View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17331_high_11 (Length: 351)
Name: NF17331_high_11
Description: NF17331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17331_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 13 - 285
Target Start/End: Original strand, 14964083 - 14964353
Alignment:
| Q |
13 |
aaaattaacagtaggtttaataaaagtacataagtcgaattaaattattacactcaagctaattaagtattttggtggtatacacgtacttgatatgttt |
112 |
Q |
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| T |
14964083 |
aaaattaacagtaggtttaataaaagtacataagtcgaattaaattattacactcaagctaattaagtattttggtggtatacacgtacttgatatgttt |
14964182 |
T |
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| Q |
113 |
aattaattattcaatgagtcgtcgtggcctaacaatggatatggtatattgacagctaagtgtttgattaattttataattatagtctaactcgtgtttt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |
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| T |
14964183 |
aattaattattcaatgagtcgtcgtggcctaacaatggatatggtatattgacagctaagtgtttgattaattttataat--tagtctaactcgtgcttt |
14964280 |
T |
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| Q |
213 |
gttttacctaattaagcttgatgaagtatatttattctggtttatgtatttttcatattacaatagtggaccc |
285 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
14964281 |
gttttacctaattaagcttgatgaagtatatttcttctggtttatgtatttttcatattacaatagtggaccc |
14964353 |
T |
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