View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17333_low_6 (Length: 344)
Name: NF17333_low_6
Description: NF17333
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17333_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 47 - 329
Target Start/End: Original strand, 37201791 - 37202073
Alignment:
| Q |
47 |
ttgactaataagacgagactaaaagtttggtggaaacaggaacaatgagaaagatgacactaatgataatgaaggaacttttataagaccaatgaggtga |
146 |
Q |
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| T |
37201791 |
ttgactaataagacgagactaaaagtttggtggagacaggaacaatgagaaagatgacactaatgataatgaaggaacttttataagaccgatgaggtga |
37201890 |
T |
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| Q |
147 |
ggctggaaaaaccaatgagaacatcagtgtgagactcaagtaaaagccaggttggctagaagaatatgttaagagacattgaaacaacaaatgaagaata |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37201891 |
ggctggaaaaaccaatgagaacatcagtgtgagactcaagtaaaagccaggttggctagaagaatatgttaagagacattgaaacaacaaatgaagaata |
37201990 |
T |
|
| Q |
247 |
acacacctaccttagtcacttttactcaatttgaagatcatgtgcactttgaatatgcggtgaagaatctcaattggaggaga |
329 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
37201991 |
acacacctaccttagtcacttttactcaatttgaagatcatgtgcactttgaatatgcagtgaagaatctcaattggaggaga |
37202073 |
T |
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