View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1732R-Insertion-10 (Length: 118)
Name: NF1732R-Insertion-10
Description: NF1732R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1732R-Insertion-10 |
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Alignment Details
Target: chr3 (Bit Score: 83; Significance: 9e-40; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 27472669 - 27472587
Alignment:
| Q |
9 |
ctatctaactgtattccaccctttcttctttatttggagtataaatttgtcggttcaagacatatgatcagttgtaagaaatc |
91 |
Q |
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| T |
27472669 |
ctatctaactgtattccaccctttcttctttatttggagtataaatttgtcggttcaagacatatgatcagttgtaagaaatc |
27472587 |
T |
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Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 28092570 - 28092626
Alignment:
| Q |
37 |
tttatttggagtataaatttgtcggttcaagac--atatgatcagttgtaagaaatc |
91 |
Q |
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| T |
28092570 |
tttatttggagtataaacttgtcggtacaagacatatatgatcagttgtaagaaatc |
28092626 |
T |
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