17968153 - 17968034
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||  | |||||   |||||||||| |||    
T  17968153 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgtaggga 17968055  T
Q  161 ccaataacatatttaaccctt 181  Q
    |||| ||||||||||||||||    
T  17968054 ccaaaaacatatttaaccctt 17968034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 180
Target Start/End: Complemental strand, 12868578 - 12868431
Alignment:
Q  33 tctgtttgatggttgggcataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggacta 132  Q
    |||||||| || ||| | ||||||| || |||| ||||||||   ||||||||  | |||||||||||||||||||| ||||||||||||||| | ||||    
T  12868578 tctgtttggtgattgagtataatttaacagcagagactatttaccctaacggaatataaatgtagggattttaaaaatatttattgaaatgtaggaacta 12868479  T
Q  133 ttaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    ||  |||||    || |||||||| |||||||||||||||||||||||    
T  12868478 ttctttaaaggagggtaaaatgtagggaccaataacatatttaaccct 12868431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 17968433 - 17968560
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  |||||| |||||  ||||||  | |||||||||||||||||||||||||||||||||||||||| ||||| |  | |||||   ||||||    
T  17968433 aatttgacaacagggattatttacgctaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaagactaattctcaaaatcgtgcaaaa 17968532  T
Q  153 tgtaaggaccaataacatatttaaccct 180  Q
     ||| ||||||| |||||||||||||||    
T  17968533 cgtatggaccaaaaacatatttaaccct 17968560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 46802446 - 46802320
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  |||||| || |||||||||||||||||||||||| |||||||||||||| ||||||||  | |||||   | ||||    
T  46802446 aatttgacaacagggactatttacgctaacagaggaaaaatgtagggattttaaaaacttttattgaaatgtagggactatt-ctcaaaatcgcgtaaaa 46802348  T
Q  153 tgtaaggaccaataacatatttaaccct 180  Q
    |||  ||||||| |||||||||||||||    
T  46802347 tgtggggaccaaaaacatatttaaccct 46802320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 182
Target Start/End: Original strand, 45230551 - 45230654
Alignment:
Q  78 ctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    ||||||||  |||||| ||||||||||||||||||| ||||||||||| ||||||||  | |||||   |||||||||| ||||||| ||||||||||||    
T  45230551 ctaacggagaaaaaatatagggattttaaaaacattcattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgtagggaccaaaaacatatttaac 45230649  T
Q  178 cctta 182  Q
    |||||    
T  45230650 cctta 45230654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 178
Target Start/End: Original strand, 3591171 - 3591254
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||| | | ||| |||||| ||||||| |||||||||||||    
T  3591171 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcacaatgtagggaccaaaaacatatttaacc 3591254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 188
Target Start/End: Original strand, 30428078 - 30428204
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||||||| ||||||||||| | ||||||  | |||||   |||||||||| |||    
T  30428078 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtaggaactatt-ctcaaaatcgcgcaaaatgtaggga 30428176  T
Q  161 ccaataacatatttaacccttattttta 188  Q
    |||| ||||||||||||| || ||||||    
T  30428177 ccaaaaacatatttaaccttttttttta 30428204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 182
Target Start/End: Complemental strand, 45664809 - 45664683
Alignment:
Q  56 ttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatg 154  Q
    ||||||| || |||||||| || |||||||  |||||||| ||||||||||||||||||||| |||||||  |||||||  || ||||||| | ||||||    
T  45664809 ttgacggtagagactatttttgataacggagtaaaaatgtggggattttaaaaacatttattaaaatgtagagactatt-cttcaaatgagcgtaaaatg 45664711  T
Q  155 taaggaccaataacatatttaaccctta 182  Q
    || |||| || |||||||||||||||||    
T  45664710 tagggactaaaaacatatttaaccctta 45664683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 32266913 - 32267005
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||  | |||||   | |||||||| ||||||| |||||||||||||||    
T  32266913 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattatt-ctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccct 32267005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 36793559 - 36793668
Alignment:
Q  73 ttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatat 172  Q
    |||| ||||||||  |||||||||||||||||||||||||||||| |||||||  |||||||  | ||| | | ||||||| || |||| || |||||||    
T  36793559 ttgtactaacggaataaaaatgtagggattttaaaaacatttattaaaatgtagagactattcttcaaagtcacgcaaaatatagggactaaaaacatat 36793658  T
Q  173 ttaaccctta 182  Q
    ||||||||||    
T  36793659 ttaaccctta 36793668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 182
Target Start/End: Original strand, 45665920 - 45666035
Alignment:
Q  67 gactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaat 165  Q
    |||||||| ||||||||||  ||||  |||||||||||||||| ||||||||||| ||||| ||||||  || ||| |||  ||||||||| ||||||||    
T  45665920 gactatttatgctaacggagtaaaacagtagggattttaaaaatatttattgaaacgtaagaactatt-ttttaaaggagcacaaaatgtagggaccaat 45666018  T
Q  166 aacatatttaaccctta 182  Q
    ||||||||||| |||||    
T  45666019 aacatatttaatcctta 45666035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 47410522 - 47410466
Alignment:
Q  78 ctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47410522 ctaacgaaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt 47410466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 180
Target Start/End: Original strand, 1500951 - 1501073
Alignment:
Q  58 gacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgta 156  Q
    |||||||||||  | || || ||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||||  || ||| ||| ||||||| ||    
T  1500951 gacggcagggatcaattttgttaacggtagaaaaatgtagggattttaaaaacatttaatgaaatgtagggactatt-cttcaaaagagcgcaaaatata 1501049  T
Q  157 aggaccaataacatatttaaccct 180  Q
     |||| || |||||||||||||||    
T  1501050 gggactaaaaacatatttaaccct 1501073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 8997431 - 8997384
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8997431 gaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt 8997384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 46802743 - 46802845
Alignment:
Q  78 ctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    |||||| | ||||||||||||||||||||||||||||||| ||||||| ||||||||  | |||||     |||||||| ||||||| ||||||||||||    
T  46802743 ctaacgaaggaaaaatgtagggattttaaaaacatttattaaaatgtagggactatt-ttcaaaattgtataaaatgtagggaccaaaaacatatttaac 46802841  T
Q  178 cctt 181  Q
    ||||    
T  46802842 cctt 46802845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 5172834 - 5172742
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    |||||||| |||||||||||||||||| |||||||||  |||||||  || ||||||| |||||||||||| || || ||||||||||||||||    
T  5172834 aaaatgtaaggattttaaaaacatttaatgaaatgtagagactatt-cttcaaatgagcgcaaaatgtaagaactaaaaacatatttaaccctt 5172742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 9123115 - 9123215
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacccttatttt 186  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||  | |||||     |||||||| ||||||| ||||||||||||| || ||||    
T  9123115 gaaaaatgtagggattttaaaaacatttattgaaatgtagagactatt-ctcaaaattgcataaaatgtagggaccaaaaacatatttaacctttttttt 9123213  T
Q  187 ta 188  Q
    ||    
T  9123214 ta 9123215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 40124506 - 40124598
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||  | |||||   | |||||||| ||||||| || ||||||||||||    
T  40124506 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattatt-ctcaaaatcgcgtaaaatgtagggaccaaaaatatatttaaccct 40124598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 9880573 - 9880474
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacccttattttta 188  Q
    |||||||  |||||||||||||||||| |||||||||  |||| ||  | |||  || ||||||||||||||| || ||||||||||||||||| |||||    
T  9880573 aaaatgtgaggattttaaaaacatttaatgaaatgtagagacttttcttcaaagggatgcaaaatgtaaggactaaaaacatatttaacccttactttta 9880474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 8998200 - 8998264
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttatt 117  Q
    |||||||| |||| ||||||||  ||||||| | ||||| |||||||||||||||||||||||||    
T  8998200 aatttgacagcagagactatttacgctaacgaaggaaaactgtagggattttaaaaacatttatt 8998264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 36792344 - 36792237
Alignment:
Q  73 ttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatat 172  Q
    |||| ||||||||  ||||||||||||||||||||| ||||||||||||| || ||| ||||  | ||||| | |||||||||| | ||  | |||||||    
T  36792344 ttgtactaacggagtaaaaatgtagggattttaaaa-catttattgaaatatagggattattcttgaaaatcacgcaaaatgtaggaacttaaaacatat 36792246  T
Q  173 ttaaccctt 181  Q
    |||||||||    
T  36792245 ttaaccctt 36792237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 3591338 - 3591428
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaataacatatttaaccc 179  Q
    |||||||  |||||||||||||||||| | ||||||| ||||||||  || ||||||| ||||||||||||||| || || |||||||||||    
T  3591338 aaaatgtgaggattttaaaaacatttaataaaatgtatggactatt-cttcaaatgagcgcaaaatgtaaggactaaaaatatatttaaccc 3591428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 181
Target Start/End: Original strand, 5683571 - 5683654
Alignment:
Q  98 ggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    |||||||||||| ||||| ||||||||| ||||||||  | |||| || | ||||| ||||||| || ||||||||||||||||    
T  5683571 ggattttaaaaatatttaatgaaatgtagggactattcttcaaaaagacgtaaaatataaggactaaaaacatatttaaccctt 5683654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 19895656 - 19895573
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    ||||||||||||||||||||||||||||| || |||||||  | ||| | | ||||||| ||  |||||| |||||||||||||    
T  19895656 tagggattttaaaaacatttattgaaatgcaaagactatttttcaaagtcacgcaaaatatagagaccaaaaacatatttaacc 19895573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 5683413 - 5683335
Alignment:
Q  99 gattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    ||||||||||||||||||||||||| |||||| |||  | ||| | | ||||||||||  ||||||||| |||||||||    
T  5683413 gattttaaaaacatttattgaaatgcaaggacaatttttcaaattcacgcaaaatgtagagaccaataatatatttaac 5683335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 1500150 - 1500093
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatg 144  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||||||||  ||||||||    
T  1500150 gaaaaatatagggattttaaaaacattcaatgaaatgtagggactattctttaaaatg 1500093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 5683250 - 5683161
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    |||||||  |||||||||| ||||||| ||||||||| ||||||||  | |||  || ||||||||||||||  || |||||||||||||    
T  5683250 aaaatgtgaggattttaaatacatttaatgaaatgtagggactatttttcaaagagacgcaaaatgtaaggattaaaaacatatttaacc 5683161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 6751354 - 6751447
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatga-ggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    |||||||  |||||||||||| ||||| ||||||||||||||| ||  |||||  || | |||||||||| ||| || ||||||||||||||||    
T  6751354 aaaatgtgaggattttaaaaaaatttaatgaaatgtaaggacttttctttaaagggacgccaaaatgtaatgactaaaaacatatttaaccctt 6751447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 37717797 - 37717842
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||||    
T  37717797 aaaaagtaaggattttaaaaacctttattgaaatgtaaggactatt 37717842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 31436395 - 31436483
Alignment:
Q  100 attttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacccttattttta 188  Q
    |||||||||||||||| | |||| ||  |||||||  | |||| ||  |||||||||||||| || | |||||||||||||||||||||    
T  31436395 attttaaaaacatttaataaaatatagtgactattcttcaaaaggacacaaaatgtaaggactaaaatcatatttaacccttattttta 31436483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 50359290 - 50359357
Alignment:
Q  111 atttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    ||||||||||||||||||||||||  | ||| | | ||| |||||| ||||||| |||||||||||||    
T  50359290 atttattgaaatgtaaggactatttttcaaagtcacgcagaatgtagggaccaaaaacatatttaacc 50359357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 31889519 - 31889481
Alignment:
Q  93 tgtagggattttaaaaacatttattgaaatgtaaggact 131  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  31889519 tgtagggattttaaaaacgtttattgaaatgtagggact 31889481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 17337993 - 17337960
Alignment:
Q  155 taaggaccaataacatatttaacccttattttta 188  Q
    |||||||||| |||||||||||||||||||||||    
T  17337993 taaggaccaaaaacatatttaacccttattttta 17337960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 50359440 - 50359532
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    |||||||  |||||||||||||||||| ||||||  ||||||||||  || ||||| | ||||||||||||||  |  ||||||||||||||||    
T  50359440 aaaatgtgaggattttaaaaacatttaatgaaataaaaggactatt-cttcaaatgggcgcaaaatgtaaggaatataaacatatttaaccctt 50359532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 48155053 - 48155017
Alignment:
Q  98 ggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    |||||||||||||||||| | ||||||||||||||||    
T  48155053 ggattttaaaaacatttaataaaatgtaaggactatt 48155017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 180
Target Start/End: Original strand, 29917501 - 29917629
Alignment:
Q  51 ataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaa 150  Q
    |||||||||| ||| |||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||  | |||||   ||||    
T  29917501 ataatttgacagcaaggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt-ctcaaaatcgtgcaa 29917599  T
Q  151 aatgtaaggaccaataacatatttaaccct 180  Q
    |||||| ||||||| |||||||||||||||    
T  29917600 aatgtagggaccaaaaacatatttaaccct 29917629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 4624484 - 4624358
Alignment:
Q  54 atttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaat 153  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||  | |||    || |||||    
T  4624484 atttgacagcagggactatttgtgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaaagacgatttgtcaaaggagggaaaaat 4624385  T
Q  154 gtaaggaccaataacatatttaaccct 180  Q
    ||| | ||||| |||||||||||||||    
T  4624384 gtaggcaccaaaaacatatttaaccct 4624358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 4624623 - 4624529
Alignment:
Q  88 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctta 182  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||  | ||| | | ||||||| |||||||||| |||||||||||||||||    
T  4624623 aaaaatgtagggattttaaaaacatttattgaaatgtaaagactattcttcaaagtcatgcaaaatataaggaccaaaaacatatttaaccctta 4624529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 36155432 - 36155270
Alignment:
Q  17 tatgccacgtaaacactctgtttgatggttgggcataatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttat 116  Q
    |||||||||| | || |||||||| ||  |||| | || |||||||| |||||||||  || |||||||  ||||||||| |||||||||||||||||||    
T  36155432 tatgccacgtcagcattctgtttggtgactgggaagaaattgacggcggggactattaatgataacggagtaaaaatgtaaggattttaaaaacatttat 36155333  T
Q  117 tgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    | ||||||| ||||||||| | ||| |    ||||||||| ||||||||| ||||||||||||    
T  36155332 taaaatgtagggactattattcaaagtcgcacaaaatgtagggaccaatagcatatttaaccc 36155270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 20682894 - 20683022
Alignment:
Q  58 gacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaa 157  Q
    ||||||| |||| | |||| ||||||||  |||||||| | ||||||||||||||||||| |||||||||||| |||  |||||||   || |||||||     
T  20682894 gacggcaaggaccaattgtactaacggagtaaaaatgtggagattttaaaaacatttattaaaatgtaaggaccattctttaaaatcgcgctaaatgtag 20682993  T
Q  158 ggaccaataacatatttaacccttatttt 186  Q
    |||||||||||||||||||| || |||||    
T  20682994 ggaccaataacatatttaactctaatttt 20683022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 188
Target Start/End: Complemental strand, 12734289 - 12734163
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||| ||| ||||||||||| ||||||||  | |||||   |||||||||| |||    
T  12734289 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaatattcattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgtaggga 12734191  T
Q  161 ccaataacatatttaacccttattttta 188  Q
    |||| ||||||||||||||| |||||||    
T  12734190 ccaaaaacatatttaaccctaattttta 12734163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 44024481 - 44024398
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    ||||||||||||||| ||||||||||||||||||||||||  | ||| | | |||||||||||||||||| |||||||||||||    
T  44024481 tagggattttaaaaatatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaacc 44024398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 12734569 - 12734691
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    |||||||| |||||||||||||   |||||  | ||||||||||||||||||||||||||||||||||||||||| |||| |  | |||||   ||||||    
T  12734569 aatttgacagcagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaagaactaattctcaaaatcgtgcaaaa 12734668  T
Q  153 tgtaaggaccaataacatattta 175  Q
     ||| ||||||| ||||||||||    
T  12734669 cgtagggaccaaaaacatattta 12734691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 182
Target Start/End: Complemental strand, 29917221 - 29917101
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   |||||| ||| |||    
T  29917221 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgcaaaacgtaggga 29917123  T
Q  161 ccaataacatatttaaccctta 182  Q
     ||| |||||||||||||||||    
T  29917122 tcaaaaacatatttaaccctta 29917101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 178
Target Start/End: Original strand, 21005956 - 21006039
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||   | |||||||||| ||||||| |||||||||||||    
T  21005956 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagccacgcaaaatgtagggaccaaaaacatatttaacc 21006039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 24846060 - 24846006
Alignment:
Q  80 aacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    |||||| ||||||| |||| |||||||||||||||||||||||||||||||||||    
T  24846060 aacggaggaaaaatataggaattttaaaaacatttattgaaatgtaaggactatt 24846006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 12489528 - 12489616
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    |||||||| |||||||||||||||| || |||||||||||||||||  | | || || ||||||||||||||| || |||||||||||||    
T  12489528 aaaatgtaaggattttaaaaacattaat-gaaatgtaaggactattcttcataacgacgcaaaatgtaaggactaaaaacatatttaacc 12489616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 6298011 - 6298127
Alignment:
Q  64 agggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggacca 163  Q
    |||||||| || || |||||||   |||||||  |||||||||||||||||| ||||||||||||||||||  | |||  || |||||||||||| || |    
T  6298011 agggactaattttgataacggaaataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaagggaagcaaaatgtaagcacta 6298110  T
Q  164 ataacatatttaaccct 180  Q
    | |||| ||||||||||    
T  6298111 aaaacacatttaaccct 6298127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 13315281 - 13315201
Alignment:
Q  99 gattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    ||||||||||||||||| ||||||||| ||||||||  |||||  |  ||||||||||||||| || ||||||||||||||    
T  13315281 gattttaaaaacatttaatgaaatgtagggactattctttaaatgggcgcaaaatgtaaggactaaaaacatatttaaccc 13315201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 44148699 - 44148621
Alignment:
Q  56 ttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||| ||||||||||| || |||||||  ||||||||  ||||||||||||| |||||| ||||||| ||||||||    
T  44148699 ttgacggtagggactatttttgataacggagtaaaaatgtgaggattttaaaaacgtttattaaaatgtagggactatt 44148621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 10047734 - 10047653
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaa 176  Q
    ||||||||||||||||||||| ||||||| ||||||||||  | | ||| | ||||||||||  |||||| |||||||||||    
T  10047734 tagggattttaaaaacatttagtgaaatgcaaggactatttttcagaatcatgcaaaatgtagagaccaaaaacatatttaa 10047653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 187
Target Start/End: Original strand, 26997843 - 26997968
Alignment:
Q  62 gcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggac 161  Q
    |||||||||| || || |||||||   |||||||  |||||||||||| | ||| ||||||||| ||||||||  | |||  || |||||||||||| ||    
T  26997843 gcagggactaattttgataacggagataaaatgtgaggattttaaaaataattaatgaaatgtatggactattcttcaaatggacgcaaaatgtaagaac 26997942  T
Q  162 caataacatatttaacccttattttt 187  Q
     || ||||||||||||||| ||||||    
T  26997943 taaaaacatatttaaccctaattttt 26997968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 16682621 - 16682533
Alignment:
Q  88 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaa 176  Q
    ||||||||| | ||||||||||||||| ||||||||||| |||||||  ||||| |   ||||||| ||| |||||| |||||||||||    
T  16682621 aaaaatgtaagaattttaaaaacattttttgaaatgtaatgactattctttaaagtcgcgcaaaatataatgaccaaaaacatatttaa 16682533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 4694434 - 4694524
Alignment:
Q  90 aaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaataacatatttaaccct 180  Q
    |||||||||||||||||||||||||| | ||||||| |||||||| || |||| ||| | ||||| || |||| || |||||||||||||||    
T  4694434 aaatgtagggattttaaaaacatttacttaaatgtagggactatttatcaaaa-gagcgtaaaatatagggactaaaaacatatttaaccct 4694524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 6297863 - 6297954
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||  | ||| | | |||||||||| |||| || |||||| ||| ||||    
T  6297863 aaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaagtcacgcaaaatgtagggacgaaaaacataattatccct 6297954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 26720411 - 26720317
Alignment:
Q  88 aaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaataacatatttaaccctta 182  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||||||  || ||| ||| |||||||||| |||| || || |||||||| |||||    
T  26720411 aaaaatgtagggattttaaaaatatttaatgaaatgtagggactatt-cttcaaaggagcgcaaaatgtagggactaaaaatatatttaatcctta 26720317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 36156359 - 36156458
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagg-accaataacatatttaacccttattttt 187  Q
    |||||||| |||||||||||||||||||||||||| || |||||||| | ||| |     ||||| ||||| ||||| ||||||||||||||||| ||||    
T  36156359 aaaatgtaaggattttaaaaacatttattgaaatgcaaagactattattcaaagtcgcataaaatataaggaaccaaaaacatatttaacccttaatttt 36156458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 11089133 - 11089211
Alignment:
Q  99 gattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    ||||||||||||||||||||||||||||| ||||||  | ||| | |   |||||||| ||||||| ||||||||||||    
T  11089133 gattttaaaaacatttattgaaatgtaagaactatttttcaaagtcacataaaatgtatggaccaaaaacatatttaac 11089211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 9800344 - 9800432
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    |||||||| |||||||||||||||||| |||||| || ||||||||  | |||  |  |||||||| ||||||||| || |||||||||    
T  9800344 aaaatgtaaggattttaaaaacatttaatgaaatatatggactattcttcaaaggggcgcaaaatgcaaggaccaaaaatatatttaac 9800432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 17914286 - 17914190
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacccttattt 185  Q
    |||||||  |||||||||||||||||| | ||||||| ||||||||  | |||  || ||||||||||| |||  | ||||||||||||||| ||||    
T  17914286 aaaatgtgaggattttaaaaacatttaataaaatgtagggactattcttcaaagagacgcaaaatgtaaagacttaaaacatatttaaccctaattt 17914190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 126
Target Start/End: Complemental strand, 6297718 - 6297687
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaa 126  Q
    ||||||||||||||||||||||||||||||||    
T  6297718 tagggattttaaaaacatttattgaaatgtaa 6297687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 20682787 - 20682752
Alignment:
Q  99 gattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20682787 gattttaaaaacatttattaaaatgtaaggactatt 20682752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 134
Target Start/End: Original strand, 45369134 - 45369168
Alignment:
Q  100 attttaaaaacatttattgaaatgtaaggactatt 134  Q
    |||||||||||||||||||||||||||||| ||||    
T  45369134 attttaaaaacatttattgaaatgtaaggattatt 45369168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 22601587 - 22601542
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    |||||||| | |||||||||||||||||| ||||||| ||||||||    
T  22601587 aaaatgtaagaattttaaaaacatttatttaaatgtagggactatt 22601542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 40304806 - 40304674
Alignment:
Q  56 ttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatg 154  Q
    ||||||||||||||||  | || |||| |||  |||||||  |||||||||||| ||||| | ||||||| |||||||| | | ||| ||| ||||||||    
T  40304806 ttgacggcagggactaaatttggtaacagatataaaatgtgaggattttaaaaatatttacttaaatgtatggactattta-tcaaaggagtgcaaaatg 40304708  T
Q  155 taaggaccaataacatatttaacccttattttta 188  Q
    || |||| || || ||||||||||| ||| ||||    
T  40304707 tagggactaaaaatatatttaacccatatattta 40304674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 10047556 - 10047477
Alignment:
Q  100 attttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    |||||||||||||||| |||| |||| ||||||||  | |||| |  ||||||||||||||  || |||||||||||||||    
T  10047556 attttaaaaacatttaatgaa-tgtagggactattcttcaaaagggcgcaaaatgtaaggattaaaaacatatttaaccct 10047477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 16662483 - 16662558
Alignment:
Q  100 attttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaataacatattta 175  Q
    |||||||||||||||| ||||||||| | ||||||  || ||| ||| ||||||||||||||| || ||||||||||    
T  16662483 attttaaaaacatttaatgaaatgtaggaactatt-cttcaaaagagcgcaaaatgtaaggactaaaaacatattta 16662558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 20824288 - 20824163
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  20824288 aatttgacaacagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgtgtaaaa 20824190  T
Q  153 tgtaaggaccaataacatatttaaccc 179  Q
    |||| ||||||| ||||||||||||||    
T  20824189 tgtagggaccaaaaacatatttaaccc 20824163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 14257271 - 14257145
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  14257271 aatttgacaacagggactatttacgctaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaa 14257173  T
Q  153 tgtaaggaccaataacatatttaaccct 180  Q
    |||| ||||||| |||||||||||||||    
T  14257172 tgtagggaccaaaaacatatttaaccct 14257145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 15147842 - 15147715
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||  |  ||||   | ||||    
T  15147842 aatttgacaacagggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtagggattatt-ctctaaatcgcgtaaaa 15147744  T
Q  153 tgtaaggaccaataacatatttaaccctt 181  Q
    |||| ||||||| ||||||||||||||||    
T  15147743 tgtagggaccaaaaacatatttaaccctt 15147715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 14712913 - 14712830
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||| ||| |||||||||| ||||||| |||||||||||||    
T  14712913 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagtgacgcaaaatgtagggaccaaaaacatatttaacc 14712830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 6162369 - 6162288
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||  || |||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  6162369 aatttgacaacatggactatttacgctaacggaggaaaaatgtagggattttaaaaacatttattgaaatgtaatgactatt 6162288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 19595650 - 19595742
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||||||  |||||| |  |||||||||| |||| |||||||||||||||||||    
T  19595650 aaaatatagggattttaaaaatatttattgaaatgtagggactattctttaaaaaggtgcaaaatgtatggactaataacatatttaaccctt 19595742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 33107334 - 33107453
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||  | |||||   |||||||||| |||    
T  33107334 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacattcattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgtaggga 33107432  T
Q  161 ccaataacatatttaaccctt 181  Q
    |||| ||||||||||||||||    
T  33107433 ccaaaaacatatttaaccctt 33107453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 33107054 - 33106931
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||   |||||  | |||||||||||||||||||||||||||||||||||||||||||||| |  | |||||   ||||||    
T  33107054 aatttgacaacagggactatttacactaactcaggaaaaatgtagggattttaaaaacatttattgaaatgtaaggactaattctcaaaatcgtgcaaaa 33106955  T
Q  153 tgtaaggaccaataacatatttaa 176  Q
     ||| ||||||| |||||||||||    
T  33106954 cgtagggaccaaaaacatatttaa 33106931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 20228200 - 20228325
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    |||||||| |||||||||||||  |||||| || ||||||||||||||||||||||||||||||| ||||||| | ||||||  | |||||   | |||     
T  20228200 aatttgacagcagggactatttacgctaacagaggaaaaatgtagggattttaaaaacatttattaaaatgtaggaactatt-ctcaaaattgtgaaaat 20228298  T
Q  153 tgtaaggaccaataacatatttaaccc 179  Q
    || | ||||||||||||||||||||||    
T  20228299 tgcagggaccaataacatatttaaccc 20228325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 22122184 - 22122309
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    |||||||| |||||||||||||  |||||| || ||||||||||||||||||||||||||||||| ||||||| | ||||||  | |||||   | |||     
T  22122184 aatttgacagcagggactatttacgctaacagaggaaaaatgtagggattttaaaaacatttattaaaatgtaggaactatt-ctcaaaattgtgaaaat 22122282  T
Q  153 tgtaaggaccaataacatatttaaccc 179  Q
    || | ||||||||||||||||||||||    
T  22122283 tgcagggaccaataacatatttaaccc 22122309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 6162661 - 6162776
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  ||||||||||||||||||||||||||||||||||||||  |||||||  | |||||   |||||||||| |||    
T  6162661 ggcagggaccaattgcactaacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagagactatt-ctcaaaatcgcgcaaaatgtaggga 6162759  T
Q  161 ccaataacatatttaac 177  Q
    |||| ||||||||||||    
T  6162760 ccaaaaacatatttaac 6162776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 34984518 - 34984636
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaagga 160  Q
    ||||||||| | |||  ||||||||  ||||||||||| |||||||||||||||||||||||||| ||||||||  | |||||   |||||||||| |||    
T  34984518 ggcagggaccaattgcactaacggagaaaaaatgtagg-attttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgcaaaatgtaggga 34984615  T
Q  161 ccaataacatatttaaccctt 181  Q
    |||| ||||||||||||||||    
T  34984616 ccaaaaacatatttaaccctt 34984636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 182
Target Start/End: Original strand, 20522127 - 20522249
Alignment:
Q  59 acggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaag 158  Q
    |||| |||||||| || ||  |||||| | ||||||||| ||||||||||||||||||||||||||| ||||||||  | |||||  | ||||||||| |    
T  20522127 acggtagggactaattttgtaaacggaggtaaaatgtagtgattttaaaaacatttattgaaatgtagggactattcttcaaaat-cgtcaaaatgtagg 20522225  T
Q  159 gaccaataacatatttaaccctta 182  Q
     ||||| |||||||||||||||||    
T  20522226 aaccaaaaacatatttaaccctta 20522249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 20824594 - 20824687
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||  | |||||   | |||||||| ||||||| ||||||||||||||||    
T  20824594 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattatt-ctcaaaatcgcgtaaaatgtagggaccaaaaacatatttaaccctt 20824687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 14257551 - 14257624
Alignment:
Q  61 ggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||| | |||  |||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14257551 ggcagggaccaattgcactaacgaaggaaaaatgtagggattttaaaaacatttattgaaatgtagggactatt 14257624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 15148148 - 15148240
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||| || |||||   | ||||| || ||||||| |||||||||||||||    
T  15148148 gaaaaatgtagggattttaaaatcatttattgaaatgtagggactatt-atcaaaattgcgtaaaatatagggaccaaaaacatatttaaccct 15148240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 19579203 - 19579295
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctt 181  Q
    ||||| ||||||||||||||||||||||||||||| |  |||||||  |||||| |  |||||||||| |||| ||||| |||||||||||||    
T  19579203 aaaatatagggattttaaaaacatttattgaaatgcagagactattctttaaaaaggtgcaaaatgtatggactaataatatatttaaccctt 19579295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 8710341 - 8710432
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||  | |||  |  ||||||| ||||||| || |||||||||||||||    
T  8710341 aaaatgtggggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaaccct 8710432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 5974100 - 5974009
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||  | |||  |  ||||||| ||||||| || |||||||||||||||    
T  5974100 aaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggtgcaaaatataaggactaaaaacatatttaaccct 5974009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 177
Target Start/End: Original strand, 7645956 - 7646071
Alignment:
Q  62 gcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaagga 160  Q
    |||||||||| || || |||||||   |||||||  | ||||| |||||||||||||||||||||||||||||  || ||| |||  |||||||||||||    
T  7645956 gcagggactaattttgataacggagataaaatgtgagaatttttaaaacatttattgaaatgtaaggactatt-cttcaaaggagcacaaaatgtaagga 7646054  T
Q  161 ccaataacatatttaac 177  Q
    | || ||||||||||||    
T  7646055 ctaaaaacatatttaac 7646071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 20521284 - 20521229
Alignment:
Q  79 taacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||| ||||| |||||||||||||||||||||| ||||||| || ||||||||    
T  20521284 taacggaggaaaattgtagggattttaaaaacattttttgaaatatagggactatt 20521229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 180
Target Start/End: Complemental strand, 4510268 - 4510186
Alignment:
Q  98 ggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccct 180  Q
    |||||||||||||||||| ||||||||| ||||||||  | |||  |  | ||||||||||||| || |||||||||||||||    
T  4510268 ggattttaaaaacatttaatgaaatgtagggactattcttcaaataggcgtaaaatgtaaggactaaaaacatatttaaccct 4510186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 8709601 - 8709640
Alignment:
Q  95 tagggattttaaaaacatttattgaaatgtaaggactatt 134  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  8709601 tagggattttaaaaacagttattaaaatgtaaggactatt 8709640  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 17157856 - 17157924
Alignment:
Q  111 atttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccc 179  Q
    ||||| ||||||||| ||||||||  | ||| ||  ||||||||||||||| || ||||||||||||||    
T  17157856 atttaatgaaatgtagggactattcttcaaagtggcgcaaaatgtaaggactaaaaacatatttaaccc 17157924  T

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Target: scaffold0085 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 181
Target Start/End: Original strand, 39817 - 39944
Alignment:
Q  53 aatttgacggcagggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaa 152  Q
    ||||||||  ||||||||||||  ||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||  | |||||   | ||||    
T  39817 aatttgacaacagggactatttacgctaacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtagggactatt-ctcaaaatcgcgtaaaa 39915  T
Q  153 tgtaaggaccaataacatatttaaccctt 181  Q
    |||| ||||||| ||||||||||||||||    
T  39916 tgtagggaccaaaaacatatttaaccctt 39944  T

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Target: scaffold0085; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 39511 - 39417
Alignment:
Q  87 gaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaaccctta 182  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||  | |||||     |||||||| ||||||| |||||||||||||||||    
T  39511 gaaaaatgtagggattttaaaaacatttattgaaatgtagggattatt-ctcaaaatcgcataaaatgtagggaccaaaaacatatttaaccctta 39417  T

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Target: scaffold0009 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 107974 - 107895
Alignment:
Q  99 gattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaacc 178  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| | | |||||||| ||||||| |||||||||||||    
T  107974 gattttaaaaacatttattgaaatgtaaggactatttttcaaaatcacggaaaatgtagggaccaaaaacatatttaacc 107895  T

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Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 107834 - 107721
Alignment:
Q  66 ggactatttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag-gcaaaatgtaaggaccaa 164  Q
    ||||||||| || |||||||   |||||||  |||||||||||| ||||||||||||||| ||||||||  || ||| ||| ||||| ||||||| | ||    
T  107834 ggactatttttgataacggagataaaatgtgaggattttaaaaatatttattgaaatgtagggactatt-cttcaaaggagcgcaaagtgtaaggtctaa 107736  T
Q  165 taacatatttaaccc 179  Q
     ||||||||||||||    
T  107735 aaacatatttaaccc 107721  T

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Target: scaffold0063 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 34868 - 34794
Alignment:
Q  102 tttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaa 176  Q
    |||||||||||||| ||||||||| |||| |||| | |||  || ||||||| ||||||| || |||||||||||    
T  34868 tttaaaaacatttaatgaaatgtatggaccattattcaaatagacgcaaaatataaggactaaaaacatatttaa 34794  T

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Target: scaffold0063; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 35193 - 35281
Alignment:
Q  89 aaaatgtagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgaggcaaaatgtaaggaccaataacatatttaac 177  Q
    |||||||  |||||||||||||||| | | |||||||  |||||||  | |||  || ||||||||||||||| || ||||||||||||    
T  35193 aaaatgtgaggattttaaaaacattcaataaaatgtagagactattcttcaaagggacgcaaaatgtaaggactaaaaacatatttaac 35281  T

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