View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17331_low_14 (Length: 280)
Name: NF17331_low_14
Description: NF17331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17331_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 35499640 - 35499917
Alignment:
| Q |
1 |
ccatacggtgctccttcatattcagatccagtaacccatttcctcgacccgaccctaacactgcaaaccccgattcggagccccggatccaccactttcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35499640 |
ccatacggtgctccttcatattcagatccagtaacccatttcctcgacccgaccctaacactgcaaaccccgattcggagccccggatccaccactttcc |
35499739 |
T |
|
| Q |
101 |
cattctccctaatatcaacacatgatctgggacacctacccgcttcccaaactccttcaactctcctccactggcccgacccaatatccaaaacctccgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
35499740 |
cattctccctaatatcaacacatgatctgggacaccgacccgcttcccaaactccttcaactctcctccactggcccgacccaatatccagcacctccgc |
35499839 |
T |
|
| Q |
201 |
agaatcatcaaacatcccttgactctccgtcgcataaccgctaaccacccaaaactcgccgccgacaaccgtttcttc |
278 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
35499840 |
agaatcatcaaacatcccttgactctccgtcgcataaccgctaaccacccaaaactcgccgccgacaaccgttccttc |
35499917 |
T |
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