View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17340_high_2 (Length: 416)

Name: NF17340_high_2
Description: NF17340
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17340_high_2
NF17340_high_2
[»] chr3 (80 HSPs)
chr3 (56-399)||(53475374-53475716)
chr3 (21-62)||(7051721-7051762)
chr3 (21-65)||(51284063-51284107)
chr3 (21-58)||(32963106-32963143)
chr3 (21-58)||(33868447-33868484)
chr3 (23-67)||(24813592-24813636)
chr3 (24-64)||(26806108-26806148)
chr3 (21-60)||(7181347-7181386)
chr3 (23-58)||(10044841-10044876)
chr3 (21-60)||(22103930-22103969)
chr3 (21-60)||(37728710-37728749)
chr3 (21-59)||(12050393-12050431)
chr3 (21-59)||(25149123-25149161)
chr3 (21-59)||(28673295-28673333)
chr3 (23-57)||(32978481-32978515)
chr3 (21-63)||(33212391-33212433)
chr3 (21-59)||(44543780-44543818)
chr3 (24-62)||(50647679-50647717)
chr3 (21-58)||(35868084-35868121)
chr3 (21-58)||(43868102-43868139)
chr3 (21-57)||(4024052-4024088)
chr3 (21-57)||(9499498-9499534)
chr3 (21-57)||(10220933-10220969)
chr3 (21-57)||(14428610-14428646)
chr3 (21-57)||(16435237-16435273)
chr3 (24-60)||(20862461-20862497)
chr3 (21-57)||(21458982-21459018)
chr3 (21-57)||(21756486-21756522)
chr3 (21-57)||(26593766-26593802)
chr3 (21-57)||(27646307-27646343)
chr3 (21-57)||(45252773-45252809)
chr3 (21-57)||(46049987-46050023)
chr3 (21-57)||(50517523-50517559)
chr3 (21-57)||(53164163-53164199)
chr3 (23-63)||(54866536-54866576)
chr3 (21-60)||(2993256-2993295)
chr3 (21-60)||(4759352-4759391)
chr3 (24-59)||(14428873-14428908)
chr3 (21-60)||(26306608-26306647)
chr3 (21-60)||(41392881-41392920)
chr3 (21-60)||(53361856-53361895)
chr3 (23-61)||(19897839-19897877)
chr3 (21-63)||(20862190-20862232)
chr3 (21-59)||(24087336-24087374)
chr3 (24-58)||(33868712-33868746)
chr3 (21-63)||(36098960-36099002)
chr3 (23-61)||(43408188-43408226)
chr3 (24-57)||(4024315-4024348)
chr3 (21-66)||(7462998-7463042)
chr3 (24-57)||(9779979-9780012)
chr3 (23-60)||(10015792-10015829)
chr3 (24-57)||(16434977-16435010)
chr3 (21-58)||(22832608-22832645)
chr3 (21-58)||(23700786-23700823)
chr3 (21-58)||(23719241-23719278)
chr3 (21-58)||(23737697-23737734)
chr3 (21-58)||(26221287-26221324)
chr3 (24-57)||(31531415-31531448)
chr3 (23-52)||(34811320-34811349)
chr3 (24-57)||(36005768-36005801)
chr3 (21-58)||(43158737-43158774)
chr3 (21-58)||(43701177-43701214)
chr3 (21-58)||(46845493-46845530)
chr3 (24-57)||(52058985-52059018)
chr3 (21-57)||(8321925-8321961)
chr3 (21-57)||(12683183-12683219)
chr3 (21-57)||(16776888-16776924)
chr3 (21-61)||(17699032-17699072)
chr3 (21-57)||(20656311-20656347)
chr3 (21-57)||(26058546-26058582)
chr3 (21-57)||(26806379-26806415)
chr3 (24-52)||(39952535-39952563)
chr3 (25-57)||(42044257-42044289)
chr3 (23-59)||(42801519-42801555)
chr3 (21-57)||(46878440-46878476)
chr3 (21-57)||(47066934-47066970)
chr3 (21-57)||(50647945-50647981)
chr3 (21-57)||(50726784-50726820)
chr3 (21-57)||(50786028-50786064)
chr3 (21-57)||(54782918-54782954)
[»] chr7 (49 HSPs)
chr7 (21-65)||(33858867-33858911)
chr7 (21-58)||(29177253-29177290)
chr7 (23-63)||(22991747-22991787)
chr7 (21-60)||(32814430-32814469)
chr7 (21-60)||(39871614-39871653)
chr7 (21-63)||(21119551-21119593)
chr7 (21-63)||(34012518-34012560)
chr7 (21-67)||(34979078-34979124)
chr7 (21-63)||(48521023-48521065)
chr7 (21-62)||(19920558-19920599)
chr7 (21-58)||(29286038-29286075)
chr7 (21-58)||(36698132-36698169)
chr7 (21-58)||(38858297-38858334)
chr7 (21-57)||(19292839-19292875)
chr7 (21-57)||(19845670-19845706)
chr7 (21-57)||(21295151-21295187)
chr7 (21-57)||(26255096-26255132)
chr7 (21-57)||(32872376-32872412)
chr7 (21-57)||(39197718-39197754)
chr7 (21-57)||(40300230-40300266)
chr7 (21-57)||(41026097-41026133)
chr7 (21-57)||(41252362-41252398)
chr7 (21-52)||(17317446-17317477)
chr7 (21-64)||(33381574-33381617)
chr7 (24-63)||(38428411-38428450)
chr7 (24-58)||(7400128-7400162)
chr7 (24-58)||(20075111-20075145)
chr7 (23-57)||(27529229-27529263)
chr7 (24-58)||(28060981-28061015)
chr7 (21-59)||(36646638-36646676)
chr7 (23-57)||(41444466-41444500)
chr7 (21-58)||(2290017-2290054)
chr7 (21-58)||(8290902-8290939)
chr7 (21-62)||(25247691-25247732)
chr7 (23-64)||(32118166-32118207)
chr7 (23-52)||(42888083-42888112)
chr7 (21-58)||(44547425-44547462)
chr7 (21-65)||(6799548-6799591)
chr7 (21-57)||(7449270-7449306)
chr7 (21-57)||(7703821-7703857)
chr7 (21-61)||(12616384-12616424)
chr7 (21-57)||(20074889-20074925)
chr7 (32-60)||(21295423-21295451)
chr7 (21-57)||(31457997-31458033)
chr7 (21-57)||(31803121-31803157)
chr7 (21-57)||(36711299-36711335)
chr7 (21-57)||(41003155-41003191)
chr7 (21-57)||(43081252-43081288)
chr7 (23-59)||(45907243-45907279)
[»] chr2 (53 HSPs)
chr2 (21-61)||(15228150-15228190)
chr2 (21-59)||(22897389-22897427)
chr2 (21-58)||(16805792-16805829)
chr2 (21-58)||(16845073-16845110)
chr2 (21-63)||(5664632-5664674)
chr2 (21-59)||(11201681-11201719)
chr2 (21-59)||(13197646-13197684)
chr2 (23-57)||(32120944-32120978)
chr2 (21-63)||(34062666-34062708)
chr2 (21-59)||(34883849-34883887)
chr2 (21-58)||(6027617-6027654)
chr2 (21-58)||(8990203-8990240)
chr2 (21-58)||(20252209-20252246)
chr2 (21-58)||(40607701-40607738)
chr2 (21-58)||(41450515-41450552)
chr2 (21-57)||(1359791-1359827)
chr2 (21-57)||(2438225-2438261)
chr2 (21-57)||(7491844-7491880)
chr2 (21-57)||(8716893-8716929)
chr2 (21-57)||(11852186-11852222)
chr2 (21-57)||(16108476-16108512)
chr2 (21-57)||(17408295-17408331)
chr2 (21-57)||(27560206-27560242)
chr2 (21-57)||(36131029-36131065)
chr2 (21-52)||(30466110-30466141)
chr2 (24-63)||(39833733-39833772)
chr2 (21-52)||(41968203-41968234)
chr2 (24-58)||(16108214-16108248)
chr2 (25-59)||(22182929-22182963)
chr2 (21-59)||(25624731-25624769)
chr2 (23-57)||(34113789-34113823)
chr2 (24-57)||(2438489-2438522)
chr2 (21-58)||(4711727-4711764)
chr2 (24-57)||(7492108-7492141)
chr2 (21-58)||(8841658-8841695)
chr2 (24-57)||(22897655-22897688)
chr2 (21-58)||(26322294-26322331)
chr2 (21-58)||(34113530-34113567)
chr2 (21-58)||(40680726-40680763)
chr2 (24-57)||(45474351-45474384)
chr2 (25-57)||(1142997-1143029)
chr2 (21-57)||(2060316-2060352)
chr2 (21-57)||(7116300-7116336)
chr2 (21-57)||(8295321-8295357)
chr2 (32-60)||(8841394-8841422)
chr2 (21-57)||(8912875-8912911)
chr2 (21-57)||(10757980-10758015)
chr2 (23-59)||(12890211-12890247)
chr2 (21-57)||(19353191-19353227)
chr2 (21-57)||(23788969-23789005)
chr2 (32-64)||(23789241-23789273)
chr2 (21-57)||(28566151-28566187)
chr2 (23-55)||(42629373-42629405)
[»] chr5 (44 HSPs)
chr5 (24-63)||(41383906-41383945)
chr5 (21-64)||(41384173-41384216)
chr5 (24-63)||(14649182-14649221)
chr5 (21-64)||(14913641-14913684)
chr5 (21-59)||(16127257-16127295)
chr5 (21-59)||(41641093-41641131)
chr5 (21-58)||(6673229-6673266)
chr5 (23-64)||(7940714-7940755)
chr5 (21-58)||(22527691-22527728)
chr5 (21-58)||(22657767-22657804)
chr5 (21-58)||(26894874-26894911)
chr5 (21-58)||(34662203-34662240)
chr5 (21-58)||(40004410-40004447)
chr5 (21-58)||(40643093-40643130)
chr5 (21-57)||(1265949-1265985)
chr5 (21-57)||(7951562-7951598)
chr5 (23-59)||(9020692-9020728)
chr5 (21-57)||(9828393-9828429)
chr5 (21-57)||(13660861-13660897)
chr5 (21-64)||(3160528-3160571)
chr5 (24-67)||(3497530-3497573)
chr5 (23-66)||(7734824-7734867)
chr5 (21-60)||(16153256-16153295)
chr5 (21-60)||(42561350-42561389)
chr5 (24-58)||(186362-186396)
chr5 (21-59)||(8949810-8949848)
chr5 (23-57)||(10734526-10734560)
chr5 (21-58)||(3028012-3028049)
chr5 (24-57)||(9828657-9828690)
chr5 (21-58)||(15190816-15190853)
chr5 (21-58)||(15521943-15521980)
chr5 (25-58)||(16440930-16440963)
chr5 (21-58)||(23260139-23260176)
chr5 (21-58)||(25601061-25601098)
chr5 (21-58)||(32147293-32147330)
chr5 (24-57)||(40004149-40004182)
chr5 (21-57)||(3497801-3497837)
chr5 (21-57)||(13862996-13863032)
chr5 (24-60)||(15190551-15190587)
chr5 (21-57)||(19571940-19571976)
chr5 (21-57)||(23286475-23286511)
chr5 (24-64)||(32147555-32147595)
chr5 (25-57)||(40738410-40738442)
chr5 (21-57)||(43060412-43060448)
[»] chr4 (70 HSPs)
chr4 (21-60)||(17610021-17610060)
chr4 (21-58)||(24754077-24754114)
chr4 (21-66)||(52977973-52978018)
chr4 (21-57)||(6753525-6753561)
chr4 (21-61)||(28298372-28298412)
chr4 (21-65)||(52870636-52870680)
chr4 (21-63)||(33413512-33413554)
chr4 (21-59)||(45742807-45742845)
chr4 (21-58)||(4035824-4035861)
chr4 (23-60)||(26889902-26889939)
chr4 (21-57)||(5375558-5375594)
chr4 (21-57)||(5743660-5743696)
chr4 (21-57)||(9328241-9328277)
chr4 (21-57)||(10588075-10588111)
chr4 (21-57)||(19282082-19282118)
chr4 (23-63)||(20286024-20286064)
chr4 (23-63)||(25123977-25124017)
chr4 (21-57)||(26626003-26626039)
chr4 (21-57)||(30771528-30771564)
chr4 (21-57)||(32032994-32033030)
chr4 (21-57)||(34273220-34273256)
chr4 (21-57)||(36901111-36901147)
chr4 (25-57)||(39144404-39144436)
chr4 (21-57)||(44294789-44294825)
chr4 (21-57)||(47806860-47806896)
chr4 (21-57)||(50352064-50352100)
chr4 (21-57)||(50533884-50533920)
chr4 (21-57)||(55632260-55632296)
chr4 (23-58)||(3085444-3085479)
chr4 (24-59)||(20747434-20747469)
chr4 (21-64)||(48030306-48030349)
chr4 (21-52)||(54623806-54623837)
chr4 (21-59)||(2615946-2615984)
chr4 (21-59)||(6807427-6807465)
chr4 (23-57)||(13620857-13620891)
chr4 (23-57)||(20391440-20391474)
chr4 (21-67)||(25708679-25708725)
chr4 (23-57)||(35675923-35675957)
chr4 (21-59)||(36391852-36391890)
chr4 (23-57)||(39114890-39114924)
chr4 (21-59)||(45097166-45097204)
chr4 (21-59)||(49793089-49793127)
chr4 (21-59)||(56432516-56432554)
chr4 (24-57)||(4036089-4036122)
chr4 (21-58)||(4415964-4416001)
chr4 (24-57)||(4549629-4549662)
chr4 (21-58)||(6462691-6462728)
chr4 (21-62)||(16545984-16546025)
chr4 (21-58)||(20455182-20455219)
chr4 (21-58)||(28501387-28501424)
chr4 (24-57)||(29014064-29014097)
chr4 (21-62)||(31937071-31937112)
chr4 (21-58)||(32899219-32899256)
chr4 (21-58)||(46949991-46950028)
chr4 (23-52)||(47683094-47683123)
chr4 (24-57)||(55631999-55632032)
chr4 (21-57)||(1859144-1859180)
chr4 (21-57)||(15241480-15241516)
chr4 (21-57)||(25124247-25124283)
chr4 (21-57)||(28495380-28495416)
chr4 (21-57)||(29427493-29427529)
chr4 (21-57)||(29520165-29520201)
chr4 (23-59)||(33501875-33501911)
chr4 (21-57)||(43387994-43388030)
chr4 (21-57)||(47228729-47228765)
chr4 (21-57)||(49373694-49373730)
chr4 (25-57)||(53277190-53277222)
chr4 (21-57)||(53564357-53564393)
chr4 (21-57)||(53629792-53629828)
chr4 (21-57)||(55563128-55563164)
[»] scaffold0012 (2 HSPs)
scaffold0012 (21-67)||(47630-47676)
scaffold0012 (24-57)||(47904-47937)
[»] chr6 (43 HSPs)
chr6 (21-59)||(25197150-25197188)
chr6 (23-57)||(1730104-1730138)
chr6 (21-63)||(25045644-25045686)
chr6 (24-57)||(1779784-1779817)
chr6 (21-58)||(4844399-4844436)
chr6 (21-66)||(8743179-8743224)
chr6 (21-58)||(9341837-9341874)
chr6 (21-58)||(30248646-30248683)
chr6 (21-57)||(231106-231142)
chr6 (24-68)||(9388518-9388562)
chr6 (21-57)||(29036126-29036162)
chr6 (21-57)||(34301833-34301869)
chr6 (25-60)||(12144043-12144078)
chr6 (23-62)||(13321329-13321368)
chr6 (21-60)||(19097802-19097841)
chr6 (22-57)||(23398141-23398176)
chr6 (23-57)||(9038642-9038676)
chr6 (21-63)||(9388792-9388834)
chr6 (21-59)||(11200592-11200630)
chr6 (23-57)||(11847835-11847869)
chr6 (21-59)||(15498627-15498665)
chr6 (32-66)||(23397870-23397904)
chr6 (23-57)||(25024509-25024543)
chr6 (24-58)||(34741730-34741764)
chr6 (21-59)||(34915544-34915582)
chr6 (21-58)||(402622-402659)
chr6 (21-58)||(5457411-5457448)
chr6 (25-58)||(11847570-11847603)
chr6 (21-58)||(13901640-13901677)
chr6 (21-58)||(23604459-23604496)
chr6 (21-57)||(287415-287451)
chr6 (24-60)||(345132-345168)
chr6 (21-57)||(925934-925970)
chr6 (21-57)||(1780045-1780081)
chr6 (21-57)||(2090658-2090694)
chr6 (21-57)||(10195994-10196030)
chr6 (32-60)||(12143776-12143804)
chr6 (21-57)||(13011121-13011157)
chr6 (21-57)||(13648130-13648166)
chr6 (23-59)||(16122517-16122553)
chr6 (23-59)||(16272971-16273007)
chr6 (21-57)||(32614989-32615025)
chr6 (21-57)||(33487833-33487869)
[»] chr8 (67 HSPs)
chr8 (21-58)||(40529306-40529343)
chr8 (21-61)||(13153924-13153964)
chr8 (21-61)||(28572042-28572082)
chr8 (21-61)||(28579635-28579675)
chr8 (21-57)||(44502620-44502656)
chr8 (21-60)||(34568487-34568526)
chr8 (21-63)||(28192176-28192218)
chr8 (21-59)||(34490515-34490553)
chr8 (21-58)||(8251934-8251971)
chr8 (26-63)||(12255090-12255127)
chr8 (26-63)||(12260633-12260670)
chr8 (21-58)||(18754143-18754180)
chr8 (21-58)||(32675758-32675795)
chr8 (21-57)||(51096-51132)
chr8 (21-57)||(1774342-1774378)
chr8 (21-57)||(2944273-2944309)
chr8 (21-57)||(8951429-8951465)
chr8 (21-65)||(14584132-14584176)
chr8 (21-57)||(14699452-14699488)
chr8 (21-57)||(33745896-33745932)
chr8 (21-57)||(39029178-39029214)
chr8 (21-57)||(41014504-41014540)
chr8 (23-58)||(17856779-17856814)
chr8 (23-58)||(26016568-26016603)
chr8 (24-59)||(44250857-44250892)
chr8 (25-63)||(2944007-2944045)
chr8 (32-62)||(26990562-26990592)
chr8 (24-58)||(29279460-29279494)
chr8 (24-58)||(40530410-40530444)
chr8 (23-57)||(41898499-41898533)
chr8 (21-59)||(42598716-42598754)
chr8 (23-57)||(42885054-42885088)
chr8 (21-63)||(44748464-44748506)
chr8 (21-58)||(2152241-2152278)
chr8 (21-62)||(2786112-2786153)
chr8 (21-58)||(5593420-5593457)
chr8 (21-58)||(5784149-5784186)
chr8 (24-57)||(11798869-11798902)
chr8 (21-58)||(12802610-12802647)
chr8 (24-57)||(13154192-13154225)
chr8 (23-60)||(23688168-23688205)
chr8 (23-60)||(26016831-26016868)
chr8 (21-58)||(29598223-29598260)
chr8 (23-64)||(35179593-35179634)
chr8 (21-66)||(36131252-36131297)
chr8 (23-64)||(39029439-39029480)
chr8 (24-57)||(43653943-43653976)
chr8 (21-58)||(43654204-43654241)
chr8 (21-61)||(4076168-4076208)
chr8 (21-57)||(5162304-5162340)
chr8 (21-57)||(7758910-7758946)
chr8 (32-64)||(8712049-8712081)
chr8 (21-57)||(8948352-8948388)
chr8 (21-57)||(9035540-9035576)
chr8 (21-57)||(11798605-11798641)
chr8 (21-57)||(17069845-17069881)
chr8 (21-57)||(17578392-17578428)
chr8 (25-57)||(18455720-18455752)
chr8 (21-57)||(18641381-18641417)
chr8 (24-64)||(18754410-18754450)
chr8 (23-63)||(23487058-23487098)
chr8 (21-57)||(36177104-36177140)
chr8 (21-57)||(38183567-38183602)
chr8 (21-57)||(38878721-38878757)
chr8 (21-57)||(40741265-40741301)
chr8 (21-61)||(40784887-40784927)
chr8 (21-57)||(44251122-44251158)
[»] scaffold0008 (1 HSPs)
scaffold0008 (21-69)||(259123-259171)
[»] chr1 (58 HSPs)
chr1 (21-61)||(39497429-39497469)
chr1 (21-65)||(41855474-41855518)
chr1 (21-60)||(11741394-11741433)
chr1 (21-64)||(30290258-30290301)
chr1 (21-60)||(37951950-37951989)
chr1 (21-59)||(50246930-50246968)
chr1 (21-58)||(4102715-4102752)
chr1 (24-61)||(9202241-9202278)
chr1 (21-58)||(22567065-22567102)
chr1 (21-62)||(44649624-44649665)
chr1 (21-58)||(45039411-45039448)
chr1 (21-62)||(46075868-46075909)
chr1 (21-58)||(50008484-50008521)
chr1 (21-58)||(52431175-52431212)
chr1 (21-57)||(943638-943674)
chr1 (21-57)||(1039382-1039418)
chr1 (21-57)||(1046288-1046324)
chr1 (21-57)||(15811233-15811269)
chr1 (21-57)||(23541979-23542015)
chr1 (21-57)||(36694854-36694890)
chr1 (21-57)||(36710955-36710991)
chr1 (23-63)||(38920233-38920273)
chr1 (21-57)||(39363195-39363231)
chr1 (21-57)||(49907021-49907057)
chr1 (21-60)||(7763750-7763789)
chr1 (32-63)||(30289596-30289627)
chr1 (21-56)||(30289863-30289898)
chr1 (24-67)||(46075597-46075640)
chr1 (24-58)||(1047991-1048025)
chr1 (23-57)||(3934606-3934640)
chr1 (23-61)||(16576095-16576133)
chr1 (21-63)||(25509203-25509245)
chr1 (24-58)||(39362933-39362967)
chr1 (24-58)||(39750120-39750154)
chr1 (21-58)||(1048252-1048288)
chr1 (21-54)||(13343776-13343809)
chr1 (26-63)||(15763310-15763347)
chr1 (24-57)||(23542243-23542276)
chr1 (23-64)||(25284070-25284111)
chr1 (21-58)||(27037268-27037305)
chr1 (21-58)||(37850440-37850477)
chr1 (24-57)||(39497697-39497730)
chr1 (21-58)||(42276162-42276199)
chr1 (24-57)||(44646535-44646568)
chr1 (24-57)||(44649893-44649926)
chr1 (25-58)||(52601990-52602023)
chr1 (21-57)||(7783991-7784027)
chr1 (23-59)||(8104291-8104327)
chr1 (23-67)||(14089981-14090025)
chr1 (21-57)||(14171542-14171578)
chr1 (23-63)||(15302747-15302787)
chr1 (21-57)||(16456636-16456672)
chr1 (23-59)||(17483731-17483767)
chr1 (21-57)||(39750382-39750418)
chr1 (21-57)||(43456622-43456658)
chr1 (21-57)||(45335885-45335921)
chr1 (24-60)||(47069052-47069088)
chr1 (23-51)||(51467475-51467503)
[»] scaffold0250 (1 HSPs)
scaffold0250 (21-59)||(9427-9465)
[»] scaffold0237 (1 HSPs)
scaffold0237 (24-65)||(6613-6654)
[»] scaffold0122 (1 HSPs)
scaffold0122 (21-58)||(12064-12101)
[»] scaffold0121 (1 HSPs)
scaffold0121 (21-58)||(24631-24668)
[»] scaffold0029 (1 HSPs)
scaffold0029 (21-58)||(51683-51720)
[»] scaffold0604 (1 HSPs)
scaffold0604 (21-57)||(3783-3819)
[»] scaffold0019 (1 HSPs)
scaffold0019 (21-57)||(117846-117882)
[»] scaffold0002 (1 HSPs)
scaffold0002 (23-58)||(355334-355369)
[»] scaffold0025 (2 HSPs)
scaffold0025 (21-59)||(65638-65676)
scaffold0025 (24-57)||(65378-65411)
[»] scaffold0107 (2 HSPs)
scaffold0107 (21-66)||(48645-48690)
scaffold0107 (23-59)||(48917-48953)
[»] scaffold0674 (1 HSPs)
scaffold0674 (21-57)||(5151-5187)
[»] scaffold0549 (1 HSPs)
scaffold0549 (21-57)||(10183-10219)
[»] scaffold0457 (1 HSPs)
scaffold0457 (21-57)||(4664-4700)
[»] scaffold0339 (1 HSPs)
scaffold0339 (21-57)||(7141-7177)
[»] scaffold0308 (1 HSPs)
scaffold0308 (21-57)||(14349-14385)
[»] scaffold0240 (1 HSPs)
scaffold0240 (21-57)||(18497-18533)
[»] scaffold0236 (1 HSPs)
scaffold0236 (23-51)||(17470-17498)
[»] scaffold0163 (1 HSPs)
scaffold0163 (23-59)||(1449-1485)
[»] scaffold0161 (1 HSPs)
scaffold0161 (21-57)||(3438-3474)
[»] scaffold0039 (1 HSPs)
scaffold0039 (21-57)||(104062-104098)
[»] scaffold0020 (1 HSPs)
scaffold0020 (23-59)||(164212-164248)
[»] scaffold0009 (1 HSPs)
scaffold0009 (23-63)||(246450-246490)


Alignment Details
Target: chr3 (Bit Score: 280; Significance: 1e-157; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 56 - 399
Target Start/End: Original strand, 53475374 - 53475716
Alignment:
Q  56 tattatttatttgtcagcttcaaattaacttatatacatatcatatatacttgcatcatatgcattttttcctctcttaagaatattactcatgaacaca 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53475374 tattatttatttgtcagcttcaaattaacttatatacatatcatatatacttgcatcatatgcattttttcctctcttaagaatattactcatgaacaca 53475473  T
Q  156 gttgaacattggaccctttttacttgtaactcaatgtcgattttttaatacttagatgactaatttgataatttttattatttaagagaatacttaattt 255  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53475474 gttgaacattggtccctttttacttgtaactcaatgtcgattttttaatacttagatgactaatttgataatttttattatttaagagaatacttaattt 53475573  T
Q  256 gattaaacaaagttcaatggtgttgatgnnnnnnnnnnnnattcaagtaggatagtgactaaaatttcactctaaaagtaataagtacggtgtatgagat 355  Q
    ||||||||||||||||||||||||||||            ||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||    
T  53475574 gattaaacaaagttcaatggtgttgatgtttttattttttattcaagtaggatagtgactagaatttcactctaaaagtaataagtgcggtgcatgagat 53475673  T
Q  356 tcaaaccttagctttgatgtatattataatgtattattcctacc 399  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  53475674 tcaaatcttagctttgatgtatattataatgt-ttattcctacc 53475716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 7051721 - 7051762
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatt 62  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7051721 tctcaaaaggatcttataattagggacggagggagtattatt 7051762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 51284063 - 51284107
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatttat 65  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  51284063 tctcaaaagggtcttataattagggacggagggagtattatttat 51284107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 32963106 - 32963143
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32963106 tctcaaaaggatcttataattagggacggagggagtat 32963143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 33868484 - 33868447
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33868484 tctcaaaaggatcttataattagggacggagggagtat 33868447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 24813636 - 24813592
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattatttattt 67  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||    
T  24813636 tcaaaaggatcttataattagggacggaggtagtatcatttattt 24813592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 26806148 - 26806108
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtattattta 64  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  26806148 caaaagggtcttataattagggacggagggagtattattta 26806108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 7181386 - 7181347
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  7181386 tctcaaaagggtcttataattagggacggagggagtatta 7181347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 10044876 - 10044841
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtat 58  Q
    ||||||||||||||||||||||||||||||||||||    
T  10044876 tcaaaaggatcttataattagggacggagggagtat 10044841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 22103930 - 22103969
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  22103930 tctcaaaagggtcttataattagggacggagggagtatta 22103969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 37728749 - 37728710
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  37728749 tctcaaaagggtcttataattagggacggagggagtatta 37728710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 12050393 - 12050431
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  12050393 tctcaaaagggtcttataattagggacggagggagtatt 12050431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 25149123 - 25149161
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  25149123 tctcaaaagggtcttataattagggacggagggagtatt 25149161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 28673295 - 28673333
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  28673295 tctcaaaaggatcttataattagggacggaggtagtatt 28673333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 32978515 - 32978481
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||||||    
T  32978515 tcaaaaggatcttataattagggacggagggagta 32978481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 33212433 - 33212391
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||||||||||||||||||||||||| |||| |||||    
T  33212433 tctcaaaaggatcttataattagggacggaggtagtaatattt 33212391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 44543818 - 44543780
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  44543818 tctcaaaagggtcttataattagggacggagggagtatt 44543780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 50647717 - 50647679
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtattatt 62  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  50647717 caaaagggtcttataattagggacggagggagtattatt 50647679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 35868084 - 35868121
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  35868084 tctcaaaagggtcttataattagggacggagggagtat 35868121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 43868139 - 43868102
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  43868139 tctcaaaagggtcttataattagggacggagggagtat 43868102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 4024088 - 4024052
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  4024088 tctcaaaagggtcttataattagggacggagggagta 4024052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 9499498 - 9499534
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  9499498 tctcaaaagggtcttataattagggacggagggagta 9499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 10220969 - 10220933
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10220969 tctcaaaagggtcttataattagggacggagggagta 10220933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 14428646 - 14428610
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  14428646 tctcaaaagggtcttataattagggacggagggagta 14428610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 16435237 - 16435273
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    ||||||||||||||||||||||| |||||||||||||    
T  16435237 tctcaaaaggatcttataattagagacggagggagta 16435273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 20862461 - 20862497
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtatta 60  Q
    ||||||| |||||||||||||||||||||||||||||    
T  20862461 caaaagggtcttataattagggacggagggagtatta 20862497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 21459018 - 21458982
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||| ||||    
T  21459018 tctcaaaaggatcttataattagggacggaggtagta 21458982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 21756522 - 21756486
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  21756522 tctcaaaagggtcttataattagggacggagggagta 21756486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 26593766 - 26593802
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  26593766 tctcaaaagggtcttataattagggacggagggagta 26593802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 27646307 - 27646343
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||| ||||    
T  27646307 tctcaaaaggatcttataattagggacggaggtagta 27646343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 45252809 - 45252773
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  45252809 tctcaaaagggtcttataattagggacggagggagta 45252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 46049987 - 46050023
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  46049987 tctcaaaagggtcttataattagggacggagggagta 46050023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 50517523 - 50517559
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||| ||||    
T  50517523 tctcaaaaggatcttataattagggacggaggtagta 50517559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 53164199 - 53164163
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||| ||||    
T  53164199 tctcaaaaggatcttataattagggacggaggtagta 53164163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 54866536 - 54866576
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||||||||||||||||||||||| |||| |||||    
T  54866536 tcaaaaggatcttataattagggacggaggtagtagtattt 54866576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 2993295 - 2993256
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  2993295 tctcaaaatgatcttataattagggacggaggtagtatta 2993256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 4759352 - 4759391
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  4759352 tctcaaaagggtcttataattagggacggaggtagtatta 4759391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 14428873 - 14428908
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtatt 59  Q
    ||||||| ||||||||||||||||||||||||||||    
T  14428873 caaaagggtcttataattagggacggagggagtatt 14428908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 26306608 - 26306647
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  26306608 tctcaaaagggtcttataattaggaacggagggagtatta 26306647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 41392881 - 41392920
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  41392881 tctcaaaagggtcttataattagggacggaggtagtatta 41392920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 53361856 - 53361895
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  53361856 tctcaaaatggtcttataattagggacggagggagtatta 53361895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 19897839 - 19897877
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattat 61  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  19897839 tcaaaagggtcttataattagggacggaggtagtattat 19897877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 20862232 - 20862190
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||    
T  20862232 tctcaaaagggtcttataattagggacggatggagtataattt 20862190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 24087336 - 24087374
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  24087336 tctcaaaagggtcttataattagggacggaggtagtatt 24087374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 33868712 - 33868746
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtat 58  Q
    ||||||| |||||||||||||||||||||||||||    
T  33868712 caaaagggtcttataattagggacggagggagtat 33868746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 36099002 - 36098960
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||| ||||||||||||||||||| |||||| |||||    
T  36099002 tctcaaaagggtcttataattagggacggatggagtaatattt 36098960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 43408226 - 43408188
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattat 61  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  43408226 tcaaaaggaccttataattagggacggaggtagtattat 43408188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 4024315 - 4024348
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  4024315 caaaagggtcttataattagggacggagggagta 4024348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 7462998 - 7463042
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatttatt 66  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||||    
T  7462998 tctcaaaaggatcttataattagagacgga-ggagtactatttatt 7463042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 9780012 - 9779979
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  9780012 caaaagggtcttataattagggacggagggagta 9779979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 10015792 - 10015829
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  10015792 tcaaaagggtcttataattagggacggaggtagtatta 10015829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 16435010 - 16434977
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  16435010 caaaagggtcttataattagggacggagggagta 16434977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 22832608 - 22832645
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  22832608 tctcaaaagggtcttataattagggacggaaggagtat 22832645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 23700786 - 23700823
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||| | |||||||||||||||||||||||||||    
T  23700786 tctcaaaaaggtcttataattagggacggagggagtat 23700823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 23719241 - 23719278
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||| | |||||||||||||||||||||||||||    
T  23719241 tctcaaaaaggtcttataattagggacggagggagtat 23719278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 23737697 - 23737734
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||| | |||||||||||||||||||||||||||    
T  23737697 tctcaaaaaggtcttataattagggacggagggagtat 23737734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 26221324 - 26221287
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||  |||||||||||||||||||||||||||    
T  26221324 tctcaaaagagtcttataattagggacggagggagtat 26221287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 31531415 - 31531448
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  31531415 caaaagggtcttataattagggacggagggagta 31531448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 52
Target Start/End: Complemental strand, 34811349 - 34811320
Alignment:
Q  23 tcaaaaggatcttataattagggacggagg 52  Q
    ||||||||||||||||||||||||||||||    
T  34811349 tcaaaaggatcttataattagggacggagg 34811320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 36005768 - 36005801
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  36005768 caaaagggtcttataattagggacggagggagta 36005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 43158737 - 43158774
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  43158737 tctcaaaatgatcttataattagggacggaggaagtat 43158774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 43701214 - 43701177
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  43701214 tctcaaaagggtcttataattagggacagagggagtat 43701177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 46845493 - 46845530
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  46845493 tctcaaaagggtcttataattagggacggaggtagtat 46845530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 52059018 - 52058985
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  52059018 caaaagggtcttataattagggacggagggagta 52058985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 8321961 - 8321925
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  8321961 tctcaaaagggtcttataattagggacggaggtagta 8321925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 12683183 - 12683219
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| | ||||||||||||||||||||||||||    
T  12683183 tctcaaaatggtcttataattagggacggagggagta 12683219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 16776888 - 16776924
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  16776888 tctcaaaaggatcctataattagggacggaggtagta 16776924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 17699032 - 17699072
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattat 61  Q
    |||||||| | ||||||||||||||||||||| ||||||||    
T  17699032 tctcaaaatggtcttataattagggacggaggtagtattat 17699072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 20656311 - 20656347
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  20656311 tctcaaaagaatcttataattaggaacggagggagta 20656347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 26058582 - 26058546
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  26058582 tctcaaaagggtcttataattagggacggaggaagta 26058546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 26806379 - 26806415
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  26806379 tctcaaaaggctcttataattagggacggaaggagta 26806415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 39952535 - 39952563
Alignment:
Q  24 caaaaggatcttataattagggacggagg 52  Q
    |||||||||||||||||||||||||||||    
T  39952535 caaaaggatcttataattagggacggagg 39952563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 42044257 - 42044289
Alignment:
Q  25 aaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  42044257 aaaaggatcttataattagggacggaggtagta 42044289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 42801555 - 42801519
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  42801555 tcaaaagggtcttataattagggacggaggtagtatt 42801519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 46878440 - 46878476
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  46878440 tctcaaaagggtcttataattaaggacggagggagta 46878476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 47066970 - 47066934
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  47066970 tctcaaaagggtcttataattagggacggaggaagta 47066934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 50647945 - 50647981
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| |||||||||||| |||||||||||||    
T  50647945 tctcaaaagggtcttataattagagacggagggagta 50647981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 50726784 - 50726820
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  50726784 tctcaaaagggtcttataatcagggacggagggagta 50726820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 50786064 - 50786028
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  50786064 tctcaaaagggtcttataatcagggacggagggagta 50786028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 54782918 - 54782954
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  54782918 tctcaaaagggtcttataattagggacgaagggagta 54782954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 33858867 - 33858911
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatttat 65  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  33858867 tctcaaaagggtcttataattagggacggagggagtattatttat 33858911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 29177253 - 29177290
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29177253 tctcaaaaggatcttataattagggacggagggagtat 29177290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 22991747 - 22991787
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  22991747 tcaaaaggatcttataattagggacggaggtagtattattt 22991787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 32814469 - 32814430
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  32814469 tctcaaaagggtcttataattagggacggagggagtatta 32814430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 39871614 - 39871653
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  39871614 tctcaaaagggtcttataattagggacggagggagtatta 39871653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 21119593 - 21119551
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||||||||||||||||||||||||| |||| |||||    
T  21119593 tctcaaaaggatcttataattagggacggaggtagtactattt 21119551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 34012518 - 34012560
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||| ||||||||||||||||||||| ||||||||||    
T  34012518 tctcaaaagggtcttataattagggacggaggtagtattattt 34012560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 34979078 - 34979124
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatttattt 67  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||    
T  34979078 tctcaaaagagtcttataattagggacggagggagtataatttattt 34979124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 48521065 - 48521023
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||| |||||||||||||||||||||||||| |||||    
T  48521065 tctcaaaagggtcttataattagggacggagggagtactattt 48521023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 19920599 - 19920558
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatt 62  Q
    |||||||||| |||||||||||||||||||||||||| ||||    
T  19920599 tctcaaaagggtcttataattagggacggagggagtagtatt 19920558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 29286038 - 29286075
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  29286038 tctcaaaagggtcttataattagggacggagggagtat 29286075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 36698132 - 36698169
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  36698132 tctcaaaagggtcttataattagggacggagggagtat 36698169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 38858334 - 38858297
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  38858334 tctcaaaagggtcttataattagggacggagggagtat 38858297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 19292875 - 19292839
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||| ||||    
T  19292875 tctcaaaaggatcttataattagggacggaggtagta 19292839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 19845670 - 19845706
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||| ||||    
T  19845670 tctcaaaaggatcttataattagggacggaggtagta 19845706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 21295187 - 21295151
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  21295187 tctcaaaagggtcttataattagggacggagggagta 21295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 26255132 - 26255096
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  26255132 tctcaaaagggtcttataattagggacggagggagta 26255096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 32872376 - 32872412
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  32872376 tctcaaaagggtcttataattagggacggagggagta 32872412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 39197754 - 39197718
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  39197754 tctcaaaagggtcttataattagggacggagggagta 39197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 40300266 - 40300230
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  40300266 tctcaaaagggtcttataattagggacggagggagta 40300230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 41026097 - 41026133
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  41026097 tctcaaaagggtcttataattagggacggagggagta 41026133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 41252362 - 41252398
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  41252362 tctcaaaagggtcttataattagggacggagggagta 41252398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 52
Target Start/End: Complemental strand, 17317477 - 17317446
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagg 52  Q
    ||||||||||||||||||||||||||||||||    
T  17317477 tctcaaaaggatcttataattagggacggagg 17317446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 33381574 - 33381617
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattta 64  Q
    |||||||||| ||||||||||||||||||||| |||||| ||||    
T  33381574 tctcaaaagggtcttataattagggacggaggtagtatttttta 33381617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 38428411 - 38428450
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtattattt 63  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  38428411 caaaagggtcttataattagggacggagggagtaatattt 38428450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 7400162 - 7400128
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtat 58  Q
    ||||||||||||||||||||||||||||| |||||    
T  7400162 caaaaggatcttataattagggacggaggtagtat 7400128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 20075111 - 20075145
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtat 58  Q
    ||||||| |||||||||||||||||||||||||||    
T  20075111 caaaagggtcttataattagggacggagggagtat 20075145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 27529263 - 27529229
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||| ||||    
T  27529263 tcaaaaggatcttataattagggacggaggtagta 27529229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 28060981 - 28061015
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtat 58  Q
    ||||||| |||||||||||||||||||||||||||    
T  28060981 caaaagggtcttataattagggacggagggagtat 28061015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 36646638 - 36646676
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  36646638 tctcaaaagggtcttctaattagggacggagggagtatt 36646676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 41444466 - 41444500
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||| ||||    
T  41444466 tcaaaaggatcttataattagggacggaggtagta 41444500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 2290017 - 2290054
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  2290017 tctcaaaagggtcttataattagggacggaggtagtat 2290054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 8290939 - 8290902
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  8290939 tctcaaagggatcttataattagggacggaggaagtat 8290902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 25247691 - 25247732
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatt 62  Q
    |||||||||  |||||||||||||||||||||||||| ||||    
T  25247691 tctcaaaagagtcttataattagggacggagggagtagtatt 25247732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 32118166 - 32118207
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattattta 64  Q
    |||||||| ||||||||||||||||||||| |||| ||||||    
T  32118166 tcaaaagggtcttataattagggacggaggtagtactattta 32118207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 52
Target Start/End: Original strand, 42888083 - 42888112
Alignment:
Q  23 tcaaaaggatcttataattagggacggagg 52  Q
    ||||||||||||||||||||||||||||||    
T  42888083 tcaaaaggatcttataattagggacggagg 42888112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 44547462 - 44547425
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||| | |||||||||||||||||||||||||||    
T  44547462 tctcaaaaaggtcttataattagggacggagggagtat 44547425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 6799548 - 6799591
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatttat 65  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||||    
T  6799548 tctcaaaagg-tcttataattagggacggaggtagtataatttat 6799591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 7449306 - 7449270
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| | ||||||||||||||||||||||||||    
T  7449306 tctcaaaatggtcttataattagggacggagggagta 7449270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 7703821 - 7703857
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  7703821 tctcaaaagaatcttataattaaggacggagggagta 7703857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 12616384 - 12616424
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattat 61  Q
    |||||||||| ||||||||| ||||||||||| ||||||||    
T  12616384 tctcaaaagggtcttataataagggacggaggtagtattat 12616424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 20074925 - 20074889
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    ||||||||| || ||||||||||||||||||||||||    
T  20074925 tctcaaaagaatattataattagggacggagggagta 20074889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 21295423 - 21295451
Alignment:
Q  32 tcttataattagggacggagggagtatta 60  Q
    |||||||||||||||||||||||||||||    
T  21295423 tcttataattagggacggagggagtatta 21295451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 31458033 - 31457997
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  31458033 tctcaaaagggtcttataattagggacggaggaagta 31457997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 31803121 - 31803157
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  31803121 tctcaaaaagatcttataattagggacggaggtagta 31803157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 36711299 - 36711335
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  36711299 tctcaaaagggtcttataattaggaacggagggagta 36711335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 41003155 - 41003191
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  41003155 tctcaaaagggtcttataattaaggacggagggagta 41003191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 43081288 - 43081252
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  43081288 tctcaaaaggatcttataattagggacgaaggtagta 43081252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 45907279 - 45907243
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||| | ||||||||||||||||||||||||||    
T  45907279 tcaaaagggtattataattagggacggagggagtatt 45907243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 15228150 - 15228190
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattat 61  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15228150 tctcaaaaggatcttataattagggacggagggagtattat 15228190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 22897427 - 22897389
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22897427 tctcaaaaggatcttataattagggacggagggagtatt 22897389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 16805792 - 16805829
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16805792 tctcaaaaggatcttataattagggacggagggagtat 16805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 16845073 - 16845110
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16845073 tctcaaaaggatcttataattagggacggagggagtat 16845110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 5664674 - 5664632
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||| | ||||||||||||||||||||||||||||||||    
T  5664674 tctcaaaaaggtcttataattagggacggagggagtattattt 5664632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 11201719 - 11201681
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  11201719 tctcaaaagggtcttataattagggacggagggagtatt 11201681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 13197646 - 13197684
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  13197646 tctcaaaagaatcttataattagggacggagggagtatt 13197684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 32120978 - 32120944
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||||||    
T  32120978 tcaaaaggatcttataattagggacggagggagta 32120944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 34062666 - 34062708
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||| ||||||||||||||||||||||||||| ||||    
T  34062666 tctcaaaagggtcttataattagggacggagggagtataattt 34062708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 34883849 - 34883887
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  34883849 tctcaaaagggtcttataattagggacggagggagtatt 34883887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 6027654 - 6027617
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||||||||||||||||||||||||| |||||    
T  6027654 tctcaaaaggatcttataattagggacggaggtagtat 6027617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 8990240 - 8990203
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||| |||||||||||||||||||||||||||||    
T  8990240 tctcaaaaagatcttataattagggacggagggagtat 8990203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 20252246 - 20252209
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  20252246 tctcaaaagggtcttataattagggacggagggagtat 20252209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 40607738 - 40607701
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  40607738 tctcaaaagggtcttataattagggacggagggagtat 40607701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 41450552 - 41450515
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  41450552 tctcaaaagggtcttataattagggacggagggagtat 41450515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 1359827 - 1359791
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||| ||||||||||||||||||||||||||||||||    
T  1359827 tctccaaaggatcttataattagggacggagggagta 1359791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 2438261 - 2438225
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  2438261 tctcaaaagggtcttataattagggacggagggagta 2438225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 7491880 - 7491844
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  7491880 tctcaaaagggtcttataattagggacggagggagta 7491844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 8716893 - 8716929
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  8716893 tctcaaaagggtcttataattagggacggagggagta 8716929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 11852186 - 11852222
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||| ||||    
T  11852186 tctcaaaaggatcttataattagggacggaggtagta 11852222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 16108476 - 16108512
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    ||||||||| |||||||||||||||||||||||||||    
T  16108476 tctcaaaagaatcttataattagggacggagggagta 16108512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 17408295 - 17408331
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  17408295 tctcaaaagggtcttataattagggacggagggagta 17408331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 27560242 - 27560206
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  27560242 tctcaaaagggtcttataattagggacggagggagta 27560206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 36131029 - 36131065
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  36131029 tctcaaaagggtcttataattagggacggagggagta 36131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 52
Target Start/End: Complemental strand, 30466141 - 30466110
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagg 52  Q
    ||||||||||||||||||||||||||||||||    
T  30466141 tctcaaaaggatcttataattagggacggagg 30466110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 39833772 - 39833733
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtattattt 63  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  39833772 caaaagggtcttataattagggacggagggagtataattt 39833733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 52
Target Start/End: Original strand, 41968203 - 41968234
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagg 52  Q
    ||||||||||||||||||||||||||||||||    
T  41968203 tctcaaaaggatcttataattagggacggagg 41968234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 16108248 - 16108214
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtat 58  Q
    ||||||| |||||||||||||||||||||||||||    
T  16108248 caaaagggtcttataattagggacggagggagtat 16108214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 22182929 - 22182963
Alignment:
Q  25 aaaaggatcttataattagggacggagggagtatt 59  Q
    |||||| ||||||||||||||||||||||||||||    
T  22182929 aaaagggtcttataattagggacggagggagtatt 22182963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 25624769 - 25624731
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  25624769 tctcaaaaaggtcttataattagggacggagggagtatt 25624731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 34113789 - 34113823
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| ||||||||||||||||||||||||||    
T  34113789 tcaaaagggtcttataattagggacggagggagta 34113823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 2438489 - 2438522
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  2438489 caaaagggtcttataattagggacggagggagta 2438522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 4711764 - 4711727
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  4711764 tctcaaaagggtcttttaattagggacggagggagtat 4711727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 7492108 - 7492141
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  7492108 caaaagggtcttataattagggacggagggagta 7492141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 8841658 - 8841695
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  8841658 tctcaaaagggtcttataattaaggacggagggagtat 8841695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 22897655 - 22897688
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  22897655 caaaagggtcttataattagggacggagggagta 22897688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 26322294 - 26322331
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  26322294 tctcaaaagggtcttataattagggacggaggtagtat 26322331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 34113567 - 34113530
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  34113567 tctcaaaagggtcttataattagggacggatggagtat 34113530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 40680763 - 40680726
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  40680763 tctcaaaagggtcttataattagggacggatggagtat 40680726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 45474384 - 45474351
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  45474384 caaaagggtcttataattagggacggagggagta 45474351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 1143029 - 1142997
Alignment:
Q  25 aaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  1143029 aaaaggatcttataattagggacggaggtagta 1142997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 2060352 - 2060316
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  2060352 tctcaaaagggtcttataattagggacggaggtagta 2060316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 7116300 - 7116336
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  7116300 tctcaaaagggtcttataattagggacggaggtagta 7116336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 8295357 - 8295321
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  8295357 tctcaaaaggatcttataattagggacgaaggtagta 8295321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 60
Target Start/End: Complemental strand, 8841422 - 8841394
Alignment:
Q  32 tcttataattagggacggagggagtatta 60  Q
    |||||||||||||||||||||||||||||    
T  8841422 tcttataattagggacggagggagtatta 8841394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 8912875 - 8912911
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  8912875 tctcaaaagggtcttataattagggacggaggtagta 8912911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 10757980 - 10758015
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10757980 tctcaaaagg-tcttataattagggacggagggagta 10758015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 12890211 - 12890247
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  12890211 tcaaaagggtcttataattagggacggaggtagtatt 12890247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 19353227 - 19353191
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  19353227 tctcaaaaggatcttataattagcgacggaggtagta 19353191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 23789005 - 23788969
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  23789005 tctcaaaagggtcttataattaaggacggagggagta 23788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 23789241 - 23789273
Alignment:
Q  32 tcttataattagggacggagggagtattattta 64  Q
    ||||||||||||||||||||||||||| |||||    
T  23789241 tcttataattagggacggagggagtataattta 23789273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 28566187 - 28566151
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  28566187 tctcaaaagggtcttataattagggacggaggtagta 28566151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 42629405 - 42629373
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggag 55  Q
    |||||||| ||||||||||||||||||||||||    
T  42629405 tcaaaagggtcttataattagggacggagggag 42629373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 41383945 - 41383906
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtattattt 63  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41383945 caaaaggatcttataattagggacggagggagtattattt 41383906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 41384173 - 41384216
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattta 64  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  41384173 tctcaaaaggatcttataattagggacggagggagtataattta 41384216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 14649221 - 14649182
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtattattt 63  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  14649221 caaaaggatcttataattagggacggaggtagtattattt 14649182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 14913684 - 14913641
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattta 64  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  14913684 tctcaaaagggtcttataattagggacggagggagtataattta 14913641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 16127295 - 16127257
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  16127295 tctcaaaagggtcttataattagggacggagggagtatt 16127257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 41641131 - 41641093
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  41641131 tctcaaaatgatcttataattagggacggagggagtatt 41641093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 6673229 - 6673266
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  6673229 tctcaaaagggtcttataattagggacggagggagtat 6673266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 7940714 - 7940755
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattattta 64  Q
    ||||||||||| |||||||||||||||||| |||||||||||    
T  7940714 tcaaaaggatcctataattagggacggaggtagtattattta 7940755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 22527728 - 22527691
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  22527728 tctcaaaagggtcttataattagggacggagggagtat 22527691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 22657804 - 22657767
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||||||||||||||||||||||||| |||||    
T  22657804 tctcaaaaggatcttataattagggacggaggtagtat 22657767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 26894874 - 26894911
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  26894874 tctcaaaagggtcttataattagggacggagggagtat 26894911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 34662240 - 34662203
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  34662240 tctcaaaagggtcttataattagggacggagggagtat 34662203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 40004410 - 40004447
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  40004410 tctcaaaagggtcttataattagggacggagggagtat 40004447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 40643130 - 40643093
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||||||||||||||||||||||||| |||||    
T  40643130 tctcaaaaggatcttataattagggacggaggtagtat 40643093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 1265985 - 1265949
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  1265985 tctcaaaagggtcttataattagggacggagggagta 1265949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 7951598 - 7951562
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  7951598 tctcaaaagggtcttataattagggacggagggagta 7951562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 9020728 - 9020692
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||| ||||||||||||||||||||||||||||    
T  9020728 tcaaaagggtcttataattagggacggagggagtatt 9020692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 9828429 - 9828393
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  9828429 tctcaaaagggtcttataattagggacggagggagta 9828393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 13660897 - 13660861
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    ||||||||||||||||||||||| |||||||||||||    
T  13660897 tctcaaaaggatcttataattagagacggagggagta 13660861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 3160528 - 3160571
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattta 64  Q
    |||||||| ||||||||||||||||||||| | |||||||||||    
T  3160528 tctcaaaatgatcttataattagggacggatgtagtattattta 3160571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 3497573 - 3497530
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtattatttattt 67  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||    
T  3497573 caaaagggtcttataattagggacggatggagtattattaattt 3497530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 7734867 - 7734824
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattatttatt 66  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||    
T  7734867 tcaaaaggatcttataattagagacggaggtagtatcatttatt 7734824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 16153256 - 16153295
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||| ||||||||||||||||||| |||||||||    
T  16153256 tctcaaaagggtcttataattagggacggatggagtatta 16153295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 42561350 - 42561389
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  42561350 tctcaaaaggatcttataattaaggacggagggaatatta 42561389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 186362 - 186396
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtat 58  Q
    ||||||| |||||||||||||||||||||||||||    
T  186362 caaaagggtcttataattagggacggagggagtat 186396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 8949848 - 8949810
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  8949848 tctcaaaagggtcttataattagggacggaggtagtatt 8949810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 10734526 - 10734560
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| ||||||||||||||||||||||||||    
T  10734526 tcaaaagggtcttataattagggacggagggagta 10734560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 3028049 - 3028012
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  3028049 tctcaaaagggtcttataattagggacggaggtagtat 3028012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 9828657 - 9828690
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  9828657 caaaagggtcttataattagggacggagggagta 9828690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 15190816 - 15190853
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||  |||||||||||||||||||||||||||    
T  15190816 tctcaaaagagtcttataattagggacggagggagtat 15190853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 15521943 - 15521980
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| | |||||||||||||||||||||||||    
T  15521943 tctcaaaagggttttataattagggacggagggagtat 15521980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 16440963 - 16440930
Alignment:
Q  25 aaaaggatcttataattagggacggagggagtat 58  Q
    |||||| |||||||||||||||||||||||||||    
T  16440963 aaaagggtcttataattagggacggagggagtat 16440930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 23260139 - 23260176
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  23260139 tctcaaaagggtcttataattagggacggaggtagtat 23260176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 25601061 - 25601098
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  25601061 tctcaaaagggtcttataattaggaacggagggagtat 25601098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 32147330 - 32147293
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||| | |||||||||||||||||||||||||||    
T  32147330 tctcaaaaaggtcttataattagggacggagggagtat 32147293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 40004182 - 40004149
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||||||||||| ||||||||||||||||||    
T  40004182 caaaaggatcttatatttagggacggagggagta 40004149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 3497801 - 3497837
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  3497801 tctcaaaagggtcttataattaggaacggagggagta 3497837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 13862996 - 13863032
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| || |||||||||||||||||||||||    
T  13862996 tctcaaaagggtcatataattagggacggagggagta 13863032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 15190587 - 15190551
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||||||||  ||||||||||||||||||||    
T  15190587 caaaaggatcttatatatagggacggagggagtatta 15190551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 19571940 - 19571976
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  19571940 tctcaaaagggtcttataattagggacggaggtagta 19571976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 23286475 - 23286511
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  23286475 tctcaaaagggtcttataattagggacggaggtagta 23286511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 32147555 - 32147595
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtattattta 64  Q
    ||||||| |||||||||||| ||||||||||||||| ||||    
T  32147555 caaaagggtcttataattagagacggagggagtatttttta 32147595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 40738442 - 40738410
Alignment:
Q  25 aaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||| ||||    
T  40738442 aaaaggatcttataattagggacggaggtagta 40738410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 43060412 - 43060448
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  43060412 tctcaaaagggtcttataattagggacggaggtagta 43060448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 17610021 - 17610060
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17610021 tctcaaaaggatcttataattagggacggagggagtatta 17610060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 24754114 - 24754077
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24754114 tctcaaaaggatcttataattagggacggagggagtat 24754077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 52978018 - 52977973
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatttatt 66  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||    
T  52978018 tctcaaaagggtcttataattagggacggagggagtaatatttatt 52977973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 6753561 - 6753525
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||||||||    
T  6753561 tctcaaaaggatcttataattagggacggagggagta 6753525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 28298372 - 28298412
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattat 61  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  28298372 tctcaaaaggatcttataattagggacggaggtagtattat 28298412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 52870680 - 52870636
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatttat 65  Q
    |||||||||| |||||||||||| |||||||||||||||||||||    
T  52870680 tctcaaaagggtcttataattagagacggagggagtattatttat 52870636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 33413554 - 33413512
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||| |||||||||||||||||||||||||| |||||    
T  33413554 tctcaaaagggtcttataattagggacggagggagtactattt 33413512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 45742807 - 45742845
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  45742807 tctcaaaagggtcttataattagggacggagggagtatt 45742845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 4035861 - 4035824
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  4035861 tctcaaaagggtcttataattagggacggagggagtat 4035824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 26889902 - 26889939
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||||||||||||||||||||||| |||||||    
T  26889902 tcaaaaggatcttataattagggacggaggtagtatta 26889939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 5375558 - 5375594
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  5375558 tctcaaaagggtcttataattagggacggagggagta 5375594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 5743660 - 5743696
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  5743660 tctcaaaagggtcttataattagggacggagggagta 5743696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 9328241 - 9328277
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  9328241 tctcaaaagggtcttataattagggacggagggagta 9328277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 10588111 - 10588075
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10588111 tctcaaaaggatgttataattagggacggagggagta 10588075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 19282082 - 19282118
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||| ||||||||    
T  19282082 tctcaaaaggatcttataattagggacgtagggagta 19282118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 20286024 - 20286064
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||||||||||||||||||||||| |||| |||||    
T  20286024 tcaaaaggatcttataattagggacggaggaagtactattt 20286064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 25124017 - 25123977
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattattt 63  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  25124017 tcaaaaggaccttataattagggacggaggtagtattattt 25123977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 26626003 - 26626039
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  26626003 tctcaaaagggtcttataattagggacggagggagta 26626039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 30771564 - 30771528
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  30771564 tctcaaaagggtcttataattagggacggagggagta 30771528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 32032994 - 32033030
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  32032994 tctcaaaagggtcttataattagggacggagggagta 32033030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 34273220 - 34273256
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  34273220 tctcaaaagggtcttataattagggacggagggagta 34273256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 36901111 - 36901147
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||| ||||    
T  36901111 tctcaaaaggatcttataattagggacggaggtagta 36901147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 39144436 - 39144404
Alignment:
Q  25 aaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||||    
T  39144436 aaaaggatcttataattagggacggagggagta 39144404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 44294825 - 44294789
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  44294825 tctcaaaagggtcttataattagggacggagggagta 44294789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 47806896 - 47806860
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  47806896 tctcaaaagggtcttataattagggacggagggagta 47806860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 50352100 - 50352064
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    ||||||||||||||||||||||| |||||||||||||    
T  50352100 tctcaaaaggatcttataattagagacggagggagta 50352064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 50533920 - 50533884
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| ||||||||||||||||||||||||||||    
T  50533920 tctcaaaatgatcttataattagggacggagggagta 50533884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 55632260 - 55632296
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    ||||||||||||||||||||||| |||||||||||||    
T  55632260 tctcaaaaggatcttataattagagacggagggagta 55632296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 3085479 - 3085444
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||||||||||||||||||||||| |||||    
T  3085479 tcaaaaggatcttataattagggacggaggtagtat 3085444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 20747434 - 20747469
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtatt 59  Q
    ||||||| ||||||||||||||||||||||||||||    
T  20747434 caaaagggtcttataattagggacggagggagtatt 20747469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 48030349 - 48030306
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattta 64  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||    
T  48030349 tctcaaaagggtcttataattagggatggagggagtatttttta 48030306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 52
Target Start/End: Complemental strand, 54623837 - 54623806
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagg 52  Q
    ||||||||||||||||||||||||||||||||    
T  54623837 tctcaaaaggatcttataattagggacggagg 54623806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 2615946 - 2615984
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  2615946 tctcaaaagggtcttatgattagggacggagggagtatt 2615984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 6807465 - 6807427
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  6807465 tctcaaaagggtcttataattagggacagagggagtatt 6807427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 13620857 - 13620891
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||| ||||    
T  13620857 tcaaaaggatcttataattagggacggaggtagta 13620891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 20391440 - 20391474
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| ||||||||||||||||||||||||||    
T  20391440 tcaaaagggtcttataattagggacggagggagta 20391474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 25708679 - 25708725
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatttattt 67  Q
    |||||||| | |||||||||||||||||||||||||| ||| |||||    
T  25708679 tctcaaaaaggtcttataattagggacggagggagtaatatatattt 25708725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 35675923 - 35675957
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| ||||||||||||||||||||||||||    
T  35675923 tcaaaagggtcttataattagggacggagggagta 35675957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 36391890 - 36391852
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  36391890 tctcaaaagggtcttataattaaggacggagggagtatt 36391852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 39114890 - 39114924
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||| ||||    
T  39114890 tcaaaaggatcttataattagggacggaggtagta 39114924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 45097166 - 45097204
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  45097166 tctcaaaagggtcttataattagggacggatggagtatt 45097204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 49793127 - 49793089
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  49793127 tctcaaaagggtcttataattagggacggaggtagtatt 49793089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 56432554 - 56432516
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  56432554 tctcaaaagggtcttataattagggacggaggtagtatt 56432516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 4036089 - 4036122
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  4036089 caaaagggtcttataattagggacggagggagta 4036122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 4416001 - 4415964
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  4416001 tctcaaaagggtcttataattagggacggaggtagtat 4415964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 4549662 - 4549629
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  4549662 caaaagggtcttataattagggacggagggagta 4549629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 6462691 - 6462728
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  6462691 tctcaaaagaatcttataattagggacggaggtagtat 6462728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 16545984 - 16546025
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatt 62  Q
    |||||||||||||||||||||| ||||||||| | |||||||    
T  16545984 tctcaaaaggatcttataattaaggacggaggtaatattatt 16546025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 20455182 - 20455219
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  20455182 tctcaaaagggtcttataattagggacggaggtagtat 20455219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 28501387 - 28501424
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  28501387 tctcaaaagggtcttataattagggacggaggtagtat 28501424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 29014097 - 29014064
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  29014097 caaaagggtcttataattagggacggagggagta 29014064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 31937112 - 31937071
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatt 62  Q
    |||||||||| ||||||||||||||||||||| |||| ||||    
T  31937112 tctcaaaagggtcttataattagggacggaggtagtactatt 31937071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 32899219 - 32899256
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  32899219 tctcaaaagggtcttataattagggacggaggtagtat 32899256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 46950028 - 46949991
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  46950028 tctcaaaagggtcttataattagggacggaggtagtat 46949991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 52
Target Start/End: Complemental strand, 47683123 - 47683094
Alignment:
Q  23 tcaaaaggatcttataattagggacggagg 52  Q
    ||||||||||||||||||||||||||||||    
T  47683123 tcaaaaggatcttataattagggacggagg 47683094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 55632032 - 55631999
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  55632032 caaaagggtcttataattagggacggagggagta 55631999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 1859180 - 1859144
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| | ||||||||||||||||||||||||||    
T  1859180 tctcaaaaaggtcttataattagggacggagggagta 1859144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 15241516 - 15241480
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||  ||||||||||||||||||||||||||    
T  15241516 tctcaaaagagtcttataattagggacggagggagta 15241480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 25124247 - 25124283
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  25124247 tctcaaaagggtcttataattagggacggaggtagta 25124283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 28495416 - 28495380
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  28495416 tctcaaaaggatcttataattagggacagaggtagta 28495380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 29427529 - 29427493
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| |||||||||||||||||| |||||||||    
T  29427529 tctcaaaaagatcttataattagggacagagggagta 29427493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 29520165 - 29520201
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  29520165 tctcaaaagggtcttataattagggacggaggtagta 29520201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 33501875 - 33501911
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  33501875 tcaaaaggatcttataattaggaacggatggagtatt 33501911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 43387994 - 43388030
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  43387994 tctcaaaagggtcttataattagggacggaggaagta 43388030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 47228729 - 47228765
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  47228729 tctcaaaagggtcttataattagggacggaggaagta 47228765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 49373694 - 49373730
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  49373694 tctcaaaagggtcttataattagggacggaggtagta 49373730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 53277190 - 53277222
Alignment:
Q  25 aaaaggatcttataattagggacggagggagta 57  Q
    |||||| ||||||||||||||||||||||||||    
T  53277190 aaaagggtcttataattagggacggagggagta 53277222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 53564357 - 53564393
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  53564357 tctcaaaagggtcttataattagggacggaggtagta 53564393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 53629828 - 53629792
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  53629828 tctcaaaagggtcttataattagggatggagggagta 53629792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 55563128 - 55563164
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  55563128 tctcaaaagggtcttataattagggacggaggtagta 55563164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 47676 - 47630
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatttattt 67  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||    
T  47676 tctcaaaagggtcttataattagggacggagggagtataatttattt 47630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 47904 - 47937
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||||||||||||||||||||||||||||||    
T  47904 caaaaggatcttataattagggacggagggagta 47937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 25197188 - 25197150
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25197188 tctcaaaaggatcttataattagggacggagggagtatt 25197150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 1730104 - 1730138
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||||||    
T  1730104 tcaaaaggatcttataattagggacggagggagta 1730138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 25045644 - 25045686
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||| ||||||||||||||||||||| ||||||||||    
T  25045644 tctcaaaagggtcttataattagggacggaggtagtattattt 25045686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 1779817 - 1779784
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||||||||||||||||||||||||||||||    
T  1779817 caaaaggatcttataattagggacggagggagta 1779784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 4844436 - 4844399
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  4844436 tctcaaaagggtcttataattagggacggagggagtat 4844399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 8743224 - 8743179
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatttatt 66  Q
    |||||||||| |||||||||||||||||||||||||| || |||||    
T  8743224 tctcaaaagggtcttataattagggacggagggagtagtaattatt 8743179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 9341874 - 9341837
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||||||||||||||||||||||||| |||||    
T  9341874 tctcaaaaggatcttataattagggacggaggtagtat 9341837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 30248683 - 30248646
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  30248683 tctcaaaagggtcttataattagggacggagggagtat 30248646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 231106 - 231142
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  231106 tctcaaaagggtcttataattagggacggagggagta 231142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 9388562 - 9388518
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtattatttatttg 68  Q
    ||||||| |||||||||||||||||||||||||| ||||| ||||    
T  9388562 caaaagggtcttataattagggacggagggagtagtatttttttg 9388518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 29036162 - 29036126
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||| ||||||||||||    
T  29036162 tctcaaaaggatcttataattaggaacggagggagta 29036126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 34301833 - 34301869
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  34301833 tctcaaaagggtcttataattagggacggagggagta 34301869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 12144043 - 12144078
Alignment:
Q  25 aaaaggatcttataattagggacggagggagtatta 60  Q
    |||||| |||||||||||||||||||||||||||||    
T  12144043 aaaagggtcttataattagggacggagggagtatta 12144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 13321329 - 13321368
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattatt 62  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  13321329 tcaaaagggtcttataattagggacggaggtagtattatt 13321368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 19097802 - 19097841
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  19097802 tctcaaaagggtcttataattagagacggagggagtatta 19097841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 23398141 - 23398176
Alignment:
Q  22 ctcaaaaggatcttataattagggacggagggagta 57  Q
    ||||||||| ||||||||||||||||||||||||||    
T  23398141 ctcaaaagggtcttataattagggacggagggagta 23398176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 9038676 - 9038642
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| ||||||||||||||||||||||||||    
T  9038676 tcaaaagggtcttataattagggacggagggagta 9038642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 9388792 - 9388834
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||| | ||||||||||||||||||||||||||| ||||    
T  9388792 tctcaaaaaggtcttataattagggacggagggagtatgattt 9388834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 11200630 - 11200592
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  11200630 tctcaaaaggctcttataattagggacggaggtagtatt 11200592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 11847835 - 11847869
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| ||||||||||||||||||||||||||    
T  11847835 tcaaaagggtcttataattagggacggagggagta 11847869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 15498665 - 15498627
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  15498665 tctcaaaagggtcttataattagggacggaggtagtatt 15498627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 23397904 - 23397870
Alignment:
Q  32 tcttataattagggacggagggagtattatttatt 66  Q
    |||||||||||||||||||||||||||| ||||||    
T  23397904 tcttataattagggacggagggagtattttttatt 23397870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 25024509 - 25024543
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    ||||||| |||||||||||||||||||||||||||    
T  25024509 tcaaaagaatcttataattagggacggagggagta 25024543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 34741730 - 34741764
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtat 58  Q
    ||||||| |||||||||||||||||||||||||||    
T  34741730 caaaagggtcttataattagggacggagggagtat 34741764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 34915544 - 34915582
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  34915544 tctcaaaagggtcttataattagggacggaggtagtatt 34915582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 402622 - 402659
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  402622 tctcaaaagggtcttataattagggacggaggtagtat 402659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 5457448 - 5457411
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||| | |||||||||||||||||||||||||||    
T  5457448 tctcaaaaaggtcttataattagggacggagggagtat 5457411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 11847603 - 11847570
Alignment:
Q  25 aaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||||||||||||||||||||| |||||    
T  11847603 aaaaggatcttataattagggacggaggaagtat 11847570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 13901677 - 13901640
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  13901677 tctcaaaagggtcttataattagggacggaggtagtat 13901640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 23604496 - 23604459
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  23604496 tctcaaaagggtcttataattagggacggaggtagtat 23604459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 287415 - 287451
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| | ||||||||||||||||||||||||||    
T  287415 tctcaaaaaggtcttataattagggacggagggagta 287451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 345132 - 345168
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtatta 60  Q
    ||||||||||||||||||||||||||| | |||||||    
T  345132 caaaaggatcttataattagggacggatgaagtatta 345168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 925934 - 925970
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  925934 tctcaaaagggtcttataattaggaacggagggagta 925970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 1780045 - 1780081
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    ||||||||||||||||||||||||||  |||||||||    
T  1780045 tctcaaaaggatcttataattagggatagagggagta 1780081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 2090694 - 2090658
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  2090694 tctcaaaagggtcttataattagggacggaggtagta 2090658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 10195994 - 10196030
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| |||||||||||| |||||||||||||    
T  10195994 tctcaaaagggtcttataattagagacggagggagta 10196030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 60
Target Start/End: Complemental strand, 12143804 - 12143776
Alignment:
Q  32 tcttataattagggacggagggagtatta 60  Q
    |||||||||||||||||||||||||||||    
T  12143804 tcttataattagggacggagggagtatta 12143776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 13011121 - 13011157
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  13011121 tctcaaaaggatcttataattaaggacggaggtagta 13011157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 13648130 - 13648166
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  13648130 tctcaaaagggtcttataattaaggacggagggagta 13648166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 16122517 - 16122553
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  16122517 tcaaaagggtcttataattagggacggaggtagtatt 16122553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 16272971 - 16273007
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  16272971 tcaaaagggtcttataattagggacggaggaagtatt 16273007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 32615025 - 32614989
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  32615025 tctcaaaaggttcttataattagggacggaggtagta 32614989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 33487869 - 33487833
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| | ||||||||||||||||||||||||||    
T  33487869 tctcaaaaaggtcttataattagggacggagggagta 33487833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 40529343 - 40529306
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40529343 tctcaaaaggatcttataattagggacggagggagtat 40529306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 13153964 - 13153924
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattat 61  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  13153964 tctcaaaagggtcttataattagggacggagggagtattat 13153924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 28572082 - 28572042
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattat 61  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  28572082 tctcaaaagggtcttataattagggacggagggagtattat 28572042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 28579675 - 28579635
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattat 61  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  28579675 tctcaaaagggtcttataattagggacggagggagtattat 28579635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 44502656 - 44502620
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||||||||    
T  44502656 tctcaaaaggatcttataattagggacggagggagta 44502620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 34568526 - 34568487
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  34568526 tctcaaaagggtcttataattagggacggagggagtatta 34568487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 28192176 - 28192218
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||| |||||||||||||||||||||||||| |||||    
T  28192176 tctcaaaagggtcttataattagggacggagggagtaatattt 28192218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 34490553 - 34490515
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  34490553 tctcaaaaagatcttataattagggacggagggagtatt 34490515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 8251934 - 8251971
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  8251934 tctcaaaagggtcttataattagggacggagggagtat 8251971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 12255127 - 12255090
Alignment:
Q  26 aaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||||||||||||||||||||||||| |||||    
T  12255127 aaaggatcttataattagggacggagggagtaatattt 12255090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 12260670 - 12260633
Alignment:
Q  26 aaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||||||||||||||||||||||||| |||||    
T  12260670 aaaggatcttataattagggacggagggagtaatattt 12260633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 18754180 - 18754143
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  18754180 tctcaaaagggtcttataattagggacggagggagtat 18754143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 32675758 - 32675795
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  32675758 tctcaaaagggtcttataattagggacggagggagtat 32675795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 51096 - 51132
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  51096 tctcaaaagggtcttataattagggacggagggagta 51132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 1774378 - 1774342
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  1774378 tctcaaaagggtcttataattagggacggagggagta 1774342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 2944273 - 2944309
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  2944273 tctcaaaagggtcttataattagggacggagggagta 2944309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 8951429 - 8951465
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  8951429 tctcaaaagggtcttataattagggacggagggagta 8951465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 14584132 - 14584176
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatttat 65  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||    
T  14584132 tctcaaaagggtcttataattaggaacggaggtagtattatttat 14584176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 14699488 - 14699452
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||| ||||    
T  14699488 tctcaaaaggatcttataattagggacggaggaagta 14699452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 33745896 - 33745932
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33745896 tctcaaaaggatcttataattaggaacggagggagta 33745932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 39029214 - 39029178
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  39029214 tctcaaaagggtcttataattagggacggagggagta 39029178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 41014540 - 41014504
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| ||||||||||||||||||||||||||||    
T  41014540 tctcaaaaagatcttataattagggacggagggagta 41014504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 17856779 - 17856814
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||| |||||||||||||||||||||||||||    
T  17856779 tcaaaagggtcttataattagggacggagggagtat 17856814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 26016603 - 26016568
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||| |||||||||||||||||||||||||||    
T  26016603 tcaaaagggtcttataattagggacggagggagtat 26016568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 44250892 - 44250857
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtatt 59  Q
    ||||||| ||||||||||||||||||||||||||||    
T  44250892 caaaagggtcttataattagggacggagggagtatt 44250857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 2944045 - 2944007
Alignment:
Q  25 aaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||| || |||||||||||||||||||||||||||||    
T  2944045 aaaagggtcctataattagggacggagggagtattattt 2944007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 62
Target Start/End: Complemental strand, 26990592 - 26990562
Alignment:
Q  32 tcttataattagggacggagggagtattatt 62  Q
    |||||||||||||||||||||||||||||||    
T  26990592 tcttataattagggacggagggagtattatt 26990562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 29279460 - 29279494
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtat 58  Q
    ||||||| |||||||||||||||||||||||||||    
T  29279460 caaaagggtcttataattagggacggagggagtat 29279494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 40530410 - 40530444
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtat 58  Q
    ||||||| |||||||||||||||||||||||||||    
T  40530410 caaaagggtcttataattagggacggagggagtat 40530444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 41898499 - 41898533
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||| ||||    
T  41898499 tcaaaaggatcttataattagggacggaggtagta 41898533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 42598716 - 42598754
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  42598716 tctcaaaaggatcttataattagagacgaagggagtatt 42598754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 42885088 - 42885054
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| ||||||||||||||||||||||||||    
T  42885088 tcaaaagggtcttataattagggacggagggagta 42885054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 44748464 - 44748506
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattt 63  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||    
T  44748464 tctcaaaagaatcttataattagggacggaggtagtatcattt 44748506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 2152241 - 2152278
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  2152241 tctcaaaagggtcttataattagggacggaggtagtat 2152278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 2786153 - 2786112
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatt 62  Q
    |||||||||||||||||||||  ||||||||| |||||||||    
T  2786153 tctcaaaaggatcttataattgaggacggaggtagtattatt 2786112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 5593457 - 5593420
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  5593457 tctcaaaagggtcttataattagggacggaaggagtat 5593420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 5784149 - 5784186
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  5784149 tctcaaaaagatcttataattagggacggaggtagtat 5784186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 11798869 - 11798902
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  11798869 caaaagggtcttataattagggacggagggagta 11798902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 12802647 - 12802610
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  12802647 tctcaaaagggtcttataattagggacggaggtagtat 12802610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 13154192 - 13154225
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  13154192 caaaagggtcttataattagggacggagggagta 13154225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 23688168 - 23688205
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  23688168 tcaaaagggtcttataattagggacggaggtagtatta 23688205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 26016831 - 26016868
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||| || ||||||||||||||||||||||||||    
T  26016831 tcaaaagggtcctataattagggacggagggagtatta 26016868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 29598260 - 29598223
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  29598260 tctcaaaagggtcttataattagagacggagggagtat 29598223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 35179634 - 35179593
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattattta 64  Q
    |||||||  ||||||||||||||||||||| |||||||||||    
T  35179634 tcaaaagagtcttataattagggacggaggtagtattattta 35179593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 36131252 - 36131297
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatttatt 66  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||    
T  36131252 tctcgaaaagatcttataattagggacggaggtagtatgatttatt 36131297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 39029439 - 39029480
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattattta 64  Q
    |||||||| || ||||||||||||||||||||||||| ||||    
T  39029439 tcaaaagggtcctataattagggacggagggagtatttttta 39029480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 43653976 - 43653943
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  43653976 caaaagggtcttataattagggacggagggagta 43653943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 43654204 - 43654241
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||  |||||||||||||||||||||||||||    
T  43654204 tctcaaaagagtcttataattagggacggagggagtat 43654241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 4076208 - 4076168
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattat 61  Q
    |||||||||||| ||||||||||||||| ||| ||||||||    
T  4076208 tctcaaaaggattttataattagggacgaaggaagtattat 4076168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 5162340 - 5162304
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  5162340 tctcaaaagggtcttataattagggacggaggtagta 5162304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 7758910 - 7758946
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||  ||||||||||||||||||||||||||    
T  7758910 tctcaaaagtgtcttataattagggacggagggagta 7758946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 8712049 - 8712081
Alignment:
Q  32 tcttataattagggacggagggagtattattta 64  Q
    |||||||||| ||||||||||||||||||||||    
T  8712049 tcttataatttgggacggagggagtattattta 8712081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 8948352 - 8948388
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  8948352 tctcaaaagggtcttataattagggacggatggagta 8948388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 9035540 - 9035576
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| | ||||||||||||||||||||||||||    
T  9035540 tctcaaaatggtcttataattagggacggagggagta 9035576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 11798641 - 11798605
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| |||||||||||||||| |||||||||    
T  11798641 tctcaaaagggtcttataattagggacagagggagta 11798605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 17069845 - 17069881
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  17069845 tctcaaaagggtcttataattagggacggaggtagta 17069881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 17578428 - 17578392
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  17578428 tctcaaaagggtcttataattagggacggaggtagta 17578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 18455752 - 18455720
Alignment:
Q  25 aaaaggatcttataattagggacggagggagta 57  Q
    |||||| ||||||||||||||||||||||||||    
T  18455752 aaaagggtcttataattagggacggagggagta 18455720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 18641381 - 18641417
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  18641381 tctcaaaagggtcttataattagggacggaggtagta 18641417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 18754410 - 18754450
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtattattta 64  Q
    |||||||||||||||  |||||||||| |||||||||||||    
T  18754410 caaaaggatcttatatatagggacggatggagtattattta 18754450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 23487098 - 23487058
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||| ||||||||||||||||||||| ||||| ||||    
T  23487098 tcaaaagggtcttataattagggacggaggtagtataattt 23487058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 36177104 - 36177140
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||  ||||||||||||||||||||||||||    
T  36177104 tctcaaaagagtcttataattagggacggagggagta 36177140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 38183567 - 38183602
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  38183567 tctcaaaagg-tcttataattagggacggagggagta 38183602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 38878757 - 38878721
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| |||||||||||| |||||||||||||    
T  38878757 tctcaaaagggtcttataattagagacggagggagta 38878721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 40741301 - 40741265
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| | ||||||||||||||||||||||||    
T  40741301 tctcaaaagggtattataattagggacggagggagta 40741265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 40784927 - 40784887
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattat 61  Q
    |||||||| | ||||||||||||||||||||| ||||||||    
T  40784927 tctcaaaaaggtcttataattagggacggaggtagtattat 40784887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 44251122 - 44251158
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| | ||||||||||||||||||||||||||    
T  44251122 tctcaaaatggtcttataattagggacggagggagta 44251158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 259123 - 259171
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatttatttgt 69  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||    
T  259123 tctcaaaagggtcttataattagggacggagggagtatttgttatttgt 259171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 39497469 - 39497429
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattat 61  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  39497469 tctcaaaagggtcttataattagggacggagggagtattat 39497429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 41855474 - 41855518
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatttat 65  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||    
T  41855474 tctcaaaagggtcttataattagggacggatggagtattatttat 41855518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 11741433 - 11741394
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  11741433 tctcaaaagggtcttataattagggacggagggagtatta 11741394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 30290301 - 30290258
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattta 64  Q
    |||||||||| |||||||||||||||||||||||||| ||||||    
T  30290301 tctcaaaagggtcttataattagggacggagggagtaatattta 30290258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 37951950 - 37951989
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  37951950 tctcaaaagggtcttataattagggacggagggagtatta 37951989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 50246930 - 50246968
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  50246930 tctcaaaaggatcttataattacggacggagggagtatt 50246968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 4102715 - 4102752
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  4102715 tctcaaaagggtcttataattagggacggagggagtat 4102752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 9202278 - 9202241
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtattat 61  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  9202278 caaaagggtcttataattagggacggagggagtattat 9202241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 22567102 - 22567065
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||||||||||||||||||||||||| |||||    
T  22567102 tctcaaaaggatcttataattagggacggaggtagtat 22567065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 44649665 - 44649624
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatt 62  Q
    |||||||||| |||||||||||||||||||||||||| ||||    
T  44649665 tctcaaaagggtcttataattagggacggagggagtaatatt 44649624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 45039448 - 45039411
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  45039448 tctcaaaagggtcttataattagggacggagggagtat 45039411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 46075868 - 46075909
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatt 62  Q
    |||||||||| |||||||||||||||||||||||||| ||||    
T  46075868 tctcaaaagggtcttataattagggacggagggagtagtatt 46075909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 50008484 - 50008521
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||| |||||||||||||||||||||||||||||    
T  50008484 tctcaaaatgatcttataattagggacggagggagtat 50008521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 52431175 - 52431212
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  52431175 tctcaaaagggtcttataattagggacggagggagtat 52431212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 943638 - 943674
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  943638 tctcaaaagggtcttataattagggacggagggagta 943674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 1039382 - 1039418
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  1039382 tctcaaaagggtcttataattagggacggagggagta 1039418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 1046288 - 1046324
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  1046288 tctcaaaagggtcttataattagggacggagggagta 1046324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 15811233 - 15811269
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  15811233 tctcaaaagggtcttataattagggacggagggagta 15811269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 23542015 - 23541979
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  23542015 tctcaaaagggtcttataattagggacggagggagta 23541979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 36694890 - 36694854
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  36694890 tctcaaaagggtcttataattagggacggagggagta 36694854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 36710991 - 36710955
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  36710991 tctcaaaagggtcttataattagggacggagggagta 36710955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 38920273 - 38920233
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  38920273 tcaaaagggtcttataattagggacggagggagtatgattt 38920233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 39363195 - 39363231
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  39363195 tctcaaaagggtcttataattagggacggagggagta 39363231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 49907057 - 49907021
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  49907057 tctcaaaagggtcttataattagggacggagggagta 49907021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 7763750 - 7763789
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatta 60  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  7763750 tctcaaaagggtcttataattagggacggaggtagtatta 7763789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 63
Target Start/End: Complemental strand, 30289627 - 30289596
Alignment:
Q  32 tcttataattagggacggagggagtattattt 63  Q
    ||||||||||||||||||||||||||||||||    
T  30289627 tcttataattagggacggagggagtattattt 30289596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 30289863 - 30289898
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagt 56  Q
    |||||||||| |||||||||||||||||||||||||    
T  30289863 tctcaaaagggtcttataattagggacggagggagt 30289898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 46075640 - 46075597
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtattatttattt 67  Q
    |||||||||||||||  ||||||||||| |||||||||||||||    
T  46075640 caaaaggatcttatatatagggacggagagagtattatttattt 46075597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 1048025 - 1047991
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtat 58  Q
    ||||||| |||||||||||||||||||||||||||    
T  1048025 caaaagggtcttataattagggacggagggagtat 1047991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 3934640 - 3934606
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||| ||||    
T  3934640 tcaaaaggatcttataattagggacggaggtagta 3934606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 16576095 - 16576133
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattat 61  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  16576095 tcaaaagagtcttataattagggacggagggagtattat 16576133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 25509245 - 25509203
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||    
T  25509245 tctcaaaagggtcttataattagggacggaggtagtataattt 25509203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 39362967 - 39362933
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtat 58  Q
    ||||||| |||||||||||||||||||||||||||    
T  39362967 caaaagggtcttataattagggacggagggagtat 39362933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 39750154 - 39750120
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtat 58  Q
    ||||||| |||||||||||||||||||||||||||    
T  39750154 caaaagggtcttataattagggacggagggagtat 39750120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 1048252 - 1048288
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  1048252 tctcaaaaggatcttataa-tagggacggagggagtat 1048288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 13343809 - 13343776
Alignment:
Q  21 tctcaaaaggatcttataattagggacggaggga 54  Q
    |||||||||| |||||||||||||||||||||||    
T  13343809 tctcaaaagggtcttataattagggacggaggga 13343776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 15763347 - 15763310
Alignment:
Q  26 aaaggatcttataattagggacggagggagtattattt 63  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  15763347 aaaggatcttataatcagggacggaggtagtattattt 15763310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 23542243 - 23542276
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  23542243 caaaagggtcttataattagggacggagggagta 23542276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 25284070 - 25284111
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattattta 64  Q
    ||||||||||| |||||||||||||||||| |||| ||||||    
T  25284070 tcaaaaggatcctataattagggacggaggtagtaatattta 25284111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 27037305 - 27037268
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  27037305 tctcaaaagggtcttataattagggacggaggtagtat 27037268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 37850440 - 37850477
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  37850440 tctcaaaaggatcttataattagggacagaggtagtat 37850477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 39497697 - 39497730
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  39497697 caaaagggtcttataattagggacggagggagta 39497730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 42276162 - 42276199
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  42276162 tctcaaaagggtcttataattagggacggaggtagtat 42276199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 44646535 - 44646568
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  44646535 caaaagggtcttataattagggacggagggagta 44646568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 44649893 - 44649926
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  44649893 caaaagggtcttataattagggacggagggagta 44649926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 52602023 - 52601990
Alignment:
Q  25 aaaaggatcttataattagggacggagggagtat 58  Q
    |||||| |||||||||||||||||||||||||||    
T  52602023 aaaagggtcttataattagggacggagggagtat 52601990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 7784027 - 7783991
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| | ||||||||||||||||||||||||    
T  7784027 tctcaaaagggtattataattagggacggagggagta 7783991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 8104291 - 8104327
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatt 59  Q
    ||||| || ||||||||||||||||||||||||||||    
T  8104291 tcaaaggggtcttataattagggacggagggagtatt 8104327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 14090025 - 14089981
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattatttattt 67  Q
    ||||||||||||||||||||  ||||||| |||||||| ||||||    
T  14090025 tcaaaaggatcttataattaaagacggagagagtattagttattt 14089981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 14171578 - 14171542
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| |||||||||||| |||||||||||||    
T  14171578 tctcaaaagggtcttataattagagacggagggagta 14171542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 15302747 - 15302787
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||||||||||||||||||| ||||| ||||| ||||    
T  15302747 tcaaaaggatcttataattagggatggaggtagtatcattt 15302787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 16456672 - 16456636
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  16456672 tctcagaagggtcttataattagggacggagggagta 16456636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 17483767 - 17483731
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  17483767 tcaaaagggtcttataattagggacggaggtagtatt 17483731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 39750382 - 39750418
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| |||||||||||||||| |||||||||    
T  39750382 tctcaaaagggtcttataattagggacagagggagta 39750418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 43456622 - 43456658
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  43456622 tctcaaaagggtcttataattagggacggaggtagta 43456658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 45335921 - 45335885
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  45335921 tctcaaaagggtcttataattagggagggagggagta 45335885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 47069052 - 47069088
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtatta 60  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  47069052 caaaagggtcttataattagggacggatggagtatta 47069088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 51467475 - 51467503
Alignment:
Q  23 tcaaaaggatcttataattagggacggag 51  Q
    |||||||||||||||||||||||||||||    
T  51467475 tcaaaaggatcttataattagggacggag 51467503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 9427 - 9465
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  9427 tctcaaaaggatcttataattagggacggaggtagtatt 9465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 6613 - 6654
Alignment:
Q  24 caaaaggatcttataattagggacggagggagtattatttat 65  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  6613 caaaagggtcttataattagggacggaggtagtattatttat 6654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 12101 - 12064
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  12101 tctcaaaagggtcttataattagggacggagggagtat 12064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 24631 - 24668
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||||||||||||||||| |||||||||||||    
T  24631 tctcaaaaggatcttataattaggaacggagggagtat 24668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 51683 - 51720
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||||| |||||||||||||||||||||||||||    
T  51683 tctcaaaagggtcttataattagggacggagggagtat 51720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 3783 - 3819
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||||||||    
T  3783 tctcaaaagggtcttataattagggacggagggagta 3819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 117882 - 117846
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||||||||||||||||||||||||| ||||    
T  117882 tctcaaaaggatcttataattagggacggaggaagta 117846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 355334 - 355369
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtat 58  Q
    |||||||| |||||||||||||||||||||||||||    
T  355334 tcaaaagggtcttataattagggacggagggagtat 355369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 65638 - 65676
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  65638 tctcaaaaaggtcttataattagggacggagggagtatt 65676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 65411 - 65378
Alignment:
Q  24 caaaaggatcttataattagggacggagggagta 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  65411 caaaagggtcttataattagggacggagggagta 65378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 48690 - 48645
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagtattatttatt 66  Q
    |||||||||| ||||||||||||||||||||| ||||  |||||||    
T  48690 tctcaaaagggtcttataattagggacggaggtagtaacatttatt 48645  T

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Target: scaffold0107; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 48917 - 48953
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatt 59  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  48917 tcaaaaggatcctataattagggacggaggtagtatt 48953  T

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Target: scaffold0674 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 5187 - 5151
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  5187 tctcaaaagggtcttataattagggacggaggtagta 5151  T

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Target: scaffold0549 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 10183 - 10219
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  10183 tctcaaaagggtcttataattagggacggaggtagta 10219  T

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Target: scaffold0457 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 4664 - 4700
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  4664 tctcaaaagaatcttataattagggacggaggtagta 4700  T

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Target: scaffold0339 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 7141 - 7177
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  7141 tctcaaaagggtcttataattagggacggaggaagta 7177  T

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Target: scaffold0308 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 14349 - 14385
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  14349 tctcaaaagggtcttataattaaggacggagggagta 14385  T

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Target: scaffold0240 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 18533 - 18497
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  18533 tctcaaaagggtcttataattagggacggaggtagta 18497  T

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Target: scaffold0236 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 51
Target Start/End: Complemental strand, 17498 - 17470
Alignment:
Q  23 tcaaaaggatcttataattagggacggag 51  Q
    |||||||||||||||||||||||||||||    
T  17498 tcaaaaggatcttataattagggacggag 17470  T

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Target: scaffold0163 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 1449 - 1485
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  1449 tcaaaagggtcttataattagggacggaggtagtatt 1485  T

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Target: scaffold0161 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 3474 - 3438
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  3474 tctcaaaagggtcttataattagggacggaggtagta 3438  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 104062 - 104098
Alignment:
Q  21 tctcaaaaggatcttataattagggacggagggagta 57  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  104062 tctcaaaaagatcttataattagggacggaggtagta 104098  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 164248 - 164212
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtatt 59  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  164248 tcaaaagggtcttataattagggacggaggtagtatt 164212  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 246490 - 246450
Alignment:
Q  23 tcaaaaggatcttataattagggacggagggagtattattt 63  Q
    |||||||| ||||||||||||| ||||||| ||||||||||    
T  246490 tcaaaagggtcttataattaggaacggaggtagtattattt 246450  T

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