View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17338_high_14 (Length: 330)
Name: NF17338_high_14
Description: NF17338
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17338_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 8e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 45615885 - 45616122
Alignment:
| Q |
13 |
agaacctgtggctactctttatttatgccgctctggaatttgaactaatagaa--gattataaaccataagtagggttcatctaagaatatagctaggtt |
110 |
Q |
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| T |
45615885 |
agaacctgtggctactctttatttatgccgctctggaatttggactaatagcacagattataagccataagtagggtccatctaagaatatagctaggtt |
45615984 |
T |
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| Q |
111 |
caaagtaggataccagcttgtccttttagaaatagaattttggaaaagaaatcatta-agaaaatgggtggttaagacatcagtcaaaaataaaata-tt |
208 |
Q |
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| T |
45615985 |
caaagtaggataccagcttgcccttttagaaatagaatttttgaaaagaaatcattagagaaaatggttggttaagtcatcagtcaaaaataagatactt |
45616084 |
T |
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| Q |
209 |
aaatcatagactaaacaataagagtaattagtaggcac |
246 |
Q |
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||||||||||||||||| |||||||||||||||||||| |
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| T |
45616085 |
aaatcatagactaaacattaagagtaattagtaggcac |
45616122 |
T |
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