View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17332_high_8 (Length: 252)
Name: NF17332_high_8
Description: NF17332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17332_high_8 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 27005237 - 27005474
Alignment:
| Q |
15 |
aaaatataagtgagatgattggtatatccaatgtctactttcacttccattactaaccaatgactccactataagaaaaacttaatataaagatctactc |
114 |
Q |
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| T |
27005237 |
aaaatataagtgagatgattggtatatccaatgtctactttcacttccattactaaccaatgactccactataagaaaaacttaatataaagatctactc |
27005336 |
T |
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| Q |
115 |
tcccatcaagttaactttgctctagtaccacttgttggagagcccccaaaacacagggagcaacaactagttaataatcaggaacaacaaaagactgaaa |
214 |
Q |
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| T |
27005337 |
tcccatcaagttaacttggctctggtaccacttgttggagagcccccgaaacacagggagcaacaacaagttaataatcaggaacaacaaaagactgaaa |
27005436 |
T |
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| Q |
215 |
caccacatttccaccaaaaaccttagagcattacccat |
252 |
Q |
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| T |
27005437 |
caccacatttccaccaaaaaccttagagcattacccat |
27005474 |
T |
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