View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1732_low_39 (Length: 236)

Name: NF1732_low_39
Description: NF1732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1732_low_39
NF1732_low_39
[»] chr4 (17 HSPs)
chr4 (81-192)||(46739766-46739877)
chr4 (81-192)||(26444479-26444590)
chr4 (66-159)||(55582005-55582098)
chr4 (66-159)||(9621285-9621378)
chr4 (81-192)||(35659256-35659361)
chr4 (66-148)||(45315532-45315614)
chr4 (66-114)||(12621982-12622030)
chr4 (66-114)||(16027478-16027526)
chr4 (66-141)||(25512338-25512413)
chr4 (66-108)||(14628974-14629016)
chr4 (131-192)||(26444620-26444681)
chr4 (81-114)||(46225797-46225830)
chr4 (66-142)||(17958049-17958125)
chr4 (66-114)||(44024943-44024991)
chr4 (80-159)||(10282843-10282922)
chr4 (80-159)||(13163858-13163937)
chr4 (154-192)||(35659423-35659461)
[»] chr8 (20 HSPs)
chr8 (68-159)||(22343749-22343840)
chr8 (68-159)||(22355409-22355500)
chr8 (66-194)||(18820481-18820617)
chr8 (66-159)||(20518390-20518483)
chr8 (70-159)||(5079691-5079780)
chr8 (66-148)||(38988029-38988111)
chr8 (66-148)||(39019126-39019208)
chr8 (66-114)||(6574450-6574498)
chr8 (66-114)||(12800190-12800238)
chr8 (66-114)||(36406722-36406770)
chr8 (85-148)||(21513007-21513070)
chr8 (66-148)||(17979785-17979867)
chr8 (82-123)||(22482567-22482608)
chr8 (69-114)||(36729229-36729274)
chr8 (66-114)||(36733978-36734026)
chr8 (80-159)||(23885339-23885417)
chr8 (154-192)||(20025488-20025526)
chr8 (81-111)||(22473041-22473071)
chr8 (81-114)||(2718174-2718207)
chr8 (131-192)||(36406271-36406332)
[»] chr3 (16 HSPs)
chr3 (66-159)||(15026328-15026421)
chr3 (66-159)||(12539993-12540086)
chr3 (66-159)||(50352349-50352442)
chr3 (66-149)||(50756685-50756768)
chr3 (81-163)||(54331774-54331856)
chr3 (81-163)||(17206626-17206708)
chr3 (66-159)||(21846736-21846825)
chr3 (66-159)||(3528620-3528713)
chr3 (66-159)||(25200790-25200883)
chr3 (83-159)||(12918503-12918579)
chr3 (66-114)||(16180752-16180800)
chr3 (66-114)||(11191140-11191188)
chr3 (66-114)||(12860584-12860632)
chr3 (66-113)||(48630159-48630206)
chr3 (81-114)||(17668904-17668937)
chr3 (66-114)||(11561714-11561762)
[»] scaffold0231 (2 HSPs)
scaffold0231 (66-190)||(19196-19320)
scaffold0231 (131-183)||(19112-19164)
[»] chr6 (7 HSPs)
chr6 (66-159)||(29043981-29044074)
chr6 (66-192)||(22555746-22555881)
chr6 (66-159)||(35056064-35056157)
chr6 (80-148)||(31347056-31347124)
chr6 (80-159)||(10444888-10444967)
chr6 (154-192)||(23498479-23498517)
chr6 (131-192)||(22555911-22555972)
[»] chr2 (14 HSPs)
chr2 (66-159)||(36733125-36733218)
chr2 (66-159)||(45679150-45679243)
chr2 (66-149)||(22685441-22685524)
chr2 (66-159)||(36737278-36737371)
chr2 (66-159)||(25587981-25588073)
chr2 (66-142)||(14180829-14180905)
chr2 (131-191)||(21336977-21337037)
chr2 (66-114)||(25138584-25138632)
chr2 (66-129)||(44761823-44761886)
chr2 (66-163)||(21317115-21317211)
chr2 (81-148)||(1385234-1385301)
chr2 (154-192)||(1385181-1385219)
chr2 (66-163)||(21337105-21337201)
chr2 (131-191)||(21316987-21317047)
[»] scaffold0011 (1 HSPs)
scaffold0011 (83-163)||(39387-39467)
[»] scaffold0453 (1 HSPs)
scaffold0453 (81-163)||(6090-6172)
[»] scaffold1256 (2 HSPs)
scaffold1256 (81-162)||(784-865)
scaffold1256 (131-192)||(554-615)
[»] scaffold0056 (1 HSPs)
scaffold0056 (66-159)||(15113-15206)
[»] scaffold0004 (3 HSPs)
scaffold0004 (66-159)||(64788-64881)
scaffold0004 (66-159)||(74238-74331)
scaffold0004 (70-159)||(67481-67571)
[»] chr5 (8 HSPs)
chr5 (81-192)||(6551977-6552091)
chr5 (66-142)||(21402198-21402274)
chr5 (66-142)||(16062335-16062410)
chr5 (66-158)||(26748747-26748838)
chr5 (66-137)||(26646240-26646311)
chr5 (66-114)||(14027251-14027299)
chr5 (66-114)||(8834559-8834607)
chr5 (66-114)||(12354768-12354816)
[»] chr1 (12 HSPs)
chr1 (66-148)||(6832901-6832983)
chr1 (66-149)||(21350679-21350762)
chr1 (81-163)||(17904459-17904541)
chr1 (66-148)||(18120244-18120326)
chr1 (66-148)||(28478044-28478126)
chr1 (66-142)||(12709692-12709768)
chr1 (66-114)||(44891142-44891190)
chr1 (66-142)||(12709357-12709433)
chr1 (66-114)||(24721227-24721275)
chr1 (66-149)||(39052068-39052151)
chr1 (66-104)||(12712998-12713036)
chr1 (131-192)||(44891263-44891324)
[»] chr7 (16 HSPs)
chr7 (81-192)||(9744512-9744633)
chr7 (66-148)||(4692020-4692102)
chr7 (83-148)||(9255732-9255797)
chr7 (83-148)||(9314453-9314518)
chr7 (81-163)||(48217919-48218001)
chr7 (66-151)||(11314465-11314550)
chr7 (66-142)||(11314406-11314482)
chr7 (66-148)||(43747143-43747225)
chr7 (66-114)||(13134363-13134411)
chr7 (66-114)||(15577365-15577413)
chr7 (82-123)||(9255799-9255840)
chr7 (82-123)||(9314410-9314451)
chr7 (88-148)||(14154347-14154407)
chr7 (80-159)||(36301903-36301982)
chr7 (80-159)||(37538061-37538139)
chr7 (131-192)||(9744421-9744482)
[»] scaffold0063 (2 HSPs)
scaffold0063 (81-192)||(61333-61453)
scaffold0063 (131-192)||(61483-61544)
[»] scaffold0628 (1 HSPs)
scaffold0628 (81-191)||(4913-5032)
[»] scaffold0108 (1 HSPs)
scaffold0108 (66-192)||(8285-8420)
[»] scaffold0230 (1 HSPs)
scaffold0230 (66-159)||(8121-8214)
[»] scaffold0174 (3 HSPs)
scaffold0174 (66-159)||(3659-3752)
scaffold0174 (66-159)||(9781-9874)
scaffold0174 (66-147)||(14757-14838)
[»] scaffold0379 (2 HSPs)
scaffold0379 (66-159)||(9256-9350)
scaffold0379 (66-159)||(16448-16542)
[»] scaffold0123 (1 HSPs)
scaffold0123 (66-148)||(15568-15650)
[»] scaffold0125 (1 HSPs)
scaffold0125 (66-142)||(24307-24382)
[»] scaffold0394 (1 HSPs)
scaffold0394 (66-159)||(8508-8601)
[»] scaffold0121 (1 HSPs)
scaffold0121 (66-114)||(18891-18939)
[»] scaffold0505 (1 HSPs)
scaffold0505 (68-114)||(3471-3517)
[»] scaffold0005 (1 HSPs)
scaffold0005 (66-108)||(188367-188409)
[»] scaffold0213 (1 HSPs)
scaffold0213 (66-114)||(17770-17818)
[»] scaffold1716 (1 HSPs)
scaffold1716 (66-113)||(1378-1425)
[»] scaffold0205 (1 HSPs)
scaffold0205 (66-113)||(6854-6901)
[»] scaffold0113 (1 HSPs)
scaffold0113 (66-109)||(33459-33502)
[»] scaffold0645 (1 HSPs)
scaffold0645 (66-114)||(933-981)
[»] scaffold0017 (1 HSPs)
scaffold0017 (66-114)||(25188-25236)


Alignment Details
Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 46739766 - 46739877
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataaacaaaaacgataaataatatt 180  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||| || ||||||||||| ||||||||||||||||    
T  46739766 actaataaacaataatttaagtaagagaatttatcaacacaaaacaacaacaaatcatcatcaacaatgcttcacataaacaacaacgataaataatatt 46739865  T
Q  181 gatccttcacat 192  Q
    ||||||||||||    
T  46739866 gatccttcacat 46739877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 26444479 - 26444590
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataaacaaaaacgataaataatatt 180  Q
    ||||||||||||| ||||||| |||| ||||||| ||| || ||||||| |||||||||||| ||||| || ||||||||||| ||| ||||||||||||    
T  26444479 actaataaacaatgatttaagcaagataatttatcaacacagaacaacaacaaatcatcatcaacaatgcttcacataaacaacaacaataaataatatt 26444578  T
Q  181 gatccttcacat 192  Q
    ||||||||||||    
T  26444579 gatccttcacat 26444590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 55582005 - 55582098
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||| |||  |||||||||||||||||||||| |||||| | |||||||    
T  55582005 ttcatcattagcaatactaataaacaataatttagataagagaatttatcaacataaaacaacagcaaatcatcatcaacaatagttcacataa 55582098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 9621285 - 9621378
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    |||||||||| || |||||||||||||||||||| ||  |||||||||  ||| ||||||||||| || |||||||| |||||||| |||||||    
T  9621285 ttcatcattaacaatactaataaacaataatttatgtgggagaatttaacaacacaaaacaacagtaattcatcatcaacaatacttcacataa 9621378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 35659256 - 35659361
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataaacaaaaacgataaataatatt 180  Q
    |||||||||||||||||||||||||||||||||| |||  | | ||||| |||||||||||| | ||| || |      |||| ||||||||||||||||    
T  35659256 actaataaacaataatttaagtaagagaatttatcaacatagagcaacaacaaatcatcatcaagaatgcttc------acaacaacgataaataatatt 35659349  T
Q  181 gatccttcacat 192  Q
    ||||||||||||    
T  35659350 gatccttcacat 35659361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 45315614 - 45315532
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    ||||||||||| |  |||||| ||||||||||||||||||| ||||||| ||| ||| |||||| || ||||||||| |||||    
T  45315614 ttcatcattagtaaaactaattaacaataatttaagtaagaaaatttatcaacacaatacaacaacatatcatcatcaacaat 45315532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 12621982 - 12622030
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  12621982 ttcatcattagtaaaactaataaacaataatttaagtaagagaatttat 12622030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 16027526 - 16027478
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  16027526 ttcatcattagtaaaactaataaacaataatttaagtaagagaatttat 16027478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 25512338 - 25512413
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcat 141  Q
    ||||||||||| |  ||||||||||||||||||||||||||  |||||| ||| |||  ||||| |||||||||||    
T  25512338 ttcatcattagtaaaactaataaacaataatttaagtaagaatatttatcaacacaatgcaacaacaaatcatcat 25512413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 14628974 - 14629016
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagaga 108  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  14628974 ttcatcattagcaatactaataaacagtaatttaagtaagaga 14629016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 26444620 - 26444681
Alignment:
Q  131 caaatcatcatcgacaatactgcacataaacaaaaacgataaataatattgatccttcacat 192  Q
    |||||||||||  ||||| || ||||||||||| ||| ||||||||||||||| ||||||||    
T  26444620 caaatcatcattaacaatgcttcacataaacaacaacaataaataatattgatacttcacat 26444681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 114
Target Start/End: Complemental strand, 46225830 - 46225797
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||||||||||||||||||||||||||    
T  46225830 actaataaacaataatttaagtaagagaatttat 46225797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 17958049 - 17958125
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatc 142  Q
    ||||||||||||| |||||||||||||||| | | || |||||| | |  ||| ||||||||| |||||||||||||    
T  17958049 ttcatcattagcaatactaataaacaataactcatgtgagagaaatcaccaacacaaaacaacggcaaatcatcatc 17958125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 44024991 - 44024943
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||| ||||    
T  44024991 ttcatcattagcaatactgataaacattaatttaagtaagagaacttat 44024943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 10282843 - 10282922
Alignment:
Q  80 tactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    |||||||||| ||| | | |||||||||||||||  ||| ||||||||||| || ||||||||  ||||||| |||||||    
T  10282843 tactaataaataatgagtaaagtaagagaatttaacaacacaaaacaacagtaattcatcatcagcaatacttcacataa 10282922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 13163858 - 13163937
Alignment:
Q  80 tactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    |||||||||||||| | | |||||||||||||||  ||| ||||||| || ||| |||||||| ||||| || |||||||    
T  13163858 tactaataaacaatgagtcaagtaagagaatttaacaacacaaaacagcatcaattcatcatcaacaatgcttcacataa 13163937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 192
Target Start/End: Original strand, 35659423 - 35659461
Alignment:
Q  154 acataaacaaaaacgataaataatattgatccttcacat 192  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  35659423 acataaacaacaacaataaataatattgatccttcacat 35659461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 22343749 - 22343840
Alignment:
Q  68 catcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||| || |||||||    
T  22343749 catcattagcaatactaataaacaataatttaagtaagagaatttatcaacacaaaacaacaacaaatcatcatcaacaatgcttcacataa 22343840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 22355409 - 22355500
Alignment:
Q  68 catcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||| || |||||||    
T  22355409 catcattagcaatactaataaacaataatttaagtaagagaatttatcaacacaaaacaacaacaaatcatcatcaacaatgcttcacataa 22355500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 18820617 - 18820481
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatact-gca-------cat 157  Q
    ||||||||||| |  ||||||||| |||||||||||||||||||||||||||| || ||||||| ||||||||||||  |||| ||  ||       |||    
T  18820617 ttcatcattagtaaaactaataaataataatttaagtaagagaatttattaacacagaacaacaacaaatcatcatcaccaatgctcacataaacagcat 18820518  T
Q  158 aaacaaaaacgataaataatattgatccttcacattg 194  Q
    |||||| ||||||||||||||||||||||||||||||    
T  18820517 aaacaacaacgataaataatattgatccttcacattg 18820481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 20518483 - 20518390
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||| ||| |||||| | ||||| || |||||||    
T  20518483 ttcatcattagcaatacttataaacaataatttaagtaagagaatttatcaacacaaaacaacaacaattcatcaccaacaatgcttcacataa 20518390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 5079691 - 5079780
Alignment:
Q  70 tcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||| |||  ||||||| |||||||||||||| |||||| | |||||||    
T  5079691 tcattagcaatactaataaacaataatttagataagagaatttatcaacataaaacaaaagcaaatcatcatcaacaatagttcacataa 5079780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 38988029 - 38988111
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||||| ||| |||  |||||||||||||||||| |||||    
T  38988029 ttcatcattagtaaaactaataaacaataatttaagttagagaatttatcaacacaatgcaacagcaaatcatcatcaacaat 38988111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 39019126 - 39019208
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||||| ||| |||  |||||||||||||||||| |||||    
T  39019126 ttcatcattagtaaaactaataaacaataatttaagttagagaatttatcaacacaatgcaacagcaaatcatcatcaacaat 39019208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 6574498 - 6574450
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  6574498 ttcatcattagtaaaactaataaacaataatttaagtaagagaatttat 6574450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 12800190 - 12800238
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  12800190 ttcatcattagcaatactaataaacagtaatttaagtaagagaacttat 12800238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 36406770 - 36406722
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  36406770 ttcatcattagtaaaactaataaacaataatttaagtaagagaatttat 36406722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 21513007 - 21513070
Alignment:
Q  85 ataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    |||||||||||||||||| ||||||||||| ||| |||  ||||| |||||||||||| |||||    
T  21513007 ataaacaataatttaagttagagaatttatcaacacaatgcaacaacaaatcatcatcaacaat 21513070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 17979867 - 17979785
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    ||||||||||| |   ||||||| |||||||||||||||| |||||||| ||| |||  ||||| |||||||||||| |||||    
T  17979867 ttcatcattagtaaagctaataagcaataatttaagtaagggaatttatcaacacaatgcaacaacaaatcatcatcaacaat 17979785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 22482567 - 22482608
Alignment:
Q  82 ctaataaacaataatttaagtaagagaatttattaacgcaaa 123  Q
    ||||||||||||||||||||||||||||||||| ||| ||||    
T  22482567 ctaataaacaataatttaagtaagagaatttatcaacacaaa 22482608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 36729274 - 36729229
Alignment:
Q  69 atcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    |||||||||| |||||||||||| ||||||||||||||||| ||||    
T  36729274 atcattagcaatactaataaacagtaatttaagtaagagaacttat 36729229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 36734026 - 36733978
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||| |  || |||||||||||||||||||||||||||||||    
T  36734026 ttcatcattagtaaaaccaataaacaataatttaagtaagagaatttat 36733978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 23885339 - 23885417
Alignment:
Q  80 tactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    |||||||||||||| | | ||||| |||||||||  ||| ||||||||||| || |||||||| |||||||| |||||||    
T  23885339 tactaataaacaatgagtcaagta-gagaatttaacaacacaaaacaacagtaattcatcatcaacaatacttcacataa 23885417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 192
Target Start/End: Complemental strand, 20025526 - 20025488
Alignment:
Q  154 acataaacaaaaacgataaataatattgatccttcacat 192  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  20025526 acataaacaaaaacaataaataatattgatacttcacat 20025488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 111
Target Start/End: Original strand, 22473041 - 22473071
Alignment:
Q  81 actaataaacaataatttaagtaagagaatt 111  Q
    |||||||||||||||||||||||||||||||    
T  22473041 actaataaacaataatttaagtaagagaatt 22473071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 114
Target Start/End: Complemental strand, 2718207 - 2718174
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttat 114  Q
    |||||||||||| |||||||||||||||||||||    
T  2718207 actaataaacaacaatttaagtaagagaatttat 2718174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 36406332 - 36406271
Alignment:
Q  131 caaatcatcatcgacaatactgcacataaacaaaaacgataaataatattgatccttcacat 192  Q
    |||||||||||  ||||| || ||||||||||| ||| ||||||| ||||||| ||||||||    
T  36406332 caaatcatcattaacaatgcttcacataaacaacaacaataaatactattgatacttcacat 36406271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 15026421 - 15026328
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||  |||||||||||| ||||| || |||||||    
T  15026421 ttcatcattagcaatactaataaacaataatttaagtaagagaatttatcaacacaaaacaacgacaaatcatcatcaacaatgcttcacataa 15026328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 12539993 - 12540086
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||| ||| |||  ||||||||| |||||||||||| |||||| | |||||||    
T  12539993 ttcatcattagcaatactaataaacaataatttagataagagaatatatcaacataaaacaacaacaaatcatcatcaacaatagttcacataa 12540086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 50352442 - 50352349
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||| | ||||||||||||||||||||  |||||||||||||  ||  |||||||||||| ||||||||| |||||| | |||||||    
T  50352442 ttcatcattagaaatactaataaacaataatttagataagagaatttatccacataaaacaacagcagatcatcatcaacaatagttcacataa 50352349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 149
Target Start/End: Complemental strand, 50756768 - 50756685
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaata 149  Q
    |||||||| | || ||||||||||||||||||||  ||||||||||||| |||  ||||||||| |||||||||||| ||||||    
T  50756768 ttcatcatcaacaatactaataaacaataatttagataagagaatttatcaacataaaacaacaacaaatcatcatcaacaata 50756685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 54331856 - 54331774
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttattaacgcaaaacaacagc-aaatcatcatcgacaatactgcacataaacaa 163  Q
    ||||||||||||||||| |||||||||||||||| |||||| ||||||| | ||||||||||| |||| ||| |||||||||||    
T  54331856 actaataaacaataatt-aagtaagagaatttatcaacgcagaacaacaacaaaatcatcatcaacaacacttcacataaacaa 54331774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 17206626 - 17206708
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataaacaa 163  Q
    |||||||||||||||||||||| ||||||||||| ||| || |||| || ||||||| |||| ||||| || |||||||||||    
T  17206626 actaataaacaataatttaagtgagagaatttatcaacacagaacagcaacaaatcaacatcaacaatgcttcacataaacaa 17206708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 21846825 - 21846736
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    |||||||||| ||  ||||||||||||||||    |||| ||||||||| ||| ||||||||||||||||||||||| ||||| || |||||||    
T  21846825 ttcatcattaacaacactaataaacaataat----gtaaaagaatttatcaacacaaaacaacagcaaatcatcatcaacaatgcttcacataa 21846736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 3528713 - 3528620
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    |||||||||| || |||||||||| ||| | | |||||||||||||||  ||| ||||||||||| || |||||| | |||||||| |||||||    
T  3528713 ttcatcattaacaatactaataaataatgagtcaagtaagagaatttaacaacacaaaacaacagtaattcatcaacaacaatacttcacataa 3528620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 25200790 - 25200883
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    |||||||||| || |||||||||||||||||||| || ||||||||||  ||| | ||||||| |||| |||| ||| ||||| || |||||||    
T  25200790 ttcatcattaacaatactaataaacaataatttatgtgagagaatttaacaactcgaaacaacggcaattcattatcaacaatgcttcacataa 25200883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 12918579 - 12918503
Alignment:
Q  83 taataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||| | | |||||||||||||||  ||| ||||||||||| || |||||||| |||||||| |||||||    
T  12918579 taataaacaatgagtcaagtaagagaatttagcaacacaaaacaacagtaattcatcatcaacaatacttcacataa 12918503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 16180800 - 16180752
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  16180800 ttcatcattagcaatactaataaacagtaatttaagtaagagaacttat 16180752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 11191140 - 11191188
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||| | |||||||||||| ||||||||||||||||| ||||    
T  11191140 ttcatcattagtaatactaataaacagtaatttaagtaagagaacttat 11191188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 12860632 - 12860584
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||| |  | ||||||||||||||||||||||||||||||||    
T  12860632 ttcatcattagtaaaattaataaacaataatttaagtaagagaatttat 12860584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 48630159 - 48630206
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaattta 113  Q
    |||||||||| || |||||||||||||||||||| || ||||||||||    
T  48630159 ttcatcattaacaatactaataaacaataatttatgtgagagaattta 48630206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 114
Target Start/End: Original strand, 17668904 - 17668937
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttat 114  Q
    |||||||||||||| |||||||||||||||||||    
T  17668904 actaataaacaatagtttaagtaagagaatttat 17668937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 11561714 - 11561762
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||||| ||| |||||| | ||||||||||||||||| ||||    
T  11561714 ttcatcattagcaatacaaataaatagtaatttaagtaagagaacttat 11561762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 19320 - 19196
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataaacaaaa 165  Q
    ||||||||||||| ||||||||||||||||||||  |||||| |||||| |||  |||||||||| |||| |||||| ||||| || ||||||||||| |    
T  19320 ttcatcattagcaatactaataaacaataatttagataagaggatttatcaacataaaacaacagtaaattatcatcaacaatgcttcacataaacaaca 19221  T
Q  166 acgataaataatattgatccttcac 190  Q
    ||||||||| ||||| || ||||||    
T  19220 acgataaattatatttattcttcac 19196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 19164 - 19112
Alignment:
Q  131 caaatcatcatcgacaatactgcacataaacaaaaacgataaataatattgat 183  Q
    |||||||||||  ||||| || ||||||||||| ||| |||||||||||||||    
T  19164 caaatcatcattaacaatgcttcacataaacaacaacaataaataatattgat 19112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 29043981 - 29044074
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||| |||  |||||||||||||||||||||| |||||| | |||||||    
T  29043981 ttcatcattagcaatactaataaacaataatttagataagagaatttatcaacataaaacaacagcaaatcatcatcaacaatagttcacataa 29044074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 66 - 192
Target Start/End: Original strand, 22555746 - 22555881
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgc---------aca 156  Q
    ||||||||||||| | ||||||||||||||||||  |||||| |||||| |||  |||||||||||||||||||||| ||||| || |         |||    
T  22555746 ttcatcattagcaattctaataaacaataatttagataagaggatttatcaacataaaacaacagcaaatcatcatcaacaatgcttcatataaacaaca 22555845  T
Q  157 taaacaaaaacgataaataatattgatccttcacat 192  Q
    ||||||| ||||||||||||||||||||||||||||    
T  22555846 taaacaacaacgataaataatattgatccttcacat 22555881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 35056064 - 35056157
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    |||||||| | || |||||||||||||| | | |||||||||||||||  ||| |||| |||||  || |||||||| |||||||| |||||||    
T  35056064 ttcatcatcaacaatactaataaacaatgagtcaagtaagagaatttaacaacacaaagcaacaataattcatcatcaacaatacttcacataa 35056157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 31347124 - 31347056
Alignment:
Q  80 tactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    |||||||||||||| | |||||||||||||||||  |||  ||||||||| ||| |||||||| |||||    
T  31347124 tactaataaacaatgagttaagtaagagaatttaacaacataaaacaacatcaattcatcatcaacaat 31347056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 10444888 - 10444967
Alignment:
Q  80 tactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    |||| ||||||||| | | |||||||||||||||  ||| |||||||| || || |||||||| |||||||| |||||||    
T  10444888 tactgataaacaatgagtcaagtaagagaatttaacaacacaaaacaatagtaattcatcatcaacaatacttcacataa 10444967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 192
Target Start/End: Complemental strand, 23498517 - 23498479
Alignment:
Q  154 acataaacaaaaacgataaataatattgatccttcacat 192  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  23498517 acataaacaacaacgataaataatattgatacttcacat 23498479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 22555911 - 22555972
Alignment:
Q  131 caaatcatcatcgacaatactgcacataaacaaaaacgataaataatattgatccttcacat 192  Q
    |||||||||||  ||||| || ||||||||||| ||| |||||||||||||||  |||||||    
T  22555911 caaatcatcattaacaatgcttcacataaacaacaacaataaataatattgatagttcacat 22555972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 36733218 - 36733125
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||| |||  |||||||||||||||||||||| |||||| | |||||||    
T  36733218 ttcatcattagcaatactaataaacaataatttagataagagaatttatcaacataaaacaacagcaaatcatcatcaacaatagttcacataa 36733125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 45679150 - 45679243
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||| |||  ||||||||| |||||||||||| |||||| | |||||||    
T  45679150 ttcatcattagcaatactaataaacaataatttagataagagaatttatcaacataaaacaacaacaaatcatcatcaacaataattcacataa 45679243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 149
Target Start/End: Original strand, 22685441 - 22685524
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaata 149  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||| |||  |||||||||| ||||||||||| ||||||    
T  22685441 ttcatcattagcaatactaataaacaataatttagataagagaatttatcaacataaaacaacagaaaatcatcatcaacaata 22685524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 36737371 - 36737278
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||||| |||  |||||||||||||||  ||||||||||||| |||  |||||||||||||||||||||| |||||| | |||||||    
T  36737371 ttcatcattagcaatacctataaacaataatttagataagagaatttatcaacataaaacaacagcaaatcatcatcaacaatagttcacataa 36737278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 25588073 - 25587981
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||||| || |||||| ||||||||||  ||||||||||||| |||  |||||||||||||||||||||| |||||| | |||||||    
T  25588073 ttcatcattagcaataataataa-caataatttagataagagaatttatcaacataaaacaacagcaaatcatcatcaacaatagttcacataa 25587981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 14180905 - 14180829
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatc 142  Q
    |||||||||| || ||||||||||||||| |||||||||||||||| |  ||||||||||||| |||||||| ||||    
T  14180905 ttcatcattaacaatactaataaacaatattttaagtaagagaattcaccaacgcaaaacaacggcaaatcaacatc 14180829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 21337037 - 21336977
Alignment:
Q  131 caaatcatcatcgacaatactgcacataaacaaaaacgataaataatattgatccttcaca 191  Q
    |||||||||||| ||||| || ||||||||||| ||| ||||||||||||||| |||||||    
T  21337037 caaatcatcatcaacaatgcttcacataaacaacaacaataaataatattgatacttcaca 21336977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 25138584 - 25138632
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  25138584 ttcatcattagcaatactaataaacagtaatttaagtaagagaacttat 25138632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 44761823 - 44761886
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaaca 129  Q
    ||||||||||| | ||||||||||||||||||||  ||||||||||||| |||  |||||||||    
T  44761823 ttcatcattagtaatactaataaacaataatttagataagagaatttatcaacataaaacaaca 44761886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 21317211 - 21317115
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataaacaa 163  Q
    ||||||||||| |  ||||||||| |||| || ||| |||||||||||| ||| || |||||||||||||||||||| || || || | |||||||||    
T  21317211 ttcatcattagtaaaactaataaataatactt-aagcaagagaatttatcaacacagaacaacagcaaatcatcatcaacgatgcttctcataaacaa 21317115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 1385301 - 1385234
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    ||||||| |||||| ||| ||||||||||||||| |||  ||| ||||| |||||||||||| |||||    
T  1385301 actaatacacaatagtttgagtaagagaatttatcaacataaagcaacaacaaatcatcatcaacaat 1385234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 192
Target Start/End: Complemental strand, 1385219 - 1385181
Alignment:
Q  154 acataaacaaaaacgataaataatattgatccttcacat 192  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  1385219 acataaacaacaacgataaataatattgatacttcacat 1385181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 21337201 - 21337105
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataaacaa 163  Q
    ||||||||||| |  ||||||||| |||| || ||| |||||||||||| ||| || ||||||| |||||||||||| || || || | |||||||||    
T  21337201 ttcatcattagtaaaactaataaataatactt-aagcaagagaatttatcaacacagaacaacatcaaatcatcatcaacgatgcttctcataaacaa 21337105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 21317047 - 21316987
Alignment:
Q  131 caaatcatcatcgacaatactgcacataaacaaaaacgataaataatattgatccttcaca 191  Q
    |||||||||||| ||||| || ||||||||||| ||  |||||||||| |||| |||||||    
T  21317047 caaatcatcatcaacaatgcttcacataaacaacaataataaataataatgatacttcaca 21316987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 39387 - 39467
Alignment:
Q  83 taataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataaacaa 163  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||| || |||||||||||    
T  39387 taataaacaataatttaagtaagagaatttatcaacacaaaacaacaacaaatcatcatcaacaatgcttcacataaacaa 39467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 6172 - 6090
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataaacaa 163  Q
    |||||||||||||||||||||||||||||||||| ||| || ||||||| |||||||||||| ||||| || |||||||||||    
T  6172 actaataaacaataatttaagtaagagaatttatcaacacagaacaacaacaaatcatcatcaacaatgcttcacataaacaa 6090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 865 - 784
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataaaca 162  Q
    |||||||||||||||||||||||||||||||||| |||  ||| |||||||||||||||||| ||||| || ||||||||||    
T  865 actaataaacaataatttaagtaagagaatttatcaacataaagcaacagcaaatcatcatcaacaatgcttcacataaaca 784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 615 - 554
Alignment:
Q  131 caaatcatcatcgacaatactgcacataaacaaaaacgataaataatattgatccttcacat 192  Q
    |||||||||||  ||||| || ||||||||||| ||  ||||||||||||||| ||||||||    
T  615 caaatcatcattaacaatgcttcacataaacaacaataataaataatattgatacttcacat 554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 15113 - 15206
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||| |  |||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||||||| |||||| | |||||||    
T  15113 ttcatcattagtaaaactaatgaacaataatttaagtaagagaatttatcaacataaaacaacagcaaatcatcatcaacaatagttcacataa 15206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 64788 - 64881
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||| |||  | |||||||||||||||||||| |||||| | |||||||    
T  64788 ttcatcattagcaatactaataaacaataatttagataagagaatttatcaacatacaacaacagcaaatcatcatcaacaatagttcacataa 64881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 74238 - 74331
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||||| ||||||||||||||||||||  ||||||| ||| | |||  |||||||||||||||||||||| |||||| | |||||||    
T  74238 ttcatcattagcaatactaataaacaataatttagataagagattttgtcaacataaaacaacagcaaatcatcatcaacaatagttcacataa 74331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 159
Target Start/End: Complemental strand, 67571 - 67481
Alignment:
Q  70 tcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatca-tcatcgacaatactgcacataa 159  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||| |||  ||||| ||||||| ||| ||||| |||||| | |||||||    
T  67571 tcattagcaatactaataaacaataatttagataagagaatttatcaacataaaactacagcaactcattcatcaacaatagttcacataa 67481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 6552091 - 6551977
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacata---aacaaaaacgataaataat 177  Q
    |||||||||||||||||||||| ||||||||||| ||| || ||||||| |||||||||||| ||||| || | ||||   ||||| ||| |||||||||    
T  6552091 actaataaacaataatttaagtgagagaatttatcaacacagaacaacaacaaatcatcatcaacaatgcttctcataaacaacaacaacaataaataat 6551992  T
Q  178 attgatccttcacat 192  Q
    |||||| ||||||||    
T  6551991 attgatacttcacat 6551977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 21402274 - 21402198
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatc 142  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||| |  ||| |||||||||||||||||||||||    
T  21402274 ttcatcattagcaatactaataaacaataattcaagtaagagaattcaccaacacaaaacaacagcaaatcatcatc 21402198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 16062335 - 16062410
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatc 142  Q
    ||||||||||||| ||||||||||||||||||||  |||||| |||||| |||  ||||||||| ||||||||||||    
T  16062335 ttcatcattagcaatactaataaacaataatttagataagag-atttatcaacataaaacaacaacaaatcatcatc 16062410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 158
Target Start/End: Original strand, 26748747 - 26748838
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacata 158  Q
    ||||||||||||| ||||||||||||||||||||  |||| ||||||| | ||  ||||| |||||||||||||||| |||||| | ||||||    
T  26748747 ttcatcattagcaatactaataaacaataatttagataagtgaattta-tcacataaaaccacagcaaatcatcatcaacaatagttcacata 26748838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 26646240 - 26646311
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatca 137  Q
    ||||||||||| |  ||||||||||||||| ||||| |||||||||||| ||| || |||||||||||||||    
T  26646240 ttcatcattagtaaaactaataaacaataacttaagcaagagaatttatcaacacagaacaacagcaaatca 26646311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 14027299 - 14027251
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  14027299 ttcatcattagtaaaactaataaacaataatttaagtaagagaatttat 14027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 8834607 - 8834559
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||| |  |||||| |||||||||||||||||||||||||||    
T  8834607 ttcatcattagtaaaactaattaacaataatttaagtaagagaatttat 8834559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 12354768 - 12354816
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||| |  |||||||||||||||||||||||||| |||||||    
T  12354768 ttcatcattagtaaaactaataaacaataatttaagtaagaaaatttat 12354816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 6832901 - 6832983
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    ||||||||||||| ||||||||||||||||||||  |||||| |||||| |||  |||||||||||||||||||||| |||||    
T  6832901 ttcatcattagcaatactaataaacaataatttagataagaggatttatcaacataaaacaacagcaaatcatcatcaacaat 6832983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 149
Target Start/End: Complemental strand, 21350762 - 21350679
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaata 149  Q
    ||||||||||||| || |||||||||||||||||  |||||| |||||| |||  |||||||||||||||||||||| ||||||    
T  21350762 ttcatcattagcaatattaataaacaataatttagataagaggatttatcaacataaaacaacagcaaatcatcatcaacaata 21350679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 17904541 - 17904459
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataaacaa 163  Q
    |||||||||||||||||||||| ||||||||||| ||| || |||| || |||||||||||| ||||| || |||||||||||    
T  17904541 actaataaacaataatttaagttagagaatttatcaacacagaacatcaacaaatcatcatcaacaatgcttcacataaacaa 17904459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 18120244 - 18120326
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||||| ||| |||  ||||| |||||||||||| |||||    
T  18120244 ttcatcattagtaaaactaataaacaataatttaagttagagaatttatcaacacaatgcaacaacaaatcatcatcaacaat 18120326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 28478126 - 28478044
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||||| ||| |||  ||||| |||||||||||| |||||    
T  28478126 ttcatcattagtaaaactaataaacaataatttaagttagagaatttatcaacacaatgcaacaacaaatcatcatcaacaat 28478044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 12709692 - 12709768
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatc 142  Q
    |||||||||| || ||||||||||||| ||||||||||| |||||| |  ||| ||||||||| |||||||||||||    
T  12709692 ttcatcattaacaatactaataaacaagaatttaagtaacagaattcaccaacacaaaacaactgcaaatcatcatc 12709768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 44891142 - 44891190
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  44891142 ttcatcattagcaatactaataaacagtaatttaagtaagagaatttat 44891190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 12709357 - 12709433
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatc 142  Q
    |||||||||| || ||||||||||||||||||||||||| | |||| |  | | ||||||||| |||||||||||||    
T  12709357 ttcatcattaacaatactaataaacaataatttaagtaacataattcaccagcacaaaacaacggcaaatcatcatc 12709433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 24721275 - 24721227
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  24721275 ttcatcattagtaaaactaataaacaataatttaagtaagagaatttat 24721227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 149
Target Start/End: Original strand, 39052068 - 39052151
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaata 149  Q
    |||||||| | || ||||||||||||||||||||  ||||||||||||| |||  | |||| ||| ||||||||||| ||||||    
T  39052068 ttcatcatcaacaatactaataaacaataatttagataagagaatttatcaacatataacagcagaaaatcatcatcaacaata 39052151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 12712998 - 12713036
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaa 104  Q
    |||||||||| || |||||||||||||||||||||||||    
T  12712998 ttcatcattaacaatactaataaacaataatttaagtaa 12713036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 44891263 - 44891324
Alignment:
Q  131 caaatcatcatcgacaatactgcacataaacaaaaacgataaataatattgatccttcacat 192  Q
    |||||||||||  |||||  | ||||||||||| ||| ||||||||||||||| ||||||||    
T  44891263 caaatcatcattaacaatggtccacataaacaacaacaataaataatattgatacttcacat 44891324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 9744633 - 9744512
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttattaacgcaaaacaacagc-aaatcatcatcgacaatactgc---------acataaacaaaaacgat 170  Q
    |||||||||||||||||||||||||||||||||| ||| || ||||||| | ||||||||||| ||||| || |         |||||||||| ||||||    
T  9744633 actaataaacaataatttaagtaagagaatttatcaacacagaacaacaacaaaatcatcatcaacaatgcttcacataaacaacataaacaacaacgat 9744534  T
Q  171 aaataatattgatccttcacat 192  Q
    ||||||||||||||||||||||    
T  9744533 aaataatattgatccttcacat 9744512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 4692102 - 4692020
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||||| ||| |||  |||||||||||||||||| |||||    
T  4692102 ttcatcattagtaaaactaataaacaataatttaagttagagaatttatcaacacaatgcaacagcaaatcatcatcaacaat 4692020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 9255732 - 9255797
Alignment:
Q  83 taataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    |||||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||| |||||    
T  9255732 taataaacaataatttaagtaagaaaatttatcaacacaaaacaacaacaaatcatcatcaacaat 9255797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 9314518 - 9314453
Alignment:
Q  83 taataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    |||||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||| |||||    
T  9314518 taataaacaataatttaagtaagaaaatttatcaacacaaaacaacaacaaatcatcatcaacaat 9314453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 48218001 - 48217919
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataaacaa 163  Q
    ||||||||||||||||||||| |||||||||||| |||  | ||||||| |||||||||| | ||||| || |||||||||||    
T  48218001 actaataaacaataatttaaggaagagaatttatcaacatagaacaacaacaaatcatcaacaacaatgcttcacataaacaa 48217919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 66 - 151
Target Start/End: Complemental strand, 11314550 - 11314465
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatact 151  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||| |||  |||| |||| ||| |||||||  ||||||||    
T  11314550 ttcatcattagcaatactaataaacaataatttagataagagaatttatcaacataaaataacatcaattcatcattaacaatact 11314465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 11314482 - 11314406
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatc 142  Q
    |||||||||| || |||||||||| |||| |||||||||||||||| |  ||| ||||||||| |||||||||||||    
T  11314482 ttcatcattaacaatactaataaataatagtttaagtaagagaattcagcaacacaaaacaacggcaaatcatcatc 11314406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 43747143 - 43747225
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    ||||||||||| |  |||||||||||||||||||||| ||| ||||||| ||| |||  ||||| |||||||||||| |||||    
T  43747143 ttcatcattagtaaaactaataaacaataatttaagttagaaaatttatcaacacaatgcaacaacaaatcatcatcaacaat 43747225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 13134411 - 13134363
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  13134411 ttcatcattagcattactaataaacagtaatttaagtaagagaacttat 13134363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 15577413 - 15577365
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  15577413 ttcatcattagtaaaactaataaacaataatttaagtaagagaatttat 15577365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 9255799 - 9255840
Alignment:
Q  82 ctaataaacaataatttaagtaagagaatttattaacgcaaa 123  Q
    ||||||||||||||||||||||||||||||||| ||| ||||    
T  9255799 ctaataaacaataatttaagtaagagaatttatcaacacaaa 9255840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 9314451 - 9314410
Alignment:
Q  82 ctaataaacaataatttaagtaagagaatttattaacgcaaa 123  Q
    ||||||||||||||||||||||||||||||||| ||| ||||    
T  9314451 ctaataaacaataatttaagtaagagaatttatcaacacaaa 9314410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 14154407 - 14154347
Alignment:
Q  88 aacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    ||||||||||||||||||||||||||| ||| |||  || ||| ||||||||||| |||||    
T  14154407 aacaataatttaagtaagagaatttatcaacacaatgcatcagaaaatcatcatcaacaat 14154347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 36301982 - 36301903
Alignment:
Q  80 tactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    |||||||||| ||| | | |||||||||||||||  |||  |||||||||| || |||||||| |||||||| |||||||    
T  36301982 tactaataaataatgagtcaagtaagagaatttaacaacataaaacaacagtaattcatcatcaacaatacttcacataa 36301903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 37538061 - 37538139
Alignment:
Q  80 tactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    |||||||||||||| | | ||||| |||||||||  |||||||||||| || || |||||||| |||||||| |||||||    
T  37538061 tactaataaacaatgagtcaagta-gagaatttaacaacgcaaaacaatagtaattcatcatcaacaatacttcacataa 37538139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 9744482 - 9744421
Alignment:
Q  131 caaatcatcatcgacaatactgcacataaacaaaaacgataaataatattgatccttcacat 192  Q
    |||||||||||   |||| || ||||||||||| ||| ||||||||||||||| ||||||||    
T  9744482 caaatcatcattagcaatgcttcacataaacaacaacaataaataatattgatacttcacat 9744421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 61333 - 61453
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa---------acaaaaacgata 171  Q
    |||||||||||||||||||| ||||||||||||| ||| |  ||||||| |||||||||||| ||||| || |||||||         |||| |||||||    
T  61333 actaataaacaataatttaaataagagaatttatcaacactgaacaacaacaaatcatcatcaacaatgcttcacataaacaacatatacaacaacgata 61432  T
Q  172 aataatattgatccttcacat 192  Q
    |||||||||||||||||||||    
T  61433 aataatattgatccttcacat 61453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 61483 - 61544
Alignment:
Q  131 caaatcatcatcgacaatactgcacataaacaaaaacgataaataatattgatccttcacat 192  Q
    |||||||||||  ||||| || ||||||||||| ||| ||||||||||||||| ||||||||    
T  61483 caaatcatcattaacaatgcttcacataaacaacaacaataaataatattgatacttcacat 61544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 191
Target Start/End: Complemental strand, 5032 - 4913
Alignment:
Q  81 actaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgc---------acataaacaaaaacgata 171  Q
    |||||||||||||||||||| ||||||||||||| ||| || ||||||| |||||||||||| ||||| || |         |||||||||| ||| |||    
T  5032 actaataaacaataatttaattaagagaatttatcaacacagaacaacaacaaatcatcatcaacaatgcttcaaataaacaacataaacaacaactata 4933  T
Q  172 aataatattgatccttcaca 191  Q
    ||||||||||||||||||||    
T  4932 aataatattgatccttcaca 4913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 8420 - 8285
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataaac---- 161  Q
    ||||| ||||||| |||||||||||| |||||||  |||||| |||||| |||  |||||||||||||||||||||| |||||  | |||||||||        
T  8420 ttcattattagcaatactaataaacattaatttagataagaggatttatcaacataaaacaacagcaaatcatcatcaacaatgtttcacataaacaaca 8321  T
Q  162 -----aaaaacgataaataatattgatccttcacat 192  Q
         || ||||||||||||||||||||||||||||    
T  8320 taaataacaacgataaataatattgatccttcacat 8285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 8214 - 8121
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||| | | ||||||||||||||||||  ||||||||||||| |||  ||||||||| |||||||||||| |||||| | |||||||    
T  8214 ttcatcattaggaatgctaataaacaataatttagataagagaatttatcaacataaaacaacaacaaatcatcatcaacaatagttcacataa 8121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 3659 - 3752
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||||| ||||||||||| ||||||||  ||||||||||||| ||   |||||||||||||||||||||  |||||| | |||||||    
T  3659 ttcatcattagcaatactaataaactataatttatataagagaatttatcaatataaaacaacagcaaatcatcattaacaatagttcacataa 3752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 9781 - 9874
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||||| ||||||||||| ||||||||  ||||||||||||| ||   |||||||||||||||||||||  |||||| | |||||||    
T  9781 ttcatcattagcaatactaataaactataatttatataagagaatttatcaatataaaacaacagcaaatcatcattaacaatagttcacataa 9874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 14757 - 14838
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaa 147  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||| |||  |||||||||  ||||||||||| ||||    
T  14757 ttcatcattagcaatactaataaacaataatttagataagagaatttatcaacataaaacaacaaaaaatcatcatcaacaa 14838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 9256 - 9350
Alignment:
Q  66 ttcatcattagcactactaataaacaa-taatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||||| ||||||||||||| |||||||  ||||||||||||| |||  ||||||| || ||||||||||| |||||| | |||||||    
T  9256 ttcatcattagcaatactaataaacaaataatttagataagagaatttatcaacataaaacaaaagaaaatcatcatcaacaatagttcacataa 9350  T

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Target: scaffold0379; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 16448 - 16542
Alignment:
Q  66 ttcatcattagcactactaataaacaa-taatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    ||||||||||||| ||||||||||||| |||||||  ||||||||||||| |||  ||||||| || ||||||||||| |||||| | |||||||    
T  16448 ttcatcattagcaatactaataaacaaataatttagataagagaatttatcaacataaaacaaaagaaaatcatcatcaacaatagttcacataa 16542  T

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Target: scaffold0123 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 15568 - 15650
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaat 148  Q
    ||||||||||| |  ||||||||||||||||||| |||||||||||||| ||| |||   ||||||||||||||||| |||||    
T  15568 ttcatcattagtaaaactaataaacaataatttatgtaagagaatttatcaacacaatgtaacagcaaatcatcatcaacaat 15650  T

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Target: scaffold0125 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 24307 - 24382
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatc 142  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||| |||   |||||||| ||||||||||||    
T  24307 ttcatcattagcaatactaataaacaataatttagataagagaatttatcaac-ataaacaacaacaaatcatcatc 24382  T

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Target: scaffold0394 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 8601 - 8508
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttattaacgcaaaacaacagcaaatcatcatcgacaatactgcacataa 159  Q
    |||||||||| || |||||||||||||||||||| || ||||||||||  ||| | |||||||  ||| |||||||| ||||| || |||||||    
T  8601 ttcatcattaacaatactaataaacaataatttatgtgagagaatttaacaactcgaaacaacgacaattcatcatcaacaatgcttcacataa 8508  T

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Target: scaffold0121 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 18891 - 18939
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  18891 ttcatcattagtaaaactaataaacaataatttaagtaagagaatttat 18939  T

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Target: scaffold0505 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 3471 - 3517
Alignment:
Q  68 catcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||| |  ||||||||||||||||||||||||||||||||||    
T  3471 catcattagtaaaactaataaacaataatttaagtaagagaatttat 3517  T

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Target: scaffold0005 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 188409 - 188367
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagaga 108  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  188409 ttcatcattagcaatactaataaacagtaatttaagtaagaga 188367  T

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Target: scaffold0213 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 17770 - 17818
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||| |  ||||||||||| ||||||||||||||||||||||    
T  17770 ttcatcattagtaaaactaataaacactaatttaagtaagagaatttat 17818  T

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Target: scaffold1716 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1716
Description:

Target: scaffold1716; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 1378 - 1425
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaattta 113  Q
    |||||||||| || |||||||||||||||||||| || ||||||||||    
T  1378 ttcatcattaacaatactaataaacaataatttatgtgagagaattta 1425  T

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Target: scaffold0205 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 6901 - 6854
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaattta 113  Q
    |||||||||| || |||||||||||||||||||| || ||||||||||    
T  6901 ttcatcattaacaatactaataaacaataatttatgtgagagaattta 6854  T

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Target: scaffold0113 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 33459 - 33502
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaa 109  Q
    ||||||||||||| |||||||||| | |||||||||||||||||    
T  33459 ttcatcattagcaatactaataaagagtaatttaagtaagagaa 33502  T

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Target: scaffold0645 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0645
Description:

Target: scaffold0645; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 981 - 933
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||||| ||| |||||| | ||||||||||||||||| ||||    
T  981 ttcatcattagcaatacaaataaatagtaatttaagtaagagaacttat 933  T

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Target: scaffold0017 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 25188 - 25236
Alignment:
Q  66 ttcatcattagcactactaataaacaataatttaagtaagagaatttat 114  Q
    ||||||||||| |  ||||||||||| ||| ||||||||||||||||||    
T  25188 ttcatcattagtaaaactaataaacagtaacttaagtaagagaatttat 25236  T

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