View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1732_high_9 (Length: 382)
Name: NF1732_high_9
Description: NF1732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1732_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 352; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 18 - 373
Target Start/End: Complemental strand, 7568610 - 7568255
Alignment:
| Q |
18 |
ccaactataattttccaatcaaatttcatttcctgctcaaccagccagtaaatataatgcatttcagatatatatactatataaaaagaaataccaatta |
117 |
Q |
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| T |
7568610 |
ccaactataattttccaatcaaatttcatttcctgctcaaccagccagtaaatataatgcatttcagatatatatactatataaaaagaaataccaatta |
7568511 |
T |
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| Q |
118 |
accaaaacacatatgaaaattaatgaataatgttatgaactcacaggccaaacaggttcataagaagactttccactttcccataagaaatcaaccattg |
217 |
Q |
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| T |
7568510 |
accaaaacacatatgaaaattaatgaataatgttatgaactcacaggccaaacaggttcataagaagactttccactttcccataagaaatcaaccattg |
7568411 |
T |
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| Q |
218 |
cttttagaaatccttttgtttctttctcaacaaactttgctggttctttttctttcaaaactctttcagctaaactgacattgcagatcataacaagtat |
317 |
Q |
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| T |
7568410 |
cttttagaaatccttttgtttctttctcaacaaactttgctggttctttttctttcaaaactctttcagctaaactgacattgcagatcataacaaggat |
7568311 |
T |
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| Q |
318 |
acacatgatcagccatgttgctgcaataaccaaagaactaggcttgtggttcattt |
373 |
Q |
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| T |
7568310 |
acacatgatcagccatgttgctgcaataaccaaagaactaggcttgtggttcattt |
7568255 |
T |
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