View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17327_low_4 (Length: 296)
Name: NF17327_low_4
Description: NF17327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17327_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 6 - 261
Target Start/End: Original strand, 3951696 - 3951947
Alignment:
| Q |
6 |
tgaacagtaaatagcaggcaatagggaatagtcagtcacacctgggaattggaccacacaacacaaggaagcattatttagcataggaaattccactata |
105 |
Q |
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| T |
3951696 |
tgaacagtaaatagcaggcaatagggaatagtc----acacctgggaattggaccacacaacacaaggaagcattatttagcataggaaattccactaca |
3951791 |
T |
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| Q |
106 |
cctacatggtcttttgatacagaatctatcagtagaataaaatcacgttatggattggactgttgctcaaggaagttttaactatccacaatcctaaggt |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
3951792 |
cctacatggtcttttgatacagaatctatcagtagaataaaatcacgttatggattggactgttgctcaagaaagttttaactatccacaatcctaaggt |
3951891 |
T |
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| Q |
206 |
gtctgagagaatgttgggtaggtactattctattccactgttaatattataatata |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
3951892 |
gtctgagagaatgttgggtaggtactattctattccaccgttaatattataatata |
3951947 |
T |
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