View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17328_high_3 (Length: 262)
Name: NF17328_high_3
Description: NF17328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17328_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 241
Target Start/End: Original strand, 21731809 - 21732033
Alignment:
| Q |
17 |
tgtgtgaaaaatgaaggagtccaaagttggaataagaatcaatgagtttggaggaaagagaagagttctgatggagaccatggaggaagaatctagcatg |
116 |
Q |
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| T |
21731809 |
tgtgtgaaaaatgaaggagtccaaagttggaataagaatcaatgagtttggaggaaagagaagagttttgatggagaccatggaggaagaatctagcatg |
21731908 |
T |
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| Q |
117 |
gatttgttgaaggtgttgtggttttgtgcagagatttaatatagaagaggttgtgttgaaaaaccttgttgtttgaaaaggtttaatgttggtgattttg |
216 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
21731909 |
gatttgttgaaggtattgtggttttgtgcagagatttaatatagaagaggttgtgttgaaaaaccttgttgtttgaaaaggtttaatgttcgtgattttg |
21732008 |
T |
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| Q |
217 |
agaatgttaaggtagaccatgtcta |
241 |
Q |
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||||||||||||||||||||||||| |
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| T |
21732009 |
agaatgttaaggtagaccatgtcta |
21732033 |
T |
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