View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17334_low_2 (Length: 222)
Name: NF17334_low_2
Description: NF17334
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17334_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 10894123 - 10894219
Alignment:
| Q |
19 |
aactaaacatgaacctagacatattttttcttcattttaattatgaagagattgataattgttataatgagaataaattgaggaaatgtgaatgaac |
115 |
Q |
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| T |
10894123 |
aactaaacatgaacctagacatattttttcttcattttaattatgaagagattgataattgttataatgagaataaattgaggaaatgtgaatgaac |
10894219 |
T |
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Target: chr7; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 10894242 - 10894301
Alignment:
| Q |
146 |
ttacttggattatcatcttttgcagaagaggccatctctgactcagcttccgtccagtat |
205 |
Q |
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| T |
10894242 |
ttacttggattatcatcttttgcagaagaggccatctctgactcagcttccgtccagtat |
10894301 |
T |
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