View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17343_high_10 (Length: 456)

Name: NF17343_high_10
Description: NF17343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17343_high_10
NF17343_high_10
[»] chr6 (10 HSPs)
chr6 (7-439)||(17540291-17540721)
chr6 (45-269)||(15304190-15304409)
chr6 (94-218)||(15308153-15308277)
chr6 (94-218)||(15313447-15313571)
chr6 (284-439)||(34010937-34011095)
chr6 (286-439)||(34013755-34013911)
chr6 (285-389)||(14494169-14494272)
chr6 (338-393)||(19294653-19294707)
chr6 (285-327)||(19294701-19294743)
chr6 (338-421)||(12844196-12844282)
[»] chr7 (2 HSPs)
chr7 (285-440)||(22291082-22291240)
chr7 (338-426)||(44572314-44572405)
[»] chr2 (5 HSPs)
chr2 (285-361)||(41849343-41849419)
chr2 (298-415)||(34409326-34409446)
chr2 (285-361)||(17651605-17651681)
chr2 (338-389)||(26576391-26576441)
chr2 (285-327)||(26576435-26576477)
[»] chr4 (3 HSPs)
chr4 (284-439)||(55680954-55681113)
chr4 (338-421)||(54305911-54305998)
chr4 (311-360)||(24663033-24663082)
[»] chr3 (2 HSPs)
chr3 (285-361)||(43921667-43921743)
chr3 (280-361)||(27044351-27044432)
[»] chr8 (2 HSPs)
chr8 (279-420)||(18393289-18393434)
chr8 (297-361)||(27402646-27402710)
[»] chr1 (1 HSPs)
chr1 (297-361)||(30882702-30882766)


Alignment Details
Target: chr6 (Bit Score: 340; Significance: 0; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 7 - 439
Target Start/End: Complemental strand, 17540721 - 17540291
Alignment:
Q  7 gttgcacaactggataaggttgttg---aagcagggcagatgaatgaagaatatgaggaacaacaatttggaaaaaatatggttgttcctgaagaaatgg 103  Q
    |||||||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17540721 gttgcacaactggataaggttgttgttgaagaagggcagatgaatgaagaatatgaggaacaacaagttggaaaaaatatggttgttcctgaagaaatgg 17540622  T
Q  104 tgcaagaacaggtacttacattattgcattttttattaacaaaactg-taagtgtaacccttgagtcaataatgcaatatttatttatttattgtagcct 202  Q
    |||||||||||||||||| ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17540621 tgcaagaacaggtacttagattattgcattttttgttaacaatactgttaagtgtaacccttgagtcaataatgcaatatttatttatttattgtagcct 17540522  T
Q  203 gtaattgctgggaacactgttgaacttgaacatattcatgatcatgcagaagcacatgcccagccagaaagagtttataacatatgaagcacatacacct 302  Q
    |||||||||||||||||||      ||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  17540521 gtaattgctgggaacactg------ttgaacatattcatgatcatgcagaagcacatgccaagccggtaagagtttataacatatgaagcacatacacct 17540428  T
Q  303 ctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccggtgtccaaataatgtttt 402  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17540427 ctaggattagacgtgtcgcagtgtccgatacgcatcggtgtccgacactcctatgacaccgcgtacaacacgagtcgaaccggtgtccaaataatgtttt 17540328  T
Q  403 tctttacttcgactctccttcgattggtatctgacac 439  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  17540327 tctttactttgactctccttcgatcggtatctgacac 17540291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 45 - 269
Target Start/End: Original strand, 15304190 - 15304409
Alignment:
Q  45 gaatgaagaatatgaggaacaacaatttggaaaaaatatggttgttcctgaagaaatggtgcaagaacaggtacttacattattgcatttttt-attaac 143  Q
    ||||||||||| ||| ||||||||| || ||| ||||||| ||| | |||||||||| |||||||||||||||| || ||||||||||||||| | ||||    
T  15304190 gaatgaagaatctgatgaacaacaagttagaagaaatatgattgatgctgaagaaattgtgcaagaacaggtacctagattattgcatttttttactaac 15304289  T
Q  144 aaaactgtaagtgtaacccttgagtcaataatgcaatatttatttatttattgtagcctgtaattgctgggaacactgttgaacttgaacatattcatga 243  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||||||||| ||||| ||||||||||||||||||      ||||||||||||||||    
T  15304290 aaaactataagtgtaacccttgagtcaataatacaagatttatttatttattgcagcctataattgctgggaacactg------ttgaacatattcatga 15304383  T
Q  244 tcatgcagaagcacatgcccagccag 269  Q
    ||||||||||| ||||||||| ||||    
T  15304384 tcatgcagaagaacatgcccaaccag 15304409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 15308277 - 15308153
Alignment:
Q  94 gaagaaatggtgcaagaacaggtacttacattattgcattttttattaacaaaactgtaagtgtaacccttgagtcaataatgcaatatttatttattta 193  Q
    ||||||||||||||||||| |||||||| | | |||||||||||| |||| ||| | |||||||||||||||||| |||||| ||| ||||| |||||||    
T  15308277 gaagaaatggtgcaagaactggtacttagagtgttgcattttttactaactaaattataagtgtaacccttgagtaaataatacaagatttaattattta 15308178  T
Q  194 ttgtagcctgtaattgctgggaaca 218  Q
     ||||||||||||||| || |||||    
T  15308177 atgtagcctgtaattgttgcgaaca 15308153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 15313571 - 15313447
Alignment:
Q  94 gaagaaatggtgcaagaacaggtacttacattattgcattttttattaacaaaactgtaagtgtaacccttgagtcaataatgcaatatttatttattta 193  Q
    ||||||||||||||||||| |||||||| | | |||||||||||| |||| ||| | |||||||||||||||||| |||||| ||| ||||| |||||||    
T  15313571 gaagaaatggtgcaagaactggtacttagagtgttgcattttttactaactaaattataagtgtaacccttgagtaaataatacaagatttaattattta 15313472  T
Q  194 ttgtagcctgtaattgctgggaaca 218  Q
     ||||||||||||||| || |||||    
T  15313471 atgtagcctgtaattgttgcgaaca 15313447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 439
Target Start/End: Original strand, 34010937 - 34011095
Alignment:
Q  284 atatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtcgaacc 383  Q
    |||||||||||  ||||||| |||| ||| |||||||||||||| || |||| ||||||||| ||||||| |||||||   || | ||||| ||||||||    
T  34010937 atatgaagcacggacacctcaaggactaggcgtgtcgcggtgtccgacacgcgtcggtgtccgacactccaatgacactt-gtgcgacacgtgtcgaacc 34011035  T
Q  384 ggtgtcc-aaataatg---tttttctttacttcgactctccttcgattggtatctgacac 439  Q
    ||||||| |||||||    ||||||||||||||||| ||||| |||||||| || |||||    
T  34011036 ggtgtcctaaataattgtttttttctttacttcgacactcctacgattggtgtccgacac 34011095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 439
Target Start/End: Complemental strand, 34013911 - 34013755
Alignment:
Q  286 atgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccgg 385  Q
    |||||||||  ||||||| |||| ||| |||||||||||||| || | || ||||||||| ||||||| |||||| |  |||| ||||| ||||||||||    
T  34013911 atgaagcacggacacctcaaggactaggcgtgtcgcggtgtccgacaagcgtcggtgtccgacactccaatgaca-cttgtacgacacgtgtcgaaccgg 34013813  T
Q  386 tgtcc-aaataa---tgtttttctttacttcgactctccttcgattggtatctgacac 439  Q
    ||||| ||||||   | ||||||||||||||||| ||||| |||||||| || |||||    
T  34013812 tgtcctaaataattgtttttttctttacttcgacactcctacgattggtgtccgacac 34013755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 389
Target Start/End: Original strand, 14494169 - 14494272
Alignment:
Q  285 tatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccg 384  Q
    ||||||||||  |||||||||||| |||||||||| |||| || || |||| |||  |||| |||||||||||||||| ||||| ||||| ||||||||     
T  14494169 tatgaagcacggacacctctaggactagacgtgtcacggtatccgacacgcgtcgaggtccgacactcctatgacacc-cgtacgacacgtgtcgaacca 14494267  T
Q  385 gtgtc 389  Q
    |||||    
T  14494268 gtgtc 14494272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 393
Target Start/End: Complemental strand, 19294707 - 19294653
Alignment:
Q  338 cggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccggtgtccaaa 393  Q
    |||||||| |||||||| ||||||| ||||| ||||| ||||||||||||||||||    
T  19294707 cggtgtccgacactcctgtgacacc-cgtacgacacgtgtcgaaccggtgtccaaa 19294653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 327
Target Start/End: Complemental strand, 19294743 - 19294701
Alignment:
Q  285 tatgaagcacatacacctctaggattagacgtgtcgcggtgtc 327  Q
    ||||||||||  |||||||||||||||| ||||||||||||||    
T  19294743 tatgaagcaccgacacctctaggattaggcgtgtcgcggtgtc 19294701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 421
Target Start/End: Complemental strand, 12844282 - 12844196
Alignment:
Q  338 cggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccggtgtcc-aaataatg---tttttctttacttcgactctcct 421  Q
    |||||||| |||||||||| |||||  |||| ||||| ||||||||||||||| |||||||    ||||||||||||||||| |||||    
T  12844282 cggtgtccgacactcctataacacct-gtacgacacgtgtcgaaccggtgtcctaaataattggttttttctttacttcgacactcct 12844196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 440
Target Start/End: Complemental strand, 22291240 - 22291082
Alignment:
Q  285 tatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccg 384  Q
    ||||||||||  | |||||||||| ||| | |||||| ||||| || |||| ||||||||| |||||||||||||||| ||||| ||||| || ||||||    
T  22291240 tatgaagcacggaaacctctaggactaggcatgtcgcagtgtccgacacgcgtcggtgtccgacactcctatgacacc-cgtaccacacgtgttgaaccg 22291142  T
Q  385 gtgtcc-aaataa---tgtttttctttacttcgactctccttcgattggtatctgacacg 440  Q
    |||||| ||||||   | ||||||||||||||||| ||||| |||| |||||| ||||||    
T  22291141 gtgtcctaaataattgtttttttctttacttcgacactcctacgatcggtatccgacacg 22291082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 426
Target Start/End: Original strand, 44572314 - 44572405
Alignment:
Q  338 cggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccggtgtcc-aaata---atgtttttctttacttcgactctccttcgat 426  Q
    |||||||| |||||||||||||| | ||||| ||||| ||||||||||||||| |||||   || ||||||||||||||||| ||||| ||||    
T  44572314 cggtgtccgacactcctatgaca-ctcgtacgacacgtgtcgaaccggtgtcctaaatacttatttttttctttacttcgacactcctacgat 44572405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 41849419 - 41849343
Alignment:
Q  285 tatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacac 361  Q
    ||||||||||  |||||||||| ||||| |||||||||||||| || |||| ||||||||| |||||||||||||||    
T  41849419 tatgaagcacggacacctctagaattaggcgtgtcgcggtgtcagacacgcgtcggtgtccgacactcctatgacac 41849343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 415
Target Start/End: Original strand, 34409326 - 34409446
Alignment:
Q  298 cacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccggtgtcc-aaataa 396  Q
    ||||||||||| ||| |||||||||||||| || |||| | | ||||| |||||||||||| ||| ||||| ||||| ||| ||||||||||| ||||||    
T  34409326 cacctctaggactaggcgtgtcgcggtgtcggacacgcgttgatgtccgacactcctatgatacc-cgtacgacacgtgtcaaaccggtgtcctaaataa 34409424  T
Q  397 ---tgtttttctttacttcgac 415  Q
       | |||||||||||||||||    
T  34409425 ttgtttttttctttacttcgac 34409446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 17651681 - 17651605
Alignment:
Q  285 tatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacac 361  Q
    ||||||||||  |||||| ||||||||| |||||||||||||| || |||| || |||||| |||||| ||||||||    
T  17651681 tatgaagcacggacacctttaggattaggcgtgtcgcggtgtccgacacgcgtcagtgtccgacactcttatgacac 17651605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 26576441 - 26576391
Alignment:
Q  338 cggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccggtgtc 389  Q
    |||||||| |||||||||||||||| ||||| ||||| ||||||||||||||    
T  26576441 cggtgtccgacactcctatgacacc-cgtacgacacgtgtcgaaccggtgtc 26576391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 327
Target Start/End: Complemental strand, 26576477 - 26576435
Alignment:
Q  285 tatgaagcacatacacctctaggattagacgtgtcgcggtgtc 327  Q
    ||||||||||  |||||||||||| ||||||||||||||||||    
T  26576477 tatgaagcacggacacctctaggactagacgtgtcgcggtgtc 26576435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 7e-16; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 284 - 439
Target Start/End: Complemental strand, 55681113 - 55680954
Alignment:
Q  284 atatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtcgaacc 383  Q
    |||||||||||  ||||||| |||| ||| |||||||||||||| || |||| ||||||||| |||||||||||||| |  |||| ||||  ||||||||    
T  55681113 atatgaagcacggacacctcgaggactaggcgtgtcgcggtgtccgacacgcgtcggtgtccgacactcctatgaca-cttgtacgacacatgtcgaacc 55681015  T
Q  384 ggtgtcc-aaataa----tgtttttctttacttcgactctccttcgattggtatctgacac 439  Q
    | ||||| ||||||    | ||||||||||||||||| ||||| |||| ||| || |||||    
T  55681014 gctgtcctaaataattgttttttttctttacttcgacactcctacgatcggtgtccgacac 55680954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 421
Target Start/End: Complemental strand, 54305998 - 54305911
Alignment:
Q  338 cggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccggtgtcc-aaataa-tgtttt---tctttacttcgactctcct 421  Q
    |||||||| |||||||||||||||| ||||| ||||| ||||||||| ||||| |||||| ||||||   ||||||||||||| |||||    
T  54305998 cggtgtccgacactcctatgacacc-cgtacgacacgtgtcgaaccgatgtcctaaataattgttttttgtctttacttcgacactcct 54305911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 24663082 - 24663033
Alignment:
Q  311 agacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgaca 360  Q
    ||||||||||||||||| ||||| ||||| | |||||||||| |||||||    
T  24663082 agacgtgtcgcggtgtccgatacacatcgatttccaacactcatatgaca 24663033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 361
Target Start/End: Original strand, 43921667 - 43921743
Alignment:
Q  285 tatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacac 361  Q
    ||||||||||  |||||||||||| ||| |||||| ||||||| || |||| ||||||||| |||||||||||||||    
T  43921667 tatgaagcacggacacctctaggactagccgtgtcacggtgtccgacacgcttcggtgtccgacactcctatgacac 43921743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 27044432 - 27044351
Alignment:
Q  280 taacatatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacac 361  Q
    |||||||||||||||| ||||||||   | ||||||||| || ||||| || |||| ||||||| | ||| |||||||||||    
T  27044432 taacatatgaagcacagacacctcttaaactagacgtgttgcagtgtcagacacgcgtcggtgttcgacagtcctatgacac 27044351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 420
Target Start/End: Original strand, 18393289 - 18393434
Alignment:
Q  279 ataacatatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtc 378  Q
    ||||| ||||||||||| |||||||||||||||| ||| |||  |||||||| | |  | ||||| | |||||||||||||| | ||||| ||||| |||    
T  18393289 ataacctatgaagcacaaacacctctaggattaggcgtttcggagtgtctgacatgtgtaggtgttcgacactcctatgaca-ctcgtacgacacgtgtc 18393387  T
Q  379 gaaccggtgtcc-aaataa--tgtttt--tctttacttcgactctcc 420  Q
    ||||  |||||| ||||||  ||||||  ||||||||||||| ||||    
T  18393388 gaactagtgtcctaaataatttgttttcatctttacttcgacactcc 18393434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 361
Target Start/End: Complemental strand, 27402710 - 27402646
Alignment:
Q  297 acacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacac 361  Q
    |||||||||||||||| ||||| | ||||||||| |||  ||||||||| |||||||| ||||||    
T  27402710 acacctctaggattaggcgtgttgtggtgtctgacacgtgtcggtgtccgacactcctttgacac 27402646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 361
Target Start/End: Original strand, 30882702 - 30882766
Alignment:
Q  297 acacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacac 361  Q
    ||||||||| |||||| |||||||||||||| || || ||||||||||  |||||| || |||||    
T  30882702 acacctctaagattaggcgtgtcgcggtgtcggacacacatcggtgtctgacactcgtacgacac 30882766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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