View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17329_high_14 (Length: 251)
Name: NF17329_high_14
Description: NF17329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17329_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 46898649 - 46898415
Alignment:
| Q |
1 |
agaagatgagcagaggaatggaaaagaggagagagagttttatcagagagtgagtgaaggcctctctgctaggtagattggtgagaaagaagcaagaaag |
100 |
Q |
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| T |
46898649 |
agaagatgagcagaggaatggaaaagaggagagagagttttatcagagagtgagtgaaggcctctctgctagatagattggtgagaaagaagcaagaaag |
46898550 |
T |
|
| Q |
101 |
cagggtgaaaaatgaataaaatagtgatatcgggaacaggcaacagcaaagtaacacttttgaggcggtgactctctacatgttaatttgtacatatcaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46898549 |
cagggtgaaaaatgaataaaatagtgatatcgggaacaggcaacagcaaagtaacacttttgaggcggtgactctctacatgttaatttgtacatatcaa |
46898450 |
T |
|
| Q |
201 |
ttcatcatatatataacattgtacagtgaggcaat |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
46898449 |
ttcatcatatatataacattgtacagtgaggcaat |
46898415 |
T |
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