View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17343_high_40 (Length: 241)
Name: NF17343_high_40
Description: NF17343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17343_high_40 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 2753623 - 2753847
Alignment:
| Q |
1 |
tacatatgtacaccttaagtgatgataaactcagagatgttagcatgaaaatgaattaaatttctttatcaaagttagtgagatgtgagcaccctcatat |
100 |
Q |
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| T |
2753623 |
tacatatgtacaccttaagtgatgataaactcagagatgttagcatgaaaatgaattaaatttctttatcaaagttagtgagatgtgagcaccctcatat |
2753722 |
T |
|
| Q |
101 |
attttacttataattgagagctgacaattgcatataactctattgattcaaacaaaatttgttttcttgatatgtccccatcatttaatcttttccctat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2753723 |
attttacttataattgagagctgacaattgcatataactctattgattcaaacaaaatttgttttcttgatatgtccccatcatttaatcttttccctat |
2753822 |
T |
|
| Q |
201 |
aaacatttttgttacatgactacat |
225 |
Q |
| |
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||||||||||||||||||||||||| |
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| T |
2753823 |
aaacatttttgttacatgactacat |
2753847 |
T |
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