View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17335_low_9 (Length: 224)
Name: NF17335_low_9
Description: NF17335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17335_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 23530934 - 23531142
Alignment:
| Q |
1 |
cgttggcgaaacttttgagtttgatcacaatagatatcaaaacttgagtcatgataggttagtttctgacactgatgatgaagacggcgaatatgactat |
100 |
Q |
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| T |
23530934 |
cgttggcgaaacttttgagtttgatcacaatagatatcaaaacttgagtcatgataggttagtttctgacactgatgatgaagacggcgaatatgactat |
23531033 |
T |
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| Q |
101 |
gatgatcacgatgaaggatttaacagaattatcgtagatacaaataataacctaaagggaaaagagggtagtttagtctcatactcttctttggtctatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23531034 |
gatgatcacgatgaaggatttaacagaattatcgtagatacaaataataacctaaatggaaaagagggtagtttagtctcatactcttctttggtctatc |
23531133 |
T |
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| Q |
201 |
ctatctctg |
209 |
Q |
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||||||||| |
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| T |
23531134 |
ctatctctg |
23531142 |
T |
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