View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17343_high_43 (Length: 237)

Name: NF17343_high_43
Description: NF17343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17343_high_43
NF17343_high_43
[»] chr8 (35 HSPs)
chr8 (1-237)||(39210842-39211077)
chr8 (65-165)||(36779439-36779539)
chr8 (118-198)||(19649200-19649281)
chr8 (91-170)||(29970845-29970924)
chr8 (104-172)||(35239539-35239608)
chr8 (104-165)||(38516346-38516407)
chr8 (91-170)||(31246301-31246381)
chr8 (102-165)||(20190187-20190250)
chr8 (99-165)||(39219769-39219836)
chr8 (104-170)||(1373082-1373148)
chr8 (61-146)||(40792160-40792246)
chr8 (102-170)||(26490976-26491045)
chr8 (96-164)||(10552901-10552969)
chr8 (120-170)||(2764413-2764463)
chr8 (116-170)||(22936805-22936859)
chr8 (104-170)||(33588763-33588829)
chr8 (85-165)||(3467581-3467662)
chr8 (104-165)||(38715209-38715270)
chr8 (117-161)||(14930230-14930274)
chr8 (91-170)||(24897574-24897653)
chr8 (91-142)||(28425458-28425510)
chr8 (118-170)||(43550934-43550986)
chr8 (63-137)||(27649821-27649896)
chr8 (101-168)||(40991571-40991638)
chr8 (91-165)||(1836127-1836201)
chr8 (116-170)||(40742167-40742221)
chr8 (116-165)||(3097218-3097267)
chr8 (91-164)||(10368062-10368135)
chr8 (91-143)||(25497761-25497814)
chr8 (104-165)||(35495086-35495147)
chr8 (104-165)||(41891819-41891880)
chr8 (118-170)||(15206739-15206791)
chr8 (91-142)||(30081637-30081689)
chr8 (158-198)||(35239487-35239527)
chr8 (102-145)||(38386432-38386476)
[»] scaffold0172 (1 HSPs)
scaffold0172 (61-199)||(15214-15352)
[»] chr2 (34 HSPs)
chr2 (61-199)||(12110889-12111027)
chr2 (59-199)||(1763234-1763375)
chr2 (99-188)||(23359922-23360013)
chr2 (61-170)||(3853944-3854054)
chr2 (89-170)||(5055213-5055294)
chr2 (99-198)||(29844192-29844292)
chr2 (86-175)||(18511141-18511231)
chr2 (89-170)||(45000421-45000503)
chr2 (86-170)||(1945018-1945103)
chr2 (92-164)||(6767772-6767844)
chr2 (117-165)||(10918652-10918700)
chr2 (61-137)||(32596099-32596175)
chr2 (116-170)||(38600453-38600507)
chr2 (105-166)||(4007132-4007193)
chr2 (86-170)||(34433285-34433370)
chr2 (62-170)||(39141425-39141533)
chr2 (86-165)||(30007532-30007612)
chr2 (91-165)||(16467135-16467210)
chr2 (118-188)||(23377529-23377600)
chr2 (91-170)||(40704671-40704750)
chr2 (104-170)||(11759787-11759853)
chr2 (116-170)||(26806265-26806319)
chr2 (86-170)||(2213550-2213635)
chr2 (86-146)||(5916221-5916282)
chr2 (104-145)||(6737683-6737724)
chr2 (86-170)||(9988480-9988565)
chr2 (101-170)||(15220786-15220855)
chr2 (102-170)||(30599899-30599968)
chr2 (85-137)||(31562665-31562718)
chr2 (86-146)||(36312344-36312405)
chr2 (116-165)||(42089538-42089587)
chr2 (91-139)||(9143097-9143145)
chr2 (86-134)||(12850720-12850768)
chr2 (91-139)||(15928373-15928421)
[»] chr1 (40 HSPs)
chr1 (64-190)||(47981756-47981883)
chr1 (91-198)||(4347004-4347112)
chr1 (61-165)||(40352455-40352559)
chr1 (91-165)||(13344837-13344911)
chr1 (61-170)||(25061285-25061395)
chr1 (99-198)||(5930790-5930891)
chr1 (86-164)||(29438648-29438726)
chr1 (86-170)||(20800259-20800344)
chr1 (86-170)||(35569184-35569269)
chr1 (63-170)||(5410698-5410806)
chr1 (91-165)||(40642993-40643067)
chr1 (64-137)||(30557626-30557699)
chr1 (91-168)||(7335866-7335944)
chr1 (61-172)||(7765241-7765352)
chr1 (91-168)||(41986-42064)
chr1 (85-170)||(1199886-1199972)
chr1 (116-170)||(13056056-13056110)
chr1 (91-165)||(45557398-45557471)
chr1 (118-170)||(29759710-29759762)
chr1 (101-164)||(31957923-31957987)
chr1 (118-170)||(34718510-34718562)
chr1 (117-161)||(47978375-47978419)
chr1 (118-170)||(48510967-48511019)
chr1 (91-169)||(5268311-5268390)
chr1 (91-174)||(36447664-36447747)
chr1 (94-144)||(4887845-4887895)
chr1 (85-170)||(10470649-10470734)
chr1 (116-170)||(15884286-15884340)
chr1 (116-170)||(31223433-31223487)
chr1 (104-169)||(49178235-49178301)
chr1 (116-170)||(49242995-49243049)
chr1 (116-169)||(11561882-11561935)
chr1 (121-162)||(18325053-18325094)
chr1 (85-165)||(27801633-27801714)
chr1 (118-167)||(32365141-32365190)
chr1 (117-170)||(42850233-42850286)
chr1 (104-164)||(47085898-47085959)
chr1 (102-165)||(4369801-4369864)
chr1 (131-163)||(31844215-31844247)
chr1 (91-142)||(40229457-40229509)
[»] chr4 (54 HSPs)
chr4 (100-198)||(22699733-22699833)
chr4 (100-198)||(22980697-22980797)
chr4 (100-198)||(22994284-22994384)
chr4 (99-182)||(46958030-46958115)
chr4 (91-170)||(54488625-54488705)
chr4 (91-170)||(38740289-38740368)
chr4 (114-163)||(22694607-22694656)
chr4 (104-199)||(40335606-40335703)
chr4 (61-135)||(1616515-1616589)
chr4 (61-170)||(14564102-14564212)
chr4 (104-165)||(36150629-36150691)
chr4 (61-170)||(51922960-51923070)
chr4 (61-170)||(5025549-5025658)
chr4 (86-170)||(16566325-16566410)
chr4 (104-165)||(29778982-29779043)
chr4 (86-170)||(39187754-39187839)
chr4 (101-165)||(2341453-2341517)
chr4 (62-162)||(5835778-5835878)
chr4 (117-165)||(28947762-28947810)
chr4 (91-170)||(38306031-38306111)
chr4 (91-170)||(39000534-39000613)
chr4 (94-164)||(42944887-42944958)
chr4 (91-158)||(43868239-43868306)
chr4 (104-165)||(48550426-48550488)
chr4 (116-169)||(33574199-33574252)
chr4 (101-165)||(33843807-33843872)
chr4 (91-170)||(13167545-13167625)
chr4 (116-164)||(26651860-26651908)
chr4 (117-165)||(27045554-27045602)
chr4 (85-164)||(55638735-55638815)
chr4 (91-169)||(24370534-24370612)
chr4 (102-172)||(41369938-41370009)
chr4 (108-167)||(46507969-46508028)
chr4 (94-169)||(48575476-48575551)
chr4 (104-146)||(12224473-12224515)
chr4 (85-170)||(39636805-39636891)
chr4 (101-170)||(54487216-54487286)
chr4 (86-139)||(4645941-4645994)
chr4 (86-170)||(6138601-6138686)
chr4 (104-165)||(17898057-17898117)
chr4 (86-170)||(19592212-19592297)
chr4 (104-164)||(20232008-20232069)
chr4 (86-170)||(29149288-29149373)
chr4 (61-114)||(36150666-36150719)
chr4 (103-163)||(39672982-39673043)
chr4 (91-172)||(40286300-40286381)
chr4 (117-170)||(41751213-41751266)
chr4 (117-170)||(46830082-46830135)
chr4 (85-165)||(48550242-48550323)
chr4 (117-170)||(54153065-54153117)
chr4 (102-165)||(4954048-4954112)
chr4 (116-172)||(33456461-33456517)
chr4 (91-170)||(43772109-43772189)
chr4 (83-142)||(48407676-48407736)
[»] chr5 (29 HSPs)
chr5 (102-199)||(621289-621387)
chr5 (99-188)||(22811056-22811147)
chr5 (104-165)||(2868350-2868411)
chr5 (103-164)||(6988217-6988278)
chr5 (86-170)||(22482238-22482323)
chr5 (86-134)||(38265061-38265109)
chr5 (100-170)||(10273264-10273334)
chr5 (104-169)||(24036623-24036689)
chr5 (63-170)||(13253038-13253145)
chr5 (117-165)||(19784867-19784915)
chr5 (115-165)||(5969955-5970005)
chr5 (65-144)||(2694717-2694797)
chr5 (91-170)||(33467975-33468055)
chr5 (91-170)||(40495341-40495421)
chr5 (91-165)||(2483697-2483772)
chr5 (61-172)||(19203958-19204069)
chr5 (117-172)||(30364843-30364897)
chr5 (116-170)||(4292198-4292252)
chr5 (104-170)||(14299417-14299483)
chr5 (132-170)||(28973948-28973986)
chr5 (92-170)||(29922991-29923069)
chr5 (86-170)||(3667903-3667988)
chr5 (86-170)||(10058123-10058208)
chr5 (109-170)||(11599718-11599779)
chr5 (86-142)||(32030791-32030848)
chr5 (113-170)||(32051384-32051441)
chr5 (86-170)||(35760238-35760323)
chr5 (104-164)||(5465398-5465458)
chr5 (91-170)||(9275467-9275547)
[»] chr3 (48 HSPs)
chr3 (91-199)||(21023203-21023311)
chr3 (99-170)||(7012675-7012747)
chr3 (99-165)||(10852707-10852774)
chr3 (91-170)||(44225600-44225679)
chr3 (83-170)||(10334173-10334261)
chr3 (91-163)||(21261225-21261297)
chr3 (102-189)||(46864309-46864397)
chr3 (99-165)||(23918882-23918949)
chr3 (91-170)||(31766162-31766241)
chr3 (86-165)||(10853248-10853328)
chr3 (61-171)||(23496351-23496462)
chr3 (104-170)||(25181245-25181311)
chr3 (85-170)||(50664793-50664879)
chr3 (102-170)||(41459250-41459319)
chr3 (91-150)||(14651088-14651148)
chr3 (86-165)||(42644302-42644382)
chr3 (91-165)||(30958132-30958207)
chr3 (91-165)||(30973944-30974019)
chr3 (118-164)||(22737055-22737101)
chr3 (104-165)||(32523262-32523323)
chr3 (116-164)||(19877458-19877506)
chr3 (93-160)||(29716674-29716742)
chr3 (91-163)||(39657985-39658057)
chr3 (65-165)||(41115251-41115351)
chr3 (103-170)||(49526667-49526735)
chr3 (94-134)||(54784462-54784502)
chr3 (91-134)||(8802109-8802152)
chr3 (104-170)||(31084242-31084309)
chr3 (91-170)||(53567967-53568046)
chr3 (106-164)||(24916581-24916639)
chr3 (91-165)||(25129454-25129528)
chr3 (91-169)||(27825294-27825372)
chr3 (61-146)||(30811488-30811574)
chr3 (104-170)||(32932113-32932179)
chr3 (91-165)||(53078398-53078472)
chr3 (91-164)||(1114935-1115008)
chr3 (117-170)||(3348278-3348331)
chr3 (91-172)||(4486845-4486926)
chr3 (86-170)||(26519699-26519784)
chr3 (116-165)||(30301201-30301250)
chr3 (117-170)||(33548341-33548394)
chr3 (116-165)||(38340845-38340894)
chr3 (117-162)||(46853475-46853520)
chr3 (91-170)||(23207054-23207134)
chr3 (118-170)||(34561143-34561195)
chr3 (83-146)||(35425392-35425456)
chr3 (91-170)||(48189428-48189507)
chr3 (118-170)||(53179883-53179935)
[»] chr6 (19 HSPs)
chr6 (91-165)||(3605738-3605812)
chr6 (91-170)||(16121987-16122067)
chr6 (91-170)||(1499991-1500070)
chr6 (86-164)||(17829979-17830058)
chr6 (116-170)||(16548174-16548228)
chr6 (95-164)||(2928085-2928154)
chr6 (86-139)||(16540229-16540282)
chr6 (91-170)||(4910999-4911078)
chr6 (94-165)||(10826131-10826203)
chr6 (92-171)||(19260799-19260878)
chr6 (114-161)||(34025777-34025824)
chr6 (104-146)||(9043732-9043774)
chr6 (104-162)||(26692426-26692484)
chr6 (111-160)||(1758256-1758305)
chr6 (61-165)||(5584005-5584109)
chr6 (91-143)||(21455942-21455995)
chr6 (86-146)||(29399774-29399835)
chr6 (86-170)||(33898986-33899071)
chr6 (62-166)||(10054950-10055054)
[»] chr7 (36 HSPs)
chr7 (61-165)||(39634108-39634213)
chr7 (85-170)||(44967366-44967452)
chr7 (94-170)||(36920154-36920231)
chr7 (91-170)||(42752164-42752244)
chr7 (91-170)||(15311190-15311269)
chr7 (91-165)||(20088930-20089005)
chr7 (102-165)||(44274699-44274762)
chr7 (105-165)||(16079463-16079524)
chr7 (86-170)||(48459766-48459851)
chr7 (86-165)||(10371926-10372006)
chr7 (91-198)||(33936794-33936902)
chr7 (102-165)||(38494277-38494341)
chr7 (116-164)||(42740454-42740502)
chr7 (91-170)||(47021975-47022055)
chr7 (118-169)||(38510364-38510415)
chr7 (85-170)||(3622427-3622513)
chr7 (104-170)||(4228603-4228669)
chr7 (85-170)||(34010396-34010481)
chr7 (116-170)||(38230124-38230178)
chr7 (117-170)||(36271060-36271113)
chr7 (91-159)||(7169007-7169075)
chr7 (86-165)||(37639491-37639571)
chr7 (118-165)||(12306819-12306866)
chr7 (91-169)||(16353484-16353563)
chr7 (118-165)||(33746450-33746497)
chr7 (91-170)||(40491669-40491748)
chr7 (116-170)||(3342846-3342900)
chr7 (116-170)||(3750742-3750796)
chr7 (101-170)||(29829293-29829363)
chr7 (121-170)||(26975301-26975350)
chr7 (85-165)||(41715718-41715799)
chr7 (93-137)||(31625560-31625604)
chr7 (91-142)||(39391110-39391162)
chr7 (62-145)||(40903112-40903196)
chr7 (101-165)||(44856716-44856780)
chr7 (91-166)||(46541660-46541736)
[»] scaffold0005 (1 HSPs)
scaffold0005 (61-170)||(253163-253273)
[»] scaffold0009 (1 HSPs)
scaffold0009 (116-165)||(199381-199430)
[»] scaffold0015 (1 HSPs)
scaffold0015 (94-165)||(65540-65611)
[»] scaffold0168 (2 HSPs)
scaffold0168 (91-139)||(31951-31999)
scaffold0168 (91-134)||(32035-32078)
[»] scaffold0394 (1 HSPs)
scaffold0394 (86-146)||(5811-5872)
[»] scaffold0369 (1 HSPs)
scaffold0369 (91-170)||(8484-8564)
[»] scaffold0184 (1 HSPs)
scaffold0184 (91-135)||(7350-7394)
[»] scaffold0041 (1 HSPs)
scaffold0041 (62-145)||(46822-46906)
[»] scaffold0003 (1 HSPs)
scaffold0003 (117-165)||(301565-301613)


Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 39210842 - 39211077
Alignment:
Q  1 cattgcacctttaccgataattacccacaaagaaactctaactagctcatagggagaggcagtgtgtgtttggttgtgcaacgacgagatttgattttga 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39210842 cattgcacccttaccgataattacccacaaagaaactctaactagctcatagggagaggcagtgtgtgtttggttgtgcaacgacgagatatgattttga 39210941  T
Q  101 aaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatacttcaaaacagaattgattttcatgaaaac- 199  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  39210942 aaaaattgattttgtagaattgattttggttaaa---aagttgaatataaagtgatttatgtttgaatacttcaaaacagaattgattttaatgaaaact 39211038  T
Q  200 -atgtttgaataatcagaaatgatatttgaacaaccatt 237  Q
      |||||||||||||||||||||||||||||||||||||    
T  39211039 ggtgtttgaataatcagaaatgatatttgaacaaccatt 39211077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 65 - 165
Target Start/End: Complemental strand, 36779539 - 36779439
Alignment:
Q  65 tgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    |||||||||||||||   ||||||| |||||||||| | ||||||||||||||||||||||||| |||||||| |||||||| |||||| ||||||||||    
T  36779539 tgtgtttggttgtgcggtgacgagaattgattttgatataattgattttgtagaattgattttgattaaaagtgagttgaatgtaaagtaatttatgttt 36779440  T
Q  165 g 165  Q
    |    
T  36779439 g 36779439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 19649281 - 19649200
Alignment:
Q  118 aattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata-cttcaaaacagaattgattttcatgaaaa 198  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||| || ||||||  |||||||    
T  19649281 aattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttcaaaacaaaagtgatttgtatgaaaa 19649200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 29970924 - 29970845
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| | |||||| |||||| |||||||||| ||||||||| |||||| | |||||||||||||||||| ||||    
T  29970924 ttgattttgatagaattgaatttgtataattgattttagttaaaagtgagttgagtttaaagtgatttatgtttggatac 29970845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 35239608 - 35239539
Alignment:
Q  104 aattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatactt 172  Q
    ||||||||||| || |||||||||||||||||||| | ||||||||||| | ||||||||||||||||||    
T  35239608 aattgattttgataaaattgattttggttaaaagtgaattgaatataaaataatttatgtttgaatactt 35239539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 38516407 - 38516346
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||||||||||||||||||| | ||| ||| |||||||| ||||||||||||||||||    
T  38516407 aattgattttgtagaattgattttcgataatagtgagttgaatgtaaagtgatttatgtttg 38516346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 31246301 - 31246381
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| | |||||||||||| |||||||||||| ||||||||| |||||||| | || ||||||||||||| ||||    
T  31246301 ttgattttgacagaattgattttgttagaattgatttttgttaaaagtgagttgaatgtgaattgatttatgtttggatac 31246381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 20190250 - 20190187
Alignment:
Q  102 aaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||||| | |||||||||||||||||||| |||| || ||||| |||||||||||||    
T  20190250 aaaattgattttgcataattgattttggttaaaagtgagtttaagataaaatgatttatgtttg 20190187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 39219836 - 39219769
Alignment:
Q  99 gaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||| |||||| ||||||||||||| ||||||||| |||| ||||| ||||||||||||||||    
T  39219836 gaaaaaattaattttgatagaattgattttcgttaaaagtgagtttaatatgaagtgatttatgtttg 39219769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 1373148 - 1373082
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||||| |||||||||||| ||||||| |||||||  | |||||||||||||||| ||||    
T  1373148 aattgattttgtaaaattgattttggataaaagtgagttgaagttgaagtgatttatgtttggatac 1373082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 40792160 - 40792246
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaat 146  Q
    |||||| |||||||| | ||||||||| | |||||||| | ||||||||||||| || ||||||||||| |||||||| ||||||||    
T  40792160 agtgtgggtttggttctacaacgacgaaaattgattttaataaaattgattttgatataattgattttgattaaaagtgagttgaat 40792246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 26491045 - 26490976
Alignment:
Q  102 aaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||||| ||||||||||||||||||||||| |||||| | |||| |||||| |||||| ||||    
T  26491045 aaaattgattttggtagaattgattttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 26490976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 10552901 - 10552969
Alignment:
Q  96 tttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    |||||| ||||||||  | || |||||||||||||||||||| |||||||| |||| ||||||||||||    
T  10552901 tttgaataaattgatactctaaaattgattttggttaaaagtgagttgaatgtaaattgatttatgttt 10552969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 2764413 - 2764463
Alignment:
Q  120 ttgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||| || |||||||||||||||||||||||||||||||| |||| ||||    
T  2764413 ttgatattagttaaaagtaagttgaatataaagtgatttatatttggatac 2764463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 22936805 - 22936859
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||||||||||||| |||||||| | || ||||||||||||| ||||    
T  22936805 agaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 22936859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 33588829 - 33588763
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||| ||||||||||||||| |||||||| |||| ||| |||| | ||||||||||| ||||    
T  33588829 aattgatttagtagaattgattttgattaaaagtgagtttaatgtaaaattatttatgtttggatac 33588763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 3467662 - 3467581
Alignment:
Q  85 cgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||| |||||||||| | |||||| ||||  |||||||||||||||||||||| |||||||| | || |||||| ||||||    
T  3467662 cgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttctgtttg 3467581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 38715209 - 38715270
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||| |||||||||||| ||||||| | |||| | | ||||||||||||||||||    
T  38715209 aattgattttgcagaattgattttagttaaaattgagttaagtgtaaagtgatttatgtttg 38715270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 14930274 - 14930230
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatg 161  Q
    |||||||||| ||||||||||||||||||| ||||||||| ||||    
T  14930274 gaattgatttaggttaaaagtaagttgaatgtaaagtgatctatg 14930230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 24897574 - 24897653
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| |||||||| ||| | |||||||||||||||||||||| ||||| |||| || ||| ||||||||| ||||    
T  24897574 ttgattttgataaaattgagtttatgagaattgattttggttaaaagtgagttggatatgaa-tgaattatgtttggatac 24897653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 28425458 - 28425510
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagtt 142  Q
    |||||||||| | |||||||||||| |||||||||||||||||||||| ||||    
T  28425458 ttgattttgatagaattgattttgttagaattgattttggttaaaagtgagtt 28425510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 43550986 - 43550934
Alignment:
Q  118 aattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||||||||||| |||||||| | || ||||||||||||| ||||    
T  43550986 aattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 43550934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 27649896 - 27649821
Alignment:
Q  63 tgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgta-gaattgattttggttaaaagt 137  Q
    |||||||||||||| ||   ||||||| |||||||||| | |||||| |||| | |||||||||||||||||||||    
T  27649896 tgtgtgtttggttgggcggtgacgagaattgattttgatagaattgagtttgaaagaattgattttggttaaaagt 27649821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 40991571 - 40991638
Alignment:
Q  101 aaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaat 168  Q
    |||||||||||||||| || |||||||  |||||| | |||||||| ||||||  |||||||||||||    
T  40991571 aaaaattgattttgtaaaaatgattttacttaaaaatgagttgaatgtaaagttgtttatgtttgaat 40991638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 1836127 - 1836201
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||  |||||||||||||||||||||||||  |  |||||  ||||||| | |||| |||||||||||    
T  1836127 ttgattttgattaaattgattttgtagaattgattttaatctaaagtgggttgaatgtgaagttatttatgtttg 1836201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 40742221 - 40742167
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||||||||||||| ||||| || | || ||||||||||||| ||||    
T  40742221 agaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 40742167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 3097218 - 3097267
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||||||||||||||||| ||||  |||| || |||||||||||||    
T  3097218 agaattgattttggttaaaagtgagtttgatatgaattgatttatgtttg 3097267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 10368135 - 10368062
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    ||||||||||   ||||| ||||||| |||||||||||  ||||||| |||||||  ||||||||||| |||||    
T  10368135 ttgattttgagtgaattgtttttgtaaaattgattttgagtaaaagtgagttgaaggtaaagtgatttgtgttt 10368062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 25497814 - 25497761
Alignment:
Q  91 ttgattttgaaaaaattgatttt-gtagaattgattttggttaaaagtaagttg 143  Q
    |||||||||| |||||||| ||| | |||||||||||||||||||||| |||||    
T  25497814 ttgattttgataaaattgagtttaggagaattgattttggttaaaagtgagttg 25497761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 35495147 - 35495086
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||| |||| ||||| || || ||||||||  ||||||||||||||||||| ||||||    
T  35495147 aattgattatgtaaaattgcttctgattaaaagtgggttgaatataaagtgatttgtgtttg 35495086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 41891819 - 41891880
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||||||||||||||||||| |||| |||| ||||||  | ||| |||||| ||||||    
T  41891819 aattgattttgtagaattgattttagttagaagtgagttgagcaaaaattgatttgtgtttg 41891880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 15206791 - 15206739
Alignment:
Q  118 aattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||| ||||||| |||||||| | || ||||||||||||| ||||    
T  15206791 aattgattttgggtaaaagtgagttgaatgtgaattgatttatgtttggatac 15206739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 30081637 - 30081689
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagtt 142  Q
    |||||||||| |||||||||||||| | |||||||||| ||||||||| ||||    
T  30081637 ttgattttgataaaattgattttgtgaaaattgattttagttaaaagtgagtt 30081689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 35239527 - 35239487
Alignment:
Q  158 tatgtttgaatacttcaaaacagaattgattttcatgaaaa 198  Q
    |||||||||||||||||||||| || ||||||| |||||||    
T  35239527 tatgtttgaatacttcaaaacaaaagtgatttttatgaaaa 35239487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 38386476 - 38386432
Alignment:
Q  102 aaaattgattttg-tagaattgattttggttaaaagtaagttgaa 145  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||    
T  38386476 aaaattgattttgatagaattgattctggctaaaagtaagttgaa 38386432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 199
Target Start/End: Original strand, 15214 - 15352
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttat 160  Q
    |||||||||||||||||||   ||||| | |||||||||| | ||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  15214 agtgtgtgtttggttgtgcggtgacgaaaattgattttgatagaattgattttgtcaaattgattttggttaaaagtgagttgaatataaagtgatttat 15313  T
Q  161 gtttgaatacttcaaaacagaattgattttcatgaaaac 199  Q
    ||||| ||||||||||||| || ||||||| ||||||||    
T  15314 gtttggatacttcaaaacataagtgatttttatgaaaac 15352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 199
Target Start/End: Complemental strand, 12111027 - 12110889
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttat 160  Q
    |||||||||||||||||||   ||||| | |||||||||| | ||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  12111027 agtgtgtgtttggttgtgcggtgacgaaaattgattttgatagaattgattttgtcaaattgattttggttaaaagtgagttgaatataaagtgatttat 12110928  T
Q  161 gtttgaatacttcaaaacagaattgattttcatgaaaac 199  Q
    ||||| ||||||||||||| || ||||||| ||||||||    
T  12110927 gtttggatacttcaaaacataagtgatttttatgaaaac 12110889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 1763375 - 1763234
Alignment:
Q  59 gcagtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgattt 158  Q
    |||| ||||||||||||||||   ||||||| |||||||||| ||||||||||||||| |||||||||||||||||| | |||||||| |||||||||||    
T  1763375 gcagcgtgtgtttggttgtgcggtgacgagaattgattttgataaaattgattttgtaaaattgattttggttaaaattgagttgaatttaaagtgattt 1763276  T
Q  159 atgtttgaata-cttcaaaacagaattgattttcatgaaaac 199  Q
    ||||||  ||| ||||||||||||| ||||||| ||||||||    
T  1763275 atgtttagataccttcaaaacagaagtgatttttatgaaaac 1763234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 23359922 - 23360013
Alignment:
Q  99 gaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata-cttcaaaacagaattgatt 188  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||| || |||||    
T  23359922 gaaaaaattgattttggtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttcaaaacaaaagtgatt 23360013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 170
Target Start/End: Complemental strand, 3854054 - 3853944
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgattta 159  Q
    |||||||||||||||||||     ||||| |||| |||||   ||||||||||| |||||||||||||| |||||||| |||||||| |||| |||||||    
T  3854054 agtgtgtgtttggttgtgcggtagcgagaattgagtttgatggaattgattttgatagaattgattttgattaaaagtgagttgaatgtaaattgattta 3853955  T
Q  160 tgtttgaatac 170  Q
    |||||| ||||    
T  3853954 tgtttggatac 3853944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 5055294 - 5055213
Alignment:
Q  89 atttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||||   |||| |||||| |||||||||||||||||||||| |||| || |||||||| ||| |||||||||||    
T  5055294 atttgattttgattgaattaattttgcagaattgattttggttaaaagtgagtttaacataaagtggtttgtgtttgaatac 5055213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 29844292 - 29844192
Alignment:
Q  99 gaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata-cttcaaaacagaattgattttcatgaa 196  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||  ||||||||||||||||||  || |||||||||| || ||||||  |||||    
T  29844292 gaaaaaattgattttggtagaattgattttggttaaaa-aaagttgaaggtaaagtgatttatgtttggttaccttcaaaacaaaagtgatttgtatgaa 29844194  T
Q  197 aa 198  Q
    ||    
T  29844193 aa 29844192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 18511231 - 18511141
Alignment:
Q  86 gagatttgattttgaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatacttcaa 175  Q
    |||| |||||||||| ||||||||||||| || |||||||||||||||||||| | || ||| | || ||||||||||||| |||| ||||    
T  18511231 gagaattgattttgataaaattgattttgatataattgattttggttaaaagtgatttaaatgttaattgatttatgtttggatacatcaa 18511141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 45000421 - 45000503
Alignment:
Q  89 atttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatat-aaagtgatttatgtttgaatac 170  Q
    ||||||||||||| ||||||||| |||| ||||||||||   ||||||| ||||||| || |||||||||||| |||||||||    
T  45000421 atttgattttgaataaattgattatgtaaaattgattttacctaaaagtgagttgaagatgaaagtgatttatatttgaatac 45000503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 1945018 - 1945103
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||| ||||  |||||||||||||||||||||| |||||||| | || ||||||||||||| ||||    
T  1945018 gagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 1945103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 6767844 - 6767772
Alignment:
Q  92 tgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    |||||||||| ||| |||||||||| |||||||| || |||||| | |||||||| |||||||||||| ||||    
T  6767844 tgattttgaataaactgattttgtaaaattgattgtgattaaaaatgagttgaatgtaaagtgatttacgttt 6767772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 10918700 - 10918652
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  10918700 gaattgattttggataaaagtgagttgaatgtaaagtgatttatgtttg 10918652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 32596175 - 32596099
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagt 137  Q
    ||||| |||||||||||| || |  |||| |||||||||| | |||||||| |||||||| ||||||||||||||||    
T  32596175 agtgtatgtttggttgtgtaatggagagagttgattttgatataattgattatgtagaatcgattttggttaaaagt 32596099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 38600453 - 38600507
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||||||||||||| ||||  || |||| ||||||||||||||||||    
T  38600453 agaattgattttggttaaaagtgagtttgatgtaaattgatttatgtttgaatac 38600507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 4007132 - 4007193
Alignment:
Q  105 attgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttga 166  Q
    |||||||||||| |||||||| ||| ||||||| ||||||||  ||||| ||||||||||||    
T  4007132 attgattttgtaaaattgattatggataaaagtgagttgaatgaaaagtaatttatgtttga 4007193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 34433285 - 34433370
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||| ||||  ||||||||||||| |||||||| |||||||| | || ||||||||||||| ||||    
T  34433285 gagaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgagttgaatgtgaattgatttatgtttggatac 34433370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 170
Target Start/End: Original strand, 39141425 - 39141533
Alignment:
Q  62 gtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgta-gaattgattttggttaaaagtaagttgaatataaagtgatttat 160  Q
    ||||||||||||||| ||   | ||||| |||||||||| | |||||| |||| | ||||||||||||||||||||| ||||| |||| || ||| ||||    
T  39141425 gtgtgtgtttggttgggcggtggcgagaattgattttgatataattgagtttgaaagaattgattttggttaaaagtgagttggatatgaattga-ttat 39141523  T
Q  161 gtttgaatac 170  Q
    ||||| ||||    
T  39141524 gtttggatac 39141533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 30007532 - 30007612
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||| |||||||||| | |||||| ||||  |||||| ||||||||||||||| |||||||| | || |||||||||||||    
T  30007532 gagaattgattttgatagaattgagtttgagagaattaattttggttaaaagtgagttgaatgtgaattgatttatgtttg 30007612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 16467210 - 16467135
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||||| | |||||||||||  | |||||||||||||||||||| ||||  || |||| |||||||||||||    
T  16467210 ttgattttgatagaattgattttggcataattgattttggttaaaagtgagttagatgtaaattgatttatgtttg 16467135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 23377600 - 23377529
Alignment:
Q  118 aattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata-cttcaaaacagaattgatt 188  Q
    |||| ||||||||||||||| |||||||| |||  ||||||||||||| ||| |||||||||| || |||||    
T  23377600 aattaattttggttaaaagtgagttgaatgtaagttgatttatgtttggataccttcaaaacaaaagtgatt 23377529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 40704750 - 40704671
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||  |||||||| |||  |||||||||||||||||| | | |||||| |||| |||||||  |||||||||    
T  40704750 ttgattttgaatgaattgattatgtgaaattgattttggttaaaatttatttgaatgtaaattgatttaattttgaatac 40704671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 11759787 - 11759853
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||||| ||||||||||| |||||||| |||||||  |||| || ||| |||||| ||||    
T  11759787 aattgattttgtaaaattgattttgattaaaagtgagttgaaggtaaattggtttgtgtttgtatac 11759853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 26806265 - 26806319
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||||| |||||||| |||||| |  ||||||||||||||||| ||||    
T  26806265 agaattgattttgattaaaagtgagttgagtgaaaagtgatttatgtttggatac 26806319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 2213635 - 2213550
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||| ||||  ||||||||||||| | |||||| |||||||| | || ||||||||||||| ||||    
T  2213635 gagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttggatac 2213550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 5916221 - 5916282
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaat 146  Q
    |||| |||||||||| | |||| ||||||  |||||||||||||||||||||| ||||||||    
T  5916221 gagaattgattttgatagaattaattttgagagaattgattttggttaaaagtgagttgaat 5916282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 145
Target Start/End: Complemental strand, 6737724 - 6737683
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaa 145  Q
    |||||||||||||| ||||||||||||||||| | |||||||    
T  6737724 aattgattttgtagcattgattttggttaaaaatgagttgaa 6737683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 9988480 - 9988565
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||| ||||  |||||||||||| ||||||||| ||||| || | || ||||||||||||| ||||    
T  9988480 gagaattgattttgatagaattgagtttgagagaattgatttttgttaaaagtgagttggatgtgaattgatttatgtttggatac 9988565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 15220786 - 15220855
Alignment:
Q  101 aaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||||  ||||||| ||   |||||| |||||||| |||||||||||||||||| ||||    
T  15220786 aaaatttgattttgtaatattgattatgacgaaaagtgagttgaatgtaaagtgatttatgtttggatac 15220855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 30599899 - 30599968
Alignment:
Q  102 aaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||| |||||| ||||||||||||||||||||||| |||||| | | || |||||| |||||| ||||    
T  30599899 aaaattaattttgatagaattgattttggttaaaagtgagttgagtgtcaattgatttgtgtttggatac 30599968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 31562665 - 31562718
Alignment:
Q  85 cgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagt 137  Q
    ||||| |||||||||| |||||||| ||||  ||||||||||||||||||||||    
T  31562665 cgagaattgattttgataaaattgagtttgagagaattgattttggttaaaagt 31562718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 36312405 - 36312344
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaat 146  Q
    |||| |||||||||| | |||| ||||||  |||||||||||||||||||||| ||||||||    
T  36312405 gagaattgattttgatagaattaattttgagagaattgattttggttaaaagtgagttgaat 36312344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 42089538 - 42089587
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||||| |||||||| |||||||| | || |||||||||||||    
T  42089538 agaattgattttgattaaaagtgagttgaatgtgaattgatttatgtttg 42089587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 9143145 - 9143097
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaa 139  Q
    |||||||| | |||||||||| ||||||||||||||| |||||| ||||    
T  9143145 ttgattttaataaaattgattatgtagaattgattttagttaaatgtaa 9143097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 12850768 - 12850720
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgtagaattgattttggttaaa 134  Q
    |||| |||||||| | | |||||||| ||||||||||||||||||||||    
T  12850768 gagaattgattttaatagaattgattatgtagaattgattttggttaaa 12850720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 15928373 - 15928421
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaa 139  Q
    |||||||||  | |||| ||| |||||||||||||||||||||||||||    
T  15928373 ttgattttggtataattaattctgtagaattgattttggttaaaagtaa 15928421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 47981756 - 47981883
Alignment:
Q  64 gtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtt 163  Q
    |||||||||||||||    ||||||| |||||||| | ||||||||||||||| |||| ||||||||||||| | |||||||| ||||||||||||||||    
T  47981756 gtgtgtttggttgtgtggtgacgagaattgattttaataaaattgattttgtaaaattaattttggttaaaattgagttgaatttaaagtgatttatgtt 47981855  T
Q  164 tgaata-cttcaaaacagaattgatttt 190  Q
    || ||| ||||||||||||| |||||||    
T  47981856 tggataccttcaaaacagaagtgatttt 47981883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 4347112 - 4347004
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata-cttcaaaacagaattgattt 189  Q
    |||||||||  | |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||| || ||||||    
T  4347112 ttgattttggtagaattgattttgtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttcaaaacaaaagtgattt 4347013  T
Q  190 tcatgaaaa 198  Q
      |||||||    
T  4347012 gtatgaaaa 4347004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 165
Target Start/End: Complemental strand, 40352559 - 40352455
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttat 160  Q
    |||||||||||||||||||   || |||| |||||||||| | |||||||||||| ||||||||||||||||||||| |||| ||| |||||||||||||    
T  40352559 agtgtgtgtttggttgtgcggtgaggagaattgattttgatagaattgattttgtggaattgattttggttaaaagtgagtttaatgtaaagtgatttat 40352460  T
Q  161 gtttg 165  Q
    |||||    
T  40352459 gtttg 40352455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 13344911 - 13344837
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||   |||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  13344911 ttgattttgattgaattgattttgtagaattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttg 13344837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 170
Target Start/End: Complemental strand, 25061395 - 25061285
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgattta 159  Q
    ||||||||||||||| |||   ||| | | |||||||||  ||||||||||||| | ||||||||||||||||||||| ||||||| ||||| |||||||    
T  25061395 agtgtgtgtttggttctgcggtgacaaaaattgattttgttaaaattgattttggttgaattgattttggttaaaagtgagttgaacataaattgattta 25061296  T
Q  160 tgtttgaatac 170  Q
    |||||| ||||    
T  25061295 tgtttggatac 25061285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 5930891 - 5930790
Alignment:
Q  99 gaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata-cttcaaaacagaattgattttcatgaa 196  Q
    ||||||||| |||| | ||||||||||||||||||||||||| |||||| ||||||||||||||||||  || |||||||||| || ||||||  |||||    
T  5930891 gaaaaaattaatttagatagaattgattttggttaaaagtaaattgaatgtaaagtgatttatgtttggttaccttcaaaacaaaagtgatttgtatgaa 5930792  T
Q  197 aa 198  Q
    ||    
T  5930791 aa 5930790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 29438726 - 29438648
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    |||| |||||| ||| ||||||||||||| ||||||||||||| | |||||| |||| ||||||||||| |||||||||    
T  29438726 gagaattgattctgataaaattgattttgcagaattgattttgatgaaaagtgagttcaatataaagtggtttatgttt 29438648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 20800259 - 20800344
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||||||||  |||||||||||||||||||||| |||||||| | || ||||||||||||| ||||    
T  20800259 gagaattgattttgatagaattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 20800344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 35569184 - 35569269
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||||||||  |||||||||||||||||||||| |||||||| | || ||||||||||||| ||||    
T  35569184 gagaattgattttgatagaattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 35569269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 5410806 - 5410698
Alignment:
Q  63 tgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgta-gaattgattttggttaaaagtaagttgaatataaagtgatttatg 161  Q
    |||||||||||||  ||  || ||||| |||||||||| | |||||| |||| | |||||||||||| |||||||| ||||| || |||| |||||||||    
T  5410806 tgtgtgtttggtttggcggcggcgagaattgattttgatataattgaatttgaaagaattgattttgattaaaagtgagttggatgtaaattgatttatg 5410707  T
Q  162 tttgaatac 170  Q
    |||||||||    
T  5410706 tttgaatac 5410698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 40643067 - 40642993
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||   |||||||| |||| |||||||||||| ||| || ||||||||| ||||||||||||||||||    
T  40643067 ttgattttgagtgaattgattctgtaaaattgattttggataagagcaagttgaatgtaaagtgatttatgtttg 40642993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 30557699 - 30557626
Alignment:
Q  64 gtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagt 137  Q
    |||||||| |||||||   || |||| |||||||||| | |||||||| |||||||||||||||||||||||||    
T  30557699 gtgtgtttagttgtgcggtgaggagaattgattttgatagaattgattctgtagaattgattttggttaaaagt 30557626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 7335866 - 7335944
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgat--tttggttaaaagtaagttgaatataaagtgatttatgtttgaat 168  Q
    |||||||| | |||| |||||||||| |||||||  ||| ||||||||| |||||||| |||||||||||||||||||||    
T  7335866 ttgattttaataaaaatgattttgta-aattgatattttagttaaaagtgagttgaatgtaaagtgatttatgtttgaat 7335944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 7765241 - 7765352
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttat 160  Q
    ||||||||||||||| |||   ||||||| |||||||||| | ||||||||||  | |||||||| ||  ||||||| ||||| ||  |||||||||| |    
T  7765241 agtgtgtgtttggttatgcggtgacgagaattgattttgatagaattgattttacataattgattatgaataaaagtgagttggatgaaaagtgattttt 7765340  T
Q  161 gtttgaatactt 172  Q
    ||||| ||||||    
T  7765341 gtttggatactt 7765352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 42064 - 41986
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaat 168  Q
    |||||||||| |||||||||||||| |||||||||||| || ||| || |||||||  | || ||||||||||||||||    
T  42064 ttgattttgataaaattgattttgttagaattgattttagtaaaaggtgagttgaacgtgaattgatttatgtttgaat 41986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 1199972 - 1199886
Alignment:
Q  85 cgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||| |||||||||| | |||||| ||||  |||||| ||||||||||||||| |||||||| | || ||||||||||||| ||||    
T  1199972 cgagaattgattttgatagaattgagtttgagagaattaattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 1199886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 13056110 - 13056056
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||||||||||||| |||||| | | || ||||||||||||||||||    
T  13056110 agaattgattttggttaaaagtgagttgagtgtgaattgatttatgtttgaatac 13056056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 45557471 - 45557398
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||| ||||||||| |||| |||||||| ||| | ||||| ||| ||| |||||||||||||||||||    
T  45557471 ttgattttgaataaattgattgtgtaaaattgattatggct-aaagtgagtcgaacataaagtgatttatgtttg 45557398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 29759762 - 29759710
Alignment:
Q  118 aattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||| ||||||||||| |||||||| |||| ||||||||||||| ||||    
T  29759762 aattgattatggttaaaagtgagttgaatgtaaaatgatttatgtttggatac 29759710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 31957923 - 31957987
Alignment:
Q  101 aaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    |||||||||||||| |||||||||||||| |||||||||| |  | | |||||||||||||||||    
T  31957923 aaaaattgattttgatagaattgattttgattaaaagtaaataaagtttaaagtgatttatgttt 31957987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 34718562 - 34718510
Alignment:
Q  118 aattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| ||||||||||||||| ||||  ||||||| ||||||||||||||||||    
T  34718562 aattaattttggttaaaagtgagtttgatataaattgatttatgtttgaatac 34718510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 47978375 - 47978419
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatg 161  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||||    
T  47978375 gaattgattttgggtaaaagtgagttgaatgtaaagtgatttatg 47978419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 48511019 - 48510967
Alignment:
Q  118 aattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||||||||||| |||||||| | || ||||||||||||| ||||    
T  48511019 aattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 48510967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 5268390 - 5268311
Alignment:
Q  91 ttgattttgaaaa-aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata 169  Q
    ||||||||||||  || |||| ||||| |||||||| ||  ||||||| |||||||| ||||||||||| ||||||||||    
T  5268390 ttgattttgaaatgaactgatcttgtaaaattgattctgcctaaaagtgagttgaatgtaaagtgatttttgtttgaata 5268311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 36447664 - 36447747
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatacttca 174  Q
    ||||||||||   |||| |||||||||||||||||||| | |||||| |||| |   |||||||||||||||| |||| |||||    
T  36447664 ttgattttgattgaattaattttgtagaattgattttgatcaaaagtgagttaagagtaaagtgatttatgttggaatgcttca 36447747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 4887895 - 4887845
Alignment:
Q  94 attttgaaaaaattgattttgtagaattgattttggttaaaagtaagttga 144  Q
    ||||||| |||||||||| ||| || |||||||||||||||||||| ||||    
T  4887895 attttgataaaattgattatgttgatttgattttggttaaaagtaatttga 4887845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 10470734 - 10470649
Alignment:
Q  85 cgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||| |||||||||| | |||||| ||||  ||||||||||||| |||||||| |||||||| |||| ||| ||||||||| ||||    
T  10470734 cgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttgaatgtaaattga-ttatgtttggatac 10470649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 15884340 - 15884286
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||||||||||||| ||||| || | || ||||||||||||| ||||    
T  15884340 agaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 15884286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 31223487 - 31223433
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||||||||||||| ||||| || | || ||||||||||||| ||||    
T  31223487 agaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 31223433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 49178301 - 49178235
Alignment:
Q  104 aattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata 169  Q
    ||||||||||| | ||||||||||| ||||||| | | | ||||||||| |||||||||||||||||    
T  49178301 aattgattttgattgaattgatttttgttaaaaatgactcgaatataaattgatttatgtttgaata 49178235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 49242995 - 49243049
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||||||||||| | ||||| || | || ||||||||||||||||||    
T  49242995 agaattgattttggttaaaaatgagttggatgtgaattgatttatgtttgaatac 49243049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 11561935 - 11561882
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata 169  Q
    |||||| ||||||||||||||| |||||||| | || |||||||| ||||||||    
T  11561935 agaattaattttggttaaaagtgagttgaatgtgaattgatttatatttgaata 11561882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 18325053 - 18325094
Alignment:
Q  121 tgattttggttaaaagtaagttgaatataaagtgatttatgt 162  Q
    ||||||||| ||||||| | ||||||||||||||||||||||    
T  18325053 tgattttggctaaaagtcacttgaatataaagtgatttatgt 18325094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 27801633 - 27801714
Alignment:
Q  85 cgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||| |||||||||| | ||||||||||   ||||||||||||| |||||||| ||||  || |||| |||||||||||||    
T  27801633 cgagaattgattttgatagaattgattttaagagaattgattttgattaaaagtgagttagatgtaaattgatttatgtttg 27801714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 32365190 - 32365141
Alignment:
Q  118 aattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaa 167  Q
    |||||||||| || |||||| |||||||| |||| |||||||||||||||    
T  32365190 aattgattttagtcaaaagtgagttgaatgtaaattgatttatgtttgaa 32365141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 42850233 - 42850286
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||||||||||||| ||||| || | || ||||||||||||| ||||    
T  42850233 gaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 42850286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 47085959 - 47085898
Alignment:
Q  104 aattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    ||||||||||| |||||||||||||  |||||||| |||||||| | || ||||||||||||    
T  47085959 aattgattttgatagaattgattttaattaaaagtgagttgaatgtgaattgatttatgttt 47085898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 4369801 - 4369864
Alignment:
Q  102 aaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||||||||  |||||||||||||||||||||| ||||| || | || |||||||||||||    
T  4369801 aaaattgattttgagagaattgattttggttaaaagtgagttg-atgtgaattgatttatgtttg 4369864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 31844215 - 31844247
Alignment:
Q  131 taaaagtaagttgaatataaagtgatttatgtt 163  Q
    |||||||||||||||| ||||||||||||||||    
T  31844215 taaaagtaagttgaatgtaaagtgatttatgtt 31844247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 40229457 - 40229509
Alignment:
Q  91 ttgattttgaaaaaattgattttgtag-aattgattttggttaaaagtaagtt 142  Q
    |||||||||| | |||||||||||| | |||||||||||||||||||| ||||    
T  40229457 ttgattttgatagaattgattttgttggaattgattttggttaaaagtgagtt 40229509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 198
Target Start/End: Complemental strand, 22699833 - 22699733
Alignment:
Q  100 aaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata-cttcaaaacagaattgattttcatgaaa 197  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| || ||||||  ||||||    
T  22699833 aaaaaattgattttggtagaattgattttggttaaaagtaagttgaatgtaaagtgatttatgtttggataccttcaaaacaaaagtgatttgtatgaaa 22699734  T
Q  198 a 198  Q
    |    
T  22699733 a 22699733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 198
Target Start/End: Original strand, 22980697 - 22980797
Alignment:
Q  100 aaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata-cttcaaaacagaattgattttcatgaaa 197  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| || ||||||  ||||||    
T  22980697 aaaaaattgattttggtagaattgattttggttaaaagtaagttgaatgtaaagtgatttatgtttggataccttcaaaacaaaagtgatttgtatgaaa 22980796  T
Q  198 a 198  Q
    |    
T  22980797 a 22980797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 198
Target Start/End: Original strand, 22994284 - 22994384
Alignment:
Q  100 aaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata-cttcaaaacagaattgattttcatgaaa 197  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| || ||||||  ||||||    
T  22994284 aaaaaattgattttggtagaattgattttggttaaaagtaagttgaatgtaaagtgatttatgtttggataccttcaaaacaaaagtgatttgtatgaaa 22994383  T
Q  198 a 198  Q
    |    
T  22994384 a 22994384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 46958115 - 46958030
Alignment:
Q  99 gaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata-cttcaaaacagaa 182  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||  |||||| |||||||||||  || |||||||||||||    
T  46958115 gaaaaaattgattttgatagaattgattttggttaaaagtgagttgaacgtaaagtaatttatgtttggttaccttcaaaacagaa 46958030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 54488705 - 54488625
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| | |||||||||||| |||||||||||| ||||||||| |||||||| | || ||||||||||||||||||    
T  54488705 ttgattttgacagaattgattttgttagaattgatttttgttaaaagtgagttgaatgtgaattgatttatgtttgaatac 54488625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 38740289 - 38740368
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||  ||||||||||||| |||||||||||| ||||||| |||||||  | |||||||||||||||| ||||    
T  38740289 ttgattttgaatgaattgattttgtaaaattgattttggataaaagtgagttgaagttgaagtgatttatgtttggatac 38740368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 22694607 - 22694656
Alignment:
Q  114 gtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtt 163  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  22694607 gtagaattgattttggttaaaagtgagttgaacataaagtgatttatgtt 22694656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 40335703 - 40335606
Alignment:
Q  104 aattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata-cttcaaaacagaattgattttcatgaaaac 199  Q
    ||||||||||| || |||| ||||||||||||||| | || ||| |||||||||||||||||| ||| ||||||||||||  ||||||| ||||||||    
T  40335703 aattgattttgataaaattaattttggttaaaagtgaattaaatttaaagtgatttatgtttgtataccttcaaaacagacgtgatttttatgaaaac 40335606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 1616589 - 1616515
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgtagaattgattttggttaaaa 135  Q
    ||||| |||||||||||||   ||  ||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  1616589 agtgtttgtttggttgtgcggtgaatagaattgattttgatagaattgattttgtagaattgattttggttaaaa 1616515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 170
Target Start/End: Original strand, 14564102 - 14564212
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgattta 159  Q
    |||||||||||||||| ||  ||  |||| |||||||||| | |||||| ||||  ||||||||||||||||||| || ||||| |||| || |||||||    
T  14564102 agtgtgtgtttggttgggcggcggagagaattgattttgatagaattgagtttgagagaattgattttggttaaatgtgagttggatatgaattgattta 14564201  T
Q  160 tgtttgaatac 170  Q
    |||||| ||||    
T  14564202 tgtttggatac 14564212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 36150691 - 36150629
Alignment:
Q  104 aattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||| || ||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  36150691 aattgattttgatataattgattttgattaaaagtgagttgaatgtaaagtgatttatgtttg 36150629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 170
Target Start/End: Complemental strand, 51923070 - 51922960
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgattta 159  Q
    ||||||||||||||   ||  |||||||| |||||||||  | |||||| ||||  |||||||||||||||||||||| |||||||| | || |||||||    
T  51923070 agtgtgtgtttggtatggcggcgacgagaattgattttgttagaattgagtttgagagaattgattttggttaaaagtgagttgaatctgaattgattta 51922971  T
Q  160 tgtttgaatac 170  Q
    |||||| ||||    
T  51922970 tgtttggatac 51922960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 170
Target Start/End: Complemental strand, 5025658 - 5025549
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttat 160  Q
    ||||||||||||||| |||   ||| | | ||||||||||   |||||||||||||||||||||||| |||| |||| ||||||  | ||| ||||||||    
T  5025658 agtgtgtgtttggttatgcggtgactaaaattgattttgattgaattgattttgtagaattgattttagttagaagtgagttgagcaaaaattgatttat 5025559  T
Q  161 gtttgaatac 170  Q
    ||||| ||||    
T  5025558 gtttggatac 5025549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 16566410 - 16566325
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||| ||||  |||||||||||||||||||||| |||||||| | || ||||||||||||| ||||    
T  16566410 gagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 16566325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 29778982 - 29779043
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||| |||| |||||||| ||| ||||||| |||||||||||||||||||||| ||||    
T  29778982 aattgattgtgtaaaattgattatggataaaagtgagttgaatataaagtgatttatctttg 29779043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 39187839 - 39187754
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||| ||||  |||||||||||||||||||||||| |||||| | || ||||||||||||| ||||    
T  39187839 gagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtaatttgaatgtgaattgatttatgtttggatac 39187754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 2341517 - 2341453
Alignment:
Q  101 aaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||||||||||||||||||  ||| ||||| |||| ||||||||  ||||||||||||    
T  2341517 aaaaattgattttgtagaattgatttcagtttaaagtgagtttaatataaaaagatttatgtttg 2341453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 5835878 - 5835778
Alignment:
Q  62 gtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatg 161  Q
    |||||||||||||| ||    ||||| | ||||||||||   ||||||||||||||||||||||||| |||||| | | ||||||  |||||||||||||    
T  5835878 gtgtgtgtttggttatgttgtgacgaaaattgattttgattgaattgattttgtagaattgattttgattaaaactgaattgaatgaaaagtgatttatg 5835779  T
Q  162 t 162  Q
    |    
T  5835778 t 5835778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 28947762 - 28947810
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  28947762 gaattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttg 28947810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 38306111 - 38306031
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| | |||||||||||| |||||||||||| ||||||||| ||||||||   || ||||||||||||| ||||    
T  38306111 ttgattttgacagaattgattttgttagaattgatttttgttaaaagtgagttgaatgcgaattgatttatgtttggatac 38306031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 39000534 - 39000613
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||   |||||||||||||||||||| ||| ||||||||| || | |||| ||| ||||||||||||| ||||    
T  39000534 ttgattttgattgaattgattttgtagaattgagtttagttaaaagtgagcttaataaaaaatgatttatgtttggatac 39000613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 42944887 - 42944958
Alignment:
Q  94 attttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    ||||||| | |||||||||||  |||||||||||||||||||||| |||||||| | || ||||||||||||    
T  42944887 attttgatagaattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgttt 42944958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 43868306 - 43868239
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgattt 158  Q
    |||||||||||  ||||||||||||| |||| ||| | |||||||||||||||||  |||||||||||    
T  43868306 ttgattttgaatgaattgattttgtaaaattaattctagttaaaagtaagttgaaagtaaagtgattt 43868239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 48550426 - 48550488
Alignment:
Q  104 aattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||| ||||||||||||||||||||||| ||||| || | || |||||||||||||    
T  48550426 aattgattttgatagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttg 48550488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 33574252 - 33574199
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata 169  Q
    |||||| ||||||||||||||| |||||||| | || |||||||||||||||||    
T  33574252 agaattaattttggttaaaagtgagttgaatgtgaattgatttatgtttgaata 33574199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 33843872 - 33843807
Alignment:
Q  101 aaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||||||||| | ||||||||| ||| ||||||| ||||| || ||||||||||||||||||    
T  33843872 aaaaattgattttgattgaattgattctggctaaaagtgagttggatgtaaagtgatttatgtttg 33843807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 13167625 - 13167545
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| | |||||| ||||  |||||||||||||||||||||| |||||||| | || |||||||| |||| ||||    
T  13167625 ttgattttgatataattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatatttggatac 13167545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 26651860 - 26651908
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    |||||||||||||||||||||| |||||||| | || ||||||||||||    
T  26651860 agaattgattttggttaaaagtgagttgaatgtgaattgatttatgttt 26651908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 27045602 - 27045554
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||| |||||||||||||||||| || ||| |||||||||||    
T  27045602 gaattgattttagttaaaagtaagttgaatgtagagttatttatgtttg 27045554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 55638735 - 55638815
Alignment:
Q  85 cgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    ||||| |||||||||| | |||||| ||||  |||||||||||| ||||||||| |||| ||| |||| ||||||||||||    
T  55638735 cgagaattgattttgatagaattgagtttgagagaattgatttttgttaaaagtgagttaaatgtaaattgatttatgttt 55638815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 24370612 - 24370534
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaat-ataaagtgatttatgtttgaata 169  Q
    |||||||||||  ||||||||||||| |||||||| ||| |||||||||| || || ||||| |||||||||||| ||||    
T  24370612 ttgattttgaattaattgattttgtaaaattgattatggctaaaagtaagctgcatgataaa-tgatttatgtttcaata 24370534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 41369938 - 41370009
Alignment:
Q  102 aaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatg-tttgaatactt 172  Q
    |||||||||||||||||||  ||||||||||||||||| || |||| ||| | |||| || |||||||||||    
T  41369938 aaaattgattttgtagaataaattttggttaaaagtaattttaataaaaaattatttgtgttttgaatactt 41370009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 46507969 - 46508028
Alignment:
Q  108 gattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaa 167  Q
    ||||||||| |||||||| |   ||||||| ||| |||||||||||||||||||||||||    
T  46507969 gattttgtaaaattgattctaaataaaagtgagtggaatataaagtgatttatgtttgaa 46508028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 48575551 - 48575476
Alignment:
Q  94 attttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata 169  Q
    ||||||||  ||||||||||||| |||||||||| | ||||| | |||||||| |||| || ||||| ||||||||    
T  48575551 attttgaatgaattgattttgtaaaattgatttttgataaaaatgagttgaatgtaaaatggtttatttttgaata 48575476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Complemental strand, 12224515 - 12224473
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaat 146  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||    
T  12224515 aattgattttgtaaaatttattttagttaaaagtaagttgaat 12224473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 39636891 - 39636805
Alignment:
Q  85 cgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||| |||||||||| | |||||| ||||  ||||||||||||| |||||||| ||||| || | || ||||||||||||| ||||    
T  39636891 cgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttggatgtgaattgatttatgtttggatac 39636805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 54487216 - 54487286
Alignment:
Q  101 aaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||| |||| |||||||||||| | | |||||| |||||||| |||| ||||||||||||| ||||    
T  54487216 aaaaattgagtttgatagaattgatttcgatcaaaagtgagttgaatgtaaattgatttatgtttggatac 54487286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 4645994 - 4645941
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaa 139  Q
    |||| ||||||||||  ||||||||| |||| |||| |||||||||||||||||    
T  4645994 gagagttgattttgatgaaattgattctgtaaaatttattttggttaaaagtaa 4645941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 6138601 - 6138686
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgtag-aattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||| |||| |  |||||||||||||||||||| ||||| || | || ||||||||||||| ||||    
T  6138601 gagaattgattttgatagaattgagtttgaaataattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 6138686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 17898057 - 17898117
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||||| |||||||| || | ||| || |||||||| ||||||||||||||||||    
T  17898057 aattgattttgtataattgattctgctgaaa-gtgagttgaatgtaaagtgatttatgtttg 17898117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 19592212 - 19592297
Alignment:
Q  86 gagatttgattttgaaaaaattga-ttttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||| ||||  |||||||||||||||||||||| ||||| |  | || ||||||||||||| ||||    
T  19592212 gagaattgattttgatagaattgagttttagagaattgattttggttaaaagtgagttggaagtgaattgatttatgtttggatac 19592297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 20232069 - 20232008
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaag-ttgaatataaagtgatttatgttt 164  Q
    |||||||||| || |||||||||||||||||||| || ||||||  |||||| |||||||||    
T  20232069 aattgattttataaaattgattttggttaaaagttagtttgaatgaaaagtgttttatgttt 20232008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 29149288 - 29149373
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||| ||||  ||||||||||||| | |||||| |||||||| | || ||||||||||||| ||||    
T  29149288 gagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttggatac 29149373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 36150719 - 36150666
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttg 114  Q
    |||||||||||||||||||   ||||||| |||||||||| | |||||||||||    
T  36150719 agtgtgtgtttggttgtgcggtgacgagaattgattttgatataattgattttg 36150666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 39673043 - 39672982
Alignment:
Q  103 aaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtt 163  Q
    |||||||||||| | ||| ||||||| ||||||| | ||||||||||| |||||||||||||    
T  39673043 aaattgattttgattgaactgattttagttaaaacttagttgaatatagagtgatttatgtt 39672982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 172
Target Start/End: Complemental strand, 40286381 - 40286300
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatactt 172  Q
    |||||||||| | || ||||| | |||||||||||||| |||||| | |||||| |  ||| ||||||||||||| ||||||    
T  40286381 ttgattttgatagaactgattctatagaattgattttgattaaaattgagttgagtgaaaaatgatttatgtttggatactt 40286300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 41751213 - 41751266
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||| |||||| |||||||| |||| || ||||||||||| ||||||||||||    
T  41751213 gaatttattttgtttaaaagtgagttcaagataaagtgattaatgtttgaatac 41751266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 46830082 - 46830135
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||||||||||||| ||||| || | || ||||||||||||| ||||    
T  46830082 gaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 46830135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 48550323 - 48550242
Alignment:
Q  85 cgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||| |||||||||| | ||||||||||   ||||||||||||| |||||||| ||||  || |||| |||||||||||||    
T  48550323 cgagaattgattttgatagaattgattttaagagaattgattttgattaaaagtgagttagatgtaaattgatttatgtttg 48550242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 54153117 - 54153065
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||||||||||||| |||||||| | || ||| ||||||||||||||    
T  54153117 gaattgattttggttaaaagtgagttgaatgtgaattga-ttatgtttgaatac 54153065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 4954048 - 4954112
Alignment:
Q  102 aaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||||||||  |||||||||||||||||||||| ||||  || | || |||||||||||||    
T  4954048 aaaattgattttgagagaattgattttggttaaaagtgagtttgatgtgaattgatttatgtttg 4954112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 33456517 - 33456461
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatactt 172  Q
    |||||||||||||||||||||||| ||  |   ||||| ||||||||||||||||||    
T  33456517 agaattgattttggttaaaagtaattttgaccaaaagttatttatgtttgaatactt 33456461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 43772109 - 43772189
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| | |||||| ||||  |||||||||||||||||||||| ||||| || | ||  |||||||||||| ||||    
T  43772109 ttgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaatcgatttatgtttggatac 43772189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 48407676 - 48407736
Alignment:
Q  83 gacgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagtt 142  Q
    ||||||| |||||||||| | |||||| ||||  |||||||||||||||||||||| ||||    
T  48407676 gacgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 48407736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 621289 - 621387
Alignment:
Q  102 aaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata-cttcaaaacagaattgattttcatgaaaac 199  Q
    ||||||||||||||| |||||||||||||||||| | |||||||| |||||||||||||| ||| ||| ||||||||||||| ||||||| ||||||||    
T  621289 aaaattgattttgtaaaattgattttggttaaaattcagttgaatttaaagtgatttatgattggataccttcaaaacagaagtgatttttatgaaaac 621387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 22811147 - 22811056
Alignment:
Q  99 gaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata-cttcaaaacagaattgatt 188  Q
    |||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||| || |||||    
T  22811147 gaaaaaattgatcttggtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggataccttcaaaacaaaagtgatt 22811056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 2868350 - 2868411
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||| ||||||||||||||||||| ||||||||| |||||||| |||||||||||| |||||    
T  2868350 aattaattttgtagaattgattttagttaaaagtgagttgaatgtaaagtgatttaagtttg 2868411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 6988278 - 6988217
Alignment:
Q  103 aaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    |||||||||||||| ||||||||||  ||||||||||||||||| |||| ||||||||||||    
T  6988278 aaattgattttgtaaaattgattttaattaaaagtaagttgaatttaaaatgatttatgttt 6988217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 22482323 - 22482238
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||||||||  |||||||||||||||||||||| |||||||| | || ||||||||||||| ||||    
T  22482323 gagaattgattttgatagaattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 22482238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 38265109 - 38265061
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgtagaattgattttggttaaa 134  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  38265109 gagaattgattttgataaaattgattttgtagaattgattttggttaaa 38265061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 10273264 - 10273334
Alignment:
Q  100 aaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||||||||| |||| |||||  ||| |||| ||||||||||||| ||||||||| ||||||||    
T  10273264 aaaaaattgattttgtaaaattaattttacttataagtgagttgaatataaaatgatttatgcttgaatac 10273334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 24036689 - 24036623
Alignment:
Q  104 aattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata 169  Q
    ||||||||||| |||||||||||||| | |||||| |||||||| |||| |||||||||||||||||    
T  24036689 aattgattttgatagaattgattttgatgaaaagtgagttgaatgtaaaatgatttatgtttgaata 24036623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 13253038 - 13253145
Alignment:
Q  63 tgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgta-gaattgattttggttaaaagtaagttgaatataaagtgatttatg 161  Q
    |||||||||||||| ||   | ||||| |||||||||| | |||||| |||| | ||||||||||||||||||||| |||||||||| || ||| |||||    
T  13253038 tgtgtgtttggttgggcggtggcgagaattgattttgatagaattgagtttgaaagaattgattttggttaaaagtgagttgaatatgaattga-ttatg 13253136  T
Q  162 tttgaatac 170  Q
    |||| ||||    
T  13253137 tttggatac 13253145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 19784915 - 19784867
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  19784915 gaattgattttggttaaaagtgagttgaatgtaaagtggtttatgtttg 19784867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 5969955 - 5970005
Alignment:
Q  115 tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||||||| || |||| |||||||| ||||||||||||||||||    
T  5969955 tagaattgattttggatataagtgagttgaatgtaaagtgatttatgtttg 5970005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 2694717 - 2694797
Alignment:
Q  65 tgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttg-tagaattgattttggttaaaagtaagttga 144  Q
    ||||||||||| |||   ||||||| |||||||||  | ||||||||||| | ||||||||||||||||||||| ||||||    
T  2694717 tgtgtttggttatgcggtgacgagaattgattttgtcagaattgattttgattgaattgattttggttaaaagtgagttga 2694797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 33467975 - 33468055
Alignment:
Q  91 ttgattttgaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||| | ||||||||||||| ||||| ||||||||||||||||| |||||| | || | |||||| |||||| ||||    
T  33467975 ttgattttaacaaaattgattttgatagaactgattttggttaaaagtgagttgagtgtatattgatttgtgtttggatac 33468055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 40495341 - 40495421
Alignment:
Q  91 ttgattttgaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| | |||||| |||| || |||||||||||||||||||| ||||  || |||| ||||||||||||| ||||    
T  40495341 ttgattttgatagaattgagtttgatataattgattttggttaaaagtgagtttgatgtaaattgatttatgtttggatac 40495421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 2483697 - 2483772
Alignment:
Q  91 ttgattttgaaaaaattgattttgtag-aattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||| || | |||||||||||| | |||||||||| ||||||||| |||||||| | || |||||||||||||    
T  2483697 ttgatttggacataattgattttgttggaattgattttagttaaaagtgagttgaatgtgaattgatttatgtttg 2483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 19203958 - 19204069
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttat 160  Q
    ||||||||||||||| |||   ||||||| |||||||||  | ||||||||||  | |||||||| ||  ||||||| ||||| ||  |||||||||| |    
T  19203958 agtgtgtgtttggttatgcggtgacgagaattgattttggtagaattgattttacataattgattatgaataaaagtgagttggatgaaaagtgattttt 19204057  T
Q  161 gtttgaatactt 172  Q
    ||||| ||||||    
T  19204058 gtttggatactt 19204069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 172
Target Start/End: Complemental strand, 30364897 - 30364843
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatactt 172  Q
    |||||||||||| ||||||||||||||||||| |||| |||||| ||| |||||||    
T  30364897 gaattgattttgattaaaagtaagttgaatat-aagtaatttatatttaaatactt 30364843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 4292252 - 4292198
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||||| |||||| |||||||||| | || ||||||||||||| ||||    
T  4292252 agaattgattttgattaaaaataagttgaatgtgaattgatttatgtttggatac 4292198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 14299483 - 14299417
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||| |||| |||||||| | | ||||||| |||||||  ||||||||||| |||||||||||    
T  14299483 aattgattgtgtaaaattgattctagataaaagtgagttgaaggtaaagtgatttgtgtttgaatac 14299417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 28973986 - 28973948
Alignment:
Q  132 aaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  28973986 aaaagtgagttgaatataatgtgatttatgtttgaatac 28973948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 29923069 - 29922991
Alignment:
Q  92 tgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||  |||||||| |||| |||||||||||  || |||| |||||||| | |||| ||||||||||| ||||    
T  29923069 tgattttgaatgaattgattatgtaaaattgattttgactataagtgagttgaatgtgaagtaatttatgtttggatac 29922991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 3667988 - 3667903
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||| ||||  ||||||||||||| | |||||| |||||||| | || ||||||||||||| ||||    
T  3667988 gagaattgattttgatagaattgagtttgagagaattgattttgttaaaaagtgagttgaatgtgaattgatttatgtttggatac 3667903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 10058208 - 10058123
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||| ||||  || ||||||||||||||||||| ||||| | || || ||||||||||||| ||||    
T  10058208 gagaattgattttgatataattgagtttgagagtattgattttggttaaaagtgagttggaaatgaattgatttatgtttggatac 10058123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 11599779 - 11599718
Alignment:
Q  109 attttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||| || ||||||| |||||| ||||| ||||| | || ||||||||||||||||||    
T  11599779 attttgtaaaaatgattttagttaaatgtaagatgaatgttaactgatttatgtttgaatac 11599718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 32030848 - 32030791
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagtt 142  Q
    |||| |||||||||| | |||||| ||||  |||||||||||||||||||||||||||    
T  32030848 gagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtaagtt 32030791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 32051441 - 32051384
Alignment:
Q  113 tgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||| ||| ||||||||||| | ||||| ||||| ||||||||||||||||||    
T  32051441 tgtaaaatttattgtggttaaaagtgatttgaagataaaatgatttatgtttgaatac 32051384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 35760323 - 35760238
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||| ||||  ||||||||||||| | |||||| |||||||| | || ||||||||||||| ||||    
T  35760323 gagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttggatac 35760238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 5465398 - 5465458
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    ||||||||||||| |||||||||| | ||||||| | ||||||  ||| ||||||||||||    
T  5465398 aattgattttgtaaaattgattttagataaaagtgaattgaatgaaaaatgatttatgttt 5465458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 9275467 - 9275547
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| |||||||| |||   |||||||||||||||||||||| ||||  || | || ||||||||||||| ||||    
T  9275467 ttgattttgataaaattgagtttaagagaattgattttggttaaaagtgagttagatgttaattgatttatgtttggatac 9275547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 9e-20; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 91 - 199
Target Start/End: Original strand, 21023203 - 21023311
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac-ttcaaaacagaattgattt 189  Q
    |||||||||| | ||||||||| ||| ||||||||||||||||| || |||||||| | |||||||||||||||  |||| |||||||||||| ||||||    
T  21023203 ttgattttgatagaattgattt-gtaaaattgattttggttaaatgtgagttgaatttgaagtgatttatgtttagatactttcaaaacagaagtgattt 21023301  T
Q  190 tcatgaaaac 199  Q
    | ||||||||    
T  21023302 ttatgaaaac 21023311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 7012747 - 7012675
Alignment:
Q  99 gaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||| |||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||    
T  7012747 gaaaaaattaattttggtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggatac 7012675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 10852707 - 10852774
Alignment:
Q  99 gaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  10852707 gaaaaaattgattttggtataattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttg 10852774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 44225679 - 44225600
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||| | | |||||||||||||||||||||||| ||||||||| |||| ||| |||||||||||||||||| ||||    
T  44225679 ttgattttaatataattgattttgtagaattgattttcgttaaaagtgagtttaatgtaaagtgatttatgtttggatac 44225600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 10334261 - 10334173
Alignment:
Q  83 gacgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||| |||||||||| | |||||| ||||  |||||||||||||||||||||| |||||||||| || ||||||||||||| ||||    
T  10334261 gacgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtcagttgaatatgaattgatttatgtttggatac 10334173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 21261225 - 21261297
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtt 163  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||| ||| || ||||||| ||| ||||    
T  21261225 ttgattttgataaaattgattatgtagaattgattttggttaaaagtaatttggatttaaagtggtttgtgtt 21261297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 46864397 - 46864309
Alignment:
Q  102 aaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata-cttcaaaacagaattgattt 189  Q
    ||||||||||||| |||||||||||||||||||||| | || || |||||||| |||||||||| ||| ||||||| || |||||||||    
T  46864397 aaaattgattttgcagaattgattttggttaaaagtgattttaacataaagtggtttatgtttgtataccttcaaagcaaaattgattt 46864309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 23918949 - 23918882
Alignment:
Q  99 gaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||| |||||| ||||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  23918949 gaaaaaattaattttggtagaattaattttggttaaaagtgagttgaatgtaaagtgatttatgtttg 23918882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 31766162 - 31766241
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||  ||||||||||||| |||| ||||||| ||||||| |||||||  |||||||||||||||||| ||||    
T  31766162 ttgattttgaatgaattgattttgtaaaattaattttggataaaagtgagttgaagttaaagtgatttatgtttggatac 31766241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 10853248 - 10853328
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||| |||||||||| | |||||| ||||  |||||||||||||||||||||| |||| |||||||| |||||||||||||    
T  10853248 gagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtttaatataaattgatttatgtttg 10853328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 171
Target Start/End: Complemental strand, 23496462 - 23496351
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgattta 159  Q
    ||||||||||||||   ||  ||| |||| |||||||||| | |||||| ||||  |||||||||||||||||||||| |||||||| | || |||||||    
T  23496462 agtgtgtgtttggtatggcggcgaggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgattta 23496363  T
Q  160 tgtttgaatact 171  Q
    |||||| |||||    
T  23496362 tgtttggatact 23496351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 25181311 - 25181245
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||||||||||||||||| |||||||| |||| ||| |||| | ||||||||||| ||||    
T  25181311 aattgattttgtagaattgattttgattaaaagtgagtttaatgtaaaattatttatgtttggatac 25181245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 50664879 - 50664793
Alignment:
Q  85 cgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||| |||||||||| | |||||| ||||  |||||||||||||||||||||| |||||||| | || ||||||||||||| ||||    
T  50664879 cgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 50664793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 41459319 - 41459250
Alignment:
Q  102 aaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||||| | ||||||| ||||||||||||| | ||||| ||||| ||||||||||||||||||    
T  41459319 aaaattgattttgattgaattgactttggttaaaagtgatttgaagataaattgatttatgtttgaatac 41459250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 14651088 - 14651148
Alignment:
Q  91 ttgattttgaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataa 150  Q
    |||||||| | ||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  14651088 ttgattttaataaaattgattttgatagaattgattttgattaaaagtgagttgaatataa 14651148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 165
Target Start/End: Complemental strand, 42644382 - 42644302
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgtagaa-ttgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||| ||||||||||   |||||||||| || || |||||||| ||||||||| |||||||| ||||||||||||||||||    
T  42644382 gagaattgattttgagtgaattgattttataaaaattgattttagttaaaagtgagttgaatgtaaagtgatttatgtttg 42644302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 30958207 - 30958132
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaag-tgatttatgtttg 165  Q
    |||||||||||  ||||||||||||| |||||||||||| |||| || |||||||| ||||| | |||||||||||    
T  30958207 ttgattttgaatgaattgattttgtaaaattgattttggctaaatgtgagttgaatgtaaagtttatttatgtttg 30958132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 30974019 - 30973944
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaag-tgatttatgtttg 165  Q
    |||||||||||  ||||||||||||| |||||||||||| |||| || |||||||| ||||| | |||||||||||    
T  30974019 ttgattttgaatgaattgattttgtaaaattgattttggctaaatgtgagttgaatgtaaagtttatttatgtttg 30973944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 22737101 - 22737055
Alignment:
Q  118 aattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||    
T  22737101 aattgattttggttaaaagtaagtagaatgtaaattgatttatgttt 22737055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 32523262 - 32523323
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||  ||| ||||||||||| |||||||| ||||||| |||||||||||| ||||||    
T  32523262 aattgattaggtaaaattgattttgattaaaagttagttgaagataaagtgatttgtgtttg 32523323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 19877506 - 19877458
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    |||||||||||||||||||||| ||||| || |||| ||||||||||||    
T  19877506 agaattgattttggttaaaagtgagttggatgtaaattgatttatgttt 19877458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 29716674 - 29716742
Alignment:
Q  93 gattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttat 160  Q
    |||||||| |||||||| ||||  |||||||||||||||||||||| |||| ||||| || ||||||||    
T  29716674 gattttgataaaattgaatttgagagaattgattttggttaaaagtgagttaaatatgaattgatttat 29716742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 39657985 - 39658057
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtt 163  Q
    ||||||||||| ||||||||| |||| ||||||||||  ||||||||  ||||||| |||| | |||||||||    
T  39657985 ttgattttgaataaattgattatgtaaaattgattttacttaaaagttcgttgaatgtaaaataatttatgtt 39658057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 165
Target Start/End: Original strand, 41115251 - 41115351
Alignment:
Q  65 tgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    ||||||||||| ||   || ||||| |||||| ||||  ||||||||||||| |||||||||||| ||| | | |||||||| |||| || |||||||||    
T  41115251 tgtgtttggttttgtggcggcgagaattgattatgaatgaattgattttgtataattgattttggctaacaatgagttgaatgtaaaatggtttatgttt 41115350  T
Q  165 g 165  Q
    |    
T  41115351 g 41115351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 49526667 - 49526735
Alignment:
Q  103 aaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||| |||||||||||||| |||||||| | |||| | |||| ||||||||||||| ||||    
T  49526667 aaattgattttgatagaattgattttgattaaaagtgaattgattgtaaattgatttatgtttggatac 49526735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 54784502 - 54784462
Alignment:
Q  94 attttgaaaaaattgattttgtagaattgattttggttaaa 134  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  54784502 attttaaaaaaattgattttgtaaaattgattttggttaaa 54784462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 8802152 - 8802109
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaa 134  Q
    |||||||| | |||||||||| ||||||||||||||||||||||    
T  8802152 ttgattttaataaaattgattgtgtagaattgattttggttaaa 8802109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 31084309 - 31084242
Alignment:
Q  104 aattgattttgta-gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||| | |||||||||||| |||||||| |||||||| | || ||||||||||||| ||||    
T  31084309 aattgattttgaaagaattgattttgattaaaagtgagttgaatgtgaattgatttatgtttggatac 31084242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 53568046 - 53567967
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||   ||||||||||  | ||||||||||| |||||||| ||||||||  ||||| ||||||||||| ||||    
T  53568046 ttgattttgagtgaattgattttacaaaattgattttgattaaaagtgagttgaatgaaaagtaatttatgtttggatac 53567967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 24916639 - 24916581
Alignment:
Q  106 ttgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    ||||||||||| ||||||||  || ||||||| |||||||| |||| ||||||||||||    
T  24916639 ttgattttgtaaaattgattcaggctaaaagtgagttgaatgtaaaatgatttatgttt 24916581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 25129454 - 25129528
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||| |||||  ||||||| ||||| ||||||||  || ||||||| |||||||| ||| ||||||||||||||    
T  25129454 ttgatcttgaatgaattgatgttgtaaaattgattcaggataaaagtgagttgaatgtaacgtgatttatgtttg 25129528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 27825294 - 27825372
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata 169  Q
    |||||||||||  |||| ||||| || |||||||| ||  ||||||| ||||||||||||| | || ||||||||||||    
T  27825294 ttgattttgaatgaatttattttataaaattgattatgactaaaagttagttgaatataaaataatatatgtttgaata 27825372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 30811488 - 30811574
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaat 146  Q
    |||||||||||||| | ||   ||||||| |||||||||| | |||||| ||||  ||||||||||||| |||||||| ||||||||    
T  30811488 agtgtgtgtttggtagggcggtgacgagaattgattttgatataattgaatttgagagaattgattttgattaaaagtgagttgaat 30811574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 32932113 - 32932179
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||| ||||||||||||   |||||| ||||| | | |||| ||||||||||||||||||    
T  32932113 aattgattttgcagaattgattttacataaaagcaagttcagtgtaaattgatttatgtttgaatac 32932179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 53078472 - 53078398
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||   |||| ||||||||||||||||||| |||| || | ||||||| | ||| |||||||||||||    
T  53078472 ttgattttgattgaattaattttgtagaattgattttagttagaaatgagttgaacaaaaattgatttatgtttg 53078398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 1115008 - 1114935
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    |||||||||||  | |||||| | || | |||||||| | ||||| |||||||||||||||||||||| |||||    
T  1115008 ttgattttgaatgagttgattctataaacttgattttcgctaaaaataagttgaatataaagtgatttgtgttt 1114935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 3348331 - 3348278
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||||||| |||| ||||| || |||| ||||||||||||| ||||    
T  3348331 gaattgattttggttagaagtgagttggatgtaaattgatttatgtttggatac 3348278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 172
Target Start/End: Complemental strand, 4486926 - 4486845
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatactt 172  Q
    ||||||||||  ||||||||||| ||||| |||||||  |||||||| | || ||  || | ||||||||||||||||||||    
T  4486926 ttgattttgattaaattgattttatagaaatgattttaattaaaagtgaattaaacgtagaatgatttatgtttgaatactt 4486845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 26519784 - 26519699
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||| ||||  ||||||||||||| | |||||| |||||||| | || ||||||||||||| ||||    
T  26519784 gagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttatgtttggatac 26519699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 30301201 - 30301250
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||||| |||||||| |||||||| || ||||| |||||||||    
T  30301201 agaattgattttgattaaaagtgagttgaatgtatagtgaattatgtttg 30301250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 33548394 - 33548341
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||| ||| ||||  |||||||||| |||| ||||||||||||||||    
T  33548394 gaattgattttagtttaaagggagttgaatatgaagtaatttatgtttgaatac 33548341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 38340894 - 38340845
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||||||||||||||||| ||||| || | || |||||||||||||    
T  38340894 agaattgattttggttaaaagtgagttggatgtgaattgatttatgtttg 38340845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 46853475 - 46853520
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatgt 162  Q
    ||||||||||||| || ||||||||||||  |||||||||||||||    
T  46853475 gaattgattttggctacaagtaagttgaaggtaaagtgatttatgt 46853520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 23207054 - 23207134
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| | |||||||||||| | |||||||||||||||||| | ||||  || | || ||||||||||||| ||||    
T  23207054 ttgattttgatataattgattttgttataattgattttggttaaaaatgagtttgatgtgaattgatttatgtttggatac 23207134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 34561195 - 34561143
Alignment:
Q  118 aattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||||||||||| ||||||||   || ||||||||||||| ||||    
T  34561195 aattgattttggttaaaagtgagttgaatgcgaattgatttatgtttggatac 34561143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 35425456 - 35425392
Alignment:
Q  83 gacgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaat 146  Q
    ||||||| |||||||||| | |||||| ||||  ||||||||||||| |||||||| ||||||||    
T  35425456 gacgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttgaat 35425392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 48189428 - 48189507
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| | |||||| ||||  ||||||||||||| |||||||| |||||||| |||| ||| ||||||||| ||||    
T  48189428 ttgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttgaatgtaaattga-ttatgtttggatac 48189507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 53179935 - 53179883
Alignment:
Q  118 aattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||||||||||| ||||  || |||| ||||||||||||| ||||    
T  53179935 aattgattttggttaaaagtgagtttgatgtaaattgatttatgtttggatac 53179883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 3605738 - 3605812
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||||| | ||||||||||||||||||||||||| |||||||| |||||| |  |||||||||||||||||    
T  3605738 ttgattttgatataattgattttgtagaattgattttgattaaaagtgagttgagtgaaaagtgatttatgtttg 3605812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 16121987 - 16122067
Alignment:
Q  91 ttgattttgaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||| | |||| | |||  |||||| |||||||||||    
T  16121987 ttgattttgataaaattgattttgatagaattgattttggttaaaagtgatttgagtgtaagttgatttgtgtttgaatac 16122067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 1500070 - 1499991
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||   ||||||||||||| |||||||||||| ||||||  |||||| | |||| ||||||||||||||||||    
T  1500070 ttgattttgactgaattgattttgtaaaattgattttggctaaaagcgagttgagtgtaaattgatttatgtttgaatac 1499991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 17829979 - 17830058
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    |||| |||||||||| | |||||| ||||  |||||||||||||||||||||| |||||||| | || ||||||||||||    
T  17829979 gagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgttt 17830058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 16548228 - 16548174
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||||||||||||| |||||||| | || ||||||||||||| ||||    
T  16548228 agaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 16548174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 2928085 - 2928154
Alignment:
Q  95 ttttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    |||||||| ||||||||||||||||||||||| ||| |||||| |||| ||  ||| |||| ||||||||    
T  2928085 ttttgaaagaattgattttgtagaattgatttaggtgaaaagtgagtttaagttaaggtgacttatgttt 2928154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 16540282 - 16540229
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaa 139  Q
    |||| |||||||||| | |||||||| |||||||||||||||||||| ||||||    
T  16540282 gagaattgattttgatagaattgattatgtagaattgattttggttagaagtaa 16540229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 4911078 - 4910999
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagt-tgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| | |||||||| | ||||||| ||||||||||||||||| | ||| || ||||||||||||||||| ||||    
T  4911078 ttgattttgatagaattgattctctagaattaattttggttaaaagtaattctgacta-aaagtgatttatgtttggatac 4910999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 10826203 - 10826131
Alignment:
Q  94 attttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||| |||||||| ||||  |||||||||||||||||||||| |||||||| | || |||||| ||||||    
T  10826203 attttgataaaattgagtttgagagaattgattttggttaaaagtgagttgaatttgaattgatttttgtttg 10826131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 19260799 - 19260878
Alignment:
Q  92 tgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatact 171  Q
    ||||||||||  | ||| || |||| |||||||| ||| ||||| | |||||||||||||| ||||||||||| ||||||    
T  19260799 tgattttgaatgatttggttctgtaaaattgattctggctaaaattgagttgaatataaagggatttatgtttaaatact 19260878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 34025777 - 34025824
Alignment:
Q  114 gtagaattgattttggttaaaagtaagttgaatataaagtgatttatg 161  Q
    |||||||||||||||| ||||||| |||||||| |||||||| |||||    
T  34025777 gtagaattgattttggctaaaagttagttgaatgtaaagtgagttatg 34025824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 9043732 - 9043774
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaat 146  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||    
T  9043732 aattgattttgtataattgattttagttaaaagtgagttgaat 9043774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 26692426 - 26692484
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgt 162  Q
    ||||||||||||| ||| ||||||||  |||||| ||||||||||||| || |||||||    
T  26692426 aattgattttgtaaaatagattttggcaaaaagtgagttgaatataaactggtttatgt 26692484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 1758305 - 1758256
Alignment:
Q  111 tttgtagaattgattttggttaaaagtaagttgaatataaagtgatttat 160  Q
    |||||| |||||||||| ||||||| |||||||||  |||||||||||||    
T  1758305 tttgtaaaattgattttagttaaaattaagttgaaactaaagtgatttat 1758256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 5584005 - 5584109
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgattta 159  Q
    |||||||||| |||| |||   ||||||| |||||||||| | |||||||||||  |||||||||||||  ||||||| |||| ||| | || |||||||    
T  5584005 agtgtgtgttaggttctgcggtgacgagaattgattttgatagaattgattttgacagaattgattttgactaaaagtgagtttaatgt-aattgattta 5584103  T
Q  160 tgtttg 165  Q
    ||||||    
T  5584104 tgtttg 5584109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 21455995 - 21455942
Alignment:
Q  91 ttgattttgaaaaaattgattttgta-gaattgattttggttaaaagtaagttg 143  Q
    |||||||||| | |||||| |||||| ||||||||||| |||||||||||||||    
T  21455995 ttgattttgatataattgagtttgtaagaattgattttagttaaaagtaagttg 21455942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 29399774 - 29399835
Alignment:
Q  86 gagatttgattttgaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaat 146  Q
    |||| |||||||||| | |||||| |||| |||||||||||||||| || ||||||||||||    
T  29399774 gagaattgattttgatagaattgagtttgatagaattgattttggtaaagagtaagttgaat 29399835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 33898986 - 33899071
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||| ||||  ||||||||||||| |||||||| ||||  |||| || ||||||||||||| ||||    
T  33898986 gagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtttgatatgaattgatttatgtttggatac 33899071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 10054950 - 10055054
Alignment:
Q  62 gtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatg 161  Q
    |||||||||||||| |||   ||| | | |||||||||||  ||||| ||||||| ||||||| || ||||||| | |||||  | ||||||| ||||||    
T  10054950 gtgtgtgtttggttttgcggtgacaaaagttgattttgaatgaattggttttgtaaaattgatattagttaaaattgagttgcttgtaaagtggtttatg 10055049  T
Q  162 tttga 166  Q
    |||||    
T  10055050 tttga 10055054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 39634108 - 39634213
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgattta 159  Q
    ||||||||||||||| |||   |  |||| ||||||| || | |||||||||||| |||||||||||||||||||||| |||||||||| || |||||||    
T  39634108 agtgtgtgtttggttctgcggtggagagaattgatttggacagaattgattttgttagaattgattttggttaaaagtgagttgaatatgaattgattta 39634207  T
Q  160 tgtttg 165  Q
    ||||||    
T  39634208 tgtttg 39634213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 44967366 - 44967452
Alignment:
Q  85 cgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||| |||||||||| | |||||| ||||  |||||||||||||||||||||| |||||||| | || ||||||||||||||||||    
T  44967366 cgagaattgattttgatataattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttgaatac 44967452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 36920154 - 36920231
Alignment:
Q  94 attttgaaaaaattgattttgta-gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||| |||||||| |||| | ||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||    
T  36920154 attttgataaaattgagtttgaaagaattgattttggttaaaagtgagttagatataaattgatttatgtttgaatac 36920231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 42752164 - 42752244
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| | |||||||||||| |||||||||||| ||||||||| |||||||| | || ||||||||||||| ||||    
T  42752164 ttgattttgacagaattgattttgttagaattgatttttgttaaaagtgagttgaatgtgaattgatttatgtttggatac 42752244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 15311190 - 15311269
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||  |||||||| |||| |||||| | ||||||||||| |||||||| || ||||||||||||||| ||||    
T  15311190 ttgattttgaactaattgattgtgtaaaattgaatatggttaaaagtgagttgaatgtatagtgatttatgtttggatac 15311269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 20089005 - 20088930
Alignment:
Q  91 ttgattttgaaaaaattgatttt-gtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||||| | |||||||||  ||| |||||||||||||||||||| |||||||  ||||||||||||||||||    
T  20089005 ttgattttgatagaattgatttaagtataattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttg 20088930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 44274762 - 44274699
Alignment:
Q  102 aaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||||| | |||||||||||||||||||| |||| || ||||| |||||||||||||    
T  44274762 aaaattgattttgcataattgattttggttaaaagtgagtttaagataaaatgatttatgtttg 44274699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 16079524 - 16079463
Alignment:
Q  105 attgatttt-gtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||  |||||||||||||||||    
T  16079524 attgattttagtagaattgattttggtttaaagtgagttgaatgaaaagtgatttatgtttg 16079463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 48459851 - 48459766
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||| |||||||||| | |||||| ||||  |||||||||||||||||||||| |||||||| | || ||||||||||||| ||||    
T  48459851 gagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 48459766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 10371926 - 10372006
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||| |||||||||| | |||||| ||||  |||||||||||||||||||||| |||||||| | || |||||||||||||    
T  10371926 gagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttg 10372006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 33936794 - 33936902
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata-cttcaaaacagaattgattt 189  Q
    |||||||||  | ||||||||| ||||||||  |||||||| ||||| | |||||| ||||||||||||||||||  || |||||||||| || ||||||    
T  33936794 ttgattttggtagaattgatttcgtagaattacttttggttcaaagttaattgaatgtaaagtgatttatgtttgcttaccttcaaaacaaaagtgattt 33936893  T
Q  190 tcatgaaaa 198  Q
      |||||||    
T  33936894 gtatgaaaa 33936902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 38494341 - 38494277
Alignment:
Q  102 aaaattgattttgta-gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||| | ||||| ||||||||||    
T  38494341 aaaattgattttgtttgaattgattttggttaaaagtgagttgaatgtgaagtggtttatgtttg 38494277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 42740502 - 42740454
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgttt 164  Q
    ||||||||||||||||||||||||||||||| | || ||||||||||||    
T  42740502 agaattgattttggttaaaagtaagttgaatgttaattgatttatgttt 42740454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 47022055 - 47021975
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| | |||||| ||||  ||||||||||||||||||||||||||||||  | || ||||||||||||| ||||    
T  47022055 ttgattttgatagaattgagtttgagagaattgattttggttaaaagtaagttgaaagtgaattgatttatgtttggatac 47021975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 38510364 - 38510415
Alignment:
Q  118 aattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaata 169  Q
    ||||| |||||  ||||||| |||||||||||||||||||||||||||||||    
T  38510364 aattgtttttgaataaaagtgagttgaatataaagtgatttatgtttgaata 38510415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 3622427 - 3622513
Alignment:
Q  85 cgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||| |||||||||| | |||||| ||||  |||||||||||||||||||||| ||||| || | || ||||||||||||| ||||    
T  3622427 cgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 3622513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 4228669 - 4228603
Alignment:
Q  104 aattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||  | ||||||||||| |||||||| ||||||||  ||||||||||||||||| ||||    
T  4228669 aattgattttacataattgattttgattaaaagtgagttgaatgaaaagtgatttatgtttggatac 4228603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 34010481 - 34010396
Alignment:
Q  85 cgagatttgattttgaaaaaattgattttgta-gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||| |||||||||| | |||||| |||| | ||||||||||||||||||||| ||||| |||| || ||| ||||||||||||||    
T  34010481 cgagaattgattttgatagaattgagtttgaaagaattgattttggttaaaagtgagttggatatgaactga-ttatgtttgaatac 34010396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 38230178 - 38230124
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||||||||||||| |||||||| | || ||||||||||||| ||||    
T  38230178 agaattgattttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 38230124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 36271113 - 36271060
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||| ||||||||||||||||| | ||||| |||| ||||||||||    
T  36271113 gaattgattttgcttaaaagtaagttgaatgttaagtggtttacgtttgaatac 36271060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 7169075 - 7169007
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgattta 159  Q
    |||||||| ||  |||||||||| |  |||||||||||||||||||| |||||||| ||||||| ||||    
T  7169075 ttgattttaaattaattgattttttgaaattgattttggttaaaagtgagttgaatgtaaagtggttta 7169007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 165
Target Start/End: Complemental strand, 37639571 - 37639491
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||| |||||||||| | |||||| ||||  |||||||||||||||||||||| | |||||| | || |||||||||||||    
T  37639571 gagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgaattgaatgtgaattgatttatgtttg 37639491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 12306866 - 12306819
Alignment:
Q  118 aattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||| ||| ||||||| ||||||| |||||||||||||||||||    
T  12306866 aattgattctggctaaaagtgagttgaagataaagtgatttatgtttg 12306819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 16353563 - 16353484
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggtt-aaaagtaagttgaatataaagtgatttatgtttgaata 169  Q
    |||||| ||| | ||||||||||| |||||||||||| | | |||||| |||| ||| ||||||| ||||||||||||||    
T  16353563 ttgattctgatagaattgattttgcagaattgatttttgatgaaaagtgagtttaatctaaagtggtttatgtttgaata 16353484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 33746497 - 33746450
Alignment:
Q  118 aattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||||||| |||||||| ||||||||||||| |||||| ||||||    
T  33746497 aattgattttgattaaaagtgagttgaatataaattgatttttgtttg 33746450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 40491748 - 40491669
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||   |||||||| |||| |||||||||||  ||||||| |||||||  ||||||||||||| |||| ||||    
T  40491748 ttgattttgagtgaattgattctgtaaaattgattttgactaaaagtgagttgaaggtaaagtgatttatttttggatac 40491669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 3342900 - 3342846
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||| ||||||||| ||||| |||| || ||||||||||||| ||||    
T  3342900 agaattgattttagttaaaagtgagttggatatgaattgatttatgtttggatac 3342846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 3750796 - 3750742
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||||||||||||||| ||||| || | || ||||||||||||| ||||    
T  3750796 agaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatac 3750742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 29829293 - 29829363
Alignment:
Q  101 aaaaattgattttgta-gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||||||| || | ||||||||| ||| ||||| | |||||||| |||||||||||||||||| ||||    
T  29829293 aaaaattgattctgaatgaattgattctggctaaaaatgagttgaatgtaaagtgatttatgtttggatac 29829363  T

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Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 26975301 - 26975350
Alignment:
Q  121 tgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    ||||||| |||| |||| |||||||| |||| ||||||||||||||||||    
T  26975301 tgattttagttataagtgagttgaatgtaaaatgatttatgtttgaatac 26975350  T

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Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 165
Target Start/End: Complemental strand, 41715799 - 41715718
Alignment:
Q  85 cgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||| |||||||||| | ||||||||||   ||||||||||||| |||||||| ||||  || |||| |||||||||||||    
T  41715799 cgagaattgattttgatagaattgattttaagagaattgattttgattaaaagtgagttagatgtaaattgatttatgtttg 41715718  T

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Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 31625604 - 31625560
Alignment:
Q  93 gattttgaaaaaattgattttgtagaattgattttggttaaaagt 137  Q
    |||||||| | |||| ||| |||||||||||||||||||||||||    
T  31625604 gattttgatagaattaattctgtagaattgattttggttaaaagt 31625560  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 39391110 - 39391162
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagtt 142  Q
    |||||||||| | |||||||||| | |||||||||||||||||||||| ||||    
T  39391110 ttgattttgatagaattgatttttttagaattgattttggttaaaagtgagtt 39391162  T

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Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 145
Target Start/End: Original strand, 40903112 - 40903196
Alignment:
Q  62 gtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaa 145  Q
    |||||||||||||| | ||  | ||| | |||||||||| | ||||||||||| ||||||||||||||  ||||||| |||||||    
T  40903112 gtgtgtgtttggttttccagtggcgaaaattgattttgacataattgattttgatagaattgattttgcctaaaagtgagttgaa 40903196  T

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Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 44856716 - 44856780
Alignment:
Q  101 aaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||||||| ||| | |||||| ||  ||||||| |||||||| ||||| ||||||||||||    
T  44856716 aaaaattgatttggtaaagttgattctgcctaaaagtgagttgaatgtaaagcgatttatgtttg 44856780  T

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Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 46541736 - 46541660
Alignment:
Q  91 ttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttga 166  Q
    |||||||||| | |||||| ||||  ||||||||||||||||| |||| |||||||| | || || |||||||||||    
T  46541736 ttgattttgatagaattgagtttgagagaattgattttggttagaagtgagttgaatgtgaattggtttatgtttga 46541660  T

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Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 170
Target Start/End: Complemental strand, 253273 - 253163
Alignment:
Q  61 agtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaatataaagtgattta 159  Q
    |||||||||||||||| ||  ||  |||| |||||||||| | |||||| ||||  ||||||||||||||||||| || ||||| |||| || |||||||    
T  253273 agtgtgtgtttggttgggcggcggagagaattgattttgatagaattgagtttgagagaattgattttggttaaatgtgagttggatatgaattgattta 253174  T
Q  160 tgtttgaatac 170  Q
    |||||| ||||    
T  253173 tgtttggatac 253163  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 199381 - 199430
Alignment:
Q  116 agaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  199381 agaattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttg 199430  T

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Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 65611 - 65540
Alignment:
Q  94 attttgaaaaaattgattttgtagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    ||||||| | |||||||| |||  |||||||||||||||||| | |||| ||| ||||||||||||||||||    
T  65611 attttgatagaattgattctgtgaaattgattttggttaaaaatgagtttaatgtaaagtgatttatgtttg 65540  T

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Target: scaffold0168 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 31999 - 31951
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaagtaa 139  Q
    |||||||||| | |||||||| |||||||||||||||||||| ||||||    
T  31999 ttgattttgatagaattgattatgtagaattgattttggttagaagtaa 31951  T

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Target: scaffold0168; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 32078 - 32035
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaa 134  Q
    |||||||||| | |||||||| ||||||||||||||||||||||    
T  32078 ttgattttgatagaattgattatgtagaattgattttggttaaa 32035  T

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Target: scaffold0394 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 5811 - 5872
Alignment:
Q  86 gagatttgattttgaaaaaattgattttgt-agaattgattttggttaaaagtaagttgaat 146  Q
    |||| |||||||||| | |||||| ||||  |||||||||||||||||||||| ||||||||    
T  5811 gagaattgattttgatataattgagtttgagagaattgattttggttaaaagtgagttgaat 5872  T

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Target: scaffold0369 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 8564 - 8484
Alignment:
Q  91 ttgattttgaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaatataaagtgatttatgtttgaatac 170  Q
    |||||||||| | |||||| |||| || |||||||||||||||||||| ||||  || | || ||||||||||||| ||||    
T  8564 ttgattttgatagaattgagtttgatataattgattttggttaaaagtgagtttgatgtgaattgatttatgtttggatac 8484  T

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Target: scaffold0184 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 7394 - 7350
Alignment:
Q  91 ttgattttgaaaaaattgattttgtagaattgattttggttaaaa 135  Q
    ||||||||||  |||||||||||| |||||||||||| |||||||    
T  7394 ttgattttgattaaattgattttgcagaattgattttagttaaaa 7350  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 46906 - 46822
Alignment:
Q  62 gtgtgtgtttggttgtgcaacgacgagatttgattttgaaaaaattgattttg-tagaattgattttggttaaaagtaagttgaa 145  Q
    |||||||||||||| | ||  | ||| | |||||||||| | ||||||||||| ||||||||||||||  ||||||| |||||||    
T  46906 gtgtgtgtttggttttccagtggcgaaaattgattttgacataattgattttgatagaattgattttgcctaaaagtgagttgaa 46822  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 301613 - 301565
Alignment:
Q  117 gaattgattttggttaaaagtaagttgaatataaagtgatttatgtttg 165  Q
    |||||||||||||| |||||| |||||| |||||| | |||||||||||    
T  301613 gaattgattttggtcaaaagtgagttgagtataaatttatttatgtttg 301565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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