View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17331_low_12 (Length: 298)
Name: NF17331_low_12
Description: NF17331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17331_low_12 |
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Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 19 - 249
Target Start/End: Complemental strand, 23518317 - 23518087
Alignment:
| Q |
19 |
ctccctgccatcattacattgataatattcttctctccactcctattcactactactctatttactgtcattgttgtgatcttgactaacaccaatccat |
118 |
Q |
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| T |
23518317 |
ctccctgccatcattacattgataatattcttctctccactccttttcactactactctatttactgtcattgttgtgatcttgactaacaccactccat |
23518218 |
T |
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| Q |
119 |
tcaataatgaccgtattcatgttccaagacgtcgcgaggaaattgttgaatattatgtcatcgcaaatcaccaccaccaaccccaccctgacaaccacaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23518217 |
tcaataatgaccgtattcatgttccaagacgtcgcgaggaaattgttgaatattatgtcatcgcaaatcaccaccaccaaccccaccctgacaaccacaa |
23518118 |
T |
|
| Q |
219 |
ccatcatcctgcgttacctcctcctgacaag |
249 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
23518117 |
ccatcatcctgcgttacctcctcctgacaag |
23518087 |
T |
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