View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17330_high_1 (Length: 754)

Name: NF17330_high_1
Description: NF17330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17330_high_1
NF17330_high_1
[»] chr5 (49 HSPs)
chr5 (14-736)||(6586973-6587695)
chr5 (141-254)||(9202740-9202854)
chr5 (144-254)||(7674612-7674722)
chr5 (158-254)||(12425535-12425631)
chr5 (141-236)||(39105446-39105542)
chr5 (141-242)||(16457971-16458073)
chr5 (155-254)||(16937890-16937989)
chr5 (141-231)||(2568645-2568735)
chr5 (146-232)||(37526197-37526283)
chr5 (158-232)||(37588370-37588444)
chr5 (159-236)||(10272442-10272519)
chr5 (154-254)||(42582876-42582976)
chr5 (154-217)||(4014430-4014493)
chr5 (146-232)||(37690634-37690721)
chr5 (141-236)||(41957444-41957539)
chr5 (148-254)||(42583113-42583219)
chr5 (142-231)||(15308987-15309076)
chr5 (142-231)||(17258877-17258966)
chr5 (141-233)||(3977293-3977385)
chr5 (154-222)||(7984965-7985033)
chr5 (141-248)||(14674893-14675001)
chr5 (157-221)||(15074758-15074822)
chr5 (142-254)||(16863745-16863856)
chr5 (141-220)||(32703269-32703348)
chr5 (163-254)||(42569722-42569813)
chr5 (173-234)||(11700146-11700208)
chr5 (170-248)||(25461061-25461139)
chr5 (179-225)||(27298066-27298112)
chr5 (154-236)||(34160713-34160795)
chr5 (141-222)||(41534437-41534516)
chr5 (144-233)||(17368661-17368750)
chr5 (159-236)||(39594789-39594866)
chr5 (144-236)||(25461312-25461404)
chr5 (173-233)||(28776978-28777038)
chr5 (159-231)||(36318761-36318833)
chr5 (156-223)||(1465028-1465094)
chr5 (170-245)||(7319379-7319454)
chr5 (143-234)||(18543192-18543282)
chr5 (173-220)||(29925839-29925886)
chr5 (201-236)||(37914735-37914770)
chr5 (200-234)||(13244534-13244568)
chr5 (170-236)||(17560436-17560502)
chr5 (145-236)||(19138714-19138807)
chr5 (144-234)||(32172637-32172727)
chr5 (159-232)||(443921-443994)
chr5 (203-236)||(5559707-5559740)
chr5 (145-218)||(11707055-11707128)
chr5 (141-254)||(14295470-14295583)
chr5 (188-233)||(14364224-14364269)
[»] chr3 (65 HSPs)
chr3 (141-247)||(21367638-21367745)
chr3 (144-254)||(1816547-1816657)
chr3 (145-251)||(52618970-52619076)
chr3 (141-236)||(402534-402630)
chr3 (141-236)||(45541553-45541648)
chr3 (154-254)||(31403322-31403422)
chr3 (154-254)||(36783340-36783440)
chr3 (141-220)||(39980727-39980807)
chr3 (161-224)||(50600191-50600254)
chr3 (155-254)||(53789468-53789567)
chr3 (171-253)||(14145877-14145959)
chr3 (162-232)||(14548735-14548805)
chr3 (154-224)||(24085344-24085414)
chr3 (141-227)||(39602203-39602289)
chr3 (156-254)||(44061032-44061129)
chr3 (147-236)||(40665411-40665500)
chr3 (141-236)||(1217793-1217888)
chr3 (155-234)||(28622006-28622085)
chr3 (141-236)||(4401029-4401122)
chr3 (184-254)||(12862284-12862353)
chr3 (200-254)||(25447296-25447350)
chr3 (155-253)||(30443858-30443956)
chr3 (184-254)||(30956662-30956732)
chr3 (184-254)||(30972474-30972544)
chr3 (141-230)||(36139866-36139955)
chr3 (148-218)||(36887504-36887574)
chr3 (200-254)||(37788824-37788878)
chr3 (163-225)||(44295522-44295584)
chr3 (142-236)||(52440656-52440750)
chr3 (155-236)||(20880458-20880539)
chr3 (174-231)||(22203417-22203474)
chr3 (146-219)||(33883748-33883821)
chr3 (155-236)||(36631058-36631139)
chr3 (141-254)||(49465658-49465769)
chr3 (171-231)||(18405854-18405914)
chr3 (146-218)||(20669172-20669244)
chr3 (145-225)||(24235681-24235760)
chr3 (169-225)||(33046830-33046886)
chr3 (144-247)||(33405162-33405266)
chr3 (141-236)||(50952314-50952410)
chr3 (157-236)||(2719451-2719529)
chr3 (158-233)||(16990171-16990246)
chr3 (155-254)||(20170487-20170586)
chr3 (171-254)||(21335639-21335722)
chr3 (142-233)||(24785190-24785281)
chr3 (195-234)||(41057022-41057061)
chr3 (141-187)||(5391910-5391956)
chr3 (200-254)||(10101528-10101582)
chr3 (200-254)||(10212453-10212507)
chr3 (145-223)||(20467183-20467261)
chr3 (155-221)||(25776114-25776180)
chr3 (158-212)||(35696244-35696298)
chr3 (141-230)||(36101556-36101645)
chr3 (141-187)||(39723233-39723279)
chr3 (171-233)||(42733960-42734022)
chr3 (154-236)||(45264372-45264454)
chr3 (174-236)||(46886718-46886780)
chr3 (171-225)||(51510216-51510270)
chr3 (141-235)||(54837027-54837121)
chr3 (144-193)||(3044255-3044304)
chr3 (144-253)||(21574456-21574564)
chr3 (173-254)||(24684848-24684929)
chr3 (144-193)||(25925767-25925816)
chr3 (145-254)||(30573911-30574020)
chr3 (203-236)||(35450572-35450605)
[»] chr2 (59 HSPs)
chr2 (141-236)||(680485-680580)
chr2 (142-247)||(1625871-1625977)
chr2 (158-254)||(11513862-11513958)
chr2 (155-254)||(12464480-12464579)
chr2 (141-233)||(40158703-40158795)
chr2 (144-236)||(43910995-43911087)
chr2 (156-247)||(18066099-18066190)
chr2 (142-236)||(26626855-26626950)
chr2 (154-236)||(40279179-40279261)
chr2 (159-225)||(42621386-42621452)
chr2 (155-236)||(43279536-43279615)
chr2 (144-238)||(24347698-24347796)
chr2 (155-220)||(26202026-26202091)
chr2 (141-254)||(44438832-44438945)
chr2 (141-253)||(29316768-29316880)
chr2 (144-235)||(33931566-33931657)
chr2 (154-217)||(40279268-40279331)
chr2 (154-217)||(40279338-40279401)
chr2 (144-230)||(1893277-1893363)
chr2 (154-236)||(22681191-22681273)
chr2 (144-254)||(33942114-33942224)
chr2 (157-254)||(41241141-41241238)
chr2 (158-254)||(9395094-9395190)
chr2 (144-236)||(33941891-33941983)
chr2 (157-217)||(40279408-40279468)
chr2 (155-254)||(32592551-32592649)
chr2 (155-246)||(41851507-41851598)
chr2 (141-230)||(27663370-27663460)
chr2 (155-239)||(12194930-12195015)
chr2 (154-235)||(29628749-29628830)
chr2 (173-254)||(39073714-39073795)
chr2 (158-231)||(39983329-39983402)
chr2 (141-247)||(42907330-42907438)
chr2 (201-254)||(43199378-43199431)
chr2 (203-247)||(9750917-9750961)
chr2 (154-218)||(16451118-16451182)
chr2 (145-253)||(28039329-28039437)
chr2 (164-224)||(44590028-44590088)
chr2 (173-236)||(656802-656865)
chr2 (154-233)||(750656-750734)
chr2 (144-211)||(1939328-1939395)
chr2 (170-233)||(5759597-5759660)
chr2 (141-236)||(8017416-8017511)
chr2 (141-236)||(10563551-10563646)
chr2 (155-218)||(12289797-12289860)
chr2 (144-231)||(18179236-18179323)
chr2 (154-231)||(2142640-2142718)
chr2 (200-254)||(2360388-2360442)
chr2 (144-230)||(10285848-10285934)
chr2 (159-209)||(16398123-16398173)
chr2 (172-234)||(27695619-27695681)
chr2 (196-234)||(30990422-30990460)
chr2 (141-211)||(35379009-35379079)
chr2 (154-236)||(36043886-36043968)
chr2 (154-192)||(43511111-43511149)
chr2 (141-231)||(43984996-43985086)
chr2 (171-236)||(6167306-6167371)
chr2 (174-231)||(16353848-16353905)
chr2 (144-225)||(35485910-35485991)
[»] chr6 (25 HSPs)
chr6 (146-236)||(415286-415376)
chr6 (142-254)||(9093549-9093662)
chr6 (141-223)||(31624085-31624167)
chr6 (144-236)||(20368176-20368268)
chr6 (155-236)||(6536597-6536678)
chr6 (170-247)||(6909894-6909971)
chr6 (156-236)||(34430469-34430549)
chr6 (141-216)||(103433-103508)
chr6 (155-254)||(2735033-2735132)
chr6 (170-236)||(837238-837304)
chr6 (147-248)||(8364975-8365076)
chr6 (171-244)||(31812036-31812109)
chr6 (164-236)||(32386579-32386651)
chr6 (145-216)||(4420645-4420716)
chr6 (200-247)||(7485120-7485167)
chr6 (187-250)||(11784069-11784132)
chr6 (191-254)||(29274272-29274335)
chr6 (141-187)||(696633-696679)
chr6 (147-233)||(4246395-4246481)
chr6 (141-198)||(9912183-9912241)
chr6 (200-254)||(33828610-33828664)
chr6 (145-182)||(821835-821872)
chr6 (142-211)||(6647394-6647463)
chr6 (201-254)||(20671918-20671971)
chr6 (160-209)||(31624953-31625002)
[»] chr1 (64 HSPs)
chr1 (144-236)||(7218070-7218162)
chr1 (147-254)||(37842354-37842461)
chr1 (155-253)||(24915058-24915156)
chr1 (172-254)||(49888731-49888813)
chr1 (155-236)||(17603391-17603472)
chr1 (155-247)||(473135-473227)
chr1 (142-226)||(34290228-34290312)
chr1 (147-254)||(30371112-30371219)
chr1 (147-254)||(31517739-31517846)
chr1 (157-231)||(35179126-35179200)
chr1 (154-236)||(51695501-51695583)
chr1 (155-232)||(42174841-42174918)
chr1 (143-231)||(7136993-7137081)
chr1 (155-231)||(45975677-45975753)
chr1 (173-236)||(3234040-3234103)
chr1 (144-231)||(4622080-4622167)
chr1 (144-223)||(10809340-10809419)
chr1 (145-236)||(25479563-25479654)
chr1 (160-247)||(34952186-34952273)
chr1 (142-233)||(44422684-44422775)
chr1 (145-223)||(10799457-10799535)
chr1 (141-232)||(28689445-28689538)
chr1 (155-248)||(1510317-1510410)
chr1 (155-236)||(2777874-2777955)
chr1 (145-254)||(4576769-4576878)
chr1 (142-231)||(10199402-10199491)
chr1 (141-193)||(6292518-6292570)
chr1 (171-254)||(1432479-1432562)
chr1 (146-236)||(7472293-7472384)
chr1 (171-254)||(13809962-13810045)
chr1 (154-236)||(27820343-27820425)
chr1 (200-254)||(36070214-36070268)
chr1 (157-254)||(5592694-5592791)
chr1 (175-236)||(7244685-7244746)
chr1 (141-218)||(7262511-7262588)
chr1 (200-233)||(15515526-15515559)
chr1 (145-254)||(30257647-30257756)
chr1 (170-231)||(37241844-37241905)
chr1 (157-245)||(2294884-2294972)
chr1 (158-234)||(4200213-4200289)
chr1 (155-247)||(9656621-9656713)
chr1 (204-236)||(11218001-11218033)
chr1 (142-218)||(12564493-12564569)
chr1 (144-236)||(23445316-23445408)
chr1 (200-236)||(25006086-25006122)
chr1 (201-245)||(37295771-37295815)
chr1 (144-208)||(37593680-37593744)
chr1 (141-236)||(1565528-1565623)
chr1 (143-182)||(7575694-7575732)
chr1 (171-234)||(25005820-25005883)
chr1 (195-254)||(27738227-27738286)
chr1 (154-233)||(35590898-35590977)
chr1 (155-254)||(47432060-47432158)
chr1 (143-193)||(5886989-5887039)
chr1 (141-219)||(10744300-10744378)
chr1 (142-180)||(24460401-24460439)
chr1 (157-219)||(26779934-26779996)
chr1 (144-225)||(3224416-3224497)
chr1 (200-233)||(12564926-12564959)
chr1 (156-233)||(15558202-15558279)
chr1 (141-218)||(27140478-27140555)
chr1 (141-190)||(30815646-30815695)
chr1 (201-234)||(33976163-33976196)
chr1 (142-211)||(41195187-41195256)
[»] chr4 (47 HSPs)
chr4 (144-226)||(42121480-42121561)
chr4 (154-254)||(17884032-17884132)
chr4 (154-235)||(35571637-35571718)
chr4 (141-235)||(29263353-29263447)
chr4 (144-254)||(42685388-42685498)
chr4 (157-236)||(40174545-40174624)
chr4 (147-233)||(7694009-7694095)
chr4 (155-225)||(17822872-17822942)
chr4 (200-254)||(25885823-25885877)
chr4 (154-239)||(1706601-1706686)
chr4 (141-254)||(52746833-52746946)
chr4 (144-236)||(2996555-2996647)
chr4 (144-236)||(50800026-50800117)
chr4 (154-254)||(51630075-51630175)
chr4 (155-247)||(53294121-53294213)
chr4 (146-231)||(9841053-9841137)
chr4 (157-224)||(11802528-11802595)
chr4 (155-226)||(50662745-50662816)
chr4 (155-254)||(54069424-54069523)
chr4 (155-254)||(55414427-55414526)
chr4 (158-224)||(6364143-6364209)
chr4 (144-218)||(27721717-27721791)
chr4 (164-254)||(47118981-47119071)
chr4 (154-236)||(49202627-49202709)
chr4 (155-253)||(50681096-50681194)
chr4 (141-254)||(24929457-24929570)
chr4 (171-227)||(1203139-1203195)
chr4 (154-254)||(3155567-3155667)
chr4 (174-254)||(9760404-9760484)
chr4 (172-247)||(22666459-22666535)
chr4 (142-234)||(23459612-23459704)
chr4 (171-247)||(27043853-27043929)
chr4 (157-236)||(8468930-8469009)
chr4 (202-253)||(47946163-47946214)
chr4 (144-210)||(825486-825552)
chr4 (171-233)||(16200004-16200066)
chr4 (159-225)||(16494816-16494882)
chr4 (141-247)||(28300292-28300398)
chr4 (141-235)||(30066759-30066853)
chr4 (159-233)||(30207582-30207656)
chr4 (141-223)||(43932430-43932512)
chr4 (201-234)||(2465972-2466005)
chr4 (157-218)||(11158366-11158427)
chr4 (190-231)||(24444025-24444066)
chr4 (172-221)||(28615331-28615380)
chr4 (171-236)||(29778777-29778842)
chr4 (163-236)||(50004159-50004232)
[»] chr7 (46 HSPs)
chr7 (154-254)||(39967884-39967984)
chr7 (165-236)||(24909646-24909717)
chr7 (155-254)||(40688993-40689092)
chr7 (173-254)||(420324-420405)
chr7 (144-253)||(12110325-12110434)
chr7 (141-236)||(9038094-9038188)
chr7 (154-236)||(38010696-38010778)
chr7 (158-236)||(44821941-44822019)
chr7 (144-233)||(25670582-25670671)
chr7 (170-230)||(20526951-20527011)
chr7 (154-254)||(33678744-33678844)
chr7 (173-236)||(34744010-34744073)
chr7 (145-211)||(7244687-7244753)
chr7 (141-247)||(8094241-8094347)
chr7 (154-236)||(39907785-39907867)
chr7 (144-254)||(48157116-48157226)
chr7 (155-220)||(19022592-19022657)
chr7 (175-236)||(24895338-24895399)
chr7 (171-236)||(30812130-30812195)
chr7 (141-226)||(33673069-33673154)
chr7 (164-225)||(46104583-46104644)
chr7 (173-218)||(47130810-47130855)
chr7 (171-236)||(47177618-47177683)
chr7 (142-219)||(47559595-47559672)
chr7 (174-254)||(119874-119954)
chr7 (158-254)||(22283754-22283850)
chr7 (206-254)||(30180015-30180063)
chr7 (144-211)||(529382-529449)
chr7 (173-236)||(5569661-5569724)
chr7 (159-254)||(20526410-20526505)
chr7 (170-225)||(45790447-45790502)
chr7 (171-254)||(46104325-46104408)
chr7 (141-183)||(425817-425859)
chr7 (200-254)||(1417228-1417282)
chr7 (170-236)||(20881658-20881724)
chr7 (145-219)||(25130086-25130160)
chr7 (200-230)||(28076545-28076575)
chr7 (144-254)||(30535527-30535637)
chr7 (167-233)||(31771712-31771778)
chr7 (200-254)||(34083577-34083631)
chr7 (158-236)||(39393589-39393665)
chr7 (141-187)||(43219637-43219683)
chr7 (154-236)||(17248537-17248616)
chr7 (179-236)||(18350738-18350795)
chr7 (141-218)||(18749810-18749887)
chr7 (172-245)||(43694594-43694667)
[»] chr8 (37 HSPs)
chr8 (156-236)||(10114471-10114551)
chr8 (144-253)||(2594993-2595102)
chr8 (154-239)||(7514557-7514642)
chr8 (157-228)||(31862483-31862554)
chr8 (158-237)||(43504732-43504811)
chr8 (142-236)||(12361174-12361268)
chr8 (144-254)||(21653045-21653155)
chr8 (154-248)||(27049337-27049430)
chr8 (158-247)||(7918783-7918872)
chr8 (154-231)||(9956820-9956897)
chr8 (155-236)||(27028813-27028894)
chr8 (154-218)||(1930035-1930099)
chr8 (165-254)||(3537046-3537137)
chr8 (156-236)||(10120738-10120818)
chr8 (143-211)||(20672757-20672825)
chr8 (161-224)||(14247237-14247300)
chr8 (145-236)||(24558835-24558926)
chr8 (142-225)||(30389092-30389175)
chr8 (142-248)||(37353243-37353349)
chr8 (160-254)||(38602297-38602391)
chr8 (155-236)||(8062506-8062587)
chr8 (141-218)||(11569450-11569527)
chr8 (200-236)||(9834841-9834877)
chr8 (141-233)||(10383870-10383962)
chr8 (159-247)||(25930565-25930653)
chr8 (141-233)||(42215299-42215391)
chr8 (155-218)||(30251461-30251524)
chr8 (172-254)||(35534637-35534717)
chr8 (144-247)||(38421235-38421338)
chr8 (157-236)||(38874628-38874707)
chr8 (141-179)||(3254264-3254302)
chr8 (200-254)||(16733993-16734047)
chr8 (157-231)||(28769348-28769422)
chr8 (200-254)||(34770856-34770910)
chr8 (156-254)||(38648315-38648413)
chr8 (141-234)||(12851160-12851253)
chr8 (190-231)||(35869824-35869865)
[»] scaffold0652 (1 HSPs)
scaffold0652 (188-231)||(3003-3046)
[»] scaffold0475 (1 HSPs)
scaffold0475 (207-236)||(11814-11843)


Alignment Details
Target: chr5 (Bit Score: 686; Significance: 0; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 686; E-Value: 0
Query Start/End: Original strand, 14 - 736
Target Start/End: Original strand, 6586973 - 6587695
Alignment:
Q  14 catagggaaaatgtaatacttaacaagctctcttatatgatgataatgaatacgcgcctgtttagcttatatgaattcatctactgctataactacttgt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6586973 catagggaaaatgtaatacttaacaagctctcttatatgatgataatgaatacgcgcctgtttagcttatatgaattcatctactgctataactacttgt 6587072  T
Q  114 taaactgtttggaagaacttnnnnnnncagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaac 213  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6587073 taaactgtttggaagaacttaaaaaaacagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatagcttatgaaaacaac 6587172  T
Q  214 ttatagcttatacgaaaacaattgaagtttatttaatctttaccgatcacttcactgtcgattacagtagcagaaaaaataaaggtatacataaacatca 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6587173 ttatagcttatacgaaaacaattgaagtttatttaatctttaccgatcacttcactgtcgattacagtagcagaaaaaataaaggtatacataaacatca 6587272  T
Q  314 tagaataagattgaagaacaagtaaagatttgaaatagttacctccaatgctcttttatcctcgcgatacaaactgctctatttcctgtaagcctcaaac 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6587273 tagaataagattgaagaacaagtaaagatttgaaatagttacctccaatgctcttttatcctcgcgatacaaactgctctatttcctgtaagcctcaaac 6587372  T
Q  414 catgtttccgcaaatacgctttgcattcgtttaatttcaacgaatctatatcctttccacctgagaaatcgaatactgaattcaataaacatgatcgatt 513  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  6587373 catgtttccgcaaatacgctttgcattcgtttaatttcaacgaatctatatcctttccacctgagaaatcgaatactgaattcaaataacatgatcgatt 6587472  T
Q  514 cgatacattattgttaatttacaattgatgatttggtagaaataaaaaccttgaaggagagaaacaacttttttggagagagattcgtcatcaacatcac 613  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6587473 cgatacattattgttaatttacaattgatgatttggtagaaataaaaaccttgaaggagagaaacaactttttcggagagagattcgtcatcaacatcac 6587572  T
Q  614 aattatctgatcccgaagcttcatcgcgatcttcttcatcatcttcctcatcttcaatttcacaggtatctgattgggacgagtcatcgcaatcggtgtt 713  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6587573 aattatctgatcccgaagcttcatcgcgatcttcttcatcatcttcctcatcttcaatttcacaggtatctgattgggacgagtcatcgcaatcggtgtt 6587672  T
Q  714 ttgttcttcggaatcgtcgtcgt 736  Q
    |||||||||||||||||||||||    
T  6587673 ttgttcttcggaatcgtcgtcgt 6587695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 9202740 - 9202854
Alignment:
Q  141 cagcttatgacag-gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaa 239  Q
    ||||||||||||  ||||||||||||||| ||||||||||||| ||||||| ||  ||| |||||||||||| ||||| ||||||| |||||||||| ||    
T  9202740 cagcttatgacattgttcataagctgtttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaa 9202839  T
Q  240 gtttatttaatcttt 254  Q
     ||||||| ||||||    
T  9202840 ctttattttatcttt 9202854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 7674722 - 7674612
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttt 243  Q
    ||||||||| ||| ||||| ||||| |||||||||||||||| |||||||  ||| ||||||||||||  |||| ||||||| |||||||||| || |||    
T  7674722 cttatgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaacattttatggcttataagaaaacaatttaaattt 7674623  T
Q  244 atttaatcttt 254  Q
    |||| ||||||    
T  7674622 attttatcttt 7674612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 12425631 - 12425535
Alignment:
Q  158 ataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||| ||||| || |||||||||| ||||||||||  ||| ||| |||||||| |||||||||||||||||||||||| || ||||||| ||||||    
T  12425631 ataagttgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttt 12425535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 39105542 - 39105446
Alignment:
Q  141 cagcttatgacag-gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||||||  ||||||||||| |||  |||||||||||| ||||||||||  ||| ||||||||||||  |||||||||||||||||||||||    
T  39105542 cagcttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaatt 39105446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 16457971 - 16458073
Alignment:
Q  141 cagcttatgacaggtt-cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaa 239  Q
    ||||||||||||| || |||||||| ||| ||| |||||||||||||||||||| | || || || ||||||||||||||| ||||| ||||||||| ||    
T  16457971 cagcttatgacagttttcataagctcttttcagtttattttcacaagttctccaatttagctcataaaaacaacttatagcatatacaaaaacaatttaa 16458070  T
Q  240 gtt 242  Q
    |||    
T  16458071 gtt 16458073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 254
Target Start/End: Original strand, 16937890 - 16937989
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||| ||| ||||||||||||  |||||||||| |||| | ||| ||||||||||||||| ||||| ||||||||| ||  |||||| ||||||    
T  16937890 ttcataagcttttttcagcttattttcctaagttctccaatatagcgtataaaaacaacttatagcatatacaaaaacaatttaacgttattttatcttt 16937989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 2568735 - 2568645
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    ||||||||||||  |||||||| | |||  ||||||||||||  || ||||||  ||| ||||||||||||||||||||||||||||||||    
T  2568735 cagcttatgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaacttatagcttatacgaaaa 2568645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 37526197 - 37526283
Alignment:
Q  146 tatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaac 232  Q
    ||||||| ||| ||||||||||| |||||||||| || ||| ||||||  | | |||||||||||||||||||||||||| ||||||    
T  37526197 tatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaacaacttatagcttatatgaaaac 37526283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 37588370 - 37588444
Alignment:
Q  158 ataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaac 232  Q
    ||||||||||| |||||||||| || ||| ||||||  ||| |||||||||||||||||||||||||| ||||||    
T  37588370 ataagctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaac 37588444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 10272442 - 10272519
Alignment:
Q  159 taagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||| ||||| ||||||||||||| ||  ||||||  ||  |||||||||||||||||||||||||||||||||||||    
T  10272442 taagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaacaatt 10272519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 42582976 - 42582876
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 253  Q
    |||||||| ||||||  |||||||||||| |||||||||| |||| ||||  |||||| |||||| |||| ||||| |||||| || ||||||| |||||    
T  42582976 gttcataaactgttttgagcttattttcataagttctccaatatagcttacaaaaacagcttataccttaaacgaacacaatttaactttatttcatctt 42582877  T
Q  254 t 254  Q
    |    
T  42582876 t 42582876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 4014430 - 4014493
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttat 217  Q
    ||||||||||||||| ||||||||||||| ||||||||||  ||| |||||||||||| |||||    
T  4014430 gttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagcttat 4014493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 37690634 - 37690721
Alignment:
Q  146 tatgacaggttcataagctgtttacagcttattttcacaagttctccactatatctt-atgaaaacaacttatagcttatacgaaaac 232  Q
    ||||||| ||| ||||||||||| |||||||||| || ||| ||||||  ||| ||| ||||||||||||||||||||||| ||||||    
T  37690634 tatgacatgttaataagctgttttcagcttatttccataagctctccataataactttatgaaaacaacttatagcttatatgaaaac 37690721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 41957444 - 41957539
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||| || |||||| ||||| || |||||||||| |||||||| |  ||| |||||||||||| |||||| |||| | ||||||||||    
T  41957444 cagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaatt 41957539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 254
Target Start/End: Complemental strand, 42583219 - 42583113
Alignment:
Q  148 tgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 247  Q
    ||||| ||| |||| |||||| |||||||  |||| ||||||||||| |||  ||||||||||| |||||  |||| |||||||||||| || |||||||    
T  42583219 tgacatgtttataaactgttttcagcttacattcataagttctccacgataaattatgaaaacagcttatcccttacacgaaaacaatttaactttattt 42583120  T
Q  248 aatcttt 254  Q
     ||||||    
T  42583119 catcttt 42583113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 15308987 - 15309076
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    ||||||||| | |||||||| |||||| || |||||||||| ||| |||| |  ||| || ||||||||||||||||||||||| |||||    
T  15308987 agcttatgatatgttcataacctgttttcatcttattttcataagatctcaatgatagctaatgaaaacaacttatagcttataagaaaa 15309076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 17258877 - 17258966
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    ||||||||||| ||||||||||||||| ||||||||||||| ||| ||| ||  |||  ||||||||||| ||||| | || ||||||||    
T  17258877 agcttatgacatgttcataagctgttttcagcttattttcataagctcttcaggatagtttatgaaaacagcttattgattgtacgaaaa 17258966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 233
Target Start/End: Complemental strand, 3977385 - 3977293
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    |||||||||||| |||| | |||||| | ||||||||||||| || |||||||| | | |||||||||||| ||||| | |||||| ||||||    
T  3977385 cagcttatgacatgttccttagctgtcttcagcttattttcataatttctccacaacaacttatgaaaacagcttatgggttatacaaaaaca 3977293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 7985033 - 7984965
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagctt 222  Q
    ||||||||||||||| ||||||||||||| || |||||||  ||| |||||||||| | ||||||||||    
T  7985033 gttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaaaagcttatagctt 7984965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 248
Target Start/End: Original strand, 14674893 - 14675001
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagc-ttatacgaaaacaattgaa 239  Q
    |||||||||||| ||| |||| ||||||  | | |||||||| ||||||| ||  ||||||||||| ||||||||||||| ||||||| || ||||| ||    
T  14674893 cagcttatgacatgtttataaactgttttaaacatattttcataagttctacaggatatcttatgagaacaacttatagctttatacggaatcaatttaa 14674992  T
Q  240 gtttattta 248  Q
     ||||||||    
T  14674993 ctttattta 14675001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 15074758 - 15074822
Alignment:
Q  157 cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagct 221  Q
    |||||||||||| |||||||||| || ||| | |||| |||| ||||||||||||||||||||||    
T  15074758 cataagctgttttcagcttatttccataagctttccagtataacttatgaaaacaacttatagct 15074822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 16863856 - 16863745
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagt 241  Q
    ||||||| ||| |||| |||| ||||| |||||||||||||||||||  |||  ||| || ||||||||| |||||| ||| || |||| || ||| |||    
T  16863856 agcttataacatgttcttaagttgttttcagcttattttcacaagttaaccatgataactgatgaaaacagcttataacttgtatgaaaccagttg-agt 16863758  T
Q  242 ttatttaatcttt 254  Q
    |||||||||||||    
T  16863757 ttatttaatcttt 16863745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 32703269 - 32703348
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagc 220  Q
    |||||||||||| ||| |||| |||||| ||||||||||| | || ||||||   ||| |||||||||||||||||||||    
T  32703269 cagcttatgacacgtttataaactgttttcagcttatttttataaattctcctagatagcttatgaaaacaacttatagc 32703348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 42569813 - 42569722
Alignment:
Q  163 ctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||| ||||||||||| | ||||||||||   || |||||||| ||| ||||||||||| ||||||||||||  | ||||| ||||||||    
T  42569813 ctgttttcagcttatttttataagttctccaagctaccttatgaagacagcttatagcttagacgaaaacaatttcactttatgtaatcttt 42569722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 11700208 - 11700146
Alignment:
Q  173 cttattttcacaagttctccactatatcttatgaaaacaacttat-agcttatacgaaaacaa 234  Q
    |||||||||| ||||||||||| ||| | ||| |||||||||||| |||||||||||||||||    
T  11700208 cttattttcataagttctccacgatagcatatcaaaacaacttataagcttatacgaaaacaa 11700146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 25461139 - 25461061
Alignment:
Q  170 cagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttattta 248  Q
    |||||||||||||  ||||||||| || | ||||||||||||||||||| | ||||| ||||||||  || ||||||||    
T  25461139 cagcttattttcatcagttctccaatagagcttatgaaaacaacttataacatatacaaaaacaatacaactttattta 25461061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 27298112 - 27298066
Alignment:
Q  179 ttcacaagttctccactatatcttatgaaaacaacttatagcttata 225  Q
    ||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  27298112 ttcacaagttctccaatatatcttataaaaacaacttatagcatata 27298066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 34160795 - 34160713
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||| |||||| ||||||||||||| ||||||||||  |||||| ||||||| | ||||||  || |||||||| ||||    
T  34160795 gttcataaactgttttcagcttattttcataagttctccaagatatctaatgaaaatagcttataaattttacgaaaagaatt 34160713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 41534516 - 41534437
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagctt 222  Q
    |||||||||||  ||||||||||||||| ||| ||||||   ||||||||| |  ||| |||||||||||||||||||||||    
T  41534516 cagcttatgac--gttcataagctgttttcagattatttcttcaagttctcaaaaatagcttatgaaaacaacttatagctt 41534437  T

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Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 17368750 - 17368661
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    ||||||||| ||||||| || |||| |||||||||| || ||  ||||||  ||| |||||||||||||||||||| ||| || ||||||    
T  17368750 cttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttatagattacacaaaaaca 17368661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 39594866 - 39594789
Alignment:
Q  159 taagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||| ||||| ||||||||||||| ||||||  ||  |||||||||||||||| |||| | ||||| |||||||||||    
T  39594866 taagttgttttcagcttattttcataagttcaacaagatatcttatgaaaacagcttacaacttatgcgaaaacaatt 39594789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 25461312 - 25461404
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||| |||||| |||||||| ||||||||||||| || | | |||  |||  |||||||||||  ||||||||||| | |||||||||    
T  25461312 cttatgacatgttcattagctgttttcagcttattttcataaatacgccaagataggttatgaaaacagtttatagcttatgcaaaaacaatt 25461404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 28777038 - 28776978
Alignment:
Q  173 cttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    ||||||||||  |||||||||  ||| |||||||||||| |||||||| ||||||||||||    
T  28777038 cttattttcattagttctccaagatagcttatgaaaacagcttatagcctatacgaaaaca 28776978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 36318833 - 36318761
Alignment:
Q  159 taagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    |||||||||| |||||||||| || || |||||||  ||| ||||||||||||||||| | ||||||| ||||    
T  36318833 taagctgttttcagcttatttacataaattctccaagatagcttatgaaaacaacttaaaacttatacaaaaa 36318761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 1465028 - 1465094
Alignment:
Q  156 tcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagctta 223  Q
    ||||||| ||||| |||||||||||||||||| |||||  ||| ||||| |||| |||||||||||||    
T  1465028 tcataagttgttttcagcttattttcacaagtcctccaagatagcttat-aaaataacttatagctta 1465094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 7319454 - 7319379
Alignment:
Q  170 cagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttat 245  Q
    ||||||||||| | ||||||||||  ||| |||| |||||||  |||||||||||| |||||||||| || |||||    
T  7319454 cagcttatttttataagttctccaagatagcttacgaaaacagtttatagcttatatgaaaacaatttaactttat 7319379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 18543192 - 18543282
Alignment:
Q  143 gcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaa 234  Q
    |||||||||| || ||| || ||||| |||||||||| || ||| ||||||  ||| ||||||||||||||||||| ||||||  |||||||    
T  18543192 gcttatgacatgtccatgagttgttttcagcttattt-cataagctctccaggatagcttatgaaaacaacttatatcttatataaaaacaa 18543282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 29925886 - 29925839
Alignment:
Q  173 cttattttcacaagttctccactatatcttatgaaaacaacttatagc 220  Q
    |||||||||| |||||||||| |||| |||||| ||||||||||||||    
T  29925886 cttattttcataagttctccaatatagcttatgtaaacaacttatagc 29925839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 37914770 - 37914735
Alignment:
Q  201 ttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||| |||||||||||||||||||||||    
T  37914770 ttatgaaaacaatttatagcttatacgaaaacaatt 37914735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 13244534 - 13244568
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaa 234  Q
    |||||||||||||||||||| ||||||||||||||    
T  13244534 cttatgaaaacaacttatagtttatacgaaaacaa 13244568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 17560436 - 17560502
Alignment:
Q  170 cagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||||||||||||| |  ||| ||||| |||||| |||||| |||||| ||||| ||||    
T  17560436 cagcttattttcacaagttctcgaagataacttataaaaacagcttataccttatatgaaaataatt 17560502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 19138714 - 19138807
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttcacaagttctccact--atatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||| || |||||  ||||| |||||||||| || ||| ||||||    ||| |||||||||||||||||||||||||  ||||||||||    
T  19138714 ttatgacatgtacataaattgttttcagcttatttccataagctctccatataatagcttatgaaaacaacttatagcttatctgaaaacaatt 19138807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 32172727 - 32172637
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaa 234  Q
    ||||||||| || |||||||  ||| |||||||||| ||  |||||| ||  ||| |||||||||||| ||||||||||||| | ||||||    
T  32172727 cttatgacatgtccataagccattttcagcttatttccattagttcttcatgatagcttatgaaaacagcttatagcttatatgtaaacaa 32172637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 443994 - 443921
Alignment:
Q  159 taagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaac 232  Q
    |||||||||| |||||||| | || |||  |||||  ||| |||||||||||| |||||||||||||| |||||    
T  443994 taagctgtttccagcttatctccaaaagcactccaagatagcttatgaaaacatcttatagcttatacaaaaac 443921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 5559740 - 5559707
Alignment:
Q  203 atgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||||||||||||||| |||||||||    
T  5559740 atgaaaacaacttatagcttatactaaaacaatt 5559707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 11707128 - 11707055
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttata 218  Q
    |||||||| ||| ||||| ||||| ||||||||||||| ||| ||| ||  ||| |||||||||||| ||||||    
T  11707128 ttatgacatgtttataagttgttttcagcttattttcaaaagctctacaagatagcttatgaaaacagcttata 11707055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 14295583 - 14295470
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaag 240  Q
    |||||||||| | ||  ||||||||||| ||||||| ||  | ||| ||||||  ||| |||| ||||||| ||||||||||||| ||||||| ||  |     
T  14295583 cagcttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaaacagcttatagcttatatgaaaacagtttgac 14295484  T
Q  241 tttatttaatcttt 254  Q
    ||||||| ||||||    
T  14295483 tttattttatcttt 14295470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 14364269 - 14364224
Alignment:
Q  188 tctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    |||||| ||||  ||||||||||||| |||||||||||||||||||    
T  14364269 tctccattataatttatgaaaacaacgtatagcttatacgaaaaca 14364224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 8e-23; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 21367745 - 21367638
Alignment:
Q  141 cagcttatgacag-gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaa 239  Q
    ||||||||||||  ||||| ||||||||| ||||||||||||| ||||||||||  ||| |||||||||||||||||||  |||||||||||||||| ||    
T  21367745 cagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttatacattatacgaaaacaatttaa 21367646  T
Q  240 gtttattt 247  Q
     |||||||    
T  21367645 ctttattt 21367638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 1816657 - 1816547
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttt 243  Q
    |||||||||  |||||| ||||||| ||||||||||| | ||| |||||| |||| ||||||||||||||||||| ||||||| |||||| ||  | |||    
T  1816657 cttatgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttatacaaaaacagtttgacttt 1816558  T
Q  244 atttaatcttt 254  Q
    |||| ||||||    
T  1816557 attttatcttt 1816547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 251
Target Start/End: Complemental strand, 52619076 - 52618970
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttta 244  Q
    |||||||| ||||||||||| ||| || |||||||||||||| ||| ||  ||| ||| |||||||| |||||| |||||| |||||||||| || ||||    
T  52619076 ttatgacatgttcataagctattttcaccttattttcacaagctcttcaagatagcttgtgaaaacagcttataacttatatgaaaacaatttaacttta 52618977  T
Q  245 tttaatc 251  Q
    |||||||    
T  52618976 tttaatc 52618970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 402534 - 402630
Alignment:
Q  141 cagcttatgacag-gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||||||  ||||||||||||||| ||||||| ||||||||||||| ||  |||  |||| |||||| |||||| |||||||||||||||||    
T  402534 cagcttatgacattgttcataagctgttttcagcttaatttcacaagttcttcaagatagattataaaaacagcttataacttatacgaaaacaatt 402630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 45541648 - 45541553
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||| ||||||||||||||| ||| ||||| ||| ||||| ||||  ||| |||||||||| ||  ||||||||||||||||| ||||    
T  45541648 cagcttatgacatgttcataagctgttttcaggttattctcataagttatccaagatagcttatgaaaataaactatagcttatacgaaaataatt 45541553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 31403422 - 31403322
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 253  Q
    ||||||||| ||||||||||||||||||||| ||||||||  ||| |  | ||||||||||| || |||||||||||||| || || || |||| |||||    
T  31403422 gttcataagttgtttacagcttattttcacaggttctccaagatagccaacgaaaacaacttgtatcttatacgaaaacattttaacttcattttatctt 31403323  T
Q  254 t 254  Q
    |    
T  31403322 t 31403322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 36783340 - 36783440
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 253  Q
    ||||||||||||||| |||||||| |||| || | ||||| |||| |||||||||||| || |||| ||||| ||||||||||  | ||||||| |||||    
T  36783340 gttcataagctgttttcagcttatattcataattgctccaatatagcttatgaaaacagctaatagtttatatgaaaacaattttactttattttatctt 36783439  T
Q  254 t 254  Q
    |    
T  36783440 t 36783440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 39980807 - 39980727
Alignment:
Q  141 cagcttatgacaggtt-cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagc 220  Q
    ||||||||||| |||| |||||||| ||| || |||||||||| |||||||||| |||| ||||| |||||||||||||||    
T  39980807 cagcttatgactggtttcataagcttttttcaacttattttcataagttctccaatatagcttataaaaacaacttatagc 39980727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 50600191 - 50600254
Alignment:
Q  161 agctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttat 224  Q
    |||||||| ||||||||||||| |||||||||| |||| || ||||||||| ||||||||||||    
T  50600191 agctgttttcagcttattttcataagttctccaatatagctgatgaaaacagcttatagcttat 50600254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 254
Target Start/End: Original strand, 53789468 - 53789567
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||| ||| ||||||| ||||| ||||||||||  ||| ||||||| ||||||||||||| ||||| |||||| || || |||| || ||||||    
T  53789468 ttcataagcttttttcagcttaatttcataagttctccatgatagcttatgataacaacttatagcatataccaaaacattttaattttagttcatcttt 53789567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 253
Target Start/End: Complemental strand, 14145959 - 14145877
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 253  Q
    |||||||||||| ||||  ||||  ||| |||||||||| |||||||||| ||||||||||||||| || ||||||| |||||    
T  14145959 agcttattttcataagtaatccaagatagcttatgaaaataacttatagcatatacgaaaacaatttaactttattttatctt 14145877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 14548735 - 14548805
Alignment:
Q  162 gctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaac 232  Q
    ||||||| |||||||||| || ||| ||||||  ||| |||||||||||||||||||||||||| ||||||    
T  14548735 gctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaac 14548805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 24085344 - 24085414
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttat 224  Q
    ||||||| ||||||| ||||||||||||||||||||||||  ||| ||||  ||||||| |||||||||||    
T  24085344 gttcatacgctgttttcagcttattttcacaagttctccaagatagcttacaaaaacaaattatagcttat 24085414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 39602203 - 39602289
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacg 227  Q
    |||||||||||| ||||||||  ||||| || |||||||||| |||||||| |  ||| |||||||||||| |||||| ||||||||    
T  39602203 cagcttatgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaacagcttataacttatacg 39602289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 44061032 - 44061129
Alignment:
Q  156 tcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||||||  |||||| ||||| |||||||| |  ||||| ||||||||||||||||||||||||  ||||||||| ||  |||||| ||||||    
T  44061032 tcataagctgtttt-agcttaatttcataagttctctaagatatcatatgaaaacaacttatagcttatagaaaaacaatttaaccttattttatcttt 44061129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 40665500 - 40665411
Alignment:
Q  147 atgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||| ||||||||||||||| ||||||||||| | ||| ||||||  ||| |||||||||||| |||||| |||| || |||| ||||    
T  40665500 atgacatgttcataagctgttttcagcttatttttataagctctccaagataacttatgaaaacatcttataacttacacaaaaataatt 40665411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 1217793 - 1217888
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||| || |||||| ||||| || |||| ||||| |||||||| |  ||| |||||||||||| |||||| |||| | ||||||||||    
T  1217793 cagcttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaatt 1217888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 28622006 - 28622085
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaa 234  Q
    |||||||||||||| ||| ||||||||| |||||||| |  |||  ||||||||||| ||||||||||| || |||||||    
T  28622006 ttcataagctgttttcaggttattttcataagttctcgaagatagtttatgaaaacagcttatagcttacacaaaaacaa 28622085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 4401122 - 4401029
Alignment:
Q  141 cagcttatgacaggttc-ataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||||||  ||| |||||||||||  | |||||||||| |||||||||| |||| ||||   |||||||||||||| |||||||||| ||||    
T  4401122 cagcttatgacaatttccataagctgtttttaacttattttcataagttctccaatataactta---aaacaacttatagcatatacgaaaataatt 4401029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 12862284 - 12862353
Alignment:
Q  184 aagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||| |||| ||||||||||||||||||||| ||||| ||||||||| || | ||||| ||||||    
T  12862284 aagttctccaatatagcttatgaaaacaacttatagcatatac-aaaacaatttaaatctattttatcttt 12862353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 25447296 - 25447350
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||||||  ||||||||||||| ||||||||| |||||||||| ||||||    
T  25447296 cttatgaaaacagtttatagcttatacaaaaacaatttaagtttattttatcttt 25447350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 253
Target Start/End: Complemental strand, 30443956 - 30443858
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 253  Q
    |||| ||||| ||| ||||||||||||| |||||||||| ||||  |||| |||||| |||||||| ||||| ||| ||||| || || |||| |||||    
T  30443956 ttcacaagcttttttcagcttattttcataagttctccaatatagtttataaaaacagcttatagcatatacaaaagcaatttaacttcattttatctt 30443858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 30956662 - 30956732
Alignment:
Q  184 aagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||||  ||| ||| ||||||||||||||||| ||||| ||||||||| || ||||||| ||||||    
T  30956662 aagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatcttt 30956732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 30972474 - 30972544
Alignment:
Q  184 aagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||||  ||| ||| ||||||||||||||||| ||||| ||||||||| || ||||||| ||||||    
T  30972474 aagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatcttt 30972544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 36139955 - 36139866
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactata-tcttatgaaaacaacttatagcttatacgaaa 230  Q
    |||||||||||| ||||| ||||||||| ||||||||||||| ||| ||| ||  ||| | | ||| ||||||||||||||||||||||||    
T  36139955 cagcttatgacatgttcacaagctgttttcagcttattttcataagctcttcaagatagtataatg-aaacaacttatagcttatacgaaa 36139866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 36887574 - 36887504
Alignment:
Q  148 tgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttata 218  Q
    ||||| ||||||||| ||||| ||||||||||||| ||||||| ||  ||  |||||||||||||||||||    
T  36887574 tgacatgttcataagatgttttcagcttattttcataagttcttcaagatggcttatgaaaacaacttata 36887504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 37788878 - 37788824
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||||||||||||| ||||||||||| ||||| | ||||||| ||||||    
T  37788878 cttatgaaaacaacttatagattatacgaaaataattggactttattttatcttt 37788824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 44295584 - 44295522
Alignment:
Q  163 ctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttata 225  Q
    |||||| |||||||||| || ||| |||||  ||||||||||||||||||||||||| |||||    
T  44295584 ctgttttcagcttatttccataagctctccgatatatcttatgaaaacaacttatagattata 44295522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 236
Target Start/End: Original strand, 52440656 - 52440750
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||||| ||||||||| ||||| || || ||||||| ||||||| ||  |||  ||||||||| | ||||||||||||  ||||||||||    
T  52440656 agcttatgacatgttcataagttgttttcaactaattttcataagttcttcaagataaattatgaaaatagcttatagcttatttgaaaacaatt 52440750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 20880539 - 20880458
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||| |||  |||||||||||| |||||||||| |||| ||| | ||||||  ||||||| ||||| |||||||||    
T  20880539 ttcataagcttttttgagcttattttcataagttctccaatatagcttttaaaaacagtttatagcatatacaaaaacaatt 20880458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 22203474 - 22203417
Alignment:
Q  174 ttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    ||||||||| ||||||||||  ||| |||||||||||||||||||| |||||| ||||    
T  22203474 ttattttcataagttctccaagatagcttatgaaaacaacttatagattatacaaaaa 22203417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 33883748 - 33883821
Alignment:
Q  146 tatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatag 219  Q
    ||||||| ||||||||| ||||| ||||||||||||| |||||||| |  ||| |||||| ||||||| |||||    
T  33883748 tatgacatgttcataagttgttttcagcttattttcataagttctctaagatagcttatgtaaacaacatatag 33883821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 36631058 - 36631139
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||| ||||| ||| | ||||||||||| |||||||||| |||| || || ||||||||||||||| | ||| |||||||||    
T  36631058 ttcaaaagcttttttctgcttattttcataagttctccaatatagctcataaaaacaacttatagcatgtacaaaaacaatt 36631139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 49465658 - 49465769
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaag 240  Q
    |||||||| ||| |||||| || | |||  ||||||||| || |||||||||| |||| |||||||||||||| | |||| |||||||||| |||| ||     
T  49465658 cagcttattacatgttcattaggttttttaagcttatttccataagttctccagtatagcttatgaaaacaacatttagc-tatacgaaaaaaatt-aac 49465755  T
Q  241 tttatttaatcttt 254  Q
    ||||||| ||||||    
T  49465756 tttattttatcttt 49465769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 18405854 - 18405914
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    |||||| ||||| ||||||||||  ||| ||||||||||||||||||||| ||||| ||||    
T  18405854 agcttaatttcataagttctccaagatagcttatgaaaacaacttatagcatatacaaaaa 18405914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 20669244 - 20669172
Alignment:
Q  146 tatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttata 218  Q
    ||||||| ||||||||||||||| | |||||||| || ||| ||||||  ||| |||||||||||| ||||||    
T  20669244 tatgacatgttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaacagcttata 20669172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 24235681 - 24235760
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttata 225  Q
    |||||||| || | || ||||||| |||||||||| |||||  || ||| |||| ||||||||||||||||||||||||||    
T  24235681 ttatgacatgtccttatgctgttttcagcttatttacacaacgtc-ccaatatagcttatgaaaacaacttatagcttata 24235760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 33046830 - 33046886
Alignment:
Q  169 acagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttata 225  Q
    ||||||||| |||| |||||||||  || | ||||||||||||||||||||||||||    
T  33046830 acagcttatgttcataagttctcctgtacagcttatgaaaacaacttatagcttata 33046886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 33405162 - 33405266
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttat-tttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtt 242  Q
    ||||||| | |||||||| |||||| | |||||  ||||| ||||||| ||  ||| |||||||||||| ||||||||||||| |||||||| | || ||    
T  33405162 cttatgatatgttcataaactgttttcggcttaactttcataagttcttcaagatagcttatgaaaacagcttatagcttatatgaaaacaaattaactt 33405261  T
Q  243 tattt 247  Q
    |||||    
T  33405262 tattt 33405266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 50952410 - 50952314
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaact-tatagcttatacgaaaacaatt 236  Q
    |||||||||||| |||||||| ||||||  ||||||||| || ||| ||||||  |||  |||| | ||||||| ||||||||||| ||||||||||    
T  50952410 cagcttatgacatgttcataaactgttttaagcttatttccataagctctccaagatagtttattacaacaactatatagcttatatgaaaacaatt 50952314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 2719529 - 2719451
Alignment:
Q  157 cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||| ||||  ||||||||||||| ||||||||||  ||| ||||||||||||  |||||||||| || |||||||||    
T  2719529 cataagttgttctcagcttattttcataagttctccaagatagcttatgaaaacagtttatagcttaaac-aaaacaatt 2719451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 16990171 - 16990246
Alignment:
Q  158 ataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    ||||| ||||| |||||||||| |||||||||| ||  |||  ||| |||||||||||||| |||||| |||||||    
T  16990171 ataagttgttttcagcttatttgcacaagttcttcatgatagtttaagaaaacaacttatatcttatatgaaaaca 16990246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 254
Target Start/End: Complemental strand, 20170586 - 20170487
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||| ||| || ||||||||||  ||||||| |  ||| ||| | ||||||||||||||| ||||| ||||||||| ||  |||||| ||||||    
T  20170586 ttcataagcttttttcaacttattttcattagttctcaaaaataacttgtaaaaacaacttatagcatatacaaaaacaatttaacattattttatcttt 20170487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 254
Target Start/End: Complemental strand, 21335722 - 21335639
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||||| |||||||| | |||| |||||||||||| |||| ||  ||||| ||||||| | || ||||||| ||||||    
T  21335722 agcttattttcataagttctctagtatagcttatgaaaacagcttacagaatatacaaaaacaactaaactttattttatcttt 21335639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 233
Target Start/End: Complemental strand, 24785281 - 24785190
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    ||||||||||| ||||||||| |||||  ||||||||| || ||| |||| |  ||| ||||||||||||  |||||| |||||| ||||||    
T  24785281 agcttatgacatgttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaacacgttatagattatacaaaaaca 24785190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 41057061 - 41057022
Alignment:
Q  195 tatatcttatgaaaacaacttatagcttatacgaaaacaa 234  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  41057061 tatagcttatgaaaacaacttatagcttatatgaaaacaa 41057022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 5391956 - 5391910
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagt 187  Q
    |||||||||||| ||||||||||||||| || |||||||||| ||||    
T  5391956 cagcttatgacatgttcataagctgttttcaacttattttcataagt 5391910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 10101528 - 10101582
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||||||||| || |||||| |||||||||| || ||||||| ||||||    
T  10101528 cttatgaaaacaacttttatcttatatgaaaacaatttaactttattttatcttt 10101582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 10212453 - 10212507
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||||||||| || |||||| |||||||||| || ||||||| ||||||    
T  10212453 cttatgaaaacaacttttatcttatatgaaaacaatttaactttattttatcttt 10212507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 20467183 - 20467261
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagctta 223  Q
    |||||||| ||||||| ||||||| | ||| ||||| ||||| || | |  |||||||||||||||| |||||||||||    
T  20467183 ttatgacatgttcatatgctgttttcggctaattttgacaagctcgctaggatatcttatgaaaacagcttatagctta 20467261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 25776180 - 25776114
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagct 221  Q
    |||||||||||||| ||||||| || || ||||||| ||  | | ||||||||||||||||||||||    
T  25776180 ttcataagctgttttcagcttacttccataagttcttcaagacaacttatgaaaacaacttatagct 25776114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 35696298 - 35696244
Alignment:
Q  158 ataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaa 212  Q
    ||||||| ||| || ||||||||||||||||||||| |||| ||||| |||||||    
T  35696298 ataagcttttttcaacttattttcacaagttctccaatatagcttataaaaacaa 35696244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 36101645 - 36101556
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactata-tcttatgaaaacaacttatagcttatacgaaa 230  Q
    |||||||||||| ||||| ||||||||| ||||||||||||| ||| ||| ||  ||| | | ||| ||||||||||||| ||||||||||    
T  36101645 cagcttatgacatgttcacaagctgttttcagcttattttcataagctcttcaggatagtataatg-aaacaacttatagattatacgaaa 36101556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 39723233 - 39723279
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagt 187  Q
    |||||||||||| ||||||||||||||| ||||||||| ||| ||||    
T  39723233 cagcttatgacatgttcataagctgttttcagcttattctcataagt 39723279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 42733960 - 42734022
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    ||||||||| || ||| ||||||| ||| ||  ||||||||||||||||||||||| ||||||    
T  42733960 agcttatttccataagctctccacgatagctggtgaaaacaacttatagcttatacaaaaaca 42734022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 45264372 - 45264454
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||||||||| || ||||||||||| | || ||||  | | |||||||||| | |||||||||| || ||||||||||    
T  45264372 gttcataagctgttttcaccttattttcaccaattttccaagagagcttatgaaaatagcttatagcttgtaagaaaacaatt 45264454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 46886718 - 46886780
Alignment:
Q  174 ttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||| ||||||||||  ||| |||||||||||| ||||||||| |||| |||| ||||    
T  46886718 ttattttcaaaagttctccaagatagcttatgaaaacagcttatagctcatacaaaaataatt 46886780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 51510216 - 51510270
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttata 225  Q
    ||||||||| || ||| ||||||| ||| |||||||||||||||||||| |||||    
T  51510216 agcttatttccataagctctccacgataacttatgaaaacaacttatagtttata 51510270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 54837027 - 54837121
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaat 235  Q
    |||||||||||| ||||||||  ||||| | ||||||||| | ||| | ||||  ||| |||||||||| |||||| || |||||| ||||||||    
T  54837027 cagcttatgacatgttcataacttgttttccgcttatttttataagctgtccaagatagcttatgaaaataacttacagtttatacaaaaacaat 54837121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 3044255 - 3044304
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctcca 193  Q
    ||||||||| ||||||||||||||| || |||||||||| ||| ||||||    
T  3044255 cttatgacatgttcataagctgttttcaacttattttcataagctctcca 3044304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 21574564 - 21574456
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttt 243  Q
    ||||||||| |||||||||||| ||  ||||||||| || ||| ||||||   || ||||| |||| || |||||||||||| | |||||||| || |||    
T  21574564 cttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttat-aaaaaaagttatagcttatatgtaaacaatttaacttt 21574466  T
Q  244 atttaatctt 253  Q
    |||| |||||    
T  21574465 attttatctt 21574456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 24684848 - 24684929
Alignment:
Q  173 cttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||| |||| |||||  |||  ||||| ||| ||||||||||| ||||| ||||||||| || ||||||| ||||||    
T  24684848 cttattttctcaagatctccgatattgcttataaaagcaacttatagcatatacaaaaacaattaaaatttattttatcttt 24684929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 25925816 - 25925767
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctcca 193  Q
    ||||||||| ||||||||||||||| || |||||||||| ||| ||||||    
T  25925816 cttatgacatgttcataagctgttttcaacttattttcataagctctcca 25925767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 30573911 - 30574020
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttta 244  Q
    ||||| || ||||||||||||||| |||||||| ||||  || ||||||  ||| |||||||||||| | ||||| |||||  |||| || | || ||||    
T  30573911 ttatggcatgttcataagctgttttcagcttatgttcatcagctctccaagatagcttatgaaaacatcatatagattataaaaaaaaaacttaacttta 30574010  T
Q  245 tttaatcttt 254  Q
    ||| ||||||    
T  30574011 ttttatcttt 30574020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 35450605 - 35450572
Alignment:
Q  203 atgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||||||||||||||||| ||||||||||    
T  35450605 atgaaaacaacttatagcttataagaaaacaatt 35450572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 8e-23; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 680580 - 680485
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||| ||| |||| |||||| ||||||||||||||||||||| ||  ||| |||||||||| | ||||||||||||||||||||||||    
T  680580 cagcttatgacatgtttataaactgttttcagcttattttcacaagttcttcaagatagcttatgaaaatagcttatagcttatacgaaaacaatt 680485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 142 - 247
Target Start/End: Complemental strand, 1625977 - 1625871
Alignment:
Q  142 agcttatgacag-gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaag 240  Q
    |||||||||||  ||||||||| ||||| ||||| ||||||  ||||||||||  ||| ||||||||||||||||||| ||||||||||||||||| ||     
T  1625977 agcttatgacaatgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaacaacttataacttatacgaaaacaatttaac 1625878  T
Q  241 tttattt 247  Q
    |||||||    
T  1625877 tttattt 1625871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 11513958 - 11513862
Alignment:
Q  158 ataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||| ||| |||||||||| || ||||||||||  ||| |||||||||||||||||||||||||| ||||||||||  | ||||||| ||||||    
T  11513958 ataagctattttcagcttatttccaaaagttctccatgatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttt 11513862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 155 - 254
Target Start/End: Original strand, 12464480 - 12464579
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||| ||||| ||| ||||||||||||||||||||||||  ||| |||||||||| | |||||||| ||||| ||||||||| || ||||||| ||||||    
T  12464480 ttcacaagcttttttcagcttattttcacaagttctccaagatagcttatgaaaatagcttatagcatatacaaaaacaatttaactttattttatcttt 12464579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 141 - 233
Target Start/End: Complemental strand, 40158795 - 40158703
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    |||||||||||| ||| ||||| ||||| ||||||| || || ||| ||||||  ||| |||||||||||||||||| |||||||||||||||    
T  40158795 cagcttatgacatgtttataagttgttttcagcttaattacataagctctccagaataacttatgaaaacaacttattgcttatacgaaaaca 40158703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 43910995 - 43911087
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||| ||||||||| ||||| ||||||||| ||||||| | ||||  ||| ||| |||||||||||||| ||||||||| ||||||||    
T  43910995 cttatgacatgttcataagttgttttcagcttattatcacaagctttccaagatagcttttgaaaacaacttatggcttatacggaaacaatt 43911087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 18066190 - 18066099
Alignment:
Q  156 tcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 247  Q
    ||||||||| ||| || |||||||||  ||||||||||  ||| |||||||||||| ||||||||||||| |||||||||| || |||||||    
T  18066190 tcataagctattttcaccttattttcttaagttctccaagatagcttatgaaaacagcttatagcttatatgaaaacaatttaactttattt 18066099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 26626950 - 26626855
Alignment:
Q  142 agcttatgacag-gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||  |||||||| |||||| ||| ||||||||| ||||||| ||  ||| |||||||||||| ||| ||||||||||||||||||||    
T  26626950 agcttatgacattgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaacagcttctagcttatacgaaaacaatt 26626855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 40279261 - 40279179
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||| || ||| ||||| ||||||| ||||||||||  ||| ||||||||||||||||||| ||||||| |||||||||    
T  40279261 gttcataaactattttcagctaattttcataagttctccaacatagcttatgaaaacaacttatatcttataccaaaacaatt 40279179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 42621386 - 42621452
Alignment:
Q  159 taagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttata 225  Q
    |||| ||||| ||||||||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  42621386 taagttgttttcagcttattttcacaagttctccagaataacttatgaaaacagcttatagcttata 42621452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 43279536 - 43279615
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||| ||| || ||||||||||||||||||||| |||| ||||| |||||||||||||||  |||| |||||||||    
T  43279536 ttcataagcttttttcaacttattttcacaagttctccaatatagcttataaaaacaacttatagc--atacaaaaacaatt 43279615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 24347796 - 24347698
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatga----aaacaacttatagcttatacgaaaacaattga 238  Q
    ||||||| ||||||||||||  | | ||||||||||||| |||||||||| ||||||||||||    |||||||||||||||||| | |||| ||||||    
T  24347796 cttatgataggttcataagccatattcagcttattttcataagttctccaatatatcttatgaaagcaaacaacttatagcttatgctaaaaaaattga 24347698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 26202091 - 26202026
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagc 220  Q
    |||||||||| ||| || |||||||||| |||||||||| |||||||||| |||||||||||||||    
T  26202091 ttcataagcttttttcaacttattttcataagttctccaatatatcttataaaaacaacttatagc 26202026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 44438832 - 44438945
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaag 240  Q
    |||||||||||| |||||||| |||||| |||||||||| |||||| ||||||  ||| |||||||| ||| ||||| |||| ||| |||||| ||  |     
T  44438832 cagcttatgacatgttcataacctgttttcagcttatttccacaagatctccaggataacttatgaagacagcttatggcttgtacaaaaacagtttgac 44438931  T
Q  241 tttatttaatcttt 254  Q
    ||||||| ||||||    
T  44438932 tttattttatcttt 44438945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 141 - 253
Target Start/End: Original strand, 29316768 - 29316880
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaag 240  Q
    |||||||||||| ||||||||| | ||| |||||||||| || ||||||||||  ||| || ||||||||| ||||||| ||||  |||||||||| ||     
T  29316768 cagcttatgacatgttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttatagattatgtgaaaacaatttaac 29316867  T
Q  241 tttatttaatctt 253  Q
     |||||| |||||    
T  29316868 cttattttatctt 29316880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 33931566 - 33931657
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaat 235  Q
    ||||||||| ||||||||| |  || |||||||||| ||| | |||||||  ||| |||||||||||| |||||||||||||| ||||||||    
T  33931566 cttatgacatgttcataagtttatttcagcttatttccactatttctccaaaatagcttatgaaaacagcttatagcttatacaaaaacaat 33931657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 40279331 - 40279268
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttat 217  Q
    |||||||| |||||| ||||| ||||||| |||||||||| |||| ||||||||||||||||||    
T  40279331 gttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttat 40279268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 40279401 - 40279338
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttat 217  Q
    |||||||| |||||| ||||| ||||||| |||||||||| |||| ||||||||||||||||||    
T  40279401 gttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttat 40279338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 1893277 - 1893363
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaa 230  Q
    ||||||||| || |||||| | ||| ||||||||||||||||||||||||  ||| |||  ||||||| |||||||||| |||||||    
T  1893277 cttatgacatgtacataagttattttcagcttattttcacaagttctccaagatagcttccgaaaacagcttatagcttttacgaaa 1893363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 22681191 - 22681273
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||||||  ||||||||| || |||||||| |  |||  ||||||||||| ||||||||||||| ||||||||||    
T  22681191 gttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatt 22681273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 33942224 - 33942114
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttt 243  Q
    ||||||||| ||||||||||||||| ||||| |||||||  || |||| |  ||  |||||||||||||||||||||||| | ||||||| ||  | |||    
T  33942224 cttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaacaacttatagcttacatgaaaacagtttgacttt 33942125  T
Q  244 atttaatcttt 254  Q
    |||| ||||||    
T  33942124 attttatcttt 33942114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 41241141 - 41241238
Alignment:
Q  157 cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||| ||| ||||||| ||||||||||| ||||  ||| |||| |||||| ||||||||| ||||| ||||||||| || || |||| ||||||    
T  41241141 cataagcttttttcagcttaatttcacaagttttccaagataacttaggaaaactacttatagcatatacaaaaacaatttaacttcattttatcttt 41241238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 9395190 - 9395094
Alignment:
Q  158 ataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||||| ||||||||||||| ||| ||| ||  ||| || ||||||||| ||||||| ||||| |||||||||| |  ||||||| ||||||    
T  9395190 ataagctgttttcagcttattttcataagctctacagaataactaatgaaaacagcttatagattatatgaaaacaatttagctttattttatcttt 9395094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 33941983 - 33941891
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||| |||||||||||| || || |||||| ||| ||  ||||||  ||| ||||||||||||| ||||| ||||||| |||||||||    
T  33941983 cttatgacaagttcataagctgctttcaacttattatcataaactctccaagatagcttatgaaaacaagttataacttatacaaaaacaatt 33941891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 40279468 - 40279408
Alignment:
Q  157 cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttat 217  Q
    ||||| |||||| || |||||||||| |||||||||| |||| ||||||||||||||||||    
T  40279468 cataaactgttttcaacttattttcataagttctccaatatagcttatgaaaacaacttat 40279408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 254
Target Start/End: Complemental strand, 32592649 - 32592551
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||| ||  || |||||||||| |||||||||| |||  ||||| ||||||||||||||| ||||| ||||||||| ||  |||||| ||||||    
T  32592649 ttcataagcttttctcaacttattttcataagttctccaatattgcttataaaaacaacttatagcgtatac-aaaacaatttaacattattttatcttt 32592551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 41851598 - 41851507
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatt 246  Q
    |||||||||| ||  ||||||| ||||| || |||||||  ||| ||| ||||||||||||||||| ||||| ||||||||| || ||||||    
T  41851598 ttcataagcttttctcagcttaatttcataaattctccaagatagcttctgaaaacaacttatagcatatacaaaaacaatttaactttatt 41851507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 27663370 - 27663460
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaactt-atagcttatacgaaa 230  Q
    ||||| || ||| ||||||| ||||||| ||||||||| ||||||| ||||||  ||| ||| |||||||||||| |||| ||||||||||    
T  27663370 cagctaataacatgttcataggctgtttccagcttattatcacaagctctccaagatagcttttgaaaacaacttaatagtttatacgaaa 27663460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 12195015 - 12194930
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttata-cgaaaacaattgaa 239  Q
    |||||||||| ||| || ||||||||||||||||||||| |||| |||||  ||||||| |||| | |||| | ||||||||||||    
T  12195015 ttcataagcttttttcaacttattttcacaagttctccaatataacttatataaacaacctataacatataccaaaaacaattgaa 12194930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 29628749 - 29628830
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaat 235  Q
    ||||||||  ||||| |||||||||| || || || ||||  ||| ||||||| ||||||||||||||||||| ||||||||    
T  29628749 gttcataaattgttttcagcttatttccataaattttccaagatagcttatgagaacaacttatagcttatacaaaaacaat 29628830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 39073714 - 39073795
Alignment:
Q  173 cttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||||| ||||||||| |||| ||||| ||||  ||||||||| ||||| ||||||||| ||  |||||| ||||||    
T  39073714 cttattttcactagttctccaatatagcttataaaaattacttatagcatatacaaaaacaatttaacgttattttatcttt 39073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 39983402 - 39983329
Alignment:
Q  158 ataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    ||||||| ||| ||| |||||||||  || ||||||  ||| |||||||||||||||||||||||||| |||||    
T  39983402 ataagctattttcagtttattttcattagctctccaggatagcttatgaaaacaacttatagcttatatgaaaa 39983329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 42907438 - 42907330
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatg--aaaacaacttatagcttatacgaaaacaattga 238  Q
    |||||| | ||| |||||||||||| || |||| |||||||| ||| ||||||   || | ||||  |||||||||||||||||| |||||||||||| |    
T  42907438 cagcttctaacatgttcataagctgctttcagcctattttcataagctctccaagttagcatatgtgaaaacaacttatagcttaaacgaaaacaattta 42907339  T
Q  239 agtttattt 247  Q
    | |||||||    
T  42907338 actttattt 42907330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 43199431 - 43199378
Alignment:
Q  201 ttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||||||||||||||||||||||| | |||| || ||||||| ||||||    
T  43199431 ttatgaaaacaacttatagcttatacgaagataatttaactttattttatcttt 43199378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 9750961 - 9750917
Alignment:
Q  203 atgaaaacaacttatagcttatacgaaaacaattgaagtttattt 247  Q
    ||||||||||||||||||||||| |||||||||| || |||||||    
T  9750961 atgaaaacaacttatagcttataagaaaacaatttaactttattt 9750917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 16451182 - 16451118
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttata 218  Q
    |||||| |||||||| |||||||||||||| |||||||||  ||| |||| ||||||| ||||||    
T  16451182 gttcatgagctgttttcagcttattttcacgagttctccaagatagcttacgaaaacagcttata 16451118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 28039329 - 28039437
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttta 244  Q
    |||||||  ||||||||||||||| |||||||||| || || || ||||  | | ||||||||||   ||||||| ||||| ||||||||||| | ||||    
T  28039329 ttatgacttgttcataagctgttttcagcttatttccataacttttccaagaaagcttatgaaaattgcttatagtttatatgaaaacaattggacttta 28039428  T
Q  245 tttaatctt 253  Q
    ||| |||||    
T  28039429 ttttatctt 28039437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 44590088 - 44590028
Alignment:
Q  164 tgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttat 224  Q
    ||||| ||||||||| ||||||||||| ||  ||| ||||||||||||||||||| |||||    
T  44590088 tgttttcagcttattctcacaagttcttcaagatagcttatgaaaacaacttataacttat 44590028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 656802 - 656865
Alignment:
Q  173 cttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||| ||| ||| ||  ||| ||||||||| ||||||| |||||||||||||||||||    
T  656802 cttattttcataagctctgcaagatagcttatgaaatcaacttacagcttatacgaaaacaatt 656865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 750734 - 750656
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    |||||||||||||||  ||||||||| || ||||||||||  ||| |||||| ||||| || |||||||||||| |||||    
T  750734 gttcataagctgttttgagcttatttgcataagttctccaagatagcttatg-aaacagctcatagcttatacgtaaaca 750656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 1939328 - 1939395
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaaca 211  Q
    ||||||||| || |||||||||||| || ||||||| || ||| |||||| |||| ||||||||||||    
T  1939328 cttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaaca 1939395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 5759597 - 5759660
Alignment:
Q  170 cagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    ||||||||||||||||   |||||  ||| |||||||||||| |||||||| ||||||||||||    
T  5759597 cagcttattttcacaaaccctccagaatagcttatgaaaacagcttatagcatatacgaaaaca 5759660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 8017511 - 8017416
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||| | ||||||||  ||||| | || |||||||| ||||||||||  ||| ||||||||||||  ||| |||||||| ||||| ||||    
T  8017511 cagcttatgatatgttcataatttgttttctgcgtattttcataagttctccaagatagcttatgaaaacagtttacagcttatatgaaaataatt 8017416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 10563551 - 10563646
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||| ||||||| || |||||||| ||| ||||||||||||  ||| ||| ||  ||| ||||||||||||||||||| |||| |  |||||||||    
T  10563551 cagcctatgacatgtccataagctattttcagcttattttcttaagctcttcagcatagcttatgaaaacaacttataacttacaaaaaaacaatt 10563646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 12289860 - 12289797
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttata 218  Q
    |||||||||| ||| || |||||||||| |||||||||| ||||  |||| |||||||||||||    
T  12289860 ttcataagcttttttcaacttattttcataagttctccaatataaattataaaaacaacttata 12289797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 18179236 - 18179323
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    |||| |||| || ||| |||| ||| ||||||||||||  ||||||||||  ||| ||||||||| || ||||||||||||| |||||    
T  18179236 cttaagacatgtccattagctattttcagcttattttcgtaagttctccaggatagcttatgaaagcagcttatagcttatatgaaaa 18179323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 2142718 - 2142640
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctcc-actatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    |||||| ||||||||  |||||||||||| || |||||| |  |||  |||||||||||||||||||||||||| ||||    
T  2142718 gttcattagctgtttttagcttattttcataaattctcccaagataaattatgaaaacaacttatagcttatacaaaaa 2142640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 2360388 - 2360442
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||||||||| | | |||| |||||||||||||| ||||||| ||||||    
T  2360388 cttatgaaaacaacttgttgtttatgcgaaaacaattgaactttattttatcttt 2360442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 10285934 - 10285848
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaa 230  Q
    ||||||||| || |||||||||||| || ||||||| || |||||||| |   || |||||| |||| |||||||||||||| ||||    
T  10285934 cttatgacatgtccataagctgttttcaacttatttccataagttctctatgttagcttatgcaaacgacttatagcttatatgaaa 10285848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 16398173 - 16398123
Alignment:
Q  159 taagctgtttacagcttattttcacaagttctccactatatcttatgaaaa 209  Q
    |||||||||| ||||||||||||| ||||||||||  ||| ||||||||||    
T  16398173 taagctgttttcagcttattttcataagttctccaacataacttatgaaaa 16398123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 27695619 - 27695681
Alignment:
Q  172 gcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaa 234  Q
    |||||||||||||||||| ||| |||| ||||| |||||| |||||| | ||||| |||||||    
T  27695619 gcttattttcacaagttccccaatatagcttataaaaacagcttatatcatatacaaaaacaa 27695681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 234
Target Start/End: Original strand, 30990422 - 30990460
Alignment:
Q  196 atatcttatgaaaacaacttatagcttatacgaaaacaa 234  Q
    |||||||||||||||| |||||||||||||| |||||||    
T  30990422 atatcttatgaaaacagcttatagcttatacaaaaacaa 30990460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 35379009 - 35379079
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaaca 211  Q
    ||||| |||||  ||||||||| ||||| ||||||||||||| ||| ||||||  ||| ||||||||||||    
T  35379009 cagctgatgacttgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 36043968 - 36043886
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||||||  |||| | ||||| ||| ||||||  ||| || ||||| |||  |||||||||||||||||||||||    
T  36043968 gttcataagctgtttttagctcaatttcataagctctccaagataactaatgaagacagtttatagcttatacgaaaacaatt 36043886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 192
Target Start/End: Complemental strand, 43511149 - 43511111
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctcc 192  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  43511149 gttcataagctgttttcagcttattttcataagttctcc 43511111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 43984996 - 43985086
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    |||||||| | | |||||| | || ||| ||||||||||||| ||| ||| ||  ||| |||||||||||||||||||  |||||||||||    
T  43984996 cagcttataatatgttcattatctattttcagcttattttcataagctcttcaagatagcttatgaaaacaacttataatttatacgaaaa 43985086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 6167306 - 6167371
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||| || ||||||||||  ||| ||||| |||||| ||||||||||| |||||| |||||    
T  6167306 agcttatttccataagttctccaaaatagcttataaaaacagcttatagcttaaacgaaagcaatt 6167371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 16353905 - 16353848
Alignment:
Q  174 ttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    ||||||||||||| ||||||  ||| ||||| |||||| ||||||||||||| |||||    
T  16353905 ttattttcacaagatctccaagatagcttataaaaacagcttatagcttatatgaaaa 16353848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 35485991 - 35485910
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttata 225  Q
    ||||||| | ||||||||||||||| ||||| |||| || | | ||| ||  ||| ||||| ||||||||||||||||||||    
T  35485991 cttatgatatgttcataagctgttttcagctcatttccataggctcttcaggatagcttataaaaacaacttatagcttata 35485910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 415376 - 415286
Alignment:
Q  146 tatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||| |||||||| |||||| ||||||  || || ||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  415376 tatgacatgttcataatctgttttcagctttattccataagttctccactatagcttataaaaacaacttatagcttatacgaaaacaatt 415286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 9093549 - 9093662
Alignment:
Q  142 agcttatgacag-gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaag 240  Q
    |||||||||||  ||| |||| |||||| ||||||||||||  |||||||| |  | | |||||||||||| |||||||||||||||||||||||| ||     
T  9093549 agcttatgacattgttaataacctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaaaacaatttaac 9093648  T
Q  241 tttatttaatcttt 254  Q
    ||||||| ||||||    
T  9093649 tttattttatcttt 9093662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 31624167 - 31624085
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagctta 223  Q
    |||||||||||| ||||||||||||||| || |||||||||| || |||||||  ||| | |||||||||| |||||||||||    
T  31624167 cagcttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagctta 31624085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 20368176 - 20368268
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||| |||||||||||  || || |||||||||| ||||||||||  | | ||||||||||||||||||| || |||| |||||||||    
T  20368176 cttatgacatgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaacaacttataactcatacaaaaacaatt 20368268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 6536678 - 6536597
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||| ||| || |||||||||| || ||||||| |||| ||| | ||||||||||||||| ||||| |||||||||    
T  6536678 ttcataagcttttttcaacttattttcataaattctccaatatagcttctaaaaacaacttatagcatatacaaaaacaatt 6536597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 6909894 - 6909971
Alignment:
Q  170 cagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 247  Q
    ||||||| ||||| || |||||||  |||| |||||||||||||||||||| ||||| ||||||||| || |||||||    
T  6909894 cagcttaatttcataaattctccaagatatgttatgaaaacaacttatagcatatacaaaaacaatttaactttattt 6909971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 34430469 - 34430549
Alignment:
Q  156 tcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||| ||| ||||||||||||| || |||||||  ||| |||||||||||| |||||| | ||||| |||||||||    
T  34430469 tcataagcttttttcagcttattttcataacttctccaagatagcttatgaaaacaccttataacatatacaaaaacaatt 34430549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 103508 - 103433
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaactta 216  Q
    ||||||||||||  ||||||| ||||||||||||| ||||||  || ||||||  ||| |||||||||||||||||    
T  103508 cagcttatgacatattcataaactgtttacagcttgttttcattagatctccaggatagcttatgaaaacaactta 103433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 254
Target Start/End: Complemental strand, 2735132 - 2735033
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||||||| | ||||||||||| ||||| | ||  ||  |||||||||||| ||||||| |||||| |||| |||| || ||||||| ||||||    
T  2735132 ttcataagctgttttcggcttattttcataagttgttcaagattgcttatgaaaacagcttatagattatacaaaaataatttaactttattttatcttt 2735033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 837238 - 837304
Alignment:
Q  170 cagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||||||| ||||||||||  ||| || |||||||| |||||||||||| || |||||||||    
T  837238 cagcttattttcataagttctccaagatagctaatgaaaactacttatagcttacaccaaaacaatt 837304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 248
Target Start/End: Original strand, 8364975 - 8365076
Alignment:
Q  147 atgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatt 246  Q
    |||||| ||| | ||||||||| |||||||||||||  ||||| |||  ||| ||||||||||||  ||||| ||||||  |||||||||||| || |||    
T  8364975 atgacatgtttacaagctgttttcagcttattttcatcagttcaccatgatagcttatgaaaacagtttataacttatataaaaacaattgaacttaatt 8365074  T
Q  247 ta 248  Q
    ||    
T  8365075 ta 8365076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 31812036 - 31812109
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttta 244  Q
    |||||||||||| ||| ||||||  ||| ||||||||||||||||||| ||||||| | ||||| |||| ||||    
T  31812036 agcttattttcataagctctccaagatagcttatgaaaacaacttatatcttatacaataacaaatgaatttta 31812109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 32386579 - 32386651
Alignment:
Q  164 tgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||| ||||||||||||| ||| ||||||  ||| || ||||||||||| |||| |||||| ||||||||||    
T  32386579 tgttttcagcttattttcataagctctccaggataactaatgaaaacaacgtataccttatatgaaaacaatt 32386651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 4420716 - 4420645
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaactta 216  Q
    |||||||| ||||||||||||||| |||||||||| || ||| ||||||  ||| |||| ||||| ||||||    
T  4420716 ttatgacatgttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaaataactta 4420645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 7485120 - 7485167
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 247  Q
    |||||||||||||||||||||||||| ||||| |||| || |||||||    
T  7485120 cttatgaaaacaacttatagcttatatgaaaaaaatttaactttattt 7485167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 11784069 - 11784132
Alignment:
Q  187 ttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaat 250  Q
    ||||||| |||| |||||||||||| |||||||| ||||| ||||||||| || || |||||||    
T  11784069 ttctccaatatagcttatgaaaacagcttatagcatatacaaaaacaatttaatttaatttaat 11784132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 29274272 - 29274335
Alignment:
Q  191 ccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||| ||||||||||||||||  |||||||||||| ||||||||||  | ||||||| ||||||    
T  29274272 ccacaatatcttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatcttt 29274335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 696679 - 696633
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagt 187  Q
    |||||||||||| ||||||||||||||| ||||||||| ||| ||||    
T  696679 cagcttatgacatgttcataagctgttttcagcttattctcataagt 696633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 4246481 - 4246395
Alignment:
Q  147 atgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    |||||| || |||||||||||| || |||||||| | | | ||||||  ||| |||||||||||| ||||||| ||||| |||||||    
T  4246481 atgacatgtccataagctgttttcaacttatttttatatgctctccataatagcttatgaaaacagcttatagattatatgaaaaca 4246395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 9912183 - 9912241
Alignment:
Q  141 cagcttatgacag-gttcataagctgtttacagcttattttcacaagttctccactata 198  Q
    ||||||||||||  |||||||||||||||  |||||||||||| |||||||||| ||||    
T  9912183 cagcttatgacattgttcataagctgttttgagcttattttcataagttctccaatata 9912241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 33828664 - 33828610
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||| ||||||||||||| |||||||||||||||||  | ||||||||| ||||    
T  33828664 cttattaaaacaacttataacttatacgaaaacaatttgactttatttaaccttt 33828610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 821872 - 821835
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttca 182  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  821872 ttatgacatgttcataagctgttttcagcttattttca 821835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 6647463 - 6647394
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaaca 211  Q
    ||||||||||| ||||||||| ||||| || |||||||||| ||| |||| |  ||| ||||||||||||    
T  6647463 agcttatgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaaca 6647394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 20671918 - 20671971
Alignment:
Q  201 ttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||||| ||| |||||||||||||||||||  | ||||||| ||||||    
T  20671918 ttatgaaaacaatttaaagcttatacgaaaacaatttgactttattttatcttt 20671971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 31624953 - 31625002
Alignment:
Q  160 aagctgtttacagcttattttcacaagttctccactatatcttatgaaaa 209  Q
    ||||||||| ||||||||||||| |||||||||| |||| |||| |||||    
T  31624953 aagctgttttcagcttattttcataagttctccaatatagcttacgaaaa 31625002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 5e-21; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 7218070 - 7218162
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||| ||||| ||||||||| || |||||||||| ||||||||||  |||  ||||||||||||||||||||||||| ||||||||||    
T  7218070 cttatgacacgttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttatagcttatatgaaaacaatt 7218162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 37842354 - 37842461
Alignment:
Q  147 atgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatt 246  Q
    |||||| |||||||||| |||| ||||||||||| | ||||||| ||  ||| ||||||||||||||||||||||||| |||| ||| || || ||||||    
T  37842354 atgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagcttattcgaacacagtttaactttatt 37842453  T
Q  247 taatcttt 254  Q
    | ||||||    
T  37842454 tcatcttt 37842461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 253
Target Start/End: Original strand, 24915058 - 24915156
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 253  Q
    |||||||||| ||| || |||||||||||||||||||||  | | |||||||||||| |||||||| ||||| ||||||||| || ||||||| |||||    
T  24915058 ttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttatagcatatacaaaaacaatttaactttattttatctt 24915156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 49888813 - 49888731
Alignment:
Q  172 gcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||||| |||||||| |  ||| ||||||||||||||| ||||||||||||||||||||| || ||||||| ||||||    
T  49888813 gcttattttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaacaattaaactttattttatcttt 49888731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 17603391 - 17603472
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||| || |||||| |||||||||| |||||||||| |||| ||||| ||||||||||||||| ||||| |||||||||    
T  17603391 ttcataaactttttacaacttattttcagaagttctccaatatagcttataaaaacaacttatagcatatacaaaaacaatt 17603472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 155 - 247
Target Start/End: Complemental strand, 473227 - 473135
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 247  Q
    |||||||||| ||| || |||||||||| |||||||||| || | ||||| ||||||||||||||| || |||||||||||| || |||||||    
T  473227 ttcataagcttttttcaacttattttcataagttctccaatagaacttataaaaacaacttatagcatacacgaaaacaatttaactttattt 473135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 34290312 - 34290228
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatac 226  Q
    |||||||||||  |||||||| ||||| ||||||||||||| ||||||| ||  ||| |||||||||||| ||||||||||||||    
T  34290312 agcttatgacatattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagcttatac 34290228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 30371219 - 30371112
Alignment:
Q  147 atgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatt 246  Q
    |||||| || |||||| ||||| ||||||||||  | | | ||||||  || ||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  30371219 atgacatgtccataagttgttttcagcttatttcaatacgctctccaaaatgtcttatgaaaacaacttatagcttatatgaaaacaatttgagtttatt 30371120  T
Q  247 taatcttt 254  Q
    | ||||||    
T  30371119 ttatcttt 30371112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 31517739 - 31517846
Alignment:
Q  147 atgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatt 246  Q
    |||||| ||||||||||||||| ||||||||||||| ||| ||||||  | |  ||||||| ||| ||||||||||||| |||| ||||| || ||||||    
T  31517739 atgacatgttcataagctgttttcagcttattttcataagctctccaagacagattatgaagacagcttatagcttatatgaaatcaatttaactttatt 31517838  T
Q  247 taatcttt 254  Q
    | ||||||    
T  31517839 ttatcttt 31517846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 35179200 - 35179126
Alignment:
Q  157 cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    |||||||||||| ||||||||||||| ||||||||||  ||| |||||||||||| |||||| |||| |||||||    
T  35179200 cataagctgttttcagcttattttcataagttctccataataacttatgaaaacagcttataacttaaacgaaaa 35179126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 51695501 - 51695583
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||||| ||| ||||||||||||| || |||||||  ||| |||||||||||| || ||| |||||||||||||||||    
T  51695501 gttcataagctattttcagcttattttcataaattctccaagatagcttatgaaaacatctgataacttatacgaaaacaatt 51695583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 42174918 - 42174841
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaac 232  Q
    ||||||||||||||  | |||||||||| |||||||||| |||| ||||| ||||||||||||||| ||||| |||||    
T  42174918 ttcataagctgtttttaacttattttcataagttctccaatataacttataaaaacaacttatagcatatacaaaaac 42174841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 7136993 - 7137081
Alignment:
Q  143 gcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    ||||||||||  |||||||| | ||| ||||||||||||| ||||||||||  ||| |||||||||||| ||||||| |||||| ||||    
T  7136993 gcttatgacatattcataagttattttcagcttattttcataagttctccaagatagcttatgaaaacagcttatagattatacaaaaa 7137081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 45975753 - 45975677
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    |||||||||||||| ||||||||||||| || |||||||  ||| |||||||||||| ||| |||||||||| ||||    
T  45975753 ttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaacagcttgtagcttatacaaaaa 45975677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 3234040 - 3234103
Alignment:
Q  173 cttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||| |||||||||| |||| ||||| ||||||||||||||| ||||| |||||||||    
T  3234040 cttattttcataagttctccaatatagcttataaaaacaacttatagcatatacaaaaacaatt 3234103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 4622167 - 4622080
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    ||||||||| || ||||||||||||  |||||||||||||||| ||||||  ||| | |||| ||||| ||||||||||||| |||||    
T  4622167 cttatgacatgtccataagctgtttttagcttattttcacaagctctccaagatagcatatggaaacagcttatagcttatatgaaaa 4622080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 10809419 - 10809340
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagctta 223  Q
    ||||||||| ||| ||||  ||||| ||||||||||||| |||||||||| |||| || |||| ||||||||||||||||    
T  10809419 cttatgacatgtttataatatgttttcagcttattttcataagttctccaatatagctgatgagaacaacttatagctta 10809340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 25479654 - 25479563
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||| |||||| || ||||| ||||||||||||| ||| |||| |  ||| ||||||||||||||||||||| |||| ||| ||||||    
T  25479654 ttatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatatgaagacaatt 25479563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 34952273 - 34952186
Alignment:
Q  160 aagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 247  Q
    |||| |||| ||||||||||||| ||||||||    ||| ||||||||||||||||| ||||||| ||||||||||| || |||||||    
T  34952273 aagcagttttcagcttattttcataagttctctttgatagcttatgaaaacaacttacagcttattcgaaaacaatttaactttattt 34952186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 233
Target Start/End: Complemental strand, 44422775 - 44422684
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    ||||||||||| || |||||||||  ||||||||||||||| ||| ||||||  ||| ||||| |||| | ||||||||||||| |||||||    
T  44422775 agcttatgacatgtccataagctgactacagcttattttcataagctctccaggatagcttataaaaatagcttatagcttatatgaaaaca 44422684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 10799535 - 10799457
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagctta 223  Q
    |||||||| ||| |||| |||||| ||||||||||||| |||||||||| | || || |||| ||||||||||||||||    
T  10799535 ttatgacatgtttataatctgttttcagcttattttcataagttctccaatgtagctgatgagaacaacttatagctta 10799457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 28689445 - 28689538
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttat--gaaaacaacttatagcttatacgaaaac 232  Q
    |||||||||||| || |||||| ||||| ||||||||||||| ||| | ||||  ||| |||||  ||||||||||||||||||||| ||||||    
T  28689445 cagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaaac 28689538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 1510317 - 1510410
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttattta 248  Q
    |||||||||| ||| || |||||||||  |||||||||| || | ||||| ||||||||||||| | ||||| ||||||||||||  |||||||    
T  1510317 ttcataagcttttttcaacttattttcgtaagttctccaatagagcttataaaaacaacttataacctatacaaaaacaattgaacattattta 1510410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 2777955 - 2777874
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||| |||| ||||||||||||| ||||||||||   || ||||| |||||| |||||||||||||| || ||||||    
T  2777955 ttcataagccgttttcagcttattttcataagttctccaagttaacttattaaaacagcttatagcttatacaaagacaatt 2777874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 4576878 - 4576769
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttta 244  Q
    |||||||| ||| ||||| ||| | ||||||||||||| ||||| | || |||| |||||||||||| |||||| ||| ||| |||| | || || ||||    
T  4576878 ttatgacatgtttataagttgtgttcagcttattttcataagttattcaatatagcttatgaaaacagcttataacttgtacaaaaatattttaacttta 4576779  T
Q  245 tttaatcttt 254  Q
    ||||||||||    
T  4576778 tttaatcttt 4576769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 10199402 - 10199491
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    ||||||||||| ||||||||| ||||| ||||||||||||| ||| |||| |  ||| |||||||||| | ||||| | |||||||||||    
T  10199402 agcttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaaaagcttatcgattatacgaaaa 10199491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 6292570 - 6292518
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctcca 193  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||| ||||||    
T  6292570 cagcttatgacatgttcataagctgttttcagcttattttcataagctctcca 6292518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 171 - 254
Target Start/End: Complemental strand, 1432562 - 1432479
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||| ||||| ||||||||||  |||  |||||||||||| ||||||||||||  |||||||||||| | ||||| ||||||    
T  1432562 agcttactttcataagttctccaagatagtttatgaaaacaatttatagcttataaaaaaacaattgaactctattttatcttt 1432479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 7472384 - 7472293
Alignment:
Q  146 tatgacaggttcataag-ctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||| ||||||||  |||||| ||||||||||||| ||| ||||||  ||| |||||| ||||| ||||||| |||||| |||||||||    
T  7472384 tatgacatgttcataaaactgttttcagcttattttcataagctctccaagatagcttatggaaacagcttatagattatacaaaaacaatt 7472293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 171 - 254
Target Start/End: Complemental strand, 13810045 - 13809962
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||||||||||||||| | ||||  |||| |||||||  |||||| ||||| ||||||||| || ||||||| ||||||    
T  13810045 agcttattttcacaagttctctaatatagtttataaaaacaatatatagcatatacaaaaacaatttaactttattttatcttt 13809962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 27820343 - 27820425
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||||| ||| ||||||||||||| || |||||||  ||| ||||| |||||| | ||||||||||||  ||||||||    
T  27820343 gttcataagctattttcagcttattttcataaattctccaagatagcttataaaaacagcatatagcttatacataaacaatt 27820425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 36070268 - 36070214
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||||||||||||||||||| |||| |||||| || ||||||| ||||||    
T  36070268 cttatgaaaacaacttatagcttatccgaagacaatttaactttattttatcttt 36070214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 5592694 - 5592791
Alignment:
Q  157 cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||| ||||| ||||||||||||| ||| |||  |   || |||||||||||||||||||||||||| || |||||||  | ||||||| ||||||    
T  5592694 cataagttgtttccagcttattttcataagctcttaagactagcttatgaaaacaacttatagcttatatgacaacaattcgactttattttatcttt 5592791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 7244685 - 7244746
Alignment:
Q  175 tattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||| | ||||||||  ||  |||||||||||||| ||||||||||||||||||||||    
T  7244685 tattttcatacgttctccaagatcgcttatgaaaacaacgtatagcttatacgaaaacaatt 7244746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 7262511 - 7262588
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttata 218  Q
    |||||| ||||| ||||||||||||||| || ||||||| |||||| ||| ||  ||| |||||||||| ||||||||    
T  7262511 cagcttttgacatgttcataagctgttttcaccttatttccacaagctcttcaggatagcttatgaaaagaacttata 7262588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 15515559 - 15515526
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaaca 233  Q
    ||||||||||||||||||||||||||||||||||    
T  15515559 cttatgaaaacaacttatagcttatacgaaaaca 15515526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 30257756 - 30257647
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttta 244  Q
    |||||||| ||||||||||||||| ||||||||||  | |||  |||||  |||  |||||||||||||||| |||||||| | ||||| ||  | ||||    
T  30257756 ttatgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaacagtttgacttta 30257657  T
Q  245 tttaatcttt 254  Q
    ||| ||||||    
T  30257656 ttttatcttt 30257647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 37241844 - 37241905
Alignment:
Q  170 cagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    ||||||||||||| ||| |||| |  |||||||||||||||||||| ||||||||| |||||    
T  37241844 cagcttattttcataagctctctaggatatcttatgaaaacaacttctagcttatatgaaaa 37241905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 2294972 - 2294884
Alignment:
Q  157 cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttat 245  Q
    |||||||||||| || |||||||||  ||||||||||  |||  ||||||||| | |||||||||||| | ||||||||| || |||||    
T  2294972 cataagctgttttcaccttattttcgtaagttctccaagatagtttatgaaaatagcttatagcttatccaaaaacaatttaactttat 2294884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 4200289 - 4200213
Alignment:
Q  158 ataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaa 234  Q
    |||||||||||  |||||||||||| |||  |||||  |||||||| ||||||||  ||||||||||| ||||||||    
T  4200289 ataagctgttttaagcttattttcataagccctccaggatatcttacgaaaacaatatatagcttatatgaaaacaa 4200213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 247
Target Start/End: Complemental strand, 9656713 - 9656621
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 247  Q
    ||||||||||||||  |||||||||||| || |  ||||  ||| |||||||| ||| ||||||||||||| ||||| |||| || |||||||    
T  9656713 ttcataagctgttttgagcttattttcataattcatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattt 9656621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 11218001 - 11218033
Alignment:
Q  204 tgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||||||||||||||||||||||||    
T  11218001 tgaaaacaacttatagcttatacgaaaacaatt 11218033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 12564493 - 12564569
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttata 218  Q
    ||||||||||| ||  ||||| ||||| |||||||||| || ||||||||||  ||| |||||||||||||| ||||    
T  12564493 agcttatgacaagtcaataagttgttttcagcttatttccataagttctccaagatagcttatgaaaacaacctata 12564569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 23445408 - 23445316
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||| ||||||||||| ||| || | | |||| | | | ||||||  ||| |||||||||||||||||| |||||||| |||||||||    
T  23445408 cttatgacatgttcataagctattttcaacatgttttaagacgctctccaagatagcttatgaaaacaacttatggcttatacaaaaacaatt 23445316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 25006086 - 25006122
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||||||||||||||||| ||||||||||    
T  25006086 cttatgaaaacaacttatagcttatatgaaaacaatt 25006122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 37295771 - 37295815
Alignment:
Q  201 ttatgaaaacaacttatagcttatacgaaaacaattgaagtttat 245  Q
    ||||||||||||||||||||||| |||||||||||| || |||||    
T  37295771 ttatgaaaacaacttatagcttaaacgaaaacaatttaactttat 37295815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 37593680 - 37593744
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaa 208  Q
    ||||||||| ||||||||||||||| ||||||||||||| ||| ||| ||  ||| |||||||||    
T  37593680 cttatgacatgttcataagctgttttcagcttattttcataagctcttcaaaatagcttatgaaa 37593744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 1565528 - 1565623
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||| || |||||||||||| |||||||||||||  || ||||||  |||  ||| ||||||| |||| |  |||||| |||||||||    
T  1565528 cagcttatgacatgtgcataagctgttttcagcttattttcatgagctctccaaaatagattaagaaaacagcttacactttatacaaaaacaatt 1565623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 182
Target Start/End: Original strand, 7575694 - 7575732
Alignment:
Q  143 gcttatgacaggttcataagctgtttacagcttattttca 182  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  7575694 gcttatgacaggttcataagctgttt-cagcttattttca 7575732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 25005820 - 25005883
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaa 234  Q
    ||||| |||| | ||| ||||||  ||| |||||||||||||||||||||||||| ||||||||    
T  25005820 agcttgtttttataagctctccaggatagcttatgaaaacaacttatagcttatatgaaaacaa 25005883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 27738227 - 27738286
Alignment:
Q  195 tatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||| ||||||||||||| |||||||||||| ||||||||||  | ||||||| ||||||    
T  27738227 tatagcttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatcttt 27738286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 35590898 - 35590977
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    |||||| || ||||| |||||||||| || ||| ||||||  ||| ||||||||| | ||||||||||||||| ||||||    
T  35590898 gttcatcagttgttttcagcttatttccataagctctccatgatagcttatgaaatcgacttatagcttatacaaaaaca 35590977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 254
Target Start/End: Complemental strand, 47432158 - 47432060
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||| ||||| ||| ||||||||||||| || |||| || |||| ||||| |||||| |||||||| ||| | ||||||||| || ||||||| ||||||    
T  47432158 ttcacaagcttttttcagcttattttcataaattcttcaatataacttat-aaaacaccttatagcatattcaaaaacaatttaactttattttatcttt 47432060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 5886989 - 5887039
Alignment:
Q  143 gcttatgacaggttcataagctgtttacagcttattttcacaagttctcca 193  Q
    |||||||||| ||||||||| ||||| ||||||||||||  ||||||||||    
T  5886989 gcttatgacatgttcataagttgttttcagcttattttcgtaagttctcca 5887039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 10744378 - 10744300
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatag 219  Q
    ||||||||| || ||||||||||||||| || |||||||| | |||||||| |  | | |||||||||||| |||||||    
T  10744378 cagcttatggcatgttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaaacagcttatag 10744300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 24460401 - 24460439
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttatttt 180  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  24460401 agcttatgacatgttcataagctgtttccagcttatttt 24460439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 26779934 - 26779996
Alignment:
Q  157 cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatag 219  Q
    |||||| ||||| || |||||||||| ||||||| ||  ||| ||||||||||||||||||||    
T  26779934 cataagttgttttcaacttattttcataagttcttcaagatagcttatgaaaacaacttatag 26779996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 3224497 - 3224416
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttata 225  Q
    ||||||||| || |||||| ||||  ||||||||||||| |||||||| |  ||| ||||| |||||| | |||||||||||    
T  3224497 cttatgacatgtccataagttgttctcagcttattttcataagttctctagaatagcttataaaaacaccctatagcttata 3224416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 12564926 - 12564959
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaaca 233  Q
    |||||||||||||||||||||||||| |||||||    
T  12564926 cttatgaaaacaacttatagcttatatgaaaaca 12564959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 15558279 - 15558202
Alignment:
Q  156 tcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    ||||||| ||||| ||||||||||  | |||||||| |  |||||||||||||||| |||||| ||| ||| ||||||    
T  15558279 tcataagttgttttcagcttatttctataagttctctaggatatcttatgaaaacagcttataacttttacaaaaaca 15558202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 27140555 - 27140478
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttata 218  Q
    |||||||||||| || |||||| ||||| |||||||||| || ||| ||||||  ||| ||||| |||||| ||||||    
T  27140555 cagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 30815646 - 30815695
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttct 190  Q
    |||||||||||| ||||||||  ||||| ||||||||||||| |||||||    
T  30815646 cagcttatgacatgttcataaaatgttttcagcttattttcataagttct 30815695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 33976196 - 33976163
Alignment:
Q  201 ttatgaaaacaacttatagcttatacgaaaacaa 234  Q
    |||||||||||||||||| |||||||||||||||    
T  33976196 ttatgaaaacaacttataacttatacgaaaacaa 33976163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 41195187 - 41195256
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaaca 211  Q
    |||||||||||  || ||||||| ||| ||||||||||||| ||||||||||  |||  |||||||||||    
T  41195187 agcttatgacattttaataagcttttttcagcttattttcataagttctccaagatagtttatgaaaaca 41195256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 8e-20; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 144 - 226
Target Start/End: Complemental strand, 42121561 - 42121480
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatac 226  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||||  ||| || ||||||||||||||||||||||||    
T  42121561 cttatgacatgttcataagctgttt-cagcttatttccacaagttctccaagatagctcatgaaaacaacttatagcttatac 42121480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 17884132 - 17884032
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 253  Q
    ||||||||| ||||| ||||| ||||||| ||| |||||| |||| ||||||||||||||| ||| ||||||| ||||||||| || ||||||| |||||    
T  17884132 gttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttatacaaaaacaatttaactttattttatctt 17884033  T
Q  254 t 254  Q
    |    
T  17884032 t 17884032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 35571637 - 35571718
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaat 235  Q
    |||||| ||||| || || ||||||||||||||||||| |  ||| |||||||||||| |||||||||||||||||||||||    
T  35571637 gttcatgagctggtttcaacttattttcacaagttctctaagatagcttatgaaaacagcttatagcttatacgaaaacaat 35571718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 29263447 - 29263353
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaat 235  Q
    |||||||||| | ||||||||| ||||| |||||||||| |||||| ||| ||  ||| |||||||||||||||||| ||||||  |||||||||    
T  29263447 cagcttatgatatgttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaacaacttatcgcttatttgaaaacaat 29263353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 42685498 - 42685388
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttt 243  Q
    ||||||||| ||| ||||| |||||   ||||||||||||| ||||||||  ||| ||||||||||||||||| ||||||||  ||||||||| || ||     
T  42685498 cttatgacatgtttataagttgtttttggcttattttcacacgttctccaaaatagcttatgaaaacaacttagagcttataaaaaaacaatttaacttc 42685399  T
Q  244 atttaatcttt 254  Q
    |||| ||||||    
T  42685398 attttatcttt 42685388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 40174624 - 40174545
Alignment:
Q  157 cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||| |||||| || |||||| |||||||||||||| | || |||||||||||| |||||||||| || ||||||||||    
T  40174624 cataaactgttttcaacttattatcacaagttctccaatgtagcttatgaaaacagcttatagcttttatgaaaacaatt 40174545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 233
Target Start/End: Original strand, 7694009 - 7694095
Alignment:
Q  147 atgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    |||||| ||||||||| ||||| |||||||||| || ||  ||||||  ||| |||||||||||| |||||||||||||| ||||||    
T  7694009 atgacatgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagcttatacaaaaaca 7694095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 17822872 - 17822942
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttata 225  Q
    |||||||||| |||  |||||||||||| ||||||||||  ||| ||||||||||||||||||||| ||||    
T  17822872 ttcataagctttttttagcttattttcataagttctccaagatagcttatgaaaacaacttatagcatata 17822942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 25885877 - 25885823
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||||||||||||||||| |||||||||||| || ||||||| ||||||    
T  25885877 cttatgaaaacaacttatagcttacacgaaaacaatttaactttattttatcttt 25885823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 1706686 - 1706601
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaa 239  Q
    ||||||||||| ||| || |||||||||| ||| | ||||  |||  ||||||||||| |||||||||| ||||||||||||||||    
T  1706686 gttcataagctatttccaacttattttcataagctgtccaagatagtttatgaaaacagcttatagcttctacgaaaacaattgaa 1706601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 52746833 - 52746946
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaag 240  Q
    ||||||| |||| ||||||||||||||| ||||| ||||||| |||   | ||  ||| |||||||||||| ||||| ||||| || ||||||||| ||     
T  52746833 cagcttaagacatgttcataagctgttttcagctgattttcataagccttacaagatagcttatgaaaacagcttatggcttacacaaaaacaatttaac 52746932  T
Q  241 tttatttaatcttt 254  Q
    ||||||| ||||||    
T  52746933 tttattttatcttt 52746946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 2996647 - 2996555
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||| || |||||||| ||| || |||||||||| | | ||||||  ||| ||||||||||||||||||| ||||||  |||||||||    
T  2996647 cttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttataacttatataaaaacaatt 2996555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 50800026 - 50800117
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||| ||  ||||||||||| |||||||||| || ||||||||||  ||| |||| ||||||| ||||||||||||| |||| |||||    
T  50800026 cttatgacatgtctataagctgttttcagcttatttcca-aagttctccatgatagcttaagaaaacagcttatagcttataagaaagcaatt 50800117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 51630175 - 51630075
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 253  Q
    |||| |||| ||||| ||||||||||||| || |||| ||  ||| |||||||||| | |||||||||||||  ||||||||| || ||||||| |||||    
T  51630175 gttcgtaagatgttttcagcttattttcataaattcttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatctt 51630076  T
Q  254 t 254  Q
    |    
T  51630075 t 51630075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 247
Target Start/End: Original strand, 53294121 - 53294213
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 247  Q
    |||| ||||| ||| |||||| |||||| |||||||| | ||||  |||| ||||||||||||||| ||||| ||||||||| || |||||||    
T  53294121 ttcaaaagctattttcagcttgttttcataagttctctaatatagtttataaaaacaacttatagcatatacaaaaacaatttaaatttattt 53294213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 9841137 - 9841053
Alignment:
Q  146 tatgacaggttcataagctgttta-cagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    ||||||| || ||||||||||||  ||||||||||||||||||||  ||  ||| |||||||||||| ||||||||||||| |||||    
T  9841137 tatgacatgtccataagctgtttttcagcttattttcacaagttc--caggatagcttatgaaaacatcttatagcttatatgaaaa 9841053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 11802595 - 11802528
Alignment:
Q  157 cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttat 224  Q
    |||||||||||| ||||||||| ||| ||| ||||||  ||| |||||||||||||||| ||||||||    
T  11802595 cataagctgttttcagcttattctcataagctctccataatagcttatgaaaacaacttgtagcttat 11802528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 50662745 - 50662816
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatac 226  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||||  |||||||||||||| |||||    
T  50662745 ttcataagcttttttcaacttattttcacaatttctccaatatagcttatataaacaacttatagcatatac 50662816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 254
Target Start/End: Original strand, 54069424 - 54069523
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||||||||  | |||||||||| | ||||| || |||| ||||| ||||||| ||||||| ||||| ||||||||| ||  |||||| ||||||    
T  54069424 ttcataagctgtttttaacttattttcatatgttcttcaatataacttataaaaacaaattatagcatatacaaaaacaatttaacattattttatcttt 54069523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 254
Target Start/End: Original strand, 55414427 - 55414526
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||| ||| || |||||||||| ||||||||||  ||| ||||||||||||| ||||||| ||| | |||| || | || ||||||| ||||||    
T  55414427 ttcataagcttttttcaacttattttcataagttctccaagataacttatgaaaacaatttatagcatatgcaaaaaaaaattaactttattttatcttt 55414526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 6364209 - 6364143
Alignment:
Q  158 ataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttat 224  Q
    ||||||||||| ||||||||||||  |||||||||| |||| ||||||||||   ||||||||||||    
T  6364209 ataagctgttttcagcttattttcgtaagttctccattatagcttatgaaaattgcttatagcttat 6364143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 27721791 - 27721717
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttata 218  Q
    |||||||||  | |||||||||||| |||||||||||| |||| ||||||  ||| |||||||||||| ||||||    
T  27721791 cttatgacatatccataagctgttttcagcttattttcgcaagctctccaggataacttatgaaaacagcttata 27721717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 254
Target Start/End: Original strand, 47118981 - 47119071
Alignment:
Q  164 tgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||| |||||||| |||| ||||||| ||  ||| | |||||| ||||||||||||||||| |||||||||| || ||| ||| ||||||    
T  47118981 tgttttcagcttatcttcataagttcttcaagatagcatatgaatacaacttatagcttatatgaaaacaatttaactttgttttatcttt 47119071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 49202709 - 49202627
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||| ||||| || ||||||||||  |||| ||||  ||| |||| ||||||||||||||||||||||  ||||||||    
T  49202709 gttcataagttgttttcaacttattttcattagttatccaagatagcttacgaaaacaacttatagcttataccgaaacaatt 49202627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 253
Target Start/End: Original strand, 50681096 - 50681194
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 253  Q
    |||||||||| ||| ||  ||||||||| || ||||||| |||| |||||  |||||||||||||| ||||| ||||||||| ||  |||||| |||||    
T  50681096 ttcataagcttttttcaatttattttcataatttctccaatatagcttatataaacaacttatagcatatacaaaaacaatttaacattattttatctt 50681194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 24929570 - 24929457
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaag 240  Q
    ||||||||| || ||||||||  ||||| |||||||||| || ||| |||| | || |  |||||||||||||||||||||| || ||||||| ||  |     
T  24929570 cagcttatggcatgttcataaattgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttatagcttttatgaaaacagttagac 24929471  T
Q  241 tttatttaatcttt 254  Q
    ||||||| ||||||    
T  24929470 tttattttatcttt 24929457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 1203139 - 1203195
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacg 227  Q
    |||||||||| | ||||||||||  ||| |||||||| |||||||||||||||||||    
T  1203139 agcttattttaataagttctccaagataacttatgaagacaacttatagcttatacg 1203195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 3155667 - 3155567
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 253  Q
    |||| ||| |||||| |||||||||||||  |||||| ||  |||  ||||||||||| ||| |||||| ||| ||||||||| || ||||||| |||||    
T  3155667 gttcgtaaactgttttcagcttattttcattagttcttcaagatagtttatgaaaacagcttgtagcttgtacaaaaacaatttaactttattttatctt 3155568  T
Q  254 t 254  Q
    |    
T  3155567 t 3155567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 9760484 - 9760404
Alignment:
Q  174 ttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||| |||||||||| |||| ||||| ||||||||||||||| |||   |||| |||| || ||||||| ||||||    
T  9760484 ttattttcataagttctccaatatagcttataaaaacaacttatagcatattaaaaaagaatttaactttattttatcttt 9760404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 22666535 - 22666459
Alignment:
Q  172 gcttattttcacaagttctccactatatcttatgaaaacaa-cttatagcttatacgaaaacaattgaagtttattt 247  Q
    ||||||| ||| ||||||||||  ||| |||||||||| || ||||||||||||||| ||| ||||||| |||||||    
T  22666535 gcttattgtcataagttctccatgatagcttatgaaaaaaagcttatagcttatacgtaaaaaattgaactttattt 22666459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 234
Target Start/End: Complemental strand, 23459704 - 23459612
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaa 234  Q
    ||||||||||| ||| ||||| | ||| || ||||| |||| ||||| | ||  || ||||||||||||| ||||||||||||| ||||||||    
T  23459704 agcttatgacatgttaataagttattttcaacttatattcataagtttttcaagatctcttatgaaaacagcttatagcttataagaaaacaa 23459612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 171 - 247
Target Start/End: Original strand, 27043853 - 27043929
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 247  Q
    ||||||| |||| | ||||||||  |||  |||| |||||| |||||||||||||||||||||||| || |||||||    
T  27043853 agcttatattcatacgttctccaagatagtttataaaaacatcttatagcttatacgaaaacaatttaactttattt 27043929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 8469009 - 8468930
Alignment:
Q  157 cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||| ||||| ||| ||||||||| ||| |||| |  ||| ||||||||||||||| |||||||||| ||||| ||||    
T  8469009 cataagttgttttcagattattttcataagctctctagaataacttatgaaaacaactaatagcttatatgaaaaaaatt 8468930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 47946214 - 47946163
Alignment:
Q  202 tatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 253  Q
    ||||||||||| ||||||||||||||||||||||| || || |||| |||||    
T  47946214 tatgaaaacaatttatagcttatacgaaaacaatttaacttcattttatctt 47946163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 825486 - 825552
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaac 210  Q
    ||||||||| | |||| | |||||| ||||||||||||| ||||||||||  ||| |||||||||||    
T  825486 cttatgacatgctcattaactgttttcagcttattttcataagttctccaaaatagcttatgaaaac 825552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 16200004 - 16200066
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    |||||||||||| |||| |||||  ||| |||||||||||| |||||||| ||||| ||||||    
T  16200004 agcttattttcataagtcctccaagatagcttatgaaaacagcttatagcatatacaaaaaca 16200066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 16494816 - 16494882
Alignment:
Q  159 taagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttata 225  Q
    |||| ||||| || |||| ||| ||||| ||||||  ||| ||||||||||||||||||||||||||    
T  16494816 taagttgttttcaacttagttttacaagctctccaagatagcttatgaaaacaacttatagcttata 16494882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 28300292 - 28300398
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaag 240  Q
    |||| ||||||| |||| |||| ||||| || |||||||||| ||| ||| ||  ||| | |||||||| |  ||||||||||||| ||||||||| ||     
T  28300292 cagcctatgacatgttcttaagttgttttcaacttattttcataagctcttcaagatagcctatgaaaatagtttatagcttatacaaaaacaatttaac 28300391  T
Q  241 tttattt 247  Q
    |||||||    
T  28300392 tttattt 28300398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 30066759 - 30066853
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaat 235  Q
    |||||||| | | |||||||| |||||| |||||| |||| | ||| ||||||  ||| ||||||| |||| |||| || |||||||||||||||    
T  30066759 cagcttataatatgttcataatctgttttcagcttgtttttataagctctccaagatagcttatgagaacagcttacagtttatacgaaaacaat 30066853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 30207582 - 30207656
Alignment:
Q  159 taagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    |||||||||| |||||||||| || ||  |||| |   || |||||||||||||||||||||||||| |||||||    
T  30207582 taagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaaaca 30207656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 43932512 - 43932430
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagctta 223  Q
    ||||| |||||| || |||||| ||||| || |||||||||||||||||| ||  ||| |||||||||| |  ||||||||||    
T  43932512 cagctcatgacatgtccataagttgttttcatcttattttcacaagttcttcagaataacttatgaaaatagtttatagctta 43932430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 2465972 - 2466005
Alignment:
Q  201 ttatgaaaacaacttatagcttatacgaaaacaa 234  Q
    |||||||||||||||||||||||||| |||||||    
T  2465972 ttatgaaaacaacttatagcttatacaaaaacaa 2466005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 11158366 - 11158427
Alignment:
Q  157 cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttata 218  Q
    ||||| |||||| |||||||||| |||||| |||| |  ||| |||||||||||||||||||    
T  11158366 cataaactgttttcagcttatttccacaagctctctaagatagcttatgaaaacaacttata 11158427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 24444066 - 24444025
Alignment:
Q  190 tccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    ||||| ||| |||||||||||||||||||||||||| |||||    
T  24444066 tccacaatagcttatgaaaacaacttatagcttatatgaaaa 24444025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 28615380 - 28615331
Alignment:
Q  172 gcttattttcacaagttctccactatatcttatgaaaacaacttatagct 221  Q
    ||||||||||| ||| ||| || |||| ||||||||||||||||||||||    
T  28615380 gcttattttcataagctcttcattatagcttatgaaaacaacttatagct 28615331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 29778842 - 29778777
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||| ||| ||| ||   || ||||||||||||||||| |||||||| ||||||||||    
T  29778842 agcttattttcataagctcttcaaggtagcttatgaaaacaacttacagcttatatgaaaacaatt 29778777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 50004159 - 50004232
Alignment:
Q  163 ctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||| ||||||||||||| ||||||||||  ||| |||| ||||||| || || | ||||| ||||||||||    
T  50004159 ctgttttcagcttattttcataagttctccaagataacttaggaaaacagctcattgtttatatgaaaacaatt 50004232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 1e-18; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 39967984 - 39967884
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 253  Q
    ||||||||||||||| || ||||||||||  |||||||    ||| ||||||||||||||||||||||  ||||||||||||| |||||||||| |||||    
T  39967984 gttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttatagctagtacgaaaacaatttaagtttattttatctt 39967885  T
Q  254 t 254  Q
    |    
T  39967884 t 39967884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 24909717 - 24909646
Alignment:
Q  165 gtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||| |||| ||||| |||||| ||||||| |||||||||||||||||||||||||||||| ||||| ||||    
T  24909717 gttttcagcatatttccacaagctctccacaatatcttatgaaaacaacttatagcttatatgaaaataatt 24909646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 254
Target Start/End: Original strand, 40688993 - 40689092
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||||||||  |||||||||||| ||||| ||||  ||| |||||||| ||| ||||||||||||| ||||| |||| || ||||||| ||||||    
T  40688993 ttcataagctgttttgagcttattttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttatcttt 40689092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 420405 - 420324
Alignment:
Q  173 cttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||| |||||||||| |||| |||| | |||||||||||||| ||||| ||||||||||||  |||||| ||||||    
T  420405 cttattttcataagttctccaatatagcttacggaaacaacttatagcatatacaaaaacaattgaacattattttatcttt 420324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 12110434 - 12110325
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttt 243  Q
    ||||||||| ||||| || ||||||  || ||||||||| ||||||| ||  ||| |||||||||||| |||||||||||||| |||||||||  | |||    
T  12110434 cttatgacatgttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaaacaatttgacttt 12110335  T
Q  244 atttaatctt 253  Q
    |||| |||||    
T  12110334 attttatctt 12110325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 9038188 - 9038094
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||| ||||||||  ||||| ||||||||||||||||||||||||  |||  |||||||||||  |||||||| ||| | ||||||||    
T  9038188 cagcttatgacatgttcataat-tgttttcagcttattttcacaagttctccatgatagtttatgaaaacagtttatagctaataagtaaacaatt 9038094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 38010778 - 38010696
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||||||  ||||||||| || |||||||| |  |||  ||||||||||| ||||||||||||| ||||||||||    
T  38010778 gttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatt 38010696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 44822019 - 44821941
Alignment:
Q  158 ataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||| ||||| || |||||||||| ||||||||||  ||| |||||||||||| |||||| ||||||| |||||||||    
T  44822019 ataagttgttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttatacaaaaacaatt 44821941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 25670582 - 25670671
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    ||||||||| ||| ||||  ||||| ||||||||||||||||| ||||||  |||| |||| ||||||| | |||||||||| |||||||    
T  25670582 cttatgacatgttaataaattgttttcagcttattttcacaagctctccaagatatgttataaaaacaattgatagcttatatgaaaaca 25670671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 20526951 - 20527011
Alignment:
Q  170 cagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaa 230  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| ||| |||||| |||||||    
T  20526951 cagcttattttcataagttctacactatagcttatgaaaacagcttgtagcttttacgaaa 20527011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 33678844 - 33678744
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatctt 253  Q
    |||||| || ||||| || |||||||||||||||| ||||  ||| |||||||||||| |||||||||| ||| ||||| ||| || |||| || |||||    
T  33678844 gttcatgagatgttttcaacttattttcacaagttttccaagatagcttatgaaaacagcttatagcttttacaaaaaccatttaactttactttatctt 33678745  T
Q  254 t 254  Q
    |    
T  33678744 t 33678744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 34744073 - 34744010
Alignment:
Q  173 cttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||| | |||||||||| |||| ||||||||||||||||||| | ||||| |||||||||    
T  34744073 cttatttttataagttctccaatatagcttatgaaaacaacttataccatatacaaaaacaatt 34744010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 7244753 - 7244687
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaaca 211  Q
    |||||||| | ||||||| ||||| ||||||||||||| ||| |||||| |||| ||||||||||||    
T  7244753 ttatgacatgctcataagttgttttcagcttattttcataagctctccaatatagcttatgaaaaca 7244687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 8094347 - 8094241
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaag 240  Q
    |||||||||||| |||||| ||||||||  | |||| || || ||| |||||| |||| || | ||||| |||||||||||||||| ||| ||||| ||     
T  8094347 cagcttatgacatgttcattagctgtttttatcttacttccataagctctccaatatagctcaagaaaataacttatagcttataccaaaccaatttaac 8094248  T
Q  241 tttattt 247  Q
    |||||||    
T  8094247 tttattt 8094241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 39907867 - 39907785
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||| |||||||| |||||||||||||  ||||||| |  |||  |||||||||||  ||||||||||||| |||||||||    
T  39907867 gttcattagctgttttcagcttattttcattagttctctaagatagtttatgaaaacagtttatagcttatacaaaaacaatt 39907785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 48157116 - 48157226
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttt 243  Q
    |||||| || || |||||||||||| |||||||||| || ||| |||||   ||| ||| ||||||||| ||||||||||||  |||||||||  | |||    
T  48157116 cttatgccatgtccataagctgttttcagcttatttccataagatctcccgaatagcttgtgaaaacaaattatagcttatattaaaacaatttcacttt 48157215  T
Q  244 atttaatcttt 254  Q
    |||| ||||||    
T  48157216 attttatcttt 48157226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 19022592 - 19022657
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagc 220  Q
    |||||||| ||| | || |||||||||| |||||||||| |||| ||||| |||||||||||||||    
T  19022592 ttcataagttgtcttcaacttattttcataagttctccaatatagcttataaaaacaacttatagc 19022657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 24895399 - 24895338
Alignment:
Q  175 tattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||| || ||| ||||||| ||||||| |||||||||||||||||||||| ||||| ||||    
T  24895399 tatttccataagctctccacaatatcttgtgaaaacaacttatagcttatatgaaaataatt 24895338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 30812195 - 30812130
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||| || ||| ||||||  ||| || ||||||||| ||||||||||||||||||||||||    
T  30812195 agcttatttccataagctctccatgatagctaatgaaaacagcttatagcttatacgaaaacaatt 30812130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 33673154 - 33673069
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatac 226  Q
    ||||||||||||  || |||| |||||| |||||| |||| | || ||||||| |||| |||||| ||||| ||||||||||||||    
T  33673154 cagcttatgacatttttataaactgttttcagcttgtttttataaattctccaatatagcttatggaaacagcttatagcttatac 33673069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 46104583 - 46104644
Alignment:
Q  164 tgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttata 225  Q
    ||||| ||||||||||||| ||| ||| ||  ||| ||||||||||||||||||||||||||    
T  46104583 tgtttccagcttattttcataagctcttcagcatagcttatgaaaacaacttatagcttata 46104644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 47130810 - 47130855
Alignment:
Q  173 cttattttcacaagttctccactatatcttatgaaaacaacttata 218  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||    
T  47130810 cttattttcacaagttctccaagatagcttatgaaaacaacttata 47130855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 47177683 - 47177618
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||| || |||||||  ||| ||| |||||||| ||||||||||||| ||||||||||    
T  47177683 agcttattttcataaattctccaagatagcttttgaaaacagcttatagcttatatgaaaacaatt 47177618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 47559595 - 47559672
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatag 219  Q
    ||||| ||||| ||||||||| ||||| | ||| ||||||| ||||||||||  ||| |||||||||||| |||||||    
T  47559595 agcttttgacatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 47559672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 119954 - 119874
Alignment:
Q  174 ttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||||||||||| | | || ||||| ||||||||||||||| | |||  |||||||| || ||||||| ||||||    
T  119954 ttattttcacaagttctctaatgtaacttataaaaacaacttatagcatttacacaaacaatttaactttattttatcttt 119874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 22283754 - 22283850
Alignment:
Q  158 ataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||||| |||||||||| || |||||||| |  ||   |||||||||||  |||||||| |||| ||||||||| || ||||||| ||||||    
T  22283754 ataagctgttttcagcttatttccataagttctctaagatggtttatgaaaacagtttatagctgatacaaaaacaatttaactttattttatcttt 22283850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 30180063 - 30180015
Alignment:
Q  206 aaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||| |||||||||||||||||||||||| || ||||||| ||||||    
T  30180063 aaaacagcttatagcttatacgaaaacaatttaactttattttatcttt 30180015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 529449 - 529382
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaaca 211  Q
    ||||||||| ||||||||||||||| || | |||||||| ||| ||||||  ||| ||||||||||||    
T  529449 cttatgacaagttcataagctgttttcaacatattttcataagctctccaagatagcttatgaaaaca 529382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 5569661 - 5569724
Alignment:
Q  173 cttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||||  |||||| ||  ||| ||||||||||||||||||| ||||||| |||||||||    
T  5569661 cttattttcattagttcttcaagataacttatgaaaacaacttataacttataccaaaacaatt 5569724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 20526505 - 20526410
Alignment:
Q  159 taagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||||  ||||||||||||  |||||||||  ||| |||||||||||| |||||||| | ||| || | |||| || ||||||| ||||||    
T  20526505 taagctgtttttagcttattttcattagttctccaaaatagcttatgaaaacagcttatagcatgtacaaacataatttaactttattttatcttt 20526410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 45790447 - 45790502
Alignment:
Q  170 cagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttata 225  Q
    ||||||||||||| ||||| |||| ||||  |||| ||||||||||||||||||||    
T  45790447 cagcttattttcataagttatccaatatagtttataaaaacaacttatagcttata 45790502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 254
Target Start/End: Original strand, 46104325 - 46104408
Alignment:
Q  171 agcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||| ||||| ||||||| ||  ||| ||||||||||||  |||||||||||||||||||| || |  ||||||| ||||||    
T  46104325 agcttagtttcataagttcttcaagataacttatgaaaacagtttatagcttatacgaaaacagtttagatttattttatcttt 46104408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 425817 - 425859
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcac 183  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||    
T  425817 cagcttatgacatgttcataagctatttccagcttattttcac 425859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 1417282 - 1417228
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||||||||||| ||||||| ||||||||||  | ||||||| ||||||    
T  1417282 cttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatcttt 1417228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 20881658 - 20881724
Alignment:
Q  170 cagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||||||| |||||||  |  |||  |||||||||||||||||||||| |||| ||||||||    
T  20881658 cagcttattttcataagttctttaagatagtttatgaaaacaacttatagcttgtacggaaacaatt 20881724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 25130086 - 25130160
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatag 219  Q
    |||||||| ||||||||||||||| |||| |||||||| || || ||||  ||| ||| |||||||| |||||||    
T  25130086 ttatgacatgttcataagctgttttcagcatattttcagaaattttccaagatagcttttgaaaacagcttatag 25130160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 200 - 230
Target Start/End: Complemental strand, 28076575 - 28076545
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaa 230  Q
    |||||||||||||||||||||||||||||||    
T  28076575 cttatgaaaacaacttatagcttatacgaaa 28076545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 30535637 - 30535527
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttt 243  Q
    ||||||| | |||| |||||||||| ||| ||||||||| | |||||  |  ||| |||||| ||||| ||||||| ||||||||||||| || || ||     
T  30535637 cttatgatatgttcgtaagctgttttcaggttattttcatatgttctataagatagcttatggaaacagcttatagattatacgaaaacacttcaattta 30535538  T
Q  244 atttaatcttt 254  Q
    |||| ||||||    
T  30535537 attttatcttt 30535527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 31771778 - 31771712
Alignment:
Q  167 ttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    ||||||||||||| || |||  |||||| ||| | |||||||||| |||||||||||||| ||||||    
T  31771778 ttacagcttatttccataagcactccacgataacatatgaaaacagcttatagcttatacaaaaaca 31771712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 34083577 - 34083631
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||||| ||||||||||||||  |||||||| || ||||||| ||||||    
T  34083577 cttatgaaaacagcttatagcttatacacaaacaatttaactttattttatcttt 34083631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 39393589 - 39393665
Alignment:
Q  158 ataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||  |||||||||||| ||||||||||  ||| |||||||||| ||||||||||| |||| |||| ||||    
T  39393589 ataagctgtttt-agcttattttcataagttctccaa-atagcttatgaaaaaaacttatagctcatacaaaaataatt 39393665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 43219637 - 43219683
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagt 187  Q
    |||||||||||| ||||||||||||||| ||||||||| ||| ||||    
T  43219637 cagcttatgacatgttcataagctgttttcagcttattctcataagt 43219683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 17248616 - 17248537
Alignment:
Q  154 gttcataagctg-tttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||| |||||  |||||||||| |||||||| |  | |||||||||||| | |||||||||||||| |||||||||    
T  17248616 gttcataagctgatttac--cttattttcataagttctcta--agatcttatgaaaagagcttatagcttatacaaaaacaatt 17248537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 18350738 - 18350795
Alignment:
Q  179 ttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||| ||| ||||||  ||| |||||||||||| |||||| |||||||||||||||||    
T  18350738 ttcataagctctccatgatagcttatgaaaacagcttataacttatacgaaaacaatt 18350795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 18749810 - 18749887
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttata 218  Q
    ||||||| |||| |||||||||| |||| |||||||||| || ||||| |||   ||| |||||||||||| ||||||    
T  18749810 cagcttacgacatgttcataagcagttttcagcttatttccataagttttccgtgatagcttatgaaaacagcttata 18749887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 43694594 - 43694667
Alignment:
Q  172 gcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttat 245  Q
    ||||||||||| ||||||| |  |||| ||||| |||||| |||||||| ||||| ||||||||| || |||||    
T  43694594 gcttattttcataagttcttcgatatagcttataaaaacagcttatagcatatacaaaaacaatttaaatttat 43694667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 3e-16; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 10114551 - 10114471
Alignment:
Q  156 tcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||| ||||||| ||||||||||||| | |||||||| |||| || ||||||||| |||||||||||||| |||||||||    
T  10114551 tcatatgctgttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatagcttataccaaaacaatt 10114471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 253
Target Start/End: Original strand, 2594993 - 2595102
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttt 243  Q
    ||||||||| ||||||||| ||||| ||||||||| ||| ||||| || | |  | |||||||||||||||||| |||  ||||||||||||| || |||    
T  2594993 cttatgacatgttcataagttgttttcagcttattctcataagttgtctaatgcagcttatgaaaacaacttatggctagtacgaaaacaatttaacttt 2595092  T
Q  244 atttaatctt 253  Q
    |||| |||||    
T  2595093 attttatctt 2595102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 7514642 - 7514557
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaa 239  Q
    ||||||||||||||| || || |||||||| |||||| ||  ||| |||||||||||| ||| ||||||||| |||||||||||||    
T  7514642 gttcataagctgtttccaactaattttcactagttctgcaaaatagcttatgaaaacagcttgtagcttatatgaaaacaattgaa 7514557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 31862554 - 31862483
Alignment:
Q  157 cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacga 228  Q
    |||||||||||| ||||||||||||| ||| |||| |  ||| |||||||||||| ||||||||||||||||    
T  31862554 cataagctgttttcagcttattttcataagctctctaggataacttatgaaaacatcttatagcttatacga 31862483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 43504811 - 43504732
Alignment:
Q  158 ataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattg 237  Q
    ||||||||||| |||||||||| || ||||||||||  ||| ||||| |||||| |||||||||| ||| ||||||||||    
T  43504811 ataagctgttttcagcttatttccataagttctccaagatagcttataaaaacatcttatagcttctactaaaacaattg 43504732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 12361268 - 12361174
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||||| || |||||||||||| || ||||||| ||  || |||||   ||| |||||||||||| ||||||||||||| ||||||||||    
T  12361268 agcttatgacatgtccataagctgttttcaacttatttccattagctctcctgaataacttatgaaaacagcttatagcttatatgaaaacaatt 12361174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 21653155 - 21653045
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttt 243  Q
    ||||||||| ||||||||||| ||| ||||||||||||| ||| ||||||  ||| || |||||| ||| || |||| || |||||| ||||| || |||    
T  21653155 cttatgacacgttcataagctattttcagcttattttcataagctctccaagatagctaatgaaagcaatttgtagcctacacgaaatcaatttaacttt 21653056  T
Q  244 atttaatcttt 254  Q
    |||| ||||||    
T  21653055 attttatcttt 21653045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 248
Target Start/End: Complemental strand, 27049430 - 27049337
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttattta 248  Q
    ||||||| ||||||| || |||||||||| || |||||||  ||| |||||||||| |  |||||||||||||||||| ||||||| ||||||||    
T  27049430 gttcatatgctgttttcatcttattttcataatttctccaa-atagcttatgaaaaaagtttatagcttatacgaaaataattgaactttattta 27049337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 247
Target Start/End: Original strand, 7918783 - 7918872
Alignment:
Q  158 ataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 247  Q
    |||| |||||| |||||||||| |||||| ||| ||  ||| |||||||||||||||||||||||| | ||||| |||| || |||||||    
T  7918783 ataatctgttttcagcttatttccacaagctctacaagatagcttatgaaaacaacttatagcttacaagaaaaaaatttaactttattt 7918872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 9956820 - 9956897
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    |||||||||  |||| ||||||||||||| ||||||||||  |||  |||||||||||||||||| |||||| |||||    
T  9956820 gttcataagtagttttcagcttattttcataagttctccaagatagattatgaaaacaacttataacttataggaaaa 9956897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 27028894 - 27028813
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||| ||| ||||||||||||| ||| ||||||  ||| |||||||||||| |||||||| |||||  ||||||||    
T  27028894 ttcataagctattttcagcttattttcataagctctccaagatagcttatgaaaacagcttatagcatatacacaaacaatt 27028813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 1930099 - 1930035
Alignment:
Q  154 gttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttata 218  Q
    ||||||||||||||| ||||||||||||||||| || |||  ||| |||||||||||| ||||||    
T  1930099 gttcataagctgttttcagcttattttcacaaggtcaccaagatagcttatgaaaacagcttata 1930035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 254
Target Start/End: Original strand, 3537046 - 3537137
Alignment:
Q  165 gtttacagcttattttcacaagttctccactatatcttat--gaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||| |||||||||| || ||||||||||  |||||||||  || |||||| ||||||||||||||||||||||  | ||||||| ||||||    
T  3537046 gttttcagcttatttccataagttctccaagatatcttatatgataacaacctatagcttatacgaaaacaatttgactttattttatcttt 3537137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 10120818 - 10120738
Alignment:
Q  156 tcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    ||||| ||||||| ||||||||||||| |||||||||| ||||  | ||| ||||| ||||||| |||||| |||||||||    
T  10120818 tcatatgctgttttcagcttattttcataagttctccaatatagttaatgtaaacagcttataggttataccaaaacaatt 10120738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 20672825 - 20672757
Alignment:
Q  143 gcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaaca 211  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||| ||||||  ||| ||||| ||||||    
T  20672825 gcttatgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaaca 20672757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 14247237 - 14247300
Alignment:
Q  161 agctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttat 224  Q
    |||||||| ||||||||||||| |||||||| || |||||||| ||||||| ||||||| ||||    
T  14247237 agctgttttcagcttattttcataagttctctacgatatcttacgaaaacagcttatagtttat 14247300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 24558926 - 24558835
Alignment:
Q  145 ttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||| ||||||||||| | | || ||||||| ||  |  ||||||  ||| |||||||||||||||||||||||||||||||| ||||    
T  24558926 ttatgacacgttcataagctatgttcaacttatttacattaagtctccaagatagcttatgaaaacaacttatagcttatacgaaaataatt 24558835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 225
Target Start/End: Complemental strand, 30389175 - 30389092
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttata 225  Q
    |||| |||||| ||||||||| ||||| ||||||||||||| |||||||| |  | | |||||||||||| | |||||||||||    
T  30389175 agctaatgacatgttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaaacagcgtatagcttata 30389092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 248
Target Start/End: Original strand, 37353243 - 37353349
Alignment:
Q  142 agcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagt 241  Q
    |||||||||||  ||||||| |||||| ||| ||||||||| ||| |||| |  ||| |||| ||||||| |||||||| || || ||||||||| || |    
T  37353243 agcttatgacatattcataaactgttttcagattattttcataagctctcaaagatagcttaagaaaacagcttatagcatacacaaaaacaatttaact 37353342  T
Q  242 ttattta 248  Q
    |||||||    
T  37353343 ttattta 37353349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 38602391 - 38602297
Alignment:
Q  160 aagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||| | |||||||||||||| ||||||| |||| ||||| |||||| |||||||| ||| | ||| ||||| || || |||| ||||||    
T  38602391 aagctgttttcggcttattttcacaaattctccagtatagcttataaaaacagcttatagcatatgcaaaagcaatttaacttcattttatcttt 38602297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 8062587 - 8062506
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||| ||| ||||||||||||| ||  |||| |  ||| ||||||| |||| ||||||||||||| ||||||||||    
T  8062587 ttcataagctatttccagcttattttcataaactctctaagatagcttatgagaacatcttatagcttatatgaaaacaatt 8062506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 11569450 - 11569527
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttata 218  Q
    |||||||||||| || |||||| ||||| ||||||||||||| ||  ||||||  ||| |||||||||||| ||||||    
T  11569450 cagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaaacagcttata 11569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 9834841 - 9834877
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||||||||||||||||||||| ||||||||||    
T  9834841 cttatgaaaacaacttatagcttatatgaaaacaatt 9834877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 233
Target Start/End: Complemental strand, 10383962 - 10383870
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    ||||||||||||  ||||||||||||||||||||||||| || ||| |||  |  |||  ||| ||||||| | ||||| |||||||||||||    
T  10383962 cagcttatgacattttcataagctgtttacagcttatttccataagctctatatgatagtttacgaaaacagcatatagattatacgaaaaca 10383870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 159 - 247
Target Start/End: Original strand, 25930565 - 25930653
Alignment:
Q  159 taagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttattt 247  Q
    |||||| ||| ||||||| | ||||||||||||||  ||| ||||||||||||| ||| ||| ||||| |||||| || || |||||||    
T  25930565 taagcttttttcagcttactatcacaagttctccaagatagcttatgaaaacaatttaaagcatatacaaaaacattttaattttattt 25930653  T

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Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 233
Target Start/End: Original strand, 42215299 - 42215391
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaaca 233  Q
    |||||||||||  ||||||||||||||| |||||||||| || ||| ||||||  ||| | |||||||| |  |||||| |||||| ||||||    
T  42215299 cagcttatgacttgttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaaataggttatagattatacaaaaaca 42215391  T

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Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 30251461 - 30251524
Alignment:
Q  155 ttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttata 218  Q
    |||||||||| ||||||||||||||||| ||||  ||||  ||| |||||||||||| ||||||    
T  30251461 ttcataagctttttacagcttattttcataagtggtccaagatagcttatgaaaacagcttata 30251524  T

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Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 254
Target Start/End: Original strand, 35534637 - 35534717
Alignment:
Q  172 gcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||| ||||| |||||||||| |||| |||||||||||||| |||| |  |||| ||||||||| || ||||||| ||||||    
T  35534637 gcttactttcataagttctccaatataacttatgaaaacaacatataac--atacaaaaacaatttaactttattttatcttt 35534717  T

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Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 247
Target Start/End: Complemental strand, 38421338 - 38421235
Alignment:
Q  144 cttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagttt 243  Q
    ||||||||| || |||||| ||||| ||||||| || |||||| ||| ||  ||| ||| ||||||||||||| | ||||||| |||||| ||| | |||    
T  38421338 cttatgacatgtccataagttgttttcagcttacttacacaagatcttcaagatagcttttgaaaacaacttacaacttataccaaaacatttggacttt 38421239  T
Q  244 attt 247  Q
    ||||    
T  38421238 attt 38421235  T

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Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 38874707 - 38874628
Alignment:
Q  157 cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaatt 236  Q
    |||||||| |||  |||||||||||| | ||||||||  ||| |||||||||||| |||| |||||||| ||||| ||||    
T  38874707 cataagctatttttagcttattttcatatgttctccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatt 38874628  T

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Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 3254302 - 3254264
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattt 179  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  3254302 cagcttatgacatgttcataagctgttttcagcttattt 3254264  T

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Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 16734047 - 16733993
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||| ||||||||||||||| ||||| ||||||||| ||||||| || ||||||    
T  16734047 cttatcaaaacaacttatagcatatacaaaaacaatttaagtttagtttatcttt 16733993  T

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Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 28769348 - 28769422
Alignment:
Q  157 cataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    |||||| ||||| |||||||||| || ||  ||||||  ||| |||||||||||| ||||||||||||| |||||    
T  28769348 cataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttataagaaaa 28769422  T

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Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 34770910 - 34770856
Alignment:
Q  200 cttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    |||||||||||||||||||||||| | ||||||||||  | ||||||| ||||||    
T  34770910 cttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatcttt 34770856  T

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Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 38648413 - 38648315
Alignment:
Q  156 tcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaattgaagtttatttaatcttt 254  Q
    ||||||||| |||  ||| || ||||| ||||||| ||  ||| ||||||||||||||| ||| | ||||| ||||||| | || ||||||||||||||    
T  38648413 tcataagcttttttaagcgtaatttcataagttctacaagatagcttatgaaaacaactcataacatatacaaaaacaagttaattttatttaatcttt 38648315  T

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Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 12851253 - 12851160
Alignment:
Q  141 cagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatatcttatgaaaacaacttatagcttatacgaaaacaa 234  Q
    |||||||| ||| ||||||||| ||||| | ||||||||||| ||| |||| |  | | ||||||||||||| || ||||||| |||| |||||    
T  12851253 cagcttataacatgttcataagatgttttcggcttattttcataagctctcaaggaaagcttatgaaaacaatttctagcttacacgacaacaa 12851160  T

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Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 35869865 - 35869824
Alignment:
Q  190 tccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    ||||| ||| |||||||||||||||||||||||||| |||||    
T  35869865 tccacaatagcttatgaaaacaacttatagcttatatgaaaa 35869824  T

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Target: scaffold0652 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 3046 - 3003
Alignment:
Q  188 tctccactatatcttatgaaaacaacttatagcttatacgaaaa 231  Q
    |||||| |||| ||||| ||||||||||||||||||||||||||    
T  3046 tctccaatatagcttattaaaacaacttatagcttatacgaaaa 3003  T

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Target: scaffold0475 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 236
Target Start/End: Original strand, 11814 - 11843
Alignment:
Q  207 aaacaacttatagcttatacgaaaacaatt 236  Q
    ||||||||||||||||||||||||||||||    
T  11814 aaacaacttatagcttatacgaaaacaatt 11843  T

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