View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17338_high_19 (Length: 319)

Name: NF17338_high_19
Description: NF17338
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17338_high_19
NF17338_high_19
[»] scaffold0433 (2 HSPs)
scaffold0433 (118-319)||(7107-7308)
scaffold0433 (26-82)||(7015-7071)
[»] scaffold0234 (4 HSPs)
scaffold0234 (118-319)||(2327-2528)
scaffold0234 (118-319)||(11218-11419)
scaffold0234 (26-82)||(2564-2620)
scaffold0234 (26-82)||(11455-11511)
[»] chr7 (27 HSPs)
chr7 (118-319)||(29327784-29327985)
chr7 (118-319)||(11536068-11536269)
chr7 (118-319)||(11542986-11543187)
chr7 (120-319)||(18561009-18561208)
chr7 (120-319)||(15148144-15148343)
chr7 (120-319)||(15152445-15152644)
chr7 (124-319)||(12738542-12738737)
chr7 (120-319)||(12750828-12751027)
chr7 (120-310)||(18257857-18258047)
chr7 (124-306)||(13392157-13392338)
chr7 (140-319)||(2364917-2365095)
chr7 (25-82)||(2653275-2653332)
chr7 (25-82)||(12738442-12738499)
chr7 (151-310)||(7396221-7396381)
chr7 (26-82)||(11543223-11543279)
chr7 (124-211)||(39111819-39111905)
chr7 (26-82)||(11536305-11536361)
chr7 (26-82)||(12750733-12750789)
chr7 (26-82)||(15152350-15152406)
chr7 (26-81)||(29327690-29327745)
chr7 (26-82)||(15148049-15148105)
chr7 (192-233)||(3132748-3132789)
chr7 (168-267)||(10234179-10234278)
chr7 (26-81)||(13392030-13392085)
chr7 (118-150)||(2653207-2653239)
chr7 (26-82)||(18258087-18258143)
chr7 (147-197)||(29982995-29983045)
[»] chr5 (20 HSPs)
chr5 (118-319)||(24695472-24695673)
chr5 (118-319)||(18569869-18570070)
chr5 (120-319)||(19714504-19714703)
chr5 (124-319)||(19707224-19707419)
chr5 (123-306)||(27347497-27347679)
chr5 (124-310)||(22547031-22547217)
chr5 (122-303)||(17285754-17285935)
chr5 (118-227)||(39537962-39538071)
chr5 (184-319)||(18807040-18807175)
chr5 (122-303)||(17298907-17299088)
chr5 (26-82)||(24695709-24695765)
chr5 (124-227)||(31886537-31886640)
chr5 (26-82)||(19714742-19714798)
chr5 (238-319)||(39538708-39538789)
chr5 (26-82)||(19707462-19707518)
chr5 (26-82)||(27347722-27347778)
chr5 (144-233)||(33477390-33477479)
chr5 (34-82)||(18570108-18570156)
chr5 (26-81)||(39537870-39537925)
chr5 (168-233)||(11479420-11479486)
[»] chr4 (46 HSPs)
chr4 (118-319)||(19926766-19926967)
chr4 (118-319)||(10621339-10621540)
chr4 (118-319)||(26970463-26970664)
chr4 (118-319)||(55612683-55612884)
chr4 (118-319)||(5707320-5707521)
chr4 (118-319)||(10628418-10628619)
chr4 (118-319)||(26963640-26963841)
chr4 (120-319)||(28393140-28393339)
chr4 (118-319)||(5713948-5714149)
chr4 (118-319)||(868597-868798)
chr4 (120-319)||(18262214-18262413)
chr4 (120-319)||(4426610-4426808)
chr4 (120-319)||(18269070-18269274)
chr4 (130-316)||(8845215-8845401)
chr4 (130-316)||(8858179-8858365)
chr4 (118-233)||(12357136-12357251)
chr4 (126-317)||(20311299-20311491)
chr4 (124-310)||(5668140-5668327)
chr4 (124-319)||(10677561-10677753)
chr4 (124-319)||(10891201-10891393)
chr4 (120-317)||(5616215-5616414)
chr4 (124-318)||(35223576-35223760)
chr4 (25-82)||(19927003-19927060)
chr4 (26-82)||(5713856-5713912)
chr4 (26-82)||(26963548-26963604)
chr4 (26-82)||(26970371-26970427)
chr4 (144-310)||(21454152-21454319)
chr4 (26-82)||(5707228-5707284)
chr4 (26-82)||(10621576-10621632)
chr4 (26-82)||(12357044-12357100)
chr4 (28-82)||(868507-868561)
chr4 (25-82)||(17142372-17142429)
chr4 (26-82)||(10628655-10628711)
chr4 (26-82)||(55612594-55612650)
chr4 (24-82)||(4426847-4426905)
chr4 (26-80)||(28393380-28393434)
chr4 (26-82)||(18268976-18269032)
chr4 (156-317)||(56516094-56516255)
chr4 (167-233)||(39074279-39074346)
chr4 (33-82)||(55992680-55992729)
chr4 (168-227)||(11161913-11161972)
chr4 (256-307)||(39074218-39074269)
chr4 (41-82)||(5668371-5668412)
chr4 (34-82)||(8845118-8845166)
chr4 (34-82)||(8858082-8858130)
chr4 (42-82)||(18262136-18262176)
[»] chr1 (26 HSPs)
chr1 (118-319)||(18252030-18252231)
chr1 (118-319)||(27131415-27131616)
chr1 (118-319)||(18532520-18532721)
chr1 (120-319)||(16359041-16359240)
chr1 (120-319)||(27310583-27310782)
chr1 (120-319)||(21171239-21171438)
chr1 (124-319)||(36816639-36816834)
chr1 (118-319)||(3855925-3856126)
chr1 (118-319)||(22657227-22657429)
chr1 (124-318)||(27277564-27277756)
chr1 (152-310)||(12006554-12006712)
chr1 (152-317)||(12014292-12014457)
chr1 (130-316)||(9917927-9918106)
chr1 (25-82)||(18251935-18251992)
chr1 (25-82)||(18532757-18532814)
chr1 (26-82)||(27310821-27310877)
chr1 (26-82)||(16359280-16359336)
chr1 (148-225)||(3403248-3403325)
chr1 (148-225)||(3443494-3443571)
chr1 (26-82)||(21171479-21171535)
chr1 (26-75)||(22657472-22657521)
chr1 (124-193)||(30720625-30720694)
chr1 (34-75)||(36816885-36816926)
chr1 (26-82)||(3856164-3856220)
chr1 (26-82)||(27131652-27131704)
chr1 (26-82)||(27277800-27277856)
[»] chr3 (53 HSPs)
chr3 (118-319)||(6110064-6110265)
chr3 (118-319)||(10572598-10572799)
chr3 (120-319)||(16482489-16482688)
chr3 (124-319)||(17781124-17781319)
chr3 (120-319)||(18522665-18522864)
chr3 (118-319)||(15600890-15601091)
chr3 (118-319)||(15607435-15607636)
chr3 (118-304)||(8490488-8490674)
chr3 (121-319)||(13211305-13211503)
chr3 (118-319)||(13248607-13248808)
chr3 (124-319)||(19089751-19089946)
chr3 (118-319)||(15357592-15357793)
chr3 (124-319)||(10579361-10579556)
chr3 (120-319)||(13516813-13517012)
chr3 (120-319)||(18519980-18520176)
chr3 (120-319)||(17200190-17200389)
chr3 (124-319)||(32056906-32057101)
chr3 (137-319)||(15342225-15342407)
chr3 (118-279)||(18640792-18640953)
chr3 (124-319)||(1647527-1647726)
chr3 (118-310)||(29924971-29925163)
chr3 (118-310)||(29974124-29974316)
chr3 (120-306)||(16200128-16200313)
chr3 (120-306)||(16200434-16200619)
chr3 (125-319)||(24253394-24253589)
chr3 (224-319)||(17136465-17136560)
chr3 (120-181)||(18534758-18534819)
chr3 (26-82)||(6109972-6110028)
chr3 (26-82)||(8490396-8490452)
chr3 (26-82)||(13248515-13248571)
chr3 (26-82)||(13211211-13211267)
chr3 (26-82)||(18640989-18641045)
chr3 (26-75)||(10579604-10579653)
chr3 (120-165)||(18510924-18510969)
chr3 (26-82)||(17136137-17136193)
chr3 (26-75)||(10572841-10572890)
chr3 (26-82)||(15607672-15607729)
chr3 (26-75)||(17200434-17200483)
chr3 (26-82)||(15351237-15351293)
chr3 (26-82)||(15357829-15357885)
chr3 (26-82)||(16482727-16482782)
chr3 (26-82)||(18519885-18519941)
chr3 (25-82)||(1647768-1647825)
chr3 (26-82)||(15601127-15601184)
chr3 (26-82)||(13516719-13516775)
chr3 (26-70)||(17781370-17781414)
chr3 (26-70)||(19089997-19090041)
chr3 (26-82)||(32057144-32057200)
chr3 (26-82)||(18510829-18510885)
chr3 (26-82)||(18522570-18522626)
chr3 (34-82)||(18534671-18534719)
chr3 (26-82)||(29924879-29924935)
chr3 (26-82)||(29974032-29974088)
[»] chr6 (29 HSPs)
chr6 (120-319)||(16566326-16566525)
chr6 (118-319)||(29308890-29309091)
chr6 (118-319)||(29315850-29316051)
chr6 (118-319)||(17691446-17691647)
chr6 (118-319)||(27381258-27381459)
chr6 (118-319)||(27471641-27471842)
chr6 (120-319)||(188983-189182)
chr6 (120-319)||(17684475-17684674)
chr6 (120-319)||(11651725-11651924)
chr6 (120-319)||(25537165-25537364)
chr6 (120-308)||(13359286-13359474)
chr6 (137-310)||(8509941-8510115)
chr6 (141-310)||(27925772-27925946)
chr6 (28-82)||(17691683-17691737)
chr6 (26-75)||(27381502-27381551)
chr6 (26-75)||(27471885-27471934)
chr6 (26-82)||(29308798-29308854)
chr6 (26-82)||(29315758-29315814)
chr6 (157-319)||(20553593-20553755)
chr6 (26-82)||(17684712-17684768)
chr6 (26-80)||(11651630-11651684)
chr6 (26-82)||(25537405-25537461)
chr6 (156-319)||(17850501-17850663)
chr6 (125-180)||(31258065-31258120)
chr6 (156-319)||(20736609-20736773)
chr6 (34-82)||(13359512-13359560)
chr6 (34-82)||(16566563-16566611)
chr6 (24-82)||(189221-189282)
chr6 (156-233)||(28605854-28605931)
[»] scaffold0657 (2 HSPs)
scaffold0657 (118-319)||(993-1194)
scaffold0657 (25-82)||(900-957)
[»] scaffold0390 (4 HSPs)
scaffold0390 (118-319)||(6940-7141)
scaffold0390 (118-319)||(13956-14157)
scaffold0390 (26-82)||(7177-7233)
scaffold0390 (26-82)||(14193-14249)
[»] chr8 (18 HSPs)
chr8 (118-319)||(21940665-21940866)
chr8 (120-319)||(28554885-28555084)
chr8 (120-319)||(22171491-22171688)
chr8 (124-317)||(6094129-6094322)
chr8 (124-319)||(24642655-24642850)
chr8 (124-251)||(24636860-24636987)
chr8 (130-319)||(38232383-38232570)
chr8 (148-309)||(32872857-32873019)
chr8 (25-82)||(22070107-22070164)
chr8 (26-82)||(21940573-21940629)
chr8 (26-75)||(24642556-24642605)
chr8 (26-82)||(6094031-6094087)
chr8 (26-82)||(22171396-22171452)
chr8 (26-82)||(28554791-28554847)
chr8 (156-219)||(10920234-10920297)
chr8 (139-197)||(2375027-2375085)
chr8 (240-319)||(14983926-14984004)
chr8 (26-63)||(24636605-24636642)
[»] chr2 (11 HSPs)
chr2 (118-319)||(21330254-21330455)
chr2 (118-319)||(18796506-18796707)
chr2 (120-316)||(18619807-18620002)
chr2 (124-263)||(19692598-19692737)
chr2 (182-310)||(20977956-20978084)
chr2 (152-319)||(36270199-36270367)
chr2 (25-82)||(21330493-21330550)
chr2 (152-310)||(18822115-18822275)
chr2 (238-319)||(18852065-18852146)
chr2 (26-82)||(19692773-19692829)
chr2 (154-309)||(36802664-36802820)
[»] scaffold0220 (2 HSPs)
scaffold0220 (118-319)||(18288-18489)
scaffold0220 (26-82)||(18196-18252)
[»] scaffold0186 (2 HSPs)
scaffold0186 (118-319)||(25996-26197)
scaffold0186 (26-81)||(26231-26286)
[»] scaffold0063 (2 HSPs)
scaffold0063 (120-319)||(5531-5730)
scaffold0063 (34-82)||(5444-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (120-301)||(230365-230545)
scaffold0008 (26-82)||(230584-230640)
[»] scaffold0176 (2 HSPs)
scaffold0176 (118-181)||(8447-8510)
scaffold0176 (26-82)||(8546-8602)
[»] scaffold0203 (1 HSPs)
scaffold0203 (26-82)||(23769-23825)
[»] scaffold0326 (2 HSPs)
scaffold0326 (26-74)||(16523-16571)
scaffold0326 (118-151)||(16615-16648)
[»] scaffold0705 (1 HSPs)
scaffold0705 (26-82)||(41-97)
[»] scaffold0637 (1 HSPs)
scaffold0637 (26-82)||(8944-9000)
[»] scaffold0767 (1 HSPs)
scaffold0767 (21-62)||(1-42)
[»] scaffold0565 (2 HSPs)
scaffold0565 (28-82)||(10202-10256)
scaffold0565 (137-168)||(10127-10158)
[»] scaffold0170 (1 HSPs)
scaffold0170 (26-75)||(5878-5927)
[»] scaffold0032 (1 HSPs)
scaffold0032 (147-219)||(92194-92267)


Alignment Details
Target: scaffold0433 (Bit Score: 186; Significance: 1e-101; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 7107 - 7308
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 7306  T
Q  318 ct 319  Q
    ||    
T  7307 ct 7308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 7015 - 7071
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7015 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 186; Significance: 1e-101; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 2528 - 2327
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 2329  T
Q  318 ct 319  Q
    ||    
T  2328 ct 2327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 11419 - 11218
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11220  T
Q  318 ct 319  Q
    ||    
T  11219 ct 11218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 2620 - 2564
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2620 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 11511 - 11455
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11511 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 29327784 - 29327985
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29327983  T
Q  318 ct 319  Q
    ||    
T  29327984 ct 29327985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 11536269 - 11536068
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11536070  T
Q  318 ct 319  Q
    ||    
T  11536069 ct 11536068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 11543187 - 11542986
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11542988  T
Q  318 ct 319  Q
    ||    
T  11542987 ct 11542986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 120 - 319
Target Start/End: Original strand, 18561009 - 18561208
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||| | ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagact 18561208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 120 - 319
Target Start/End: Original strand, 15148144 - 15148343
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||| || |||||||||||||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15148343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 120 - 319
Target Start/End: Original strand, 15152445 - 15152644
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||  ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15152644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 124 - 319
Target Start/End: Original strand, 12738542 - 12738737
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||       
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttg 12738641  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12738642 ttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 12738737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 120 - 319
Target Start/End: Original strand, 12750828 - 12751027
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    | | |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgtggatagact 12751027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 120 - 310
Target Start/End: Complemental strand, 18258047 - 18257857
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 310  Q
    ||||||||||| || || | |||||| |||||||| ||||||||| ||| |||  |||| ||||| || ||| ||||| ||||||||||||    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgt 18257857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 124 - 306
Target Start/End: Original strand, 13392157 - 13392338
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||| | |||||||| |||||||| |||||||| | ||||||| |||||| ||||    
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-ccca 13392255  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 306  Q
    |||||   || || | |||||| ||||||||  ||||||| |||||||| |||  |||||| ||||||| |||||||||||||    
T  13392256 ttaaatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 140 - 319
Target Start/End: Original strand, 2364917 - 2365095
Alignment:
Q  140 ttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaac 239  Q
    ||||| |||||||||||||||||||| |||||||| ||||||| | |||||||||||||||| |  |||||| |||||| ||||||||||  ||||| |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  240 tattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||| ||| |||  |||||||| | |||||| ||| || |||| ||||||| |||||||||||| |||| ||| ||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgtgggtcgact 2365095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 2653332 - 2653275
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  2653332 atgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 12738442 - 12738499
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12738442 atgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 151 - 310
Target Start/End: Original strand, 7396221 - 7396381
Alignment:
Q  151 caaaataataaagtccctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaa 249  Q
    |||||||| || ||| ||||||||||||||   ||||| ||||||||||||||| |||||||  |||||||| |||||||||||  ||| |||||| |||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  250 gtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 310  Q
      || ||||||||||| ||| || ||| |  |||   ||||||||||||||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgt 7396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 11543279 - 11543223
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  11543279 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 211
Target Start/End: Original strand, 39111819 - 39111905
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaat 211  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||  |||| |||||||| |||||||||||  |||||||    
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaat 39111905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 11536361 - 11536305
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  11536361 tgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 12750733 - 12750789
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  12750733 tgttggagtaagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 15152350 - 15152406
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  15152350 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 29327690 - 29327745
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 81  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||    
T  29327690 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 15148049 - 15148105
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |||| ||||||    
T  15148049 tgttggagtaagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 3132748 - 3132789
Alignment:
Q  192 aacattaagtataacttaattgtgagaccccattaaacataa 233  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataa 3132789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 10234179 - 10234278
Alignment:
Q  168 tagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagtatctgtagtcaagctt 267  Q
    |||||||||||||| |||||||| | |||||| |||||||||||  |||||  ||||||||||||| || |||| | | ||| ||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataaagacactaatattaaaataaatgtagtcaagctt 10234278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 13392030 - 13392085
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 81  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||| ||||| |||||    
T  13392030 tgttggagtaagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  118 acaaggcatttctttattgattttgttttgttt 150  Q
    |||||||||||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 18258143 - 18258087
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||| |||||||||||| ||||||||| |||||| ||| ||||||    
T  18258143 tgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 29982995 - 29983045
Alignment:
Q  147 gtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatt 197  Q
    |||||||| ||||||||||  ||||| ||||| ||||||||||||||||||    
T  29982995 gtttcaaagtaataaagtctttagaacagttaatctgtttaatggaacatt 29983045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 186; Significance: 1e-101; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 24695673 - 24695472
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtaga 24695474  T
Q  318 ct 319  Q
    ||    
T  24695473 ct 24695472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 18570070 - 18569869
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    ||||| |||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtaga 18569871  T
Q  318 ct 319  Q
    ||    
T  18569870 ct 18569869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 19714703 - 19714504
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||| ||||||| ||| |||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagact 19714504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 124 - 319
Target Start/End: Complemental strand, 19707419 - 19707224
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccg 19707320  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||| ||| ||||||| ||| |||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19707319 ttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagact 19707224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 123 - 306
Target Start/End: Complemental strand, 27347679 - 27347497
Alignment:
Q  123 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccc 222  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| ||||||||||||| |||||||| | ||||||| |||||| |||    
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-ccc 27347581  T
Q  223 attaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 306  Q
    |||||||  || || | |||||| ||||||| |||||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  27347580 attaaacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactatt 27347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 124 - 310
Target Start/End: Complemental strand, 22547217 - 22547031
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    ||||| |||||| |||||||||| ||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | ||    
T  22547217 catttatttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctca 22547118  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 310  Q
    ||||| |||  || | |||| | |||||||  | |||||| |||||||| |||||| |||| |||||||  ||||||||||||||||    
T  22547117 ttaaatatatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgt 22547031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 17285935 - 17285754
Alignment:
Q  122 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccc 221  Q
    ||||||| ||||||||||||||| ||||||||||||||||  |||  ||||||||||||||||||||||||||||||||| | ||||||| |||| ||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccc 17285836  T
Q  222 cattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagact 303  Q
     | |||||  ||||| | |||||| |||||||   ||||| | |||||||| ||| |||||||  ||||||||||| |||||    
T  17285835 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| |||||||||| ||||||||||||||||||||||  | |||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  218 accccattaa 227  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 184 - 319
Target Start/End: Complemental strand, 18807175 - 18807040
Alignment:
Q  184 tttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaa-actattctaaaagtatctgtagtcaagctttattgagaagtggga 282  Q
    |||||||||||||||||| | ||||||| ||||||| |||||||| |||||| | | |||||| ||||||||| ||||||||| |||||| |||||  ||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  283 tatcattaaagcatagagactattatgtaggtagact 319  Q
    || || |||||||||||||||||||||  ||||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagact 18807040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 303
Target Start/End: Complemental strand, 17299088 - 17298907
Alignment:
Q  122 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccc 221  Q
    ||||||| ||||||||||||||| |||||  |||||||||  |||  ||||||||||||| | |||||||||||||||||   ||||||| |||| ||||    
T  17299088 ggcatttatttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccc 17298989  T
Q  222 cattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagact 303  Q
     | |||||  ||||| | |||||| |||||||   ||||| | ||||||||  ||||||||||  ||||||||||| |||||    
T  17298988 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 24695765 - 24695709
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24695765 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 31886537 - 31886640
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||||   |||||| |||||| |||||  ||||||| ||||||| |||    
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactcca 31886636  T
Q  224 ttaa 227  Q
    ||||    
T  31886637 ttaa 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 19714798 - 19714742
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19714798 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 319
Target Start/End: Original strand, 39538708 - 39538789
Alignment:
Q  238 actattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||| ||| ||||  |||| ||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||    
T  39538708 actattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagact 39538789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 19707518 - 19707462
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  19707518 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 27347778 - 27347722
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27347778 tgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 33477479 - 33477390
Alignment:
Q  144 tttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 233  Q
    ||||||||||||||||||||||| || ||||||||| ||| |||||||| |||||||| | |  |||| |||||||| |||||| |||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataa 33477390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 18570156 - 18570108
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||| |||||||| |||||||||| |||||||||||||||| ||||||    
T  18570156 taagctctaatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 39537870 - 39537925
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 81  Q
    ||||||| |||||||||||||||||||||| |||| || |||| |||||| |||||    
T  39537870 tgttggattaagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 11479420 - 11479486
Alignment:
Q  168 tagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccc-cattaaacataa 233  Q
    ||||||| ||||| ||||||||| || ||||||| | |||| |||||||||||| ||||||||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataa 11479486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 19926967 - 19926766
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 19926768  T
Q  318 ct 319  Q
    ||    
T  19926767 ct 19926766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 10621540 - 10621339
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    | |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10621341  T
Q  318 ct 319  Q
    ||    
T  10621340 ct 10621339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 26970463 - 26970664
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26970662  T
Q  318 ct 319  Q
    ||    
T  26970663 ct 26970664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 55612683 - 55612884
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 55612882  T
Q  318 ct 319  Q
    ||    
T  55612883 ct 55612884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 5707320 - 5707521
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5707519  T
Q  318 ct 319  Q
    ||    
T  5707520 ct 5707521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 10628619 - 10628418
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    | |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtaga 10628420  T
Q  318 ct 319  Q
    ||    
T  10628419 ct 10628418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 26963640 - 26963841
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26963839  T
Q  318 ct 319  Q
    ||    
T  26963840 ct 26963841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 28393339 - 28393140
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 28393140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 5713948 - 5714149
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5714147  T
Q  318 ct 319  Q
    ||    
T  5714148 ct 5714149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 868597 - 868798
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    ||||| |||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 868796  T
Q  318 ct 319  Q
    ||    
T  868797 ct 868798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 120 - 319
Target Start/End: Original strand, 18262214 - 18262413
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18262413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 4426808 - 4426610
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| | ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4426708 cccgttaaacataa-ggaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 4426610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 120 - 319
Target Start/End: Original strand, 18269070 - 18269274
Alignment:
Q  120 aaggcatttctttattgatttt-----gttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgt 214  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18269070 aaggcatttctttattgattttgttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 18269169  T
Q  215 gagaccccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggt 314  Q
    |||||||| |||||||||| ||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  18269170 gagaccccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggt 18269269  T
Q  315 agact 319  Q
    |||||    
T  18269270 agact 18269274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 8845215 - 8845401
Alignment:
Q  130 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  230 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtag 316  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtag 8845401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 8858179 - 8858365
Alignment:
Q  130 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  230 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtag 316  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtag 8858365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 118 - 233
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  218 accccattaaacataa 233  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 126 - 317
Target Start/End: Original strand, 20311299 - 20311491
Alignment:
Q  126 tttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaag-tataacttaattgtgagaccccat 224  Q
    ||||||||||||||||||||||||| ||||||||||||| | || |||||||| | |||| |||||| ||||||| ||||||||||||||||||||||||    
T  20311299 tttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccat 20311398  T
Q  225 taaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    ||||||||| || ||| || | ||||||| ||| |||||||||||||| |||||| |||||||||||||||||||||||||| ||| ||||||    
T  20311399 taaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtaga 20311491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 124 - 310
Target Start/End: Complemental strand, 5668327 - 5668140
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||| |||||||| | | ||||| |||||| ||||    
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-ccca 5668229  T
Q  224 ttaaacataatgaaactattctaaaag--tatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 310  Q
    |||||   || || | |||||| ||||  ||| |||||||||||||||||| |||  | |||| ||||||| |||||||||||||||||    
T  5668228 ttaaatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgt 5668140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 124 - 319
Target Start/End: Complemental strand, 10677753 - 10677561
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| ||||||||| ||||||| |||||||||| ||||||| | |||| ||||    
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10677655  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||||||  ||||| | |||||| |||||||| ||||||||||||||  | ||| || |||| |||||||| ||| |||||||||||| ||||||||    
T  10677654 ttaaacgaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagact 10677561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 124 - 319
Target Start/End: Complemental strand, 10891393 - 10891201
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| ||||||||| ||||||| |||||||||| ||||||| | |||| ||||    
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10891295  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||||||  ||||| | |||||| |||||||| ||||||||||||||  | ||| || |||| |||||||| ||| |||||||||||| ||||||||    
T  10891294 ttaaacgaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagact 10891201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 317
Target Start/End: Original strand, 5616215 - 5616414
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||| |||  ||||||||||||| | ||| |||  |||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaa--gctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    ||| ||||||   | || | |||||| |||||||| || |||||  | ||||||  ||| |||||||| | |||||||| |||||||||||||| |||||    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatattaataaagcattgagactattatgtatgtaga 5616414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 124 - 318
Target Start/End: Original strand, 35223576 - 35223760
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| | ||||||| || |           
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaatcgtaa------- 35223668  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 318  Q
       |||  || || | |||||| |||||||  |||||||||||||||||  ||   ||||| |||||||||||| |||||||||||| |||||||    
T  35223669 ---aacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagac 35223760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 19927060 - 19927003
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19927060 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 5713856 - 5713912
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5713856 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 26963548 - 26963604
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26963548 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 26970371 - 26970427
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26970371 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 310
Target Start/End: Complemental strand, 21454319 - 21454152
Alignment:
Q  144 tttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatt-aagtataacttaattgtgagaccccattaaacataatgaaactat 242  Q
    ||||||||||| ||||||||| | ||||||||||||| || ||||||||||||| || | | |||||||  ||||||||||||||  ||||||| | |||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  243 tctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 310  Q
    | | ||| ||||| ||||||| |||||||| ||| || |||| || ||| ||||| ||| ||||||||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgt 21454152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 5707228 - 5707284
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  5707228 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 10621632 - 10621576
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  10621632 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  28 ttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 17142429 - 17142372
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  17142429 atgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 55612594 - 55612650
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  55612594 tgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 4426905 - 4426847
Alignment:
Q  24 aatgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||| || ||||||    
T  4426905 aatgttggagtaagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 28393434 - 28393380
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatca 80  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  28393434 tgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18268976 - 18269032
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||    
T  18268976 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 156 - 317
Target Start/End: Original strand, 56516094 - 56516255
Alignment:
Q  156 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaa-actattctaaaagtatc 254  Q
    ||||||||||| |||||||| | ||  |  ||||| |||||||| | | |||||||||||||||  |||||| ||||  ||| | ||||||  |||||||    
T  56516094 taataaagtccttagaatagatggttagagtaatgaaacattaattgtgacttaattgtgagacttcattaa-catatagaacattattcttgaagtatc 56516192  T
Q  255 tgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    | |||||||||||||||| |||    ||||  |||||| ||||||||||||||||||||||||    
T  56516193 tatagtcaagctttattgtgaataacgatagtattaaaacatagagactattatgtaggtaga 56516255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 39074346 - 39074279
Alignment:
Q  167 ctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataa 233  Q
    |||||||| |||||| |||||| | ||||||||||||| |||||||  ||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataa 39074279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  33 ataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||| | ||||||||||||||| ||||| ||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 11161972 - 11161913
Alignment:
Q  168 tagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaa 227  Q
    ||||||||||| || |||||||||||||  |||| | ||||||||||||||| |||||||    
T  11161972 tagaatagttaatcagtttaatggaacacaaagtgtgacttaattgtgagactccattaa 11161913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 39074269 - 39074218
Alignment:
Q  256 gtagtcaagctttattgagaagtgggatatcattaaagcatagagactatta 307  Q
    |||||||  |||||||| |||||| |||||||||||||||| ||||||||||    
T  39074269 gtagtcatactttattgtgaagtgagatatcattaaagcatggagactatta 39074218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  41 taatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||| |||||| |||| ||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 8845118 - 8845166
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  8845118 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 8858082 - 8858130
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  8858082 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  42 aatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||| |||| |||||||||||||| ||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 18252030 - 18252231
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18252229  T
Q  318 ct 319  Q
    ||    
T  18252230 ct 18252231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 27131616 - 27131415
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 27131417  T
Q  318 ct 319  Q
    ||    
T  27131416 ct 27131415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 18532721 - 18532520
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagataga 18532522  T
Q  318 ct 319  Q
    ||    
T  18532521 ct 18532520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 16359240 - 16359041
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||||||||| |||||| |  |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagact 16359041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 27310782 - 27310583
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    | | || ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagact 27310583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 21171438 - 21171239
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| || ||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 21171239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 124 - 319
Target Start/End: Complemental strand, 36816834 - 36816639
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||     
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccg 36816735  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||| || | |||||| ||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||    
T  36816734 ttaaacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgtggatagact 36816639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 3856126 - 3855925
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| || | |||||| ||| ||| ||||||||| |||||||| |||||||||||| |||||||||| |||||||||| || ||||||    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtaga 3855927  T
Q  318 ct 319  Q
    ||    
T  3855926 ct 3855925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 22657429 - 22657227
Alignment:
Q  118 acaaggcatttctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtga 216  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  217 gaccccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtag 316  Q
    |||||| |||||||||| || || ||||| ||||| ||| |||||||||||||||  ||| || ||||||||||||||||||||||||| |||| | |||    
T  22657329 gacccctttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgtggatag 22657230  T
Q  317 act 319  Q
    |||    
T  22657229 act 22657227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 124 - 318
Target Start/End: Complemental strand, 27277756 - 27277564
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||  ||||| ||| ||||| || | ||||||| | ||||||       
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatta-gtgtgacttaatcgcgagacctt- 27277659  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagac 318  Q
    |||| |  ||||| | |||||| |||||||| ||||||| ||||||||| |||  |||||| ||||||||||||||||||||||||| |||||||    
T  27277658 ttaaccgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagac 27277564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 310
Target Start/End: Complemental strand, 12006712 - 12006554
Alignment:
Q  152 aaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagt 251  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||| |  |||||| |||||||||||| |||||||| || | |||| | |||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  252 atctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 310  Q
    ||  |||||||||| ||| || |||| |||||| ||||||| | |||||| | ||||||    
T  12006612 attcgtagtcaagccttagtgtgaagagggataacattaaaacttagagattgttatgt 12006554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 317
Target Start/End: Complemental strand, 12014457 - 12014292
Alignment:
Q  152 aaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagt 251  Q
    |||||||||||||| ||||||||  ||||| ||||||||||| ||||||| ||| ||||| || ||| |||||||||||||||||   |||||| |||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  252 atctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    ||| ||||| |||||||| || |||| ||||||  |||||||| || |||| ||||||| ||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtaga 12014292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 9918106 - 9917927
Alignment:
Q  130 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 229  Q
    |||||||||||||||||||| ||||||||||||||| ||       ||||| |||||||| |||||||||||||||||| ||   ||||  ||||||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgaga-tccattaaat 9918014  T
Q  230 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtag 316  Q
    |||| || | |||||| ||| ||||| |||| |||||||||||  |||||||||| |||| ||||||||||| || ||||| |||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtag 9917927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 18251935 - 18251992
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18251935 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 18532814 - 18532757
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18532814 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 27310877 - 27310821
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27310877 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 16359336 - 16359280
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||    
T  16359336 tgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 3403248 - 3403325
Alignment:
Q  148 tttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatt 225  Q
    ||||||| ||||||||||  || ||||||||||||| ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 3443571 - 3443494
Alignment:
Q  148 tttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccatt 225  Q
    ||||||| ||||||||||  || ||||||||||||| ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 21171535 - 21171479
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||| |||||||||||||||||| ||||| ||||||||||| ||||||    
T  21171535 tgttggagtaagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 22657521 - 22657472
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||| |||||| ||||||||||| ||||||||||| |||||||||||    
T  22657521 tgttggagtaagccttaatagccaatatatattgattgagtttggctttg 22657472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 30720694 - 30720625
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaa 193  Q
    ||||| ||||||| |||| |||||||| ||||||||||||| ||| ||||| |||||  |||||||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 36816926 - 36816885
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||||||||  ||||||||||||||||||||||||||||    
T  36816926 taagccctaatattcaatctatattgattgggtttggctttg 36816885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 3856220 - 3856164
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| || |||||||||||||||| || ||||||||||||| ||||| ||||||    
T  3856220 tgttggagtaggccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 27131704 - 27131652
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||     ||||||||||||||| ||||||    
T  27131704 tgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 27277856 - 27277800
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||| || |||  ||||| ||||| ||||||    
T  27277856 tgttggagtaagccctaatagccaatctatgttaattatgtttgactttgtatcatg 27277800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 182; Significance: 2e-98; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 6110064 - 6110265
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6110263  T
Q  318 ct 319  Q
    ||    
T  6110264 ct 6110265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 10572799 - 10572598
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10572600  T
Q  318 ct 319  Q
    ||    
T  10572599 ct 10572598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 16482688 - 16482489
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16482489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 124 - 319
Target Start/End: Complemental strand, 17781319 - 17781124
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 17781220  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 17781124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 120 - 319
Target Start/End: Original strand, 18522665 - 18522864
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagact 18522864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 15601091 - 15600890
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15600892  T
Q  318 ct 319  Q
    ||    
T  15600891 ct 15600890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 15607636 - 15607435
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15607437  T
Q  318 ct 319  Q
    ||    
T  15607436 ct 15607435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 118 - 304
Target Start/End: Original strand, 8490488 - 8490674
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagacta 304  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagacta 8490674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 121 - 319
Target Start/End: Original strand, 13211305 - 13211503
Alignment:
Q  121 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacc 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  221 ccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagact 13211503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 13248607 - 13248808
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtaga 13248806  T
Q  318 ct 319  Q
    ||    
T  13248807 ct 13248808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 124 - 319
Target Start/End: Complemental strand, 19089946 - 19089751
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccct 19089847  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19089846 ttaaacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagact 19089751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 15357793 - 15357592
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtaga 15357594  T
Q  318 ct 319  Q
    ||    
T  15357593 ct 15357592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 124 - 319
Target Start/End: Complemental strand, 10579556 - 10579361
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagacccca 10579457  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10579456 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagact 10579361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 120 - 319
Target Start/End: Original strand, 13516813 - 13517012
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagact 13517012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 120 - 319
Target Start/End: Original strand, 18519980 - 18520176
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||||||||| ||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520080 cccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18520176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 17200389 - 17200190
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagact 17200190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 124 - 319
Target Start/End: Complemental strand, 32057101 - 32056906
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||     
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccg 32057002  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||| ||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32057001 ttaaacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 32056906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 137 - 319
Target Start/End: Complemental strand, 15342407 - 15342225
Alignment:
Q  137 attttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatga 236  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  237 aactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    | ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagact 15342225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 118 - 279
Target Start/End: Complemental strand, 18640953 - 18640792
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtg 279  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 124 - 319
Target Start/End: Complemental strand, 1647726 - 1647527
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagta----taacttaattgtgagac 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagac 1647627  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||||||| | |||||||| ||| |||||||||||||||||  ||||||| |||||||||||||||||||||||| | ||||||    
T  1647626 cccgttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgtggatagact 1647527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 118 - 310
Target Start/End: Original strand, 29924971 - 29925163
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||  ||||||||||| |||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 310  Q
    ||||||||||| |||| || | |||||| ||| ||| |||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 118 - 310
Target Start/End: Original strand, 29974124 - 29974316
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||  ||||||||||| |||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 310  Q
    ||||||||||| |||| || | |||||| ||| ||| |||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 120 - 306
Target Start/End: Original strand, 16200128 - 16200313
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| |||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  16200128 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagac 16200226  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 306  Q
    |||||||||||||| || | |||||| |||||||  ||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  16200227 cccattaaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 120 - 306
Target Start/End: Original strand, 16200434 - 16200619
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  16200434 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagac 16200532  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 306  Q
     ||| ||||||||| || | |||||| |||||||  ||||||||| ||||||| |||||||||| ||||||||||||  ||||||||    
T  16200533 tccaataaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 125 - 319
Target Start/End: Complemental strand, 24253589 - 24253394
Alignment:
Q  125 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgaga-cccca 223  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||| | ||  |||| |||||||||||||||| ||||||| |||||| |||||    
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatcccca 24253490  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    | |||||||| || |||||||| ||||||| ||| |||||  |||||||  ||||| | || ||||||||||||||||||||||||| ||||||||    
T  24253489 tcaaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagact 24253394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 17136465 - 17136560
Alignment:
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagact 17136560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 18534758 - 18534819
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtc 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtc 18534819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 6109972 - 6110028
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6109972 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 8490396 - 8490452
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8490396 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 13248515 - 13248571
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13248515 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 13211211 - 13211267
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  13211211 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 18641045 - 18640989
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  18641045 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 10579653 - 10579604
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10579653 tgttggaataagccctaatagccaatctatattgattgggtttgactttg 10579604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 17136137 - 17136193
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  17136137 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 10572890 - 10572841
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  10572890 tgttggaataagccctaatagccaacctatattgattgggtttgactttg 10572841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 15607729 - 15607672
Alignment:
Q  26 tgttggaataagccctaatagccaatctata-ttgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||    
T  15607729 tgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 17200483 - 17200434
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  17200483 tgttggagtaagccctaatagccaatctatgttgattgggtttggctttg 17200434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 15351293 - 15351237
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  15351293 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 15357885 - 15357829
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  15357885 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 16482782 - 16482727
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  16482782 tgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18519885 - 18519941
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| |||| ||||||    
T  18519885 tgttggagtaagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 1647825 - 1647768
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||| ||||||||||||||   ||||||||||||||||||||||||| ||||||    
T  1647825 atgttggagtaagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 15601184 - 15601127
Alignment:
Q  26 tgttggaataagccctaatagccaatctata-ttgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||| || ||||||||||| |||| ||||||    
T  15601184 tgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 13516719 - 13516775
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||||| || ||||||    
T  13516719 tgttggagtaagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 17781414 - 17781370
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttgg 70  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  17781414 tgttggagtaagccctaatagccaatctatattgattgagtttgg 17781370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 19090041 - 19089997
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttgg 70  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  19090041 tgttggagtaagccctaatagccaatctatattgattgagtttgg 19089997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 32057200 - 32057144
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||| ||||| ||||||    
T  32057200 tgttggagtaagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18510829 - 18510885
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||  |||| ||||||    
T  18510829 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18522570 - 18522626
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||  |||| ||||||    
T  18522570 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 18534671 - 18534719
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||| |||||||||||||||| |||||| |||| ||||||    
T  18534671 taagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 29924879 - 29924935
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||| ||||||    
T  29924879 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 29974032 - 29974088
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||| | ||| ||||||    
T  29974032 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29974088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 180; Significance: 3e-97; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 16566525 - 16566326
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16566326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 29308890 - 29309091
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    | |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29309089  T
Q  318 ct 319  Q
    ||    
T  29309090 ct 29309091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 29315850 - 29316051
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    | |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29316049  T
Q  318 ct 319  Q
    ||    
T  29316050 ct 29316051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 17691647 - 17691446
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtaga 17691448  T
Q  318 ct 319  Q
    ||    
T  17691447 ct 17691446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 27381459 - 27381258
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||  ||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27381260  T
Q  318 ct 319  Q
    ||    
T  27381259 ct 27381258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 27471842 - 27471641
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||  ||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27471643  T
Q  318 ct 319  Q
    ||    
T  27471642 ct 27471641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 189182 - 188983
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 188983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 17684674 - 17684475
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 17684475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 120 - 319
Target Start/End: Original strand, 11651725 - 11651924
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 11651924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 25537364 - 25537165
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| ||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagact 25537165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 120 - 308
Target Start/End: Complemental strand, 13359474 - 13359286
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||  | |||||||| |||||||||||||||||| |||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattat 308  Q
     |||||||||||||  | | |||| | |||||||| |||||||| |||||||| ||| ||||| | ||||||||| |||||||||||||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattat 13359286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 310
Target Start/End: Original strand, 8509941 - 8510115
Alignment:
Q  137 attttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgaga-ccccattaaacataatg 235  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||| ||| ||||||||||| |||  |||||||| ||||| |||||||||| || | |    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  236 aaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 310  Q
    |   |||| | ||||||| |||||| ||||||||||  ||| || |||| ||||||| |||| ||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgt 8510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 310
Target Start/End: Original strand, 27925772 - 27925946
Alignment:
Q  141 tgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacat---taagtata--acttaattgtgagaccccattaaacataatg 235  Q
    |||||||||||||||||||||||||| |||||||  |||| ||||||| |||||||   ||||| |   ||||||| ||||||| |||||||||  ||      
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  236 aaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 310  Q
    ||| |||||| ||||||||| ||||||| |||||||  ||||||| ||| |||| ||||| | ||||||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgt 27925946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  28 ttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 27381551 - 27381502
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381551 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 27381502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 27471934 - 27471885
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471934 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 27471885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 29308798 - 29308854
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  29308798 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 29315758 - 29315814
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  29315758 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 157 - 319
Target Start/End: Complemental strand, 20553755 - 20553593
Alignment:
Q  157 aataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagtatctg 256  Q
    ||||||||| |||| |||| ||||| |||||||| || ||||||||  ||||||| |||||| ||||||||| ||||  | | |||||| |||| ||| |    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  257 tagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||| ||  ||||||| |||||| ||||  ||||||||||| ||| | |||||| ||||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagact 20553593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 17684768 - 17684712
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||    
T  17684768 tgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 11651630 - 11651684
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatca 80  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  11651630 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 25537461 - 25537405
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  25537461 tgttggattaagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 319
Target Start/End: Complemental strand, 17850663 - 17850501
Alignment:
Q  156 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagtatct 255  Q
    |||||||||||||| ||||| |||| |||||  |||||||||| |||  |||||||||||| | || |||||| | || || |||||||| ||| ||||     
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  256 gtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
     |||||||||||| ||| |||||   ||| |||| ||| ||| |||||||||| | ||||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagact 17850501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 31258120 - 31258065
Alignment:
Q  125 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 180  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 319
Target Start/End: Complemental strand, 20736773 - 20736609
Alignment:
Q  156 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaa-actattctaaaa-gtat 253  Q
    ||||||||| |||||||||| ||||  || |||||| | ||||||| | |||||||  |||||   |||||| ||||| ||| | |||||| ||| ||||    
T  20736773 taataaagttcctagaatagatagttcgtgtaatggtatattaagtttgacttaatcatgagattacattaa-cataaagaacattattcttaaatgtat 20736675  T
Q  254 ctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||||||||| | |||| |||||||  | |||||| | |||||||||||||| |||||||    
T  20736674 ctgtagtcaagctttaataagaactgggataataataaagcgtcgagactattatgtatgtagact 20736609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 13359560 - 13359512
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||| |||||||||||||||||||| |||||||||| ||||| ||||||    
T  13359560 taagtcctaatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 189282 - 189221
Alignment:
Q  24 aatgttggaataagccctaatagccaatcta---tattgattgggtttggctttgcatcatg 82  Q
    ||||||||| ||||||||||||  |||||||   ||||||||||||||||||||| ||||||    
T  189282 aatgttggagtaagccctaataatcaatctagtatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 28605854 - 28605931
Alignment:
Q  156 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 233  Q
    |||||||||  |||||||||||| | |||||||||| || |||||| | ||| |||||||||||| | ||||| ||||    
T  28605854 taataaagtatctagaatagttattttgtttaatgggactttaagtgtgactaaattgtgagacctcgttaaagataa 28605931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 178; Significance: 5e-96; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 993 - 1194
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 1192  T
Q  318 ct 319  Q
    ||    
T  1193 ct 1194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 900 - 957
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  900 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 178; Significance: 5e-96; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 7141 - 6940
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6942  T
Q  318 ct 319  Q
    ||    
T  6941 ct 6940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 14157 - 13956
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 13958  T
Q  318 ct 319  Q
    ||    
T  13957 ct 13956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 7233 - 7177
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||    
T  7233 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 14249 - 14193
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||    
T  14249 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 178; Significance: 5e-96; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 21940665 - 21940866
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 21940864  T
Q  318 ct 319  Q
    ||    
T  21940865 ct 21940866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 120 - 319
Target Start/End: Original strand, 28554885 - 28555084
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||||||||||||||||||||||| |||||||||||||||| | |||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 28555084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 120 - 319
Target Start/End: Original strand, 22171491 - 22171688
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||||||  ||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagact 22171688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 124 - 317
Target Start/End: Original strand, 6094129 - 6094322
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 6094228  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  6094229 ttaaacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtaga 6094322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 124 - 319
Target Start/End: Original strand, 24642655 - 24642850
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||     
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 24642754  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||||| ||||||||||| |||||||  |||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||    
T  24642755 ttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagact 24642850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 124 - 251
Target Start/End: Original strand, 24636860 - 24636987
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||     
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccg 24636959  T
Q  224 ttaaacataatgaaactattctaaaagt 251  Q
    |||||||||| ||||||||||| |||||    
T  24636960 ttaaacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 319
Target Start/End: Complemental strand, 38232570 - 38232383
Alignment:
Q  130 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagaccccattaaac 229  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||  |   ||| ||||||||||||  ||| || |||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  230 ataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
     |||  | | |||||| ||||||| ||||||||| ||||||||  ||||| ||||   |||||||||| | |||||| ||| ||||||||    
T  38232471 gtaa-aatagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagact 38232383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 309
Target Start/End: Complemental strand, 32873019 - 32872857
Alignment:
Q  148 tttcaaaataataaagtccctagaatagttagtctgttta-atggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattcta 246  Q
    ||||||||||||||||||| || |||||||  ||  |||| || ||||||||||||| |||||||||||||| | |||| || | | ||| | || | |     
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgagatctcattgaaaagagtgacaatactatt 32872920  T
Q  247 aaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatg 309  Q
    ||| ||| |||||| ||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  32872919 aaaatatttgtagttaagatttattgtgaagtgggataacatcaaagcatagagactattatg 32872857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 22070107 - 22070164
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  22070107 atgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 21940573 - 21940629
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  21940573 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 24642556 - 24642605
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24642556 tgttggagtaagccctaatagccaatctatattgattgggtttggctttg 24642605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 6094031 - 6094087
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  6094031 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 22171396 - 22171452
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||    
T  22171396 tgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 28554791 - 28554847
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  28554791 tgttggagtaagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  156 taataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 2375027 - 2375085
Alignment:
Q  139 tttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatt 197  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  ||||||||||||||    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatt 2375085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 319
Target Start/End: Complemental strand, 14984004 - 14983926
Alignment:
Q  240 tattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||| ||||||||| || ||||  ||||||| ||||||||||| |||| ||| |||| ||||||||||| ||||||||    
T  14984004 tattcttaaagtatctataatcaaaatttattgtgaagtgggataacatt-aagaatagggactattatgtgggtagact 14983926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 24636605 - 24636642
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattg 63  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  24636605 tgttggagtaagccataatagccaatctatattgattg 24636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 178; Significance: 5e-96; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 21330455 - 21330254
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtgga 21330256  T
Q  318 ct 319  Q
    ||    
T  21330255 ct 21330254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 18796506 - 18796707
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    |||||| |||| ||| || |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18796506 acaaggaatttatttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18796605  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    ||| | || ||||||| || | |||||| ||| |||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| ||||||    
T  18796606 acctcttttaacataaggatattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtaga 18796705  T
Q  318 ct 319  Q
    ||    
T  18796706 ct 18796707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 120 - 316
Target Start/End: Original strand, 18619807 - 18620002
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||| | |||||||| |||||     
T  18619807 aaggaatttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga- 18619905  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtag 316  Q
    ||||||||||| || || | |||||| ||||||||||| ||||| |||||||| |||  ||||||  ||||||||||| |||||||||||| |||||    
T  18619906 cccattaaacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtag 18620002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 124 - 263
Target Start/End: Complemental strand, 19692737 - 19692598
Alignment:
Q  124 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagacccca 223  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||  | |||||||  ||||| | ||    
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctca 19692638  T
Q  224 ttaaacataatgaaactattctaaaagtatctgtagtcaa 263  Q
    ||||||  || |||| |||||| ||||||||  |||||||    
T  19692637 ttaaactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 310
Target Start/End: Original strand, 20977956 - 20978084
Alignment:
Q  182 tgtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtggg 281  Q
    ||||||||||||||||||| |||| |||||  ||||| ||||||||| |||| |||| |||||| |||  ||| |||||||||||||| || |||||| |    
T  20977956 tgtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgag 20978055  T
Q  282 atatcattaaagcatagagactattatgt 310  Q
    |||||| ||||||||||||||||||||||    
T  20978056 atatcactaaagcatagagactattatgt 20978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 152 - 319
Target Start/End: Original strand, 36270199 - 36270367
Alignment:
Q  152 aaaataataaagtccctagaatagttagtct-gtttaatggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaag 250  Q
    ||||||||||||||||||||||||||||| |  || |||| ||  |||||| | ||||||| |||||||  ||||||||| ||||| |||||||| |||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  251 tatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
     ||| ||| |||||||||| || |||| |||||| |||||||| ||| |||||||| ||| ||||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagact 36270367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 21330550 - 21330493
Alignment:
Q  25 atgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21330550 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 310
Target Start/End: Original strand, 18822115 - 18822275
Alignment:
Q  152 aaaataataaagtccctagaatagttagtctgtttaa-tggaaca-ttaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaa 249  Q
    ||||||||||||||  |||||| ||||||  |||||| ||||| | |||||| |  |||||| ||||||| |||||||||| || || |||||||| |||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  250 gtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 310  Q
      || |||| |||||||||| |  |||||||||||||||||||||| | ||| ||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgt 18822275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 319
Target Start/End: Complemental strand, 18852146 - 18852065
Alignment:
Q  238 actattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    |||||||| ||||||| ||||||| | |||||||| ||||| ||||| |||||||   || |||||||||||| ||||||||    
T  18852146 actattcttaaagtatatgtagtccaactttattgtgaagtaggataacattaaattgtatagactattatgtcggtagact 18852065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 19692829 - 19692773
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||| ||||||||||||| |||| ||| ||||||| |||| ||||||    
T  19692829 tgttggagtaagccttaatagccaatctgtatttattaggtttggttttgtatcatg 19692773  T

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Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 309
Target Start/End: Complemental strand, 36802820 - 36802664
Alignment:
Q  154 aataataaagtccctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataatgaaactattctaaaagta 252  Q
    ||||||||||||| | ||||||||| |  |||||| ||||| ||||| | | |||||||||  |||   ||||||||| ||||| | |||||| |||  |    
T  36802820 aataataaagtcctttgaatagttaattcgtttaaatggaatattaaatgttacttaattgcaagatatcattaaacacaatgacattattcttaaaaca 36802721  T
Q  253 tctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatg 309  Q
    || ||| ||||| || | ||  |||||||||| |||||||||||| ||| |||||||    
T  36802720 tccgtaatcaagattcagtgtaaagtgggataacattaaagcatatagattattatg 36802664  T

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Target: scaffold0220 (Bit Score: 174; Significance: 1e-93; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 18288 - 18489
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18487  T
Q  318 ct 319  Q
    ||    
T  18488 ct 18489  T

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Target: scaffold0220; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18196 - 18252
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18196 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

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Target: scaffold0186 (Bit Score: 162; Significance: 2e-86; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 118 - 319
Target Start/End: Complemental strand, 26197 - 25996
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 217  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  218 accccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 317  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtaga 25998  T
Q  318 ct 319  Q
    ||    
T  25997 ct 25996  T

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Target: scaffold0186; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 26286 - 26231
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcat 81  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  26286 tgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

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Target: scaffold0063 (Bit Score: 160; Significance: 3e-85; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 120 - 319
Target Start/End: Original strand, 5531 - 5730
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 319  Q
    ||| |||||||||| |||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 5730  T

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Target: scaffold0063; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 5444 - 5492
Alignment:
Q  34 taagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  5444 taagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

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Target: scaffold0008 (Bit Score: 138; Significance: 4e-72; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 120 - 301
Target Start/End: Complemental strand, 230545 - 230365
Alignment:
Q  120 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  220 cccattaaacataatgaaactattctaaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagaga 301  Q
    ||| |||||||||| ||||| ||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcatagaga 230365  T

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Target: scaffold0008; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 230640 - 230584
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||| ||||||    
T  230640 tgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

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Target: scaffold0176 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 8510 - 8447
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtc 181  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtc 8447  T

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Target: scaffold0176; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 8602 - 8546
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  8602 tgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

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Target: scaffold0203 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 23825 - 23769
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23825 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

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Target: scaffold0326 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 16523 - 16571
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggcttt 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16523 tgttggaataagccctaatagccaatctatattgattgggtttggcttt 16571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 151
Target Start/End: Original strand, 16615 - 16648
Alignment:
Q  118 acaaggcatttctttattgattttgttttgtttc 151  Q
    |||||||||||||||||||||||||||||| |||    
T  16615 acaaggcatttctttattgattttgttttgnttc 16648  T

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Target: scaffold0705 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 97 - 41
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  97 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

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Target: scaffold0637 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 8944 - 9000
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||    
T  8944 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

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Target: scaffold0767 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 42 - 1
Alignment:
Q  21 accaatgttggaataagccctaatagccaatctatattgatt 62  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  42 accactgttggaataagccctaatagccaatctatattgatt 1  T

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Target: scaffold0565 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 10256 - 10202
Alignment:
Q  28 ttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 82  Q
    ||||| ||||| |||||||||||||||||||||||| ||||| ||||| ||||||    
T  10256 ttggagtaagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

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Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 168
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  137 attttgttttgtttcaaaataataaagtccct 168  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

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Target: scaffold0170 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 5878 - 5927
Alignment:
Q  26 tgttggaataagccctaatagccaatctatattgattgggtttggctttg 75  Q
    ||||||| |||| | ||||||||||||||||||||||| ||||| |||||    
T  5878 tgttggagtaagtcataatagccaatctatattgattgagtttgactttg 5927  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 92194 - 92267
Alignment:
Q  147 gtttcaaaataataaagtccctagaatagttagtctgtttaa-tggaacattaagtataacttaattgtgagac 219  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagac 92267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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