View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1733_low_3 (Length: 427)

Name: NF1733_low_3
Description: NF1733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1733_low_3
NF1733_low_3
[»] chr5 (22 HSPs)
chr5 (18-158)||(13664443-13664583)
chr5 (254-427)||(13664668-13664839)
chr5 (324-375)||(4433845-4433896)
chr5 (324-378)||(4892379-4892433)
chr5 (324-378)||(8145550-8145604)
chr5 (324-378)||(33584163-33584217)
chr5 (324-375)||(2477813-2477864)
chr5 (324-375)||(3521844-3521895)
chr5 (324-375)||(6043349-6043400)
chr5 (327-378)||(22912891-22912942)
chr5 (325-375)||(12614575-12614625)
chr5 (324-378)||(12850979-12851033)
chr5 (324-378)||(14138844-14138898)
chr5 (324-378)||(25398415-25398469)
chr5 (324-378)||(37321627-37321681)
chr5 (324-378)||(38899560-38899614)
chr5 (341-378)||(17545673-17545710)
chr5 (324-378)||(11360965-11361019)
chr5 (341-378)||(3521994-3522031)
chr5 (341-378)||(6043499-6043536)
chr5 (341-378)||(8145415-8145452)
chr5 (341-378)||(22913042-22913079)
[»] chr1 (27 HSPs)
chr1 (352-420)||(51622026-51622094)
chr1 (319-378)||(44690856-44690915)
chr1 (320-385)||(52329448-52329513)
chr1 (324-378)||(9910125-9910179)
chr1 (324-378)||(19015581-19015635)
chr1 (324-378)||(40215165-40215219)
chr1 (324-378)||(51737682-51737736)
chr1 (327-378)||(32000100-32000151)
chr1 (327-378)||(33786465-33786516)
chr1 (327-378)||(40273888-40273939)
chr1 (324-378)||(6883664-6883718)
chr1 (328-378)||(20304964-20305014)
chr1 (324-378)||(36966542-36966596)
chr1 (324-378)||(37821668-37821722)
chr1 (324-378)||(41876276-41876330)
chr1 (324-376)||(25463853-25463905)
chr1 (324-376)||(44094874-44094926)
chr1 (324-359)||(10167576-10167611)
chr1 (324-375)||(18404625-18404676)
chr1 (325-384)||(22157366-22157425)
chr1 (254-285)||(27523213-27523244)
chr1 (341-375)||(18404485-18404519)
chr1 (324-378)||(25973584-25973638)
chr1 (341-378)||(6883527-6883564)
chr1 (341-378)||(16045786-16045823)
chr1 (341-378)||(40215028-40215065)
chr1 (341-378)||(44094738-44094775)
[»] chr6 (19 HSPs)
chr6 (324-378)||(17175855-17175909)
chr6 (325-372)||(8515567-8515614)
chr6 (324-378)||(18889478-18889532)
chr6 (325-378)||(2309257-2309310)
chr6 (326-375)||(29693624-29693673)
chr6 (319-375)||(6031577-6031633)
chr6 (327-378)||(11548423-11548474)
chr6 (324-375)||(33696874-33696925)
chr6 (325-378)||(28675326-28675379)
chr6 (324-376)||(6127454-6127506)
chr6 (324-376)||(18365410-18365462)
chr6 (324-376)||(18370674-18370726)
chr6 (254-285)||(8515684-8515715)
chr6 (324-378)||(23290915-23290969)
chr6 (324-378)||(32702382-32702436)
chr6 (341-378)||(11548576-11548613)
chr6 (325-378)||(17705303-17705355)
chr6 (341-378)||(33695315-33695352)
chr6 (341-378)||(33696736-33696773)
[»] chr3 (30 HSPs)
chr3 (324-378)||(37216887-37216941)
chr3 (324-378)||(3137248-3137302)
chr3 (324-378)||(8320416-8320470)
chr3 (324-378)||(30385577-30385631)
chr3 (324-378)||(34482722-34482776)
chr3 (325-378)||(24343727-24343780)
chr3 (325-378)||(33145890-33145943)
chr3 (324-376)||(6042054-6042106)
chr3 (324-375)||(3089596-3089647)
chr3 (324-375)||(37522230-37522281)
chr3 (327-378)||(40328011-40328062)
chr3 (324-378)||(22426179-22426233)
chr3 (324-378)||(33113971-33114025)
chr3 (328-378)||(41883056-41883106)
chr3 (324-378)||(46919071-46919125)
chr3 (341-378)||(9797017-9797054)
chr3 (325-378)||(26612924-26612977)
chr3 (325-378)||(36864867-36864920)
chr3 (325-378)||(47738289-47738342)
chr3 (324-376)||(19650736-19650788)
chr3 (324-375)||(2754896-2754947)
chr3 (327-378)||(8361873-8361924)
chr3 (254-285)||(41883181-41883212)
chr3 (341-375)||(19650888-19650922)
chr3 (341-378)||(8362033-8362070)
chr3 (325-378)||(33839713-33839766)
chr3 (341-378)||(34482898-34482935)
chr3 (324-376)||(3574362-3574414)
chr3 (325-377)||(42298040-42298092)
chr3 (324-376)||(48161083-48161135)
[»] chr7 (22 HSPs)
chr7 (325-378)||(42696261-42696314)
chr7 (324-375)||(42611988-42612039)
chr7 (324-378)||(24395148-24395202)
chr7 (324-378)||(45637888-45637942)
chr7 (325-378)||(4974569-4974622)
chr7 (324-376)||(3962155-3962207)
chr7 (324-378)||(15329451-15329505)
chr7 (324-378)||(30848746-30848800)
chr7 (324-378)||(34483015-34483069)
chr7 (341-378)||(15238422-15238459)
chr7 (319-376)||(15577683-15577740)
chr7 (327-375)||(18037157-18037205)
chr7 (324-372)||(35876421-35876469)
chr7 (335-378)||(25167690-25167733)
chr7 (341-375)||(29737182-29737216)
chr7 (324-378)||(35445574-35445628)
chr7 (324-378)||(48880761-48880815)
chr7 (341-378)||(4974723-4974760)
chr7 (341-378)||(35444598-35444635)
chr7 (327-372)||(37476920-37476965)
chr7 (341-378)||(42611851-42611888)
chr7 (341-378)||(45637752-45637789)
[»] chr4 (32 HSPs)
chr4 (324-376)||(33530520-33530572)
chr4 (326-378)||(47290245-47290297)
chr4 (324-378)||(36073526-36073580)
chr4 (324-378)||(46442021-46442075)
chr4 (324-378)||(49387721-49387775)
chr4 (324-376)||(22199436-22199488)
chr4 (327-378)||(10442621-10442672)
chr4 (324-375)||(44893050-44893101)
chr4 (324-375)||(44893603-44893654)
chr4 (324-378)||(9089047-9089101)
chr4 (324-378)||(21802154-21802208)
chr4 (324-378)||(36073128-36073182)
chr4 (325-375)||(37219809-37219859)
chr4 (324-378)||(53123208-53123262)
chr4 (325-378)||(30563387-30563440)
chr4 (324-375)||(4751624-4751675)
chr4 (324-378)||(2625014-2625068)
chr4 (324-378)||(7744946-7745000)
chr4 (324-378)||(31078653-31078707)
chr4 (324-378)||(50156413-50156466)
chr4 (341-378)||(9088910-9088947)
chr4 (341-378)||(10442777-10442814)
chr4 (341-378)||(17655470-17655507)
chr4 (341-378)||(21802310-21802347)
chr4 (341-378)||(31078807-31078844)
chr4 (341-378)||(33530676-33530713)
chr4 (341-378)||(44893201-44893238)
chr4 (341-378)||(44893466-44893503)
chr4 (341-378)||(47290106-47290143)
chr4 (341-378)||(49387876-49387913)
chr4 (341-378)||(53123071-53123108)
chr4 (341-377)||(37934929-37934965)
[»] chr2 (24 HSPs)
chr2 (320-388)||(40262560-40262628)
chr2 (327-378)||(43331092-43331143)
chr2 (324-378)||(33380384-33380438)
chr2 (324-378)||(35160936-35160990)
chr2 (327-375)||(9723586-9723634)
chr2 (324-375)||(23267899-23267950)
chr2 (327-378)||(34320991-34321042)
chr2 (324-378)||(9293409-9293463)
chr2 (324-378)||(10662065-10662119)
chr2 (324-376)||(13355025-13355077)
chr2 (324-376)||(21936259-21936311)
chr2 (254-285)||(9723481-9723512)
chr2 (324-378)||(7475342-7475396)
chr2 (341-375)||(21393676-21393710)
chr2 (341-378)||(7475496-7475533)
chr2 (341-378)||(9293564-9293601)
chr2 (341-378)||(14941354-14941391)
chr2 (325-378)||(16767296-16767349)
chr2 (341-378)||(23268050-23268087)
chr2 (341-378)||(31174822-31174859)
chr2 (341-378)||(43330952-43330989)
chr2 (324-376)||(3989253-3989305)
chr2 (325-377)||(14941199-14941251)
chr2 (325-378)||(22592888-22592943)
[»] chr8 (32 HSPs)
chr8 (324-375)||(42754879-42754930)
chr8 (324-378)||(1503677-1503731)
chr8 (324-378)||(8454010-8454064)
chr8 (324-378)||(14129036-14129090)
chr8 (324-378)||(17841684-17841738)
chr8 (324-378)||(26041947-26042001)
chr8 (324-378)||(40779963-40780017)
chr8 (325-378)||(3890449-3890502)
chr8 (325-378)||(20091635-20091688)
chr8 (325-378)||(34665559-34665612)
chr8 (324-376)||(1645800-1645852)
chr8 (324-376)||(24211208-24211260)
chr8 (324-378)||(6108067-6108121)
chr8 (324-378)||(10044525-10044579)
chr8 (324-378)||(37985890-37985944)
chr8 (329-378)||(31347610-31347659)
chr8 (325-378)||(37132515-37132568)
chr8 (325-378)||(41819602-41819655)
chr8 (324-376)||(15187737-15187789)
chr8 (324-375)||(3596878-3596929)
chr8 (254-285)||(24844817-24844848)
chr8 (324-375)||(32064923-32064974)
chr8 (324-378)||(25581073-25581127)
chr8 (341-378)||(17841838-17841875)
chr8 (341-378)||(20091789-20091826)
chr8 (325-378)||(30055694-30055747)
chr8 (341-378)||(31347770-31347807)
chr8 (341-378)||(32064785-32064822)
chr8 (341-378)||(34665422-34665459)
chr8 (341-378)||(39772789-39772826)
chr8 (341-378)||(40780117-40780154)
chr8 (341-378)||(42755030-42755067)
[»] scaffold0228 (5 HSPs)
scaffold0228 (324-378)||(26113-26167)
scaffold0228 (324-378)||(16161-16215)
scaffold0228 (341-378)||(8442-8479)
scaffold0228 (341-378)||(16024-16061)
scaffold0228 (341-378)||(25976-26013)
[»] scaffold0096 (2 HSPs)
scaffold0096 (324-376)||(41187-41239)
scaffold0096 (341-378)||(41051-41088)
[»] scaffold0178 (1 HSPs)
scaffold0178 (324-375)||(11798-11849)
[»] scaffold0204 (1 HSPs)
scaffold0204 (324-375)||(4573-4624)
[»] scaffold0085 (2 HSPs)
scaffold0085 (324-378)||(48026-48080)
scaffold0085 (341-378)||(47890-47927)


Alignment Details
Target: chr5 (Bit Score: 129; Significance: 1e-66; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 13664443 - 13664583
Alignment:
Q  18 taaaatgagtgtgatttcacccaaaaaagagagcatgttacacaaatattctagtcttcatgtaactttcccgaaggattgtaggataatagcaaaatct 117  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  13664443 taaaatgggtgtgatttcacccaaaaaagagagcatgttacacaaatattctagtcttcatgtaactttccggaacgattgtaggataatagcaaaatct 13664542  T
Q  118 aggtctgaaacaaagtgcgattgttgattgtcaatagctat 158  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13664543 aggtctgaaacaaagtgcgattgttgattgtcaatagctat 13664583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 254 - 427
Target Start/End: Original strand, 13664668 - 13664839
Alignment:
Q  254 tttatcaagaaattgtcccgaaattaatgttattatttaagggcgttatgtannnnnnnnatataaaaacattaataaataagactgaaatctaatggtg 353  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||         ||||||| |||||||||||||||||||||||||| ||||    
T  13664668 tttatcaagaaattgttccgaaattaatgttattatttaagggtgttatgtatttttttt-tataaaa-cattaataaataagactgaaatctaagggtg 13664765  T
Q  354 attattctaccatgtcattcttgaacccatcgtgattttaaattcgctatacatagcattatgcttagtattat 427  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13664766 attattctatcatgtcattcttgaatccatcgtgattttaaattcgctatacatagcattatgcttagtattat 13664839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 4433896 - 4433845
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    ||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  4433896 attaataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 4892379 - 4892433
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  4892379 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 4892433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 8145550 - 8145604
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  8145550 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 8145604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 33584217 - 33584163
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  33584217 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 33584163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 2477813 - 2477864
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    ||||||||||||||||||||||||| |||||| ||| | |||||||||||||    
T  2477813 attaataaataagactgaaatctaaaggtgatcattgtgccatgtcattctt 2477864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 3521895 - 3521844
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| |||||||||||||| |||||||||| | |||||||||||||    
T  3521895 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 3521844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 6043400 - 6043349
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| |||||||||||||| |||||||||| | |||||||||||||    
T  6043400 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 6043349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 378
Target Start/End: Complemental strand, 22912942 - 22912891
Alignment:
Q  327 aataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 22912891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 375
Target Start/End: Complemental strand, 12614625 - 12614575
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    ||||||||| |||||||||||||| |||||||||| | |||||||||||||    
T  12614625 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 12614575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 12850979 - 12851033
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||| ||||| | ||||||||||||||||    
T  12850979 attaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaa 12851033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 14138844 - 14138898
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| ||| |||||||||| |||||||||| | ||||||||||||||||    
T  14138844 attaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaa 14138898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 25398415 - 25398469
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | |||||||||| |||||    
T  25398415 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaa 25398469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 37321681 - 37321627
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | |||| |||||||||||    
T  37321681 attaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaa 37321627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 38899614 - 38899560
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||| ||||| | ||||||||||||||||    
T  38899614 attaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaa 38899560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 17545673 - 17545710
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaa 17545710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 11361019 - 11360965
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| ||| |||||||||| | |||||||| | ||||||||||||||||    
T  11361019 attaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaa 11360965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 3521994 - 3522031
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  3521994 aaatctaatggtgattattctgccatgtcatttttgaa 3522031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 6043499 - 6043536
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaa 6043536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 8145452 - 8145415
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaa 8145415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 22913042 - 22913079
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaa 22913079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 51622026 - 51622094
Alignment:
Q  352 tgattattctaccatgtcattcttgaacccatcgtgattttaaattcgctatacatagcattatgctta 420  Q
    |||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  51622026 tgattattctgccatgtcattcttgaatccatcgtgattttacattcgctatacatagcattatgctta 51622094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 319 - 378
Target Start/End: Complemental strand, 44690915 - 44690856
Alignment:
Q  319 aaaacattaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||| ||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  44690915 aaaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaa 44690856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 385
Target Start/End: Original strand, 52329448 - 52329513
Alignment:
Q  320 aaacattaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaacccatcg 385  Q
    |||| ||||||| |||||||||||||||| |||||||||||| | |||||||||||||| ||||||    
T  52329448 aaacgttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaatccatcg 52329513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 9910179 - 9910125
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||||||| ||||||||||| |||||||||| | ||||||||||||||||    
T  9910179 attaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaa 9910125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 19015581 - 19015635
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  19015581 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 19015635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 40215165 - 40215219
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  40215165 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 40215219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 51737682 - 51737736
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  51737682 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 51737736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 378
Target Start/End: Complemental strand, 32000151 - 32000100
Alignment:
Q  327 aataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 32000100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 378
Target Start/End: Complemental strand, 33786516 - 33786465
Alignment:
Q  327 aataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 33786465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 378
Target Start/End: Original strand, 40273888 - 40273939
Alignment:
Q  327 aataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 40273939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 6883664 - 6883718
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| ||||| |||| | ||||||||||||||||    
T  6883664 attaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaa 6883718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 20305014 - 20304964
Alignment:
Q  328 ataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  20305014 ataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 20304964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 36966596 - 36966542
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | |||||| |||||||||    
T  36966596 attaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaa 36966542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 37821722 - 37821668
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| |  |||||||||||||||    
T  37821722 attaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaa 37821668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 41876330 - 41876276
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | | ||||||||||||||    
T  41876330 attaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaa 41876276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 25463853 - 25463905
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| ||||| |||||||| |||||||||| | ||||||||||||||    
T  25463853 attaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttg 25463905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 44094874 - 44094926
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| |||||||||||||| |||||||||| |  |||||||||||||    
T  44094874 attaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttg 44094926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Original strand, 10167576 - 10167611
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattatt 359  Q
    ||||||||||||||||||||||||| ||||||||||    
T  10167576 attaataaataagactgaaatctaaaggtgattatt 10167611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 18404625 - 18404676
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| ||||||||||||||  ||||||||| | |||||||||||||    
T  18404625 attaataaatgagactgaaatctaaatgtgattattgtgccatgtcattctt 18404676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 384
Target Start/End: Complemental strand, 22157425 - 22157366
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaacccatc 384  Q
    ||||||||||||| |||||| |||  ||||||||||| ||||||||||||| || |||||    
T  22157425 ttaataaataagattgaaatttaagtgtgattattctcccatgtcattcttaaatccatc 22157366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 285
Target Start/End: Complemental strand, 27523244 - 27523213
Alignment:
Q  254 tttatcaagaaattgtcccgaaattaatgtta 285  Q
    ||||||||||||||||||||||||||||||||    
T  27523244 tttatcaagaaattgtcccgaaattaatgtta 27523213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Complemental strand, 18404519 - 18404485
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||| ||||||||||||||||||||||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattctt 18404485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 25973584 - 25973638
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||| ||| |||||||||| |  |||||||||||||||    
T  25973584 attaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaa 25973638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 6883564 - 6883527
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaa 6883527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 16045786 - 16045823
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaa 16045823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 40215065 - 40215028
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaa 40215028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 44094775 - 44094738
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaa 44094738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 17175909 - 17175855
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  17175909 attaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaa 17175855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 372
Target Start/End: Complemental strand, 8515614 - 8515567
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcatt 372  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  8515614 ttaataaataagactgaaatctaagagtgattattctaccatgtcatt 8515567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 18889532 - 18889478
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  18889532 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 18889478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 2309310 - 2309257
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  2309310 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 2309257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 29693624 - 29693673
Alignment:
Q  326 taataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  29693624 taataaataagactgaaatctaagggtcattattctgccatgtcattctt 29693673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 6031633 - 6031577
Alignment:
Q  319 aaaacattaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||| |||||||||| |||||||||||||| |||||||||| | |||||||||||||    
T  6031633 aaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 6031577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 378
Target Start/End: Complemental strand, 11548474 - 11548423
Alignment:
Q  327 aataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 11548423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 33696874 - 33696925
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| |||||||||||||| |||||||||| | |||||||||||||    
T  33696874 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 33696925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 28675326 - 28675379
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||| |||||||||||||| |||||||||| |  |||||||||||||||    
T  28675326 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaa 28675379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 6127454 - 6127506
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| ||||||||||||||  ||||||||| | ||||||||||||||    
T  6127454 attaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 18365462 - 18365410
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| |||||||||||||| |||||||||| | | ||||||||||||    
T  18365462 attaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttg 18365410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 18370726 - 18370674
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| |||||||||||||| |||||||||| | | ||||||||||||    
T  18370726 attaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttg 18370674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 285
Target Start/End: Complemental strand, 8515715 - 8515684
Alignment:
Q  254 tttatcaagaaattgtcccgaaattaatgtta 285  Q
    ||||||||||||||||||||||||||||||||    
T  8515715 tttatcaagaaattgtcccgaaattaatgtta 8515684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 23290969 - 23290915
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| ||| |||||| | |||| |||||||||||    
T  23290969 attaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaa 23290915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 32702382 - 32702436
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| ||| |||||| |  |||||||||||||||    
T  32702382 attaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaa 32702436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 11548576 - 11548613
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaa 11548613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 17705355 - 17705303
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||| |||||||||||||| |||||||||| |  |||||||||||||||    
T  17705355 ttaataaatgagactgaaatctaa-ggtgattattgtgtcatgtcattcttgaa 17705303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 33695315 - 33695352
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaa 33695352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 33696773 - 33696736
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaa 33696736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 37216941 - 37216887
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  37216941 attaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaa 37216887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 3137302 - 3137248
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  3137302 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 3137248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 8320470 - 8320416
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  8320470 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 8320416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 30385577 - 30385631
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  30385577 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 30385631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 34482776 - 34482722
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  34482776 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 34482722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 24343727 - 24343780
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||||||||||||||||| |||||||||  || |||||||||||||||    
T  24343727 ttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaa 24343780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 33145890 - 33145943
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||||||||||||||||| |||||||||| |  |||||||||||||||    
T  33145890 ttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaa 33145943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 6042054 - 6042106
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||    
T  6042054 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 6042106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 3089596 - 3089647
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| |||||||||||||| |||||||||| | |||||||||||||    
T  3089596 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 3089647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 37522230 - 37522281
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| |||||||||||||| |||||||||| | |||||||||||||    
T  37522230 attaataaatgagactgaaatctaaaggtgattattatgccatgtcattctt 37522281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 378
Target Start/End: Original strand, 40328011 - 40328062
Alignment:
Q  327 aataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||||||||||||||| |||||||||| |  |||||||||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaa 40328062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 22426233 - 22426179
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| ||||||||||||||  ||||||||| | ||||||||||||||||    
T  22426233 attaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaa 22426179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 33113971 - 33114025
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| ||| |||||||||| |||||||||| | ||||||||||||||||    
T  33113971 attaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaa 33114025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 41883106 - 41883056
Alignment:
Q  328 ataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||||||||||| || | |||||||| ||||||||||||||||||    
T  41883106 ataaataagactgaaatccaaagatgattattttaccatgtcattcttgaa 41883056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 46919071 - 46919125
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||||||||| ||||||||  |||||||||||| |||||||||| |||||    
T  46919071 attaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaa 46919125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 9797017 - 9797054
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaa 9797054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 26612924 - 26612977
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||| |||||||||||||| |||||||||| | |||||| |||||||||    
T  26612924 ttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaa 26612977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 36864920 - 36864867
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||| |||||||||||||| |||||||||| |  |||||||||||||||    
T  36864920 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaa 36864867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 47738289 - 47738342
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||| |||||||||||||| | |||||||| | ||||||||||||||||    
T  47738289 ttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaa 47738342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 19650788 - 19650736
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| |||||||||||||| |||||||||| |  |||||||||||||    
T  19650788 attaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttg 19650736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 2754896 - 2754947
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| |||||||||| ||| |||||||||| | |||||||||||||    
T  2754896 attaataaatgagactgaaatttaaaggtgattattgtgccatgtcattctt 2754947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 378
Target Start/End: Complemental strand, 8361924 - 8361873
Alignment:
Q  327 aataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||| |||||||||||||| |||||||||| |  |||||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaa 8361873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 285
Target Start/End: Complemental strand, 41883212 - 41883181
Alignment:
Q  254 tttatcaagaaattgtcccgaaattaatgtta 285  Q
    ||||||||||||||||||||||||||||||||    
T  41883212 tttatcaagaaattgtcccgaaattaatgtta 41883181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Original strand, 19650888 - 19650922
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattctt 375  Q
    ||||||||||||||||||||| |||||||||||||    
T  19650888 aaatctaatggtgattattctgccatgtcattctt 19650922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 8362033 - 8362070
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaa 8362070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 33839713 - 33839766
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||| |||||||||| ||| |||||||||| |  |||||||||||||||    
T  33839713 ttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaa 33839766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 34482898 - 34482935
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  34482898 aaatctaagggtgattattctaccatatcattcttgaa 34482935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 3574414 - 3574362
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| |||||||||||||  |||||||||| |  |||||||||||||    
T  3574414 attaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttg 3574362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 42298040 - 42298092
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttga 377  Q
    ||||||||| |||||||||||||| |||| ||||| |  ||||||||||||||    
T  42298040 ttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattcttga 42298092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 48161083 - 48161135
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| |||||||||||||| |||||||||| |  |||||| ||||||    
T  48161083 attaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttg 48161135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 42696261 - 42696314
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  42696261 ttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaa 42696314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 42611988 - 42612039
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    ||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  42611988 attaataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 42612039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 24395148 - 24395202
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  24395148 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 24395202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 45637888 - 45637942
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  45637888 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 45637942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 4974622 - 4974569
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  4974622 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 4974569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 3962155 - 3962207
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||    
T  3962155 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 3962207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 15329451 - 15329505
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| ||||||||||||||  ||||||||| | ||||||||||||||||    
T  15329451 attaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaa 15329505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 30848746 - 30848800
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||| ||| |||||||||| | ||||||||||||||||    
T  30848746 attaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaa 30848800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 34483015 - 34483069
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| ||| |||||||||| |||||||||| | ||||||||||||||||    
T  34483015 attaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaa 34483069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 15238459 - 15238422
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaa 15238422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 15577740 - 15577683
Alignment:
Q  319 aaaacattaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||| |||||||||| |||||||||||||| |||||||||| |  |||||||||||||    
T  15577740 aaaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttg 15577683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 375
Target Start/End: Original strand, 18037157 - 18037205
Alignment:
Q  327 aataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||  ||||||||||||| |||||||||| |||||||||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattctt 18037205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 35876421 - 35876469
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcatt 372  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||    
T  35876421 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 35876469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 378
Target Start/End: Complemental strand, 25167733 - 25167690
Alignment:
Q  335 agactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||||||| |||||||||| | ||||||||||||||||    
T  25167733 agactgaaatctaaaggtgattattgtgccatgtcattcttgaa 25167690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Complemental strand, 29737216 - 29737182
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||| ||||||||||||||||||||||||||    
T  29737216 aaatctaagggtgattattctaccatgtcattctt 29737182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 35445574 - 35445628
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| |  ||| |||||||||||    
T  35445574 attaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaa 35445628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 48880815 - 48880761
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| | ||||||||||||  ||||||||| | ||||||||||||||||    
T  48880815 attaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaa 48880761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 4974723 - 4974760
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaa 4974760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 35444635 - 35444598
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaa 35444598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 37476965 - 37476920
Alignment:
Q  327 aataaataagactgaaatctaatggtgattattctaccatgtcatt 372  Q
    ||||||| |||||||||||||| |||||||||| | ||||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcatt 37476920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 42611888 - 42611851
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaa 42611851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 45637789 - 45637752
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaa 45637752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 33530572 - 33530520
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    ||||||||||||||||||||||||| |||||||||| | ||||||||||||||    
T  33530572 attaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttg 33530520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 378
Target Start/End: Original strand, 47290245 - 47290297
Alignment:
Q  326 taataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  47290245 taataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaa 47290297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 36073526 - 36073580
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  36073526 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 36073580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 46442021 - 46442075
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  46442021 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 46442075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 49387775 - 49387721
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  49387775 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 49387721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 22199436 - 22199488
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||    
T  22199436 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 22199488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 378
Target Start/End: Complemental strand, 10442672 - 10442621
Alignment:
Q  327 aataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  10442672 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 10442621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 44893101 - 44893050
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| |||||||||||||| |||||||||| | |||||||||||||    
T  44893101 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 44893050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 44893603 - 44893654
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| |||||||||||||| |||||||||| | |||||||||||||    
T  44893603 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 44893654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 9089047 - 9089101
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| | |||||||| | ||||||||||||||||    
T  9089047 attaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaa 9089101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 21802208 - 21802154
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| |  |||||||||||||||    
T  21802208 attaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaa 21802154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 36073128 - 36073182
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||| ||||| | ||||||||||||||||    
T  36073128 attaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaa 36073182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 375
Target Start/End: Original strand, 37219809 - 37219859
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    ||||||||||||| |||||||||| | |||||||||| |||||||||||||    
T  37219809 ttaataaataagattgaaatctaaggatgattattctgccatgtcattctt 37219859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 53123208 - 53123262
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| | |||||||| | ||||||||||||||||    
T  53123208 attaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaa 53123262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 30563387 - 30563440
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||||||||||||||||||  ||||||||| |  |||||||||||||||    
T  30563387 ttaataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaa 30563440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 4751624 - 4751675
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| |||||||||||||| |||| ||||| | |||||||||||||    
T  4751624 attaataaatgagactgaaatctaaaggtggttattgtgccatgtcattctt 4751675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 2625014 - 2625068
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | | |||||||| |||||    
T  2625014 attaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaa 2625068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 7745000 - 7744946
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| ||| |||||||||| |||||||||| | | ||||||||||||||    
T  7745000 attaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaa 7744946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 31078707 - 31078653
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| ||| |||||||||| | |||||||| | ||||||||||||||||    
T  31078707 attaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaa 31078653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 50156466 - 50156413
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| |  |||||||||||||||    
T  50156466 attaataaatgagactgaaatctaa-ggtgattattatgtcatgtcattcttgaa 50156413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 9088947 - 9088910
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  9088947 aaatctaagggtgattattctgccatgtcattcttgaa 9088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 10442777 - 10442814
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaa 10442814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 17655507 - 17655470
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  17655507 aaatctaagggtgattattctgccatgtcattcttgaa 17655470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 21802310 - 21802347
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaa 21802347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 31078807 - 31078844
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaa 31078844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 33530676 - 33530713
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaa 33530713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 44893201 - 44893238
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  44893201 aaatctaagggtgattattctgccatgtcattcttgaa 44893238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 44893503 - 44893466
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaa 44893466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 47290143 - 47290106
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaa 47290106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 49387876 - 49387913
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaa 49387913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 53123108 - 53123071
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaa 53123071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 377
Target Start/End: Original strand, 37934929 - 37934965
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttga 377  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  37934929 aaatctaagggtgagtattctaccatgtcattcttga 37934965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 320 - 388
Target Start/End: Complemental strand, 40262628 - 40262560
Alignment:
Q  320 aaacattaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaacccatcgtga 388  Q
    |||| |||| |||||| ||||||||||||  || ||||||||||||||||||||||||| |||||||||    
T  40262628 aaacgttaacaaataaaactgaaatctaagagttattattctaccatgtcattcttgaatccatcgtga 40262560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 378
Target Start/End: Original strand, 43331092 - 43331143
Alignment:
Q  327 aataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaa 43331143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 33380384 - 33380438
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  33380384 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 33380438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 35160936 - 35160990
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  35160936 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 35160990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 375
Target Start/End: Original strand, 9723586 - 9723634
Alignment:
Q  327 aataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattctt 9723634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 23267950 - 23267899
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| |||||||||||||| |||||||||| | |||||||||||||    
T  23267950 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 23267899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 378
Target Start/End: Complemental strand, 34321042 - 34320991
Alignment:
Q  327 aataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 34320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 9293463 - 9293409
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| |  |||||||||||||||    
T  9293463 attaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaa 9293409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 10662065 - 10662119
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| |  |||||||||||||||    
T  10662065 attaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaa 10662119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 13355025 - 13355077
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| ||||||||||||||  ||||||||| | ||||||||||||||    
T  13355025 attaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 13355077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 21936259 - 21936311
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| | |||||||||||| |||||||||| | ||||||||||||||    
T  21936259 attaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttg 21936311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 285
Target Start/End: Original strand, 9723481 - 9723512
Alignment:
Q  254 tttatcaagaaattgtcccgaaattaatgtta 285  Q
    ||||||||||||||||||||||||||||||||    
T  9723481 tttatcaagaaattgtcccgaaattaatgtta 9723512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 7475396 - 7475342
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| |  ||| |||||||||||    
T  7475396 attaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaa 7475342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 375
Target Start/End: Original strand, 21393676 - 21393710
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||| ||||||||||||||||||||||||||    
T  21393676 aaatctaagggtgattattctaccatgtcattctt 21393710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 7475496 - 7475533
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  7475496 aaatctaagggtgattattctatcatgtcattcttgaa 7475533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 9293564 - 9293601
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaa 9293601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 14941354 - 14941391
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaa 14941391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 16767349 - 16767296
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||| ||||||||||||||  ||||||||| |  |||||||||||||||    
T  16767349 ttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaa 16767296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 23268050 - 23268087
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaa 23268087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 31174822 - 31174859
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaa 31174859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 43330989 - 43330952
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaa 43330952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 3989253 - 3989305
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| |||||||||||||| ||| |||||| |  |||||||||||||    
T  3989253 attaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttg 3989305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 14941251 - 14941199
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttga 377  Q
    ||||||||||||| |||||||||| | |||||||| |  ||||||||||||||    
T  14941251 ttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 22592888 - 22592943
Alignment:
Q  325 ttaataaataagactgaaa--tctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||||||||||||  ||||| |||||||||| |  |||||||||||||||    
T  22592888 ttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaa 22592943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 42754930 - 42754879
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  42754930 attaataaatgagactgaaatctaaaggtgattattgtaccatgtcattctt 42754879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 1503731 - 1503677
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  1503731 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 1503677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 8454010 - 8454064
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  8454010 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 8454064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 14129036 - 14129090
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  14129036 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 14129090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 17841738 - 17841684
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  17841738 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 17841684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 26042001 - 26041947
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  26042001 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 26041947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 40780017 - 40779963
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  40780017 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 40779963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 3890502 - 3890449
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||||||| | ||||||||||||||||||||| |||| |||||||||||    
T  3890502 ttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaa 3890449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 20091688 - 20091635
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  20091688 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 20091635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 34665559 - 34665612
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  34665559 ttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 34665612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 1645852 - 1645800
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||    
T  1645852 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 1645800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 24211260 - 24211208
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||    
T  24211260 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttg 24211208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 6108121 - 6108067
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| |  |||||||||||||||    
T  6108121 attaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaa 6108067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 10044525 - 10044579
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| ||| |||||||||| |||||||||| | ||||||||||||||||    
T  10044525 attaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaa 10044579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 37985944 - 37985890
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||||  ||||||||||||| |||||||||| | ||||||||||||||||    
T  37985944 attaataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaa 37985890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 31347659 - 31347610
Alignment:
Q  329 taaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 31347610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 37132568 - 37132515
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||||||||||||||||| |||||||||| |  |||||||||| ||||    
T  37132568 ttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaa 37132515  T

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Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 41819655 - 41819602
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||| |||||||||||||| |||||||||| |  |||||||||||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaa 41819602  T

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Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 15187737 - 15187789
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| |||||||||||||| |||||||||| | | ||||||||||||    
T  15187737 attaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttg 15187789  T

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Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 3596929 - 3596878
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| |||||||||||||| |||||||||| | |||| ||||||||    
T  3596929 attaataaatgagactgaaatctaaaggtgattattgtgccatatcattctt 3596878  T

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Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 285
Target Start/End: Complemental strand, 24844848 - 24844817
Alignment:
Q  254 tttatcaagaaattgtcccgaaattaatgtta 285  Q
    ||||||||||||||||||||||||||||||||    
T  24844848 tttatcaagaaattgtcccgaaattaatgtta 24844817  T

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Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 32064923 - 32064974
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| |||||||||||||| |||||||||| |  ||||||||||||    
T  32064923 attaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattctt 32064974  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 25581127 - 25581073
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| |   ||||||||||||||    
T  25581127 attaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaa 25581073  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 17841838 - 17841875
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaa 17841875  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 20091789 - 20091826
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaa 20091826  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 30055694 - 30055747
Alignment:
Q  325 ttaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    ||||||||| ||||| |||||||| |||||||||| |  |||||||||||||||    
T  30055694 ttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaa 30055747  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 31347770 - 31347807
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaa 31347807  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 32064822 - 32064785
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaa 32064785  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 34665459 - 34665422
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaa 34665422  T

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Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 39772789 - 39772826
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaa 39772826  T

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Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 40780117 - 40780154
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaa 40780154  T

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Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 42755030 - 42755067
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaa 42755067  T

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Target: scaffold0228 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 26113 - 26167
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| |||||||||| | ||||||||||||||||    
T  26113 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 26167  T

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Target: scaffold0228; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 16161 - 16215
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| | |||||||| | ||||||||||||||||    
T  16161 attaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaa 16215  T

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Target: scaffold0228; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 8479 - 8442
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaa 8442  T

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Target: scaffold0228; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 16061 - 16024
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaa 16024  T

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Target: scaffold0228; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 26013 - 25976
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaa 25976  T

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Target: scaffold0096 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 41187 - 41239
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttg 376  Q
    |||||||||| |||||||||||||| |||||||||| |||||| |||||||||    
T  41187 attaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttg 41239  T

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Target: scaffold0096; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 41088 - 41051
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaa 41051  T

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Target: scaffold0178 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 11798 - 11849
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| |||||||||||||| |||||||||| | |||||||||||||    
T  11798 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattctt 11849  T

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Target: scaffold0204 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 4573 - 4624
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattctt 375  Q
    |||||||||| |||||||||||||| |||||||||| | |||| ||||||||    
T  4573 attaataaatgagactgaaatctaaaggtgattattgtgccatatcattctt 4624  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 48026 - 48080
Alignment:
Q  324 attaataaataagactgaaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||||| |||||||||||||| | |||||||| | | ||||||||||||||    
T  48026 attaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaa 48080  T

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Target: scaffold0085; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 47927 - 47890
Alignment:
Q  341 aaatctaatggtgattattctaccatgtcattcttgaa 378  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaa 47890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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