View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17336_high_1 (Length: 408)
Name: NF17336_high_1
Description: NF17336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17336_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 17 - 373
Target Start/End: Original strand, 32242050 - 32242389
Alignment:
| Q |
17 |
ccattgtctcgatagttttataacactagattgttgtttaggttaaaatcttctcggatgacaatagatatggcaagtgtaagttttagacattatgaat |
116 |
Q |
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| T |
32242050 |
ccattgcctcgatagttttataacactagattgttgtttaggttaaaatcttctcggatgacaatagatatggcaagtgtaagttttatacattatgaat |
32242149 |
T |
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| Q |
117 |
ttttggatttccattatctttaggttgttacagggtatgaaatataatatggtgttagttctaaatttgttgacctgacccgcttttataaaaagtttgt |
216 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32242150 |
ttttggatttccattatctttagg----------gtatgaaatataatatggtgttagttctaaatttgttgacctgacccgcttttataaaaagtttgt |
32242239 |
T |
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| Q |
217 |
agatttgtttagttagcctacctactattatggtaaaaaggtgaaatatataaacttttgaaagaagcaacttatacattgtgtactttgaaaagnnnnn |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32242240 |
agatttgtttagttagcctacctactattatggtaaaaaggtgaaatatataaacttttgaaagaagcaacttatacattgtgtactttgaaaagaaaaa |
32242339 |
T |
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| Q |
317 |
nnnnttgtgttccaaattttctattttcacaacaatccttttatgctggaattcaca |
373 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
32242340 |
aaaattgtgttccaa-------attttcacaacaatccttttatgctggaattcaca |
32242389 |
T |
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