View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17343_low_11 (Length: 456)

Name: NF17343_low_11
Description: NF17343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17343_low_11
NF17343_low_11
[»] chr6 (10 HSPs)
chr6 (7-439)||(17540291-17540721)
chr6 (45-269)||(15304190-15304409)
chr6 (94-218)||(15308153-15308277)
chr6 (94-218)||(15313447-15313571)
chr6 (284-439)||(34010937-34011095)
chr6 (286-439)||(34013755-34013911)
chr6 (285-389)||(14494169-14494272)
chr6 (338-393)||(19294653-19294707)
chr6 (285-327)||(19294701-19294743)
chr6 (338-421)||(12844196-12844282)
[»] chr7 (2 HSPs)
chr7 (285-440)||(22291082-22291240)
chr7 (338-426)||(44572314-44572405)
[»] chr2 (5 HSPs)
chr2 (285-361)||(41849343-41849419)
chr2 (298-415)||(34409326-34409446)
chr2 (285-361)||(17651605-17651681)
chr2 (338-389)||(26576391-26576441)
chr2 (285-327)||(26576435-26576477)
[»] chr4 (3 HSPs)
chr4 (284-439)||(55680954-55681113)
chr4 (338-421)||(54305911-54305998)
chr4 (311-360)||(24663033-24663082)
[»] chr3 (2 HSPs)
chr3 (285-361)||(43921667-43921743)
chr3 (280-361)||(27044351-27044432)
[»] chr8 (2 HSPs)
chr8 (279-420)||(18393289-18393434)
chr8 (297-361)||(27402646-27402710)
[»] chr1 (1 HSPs)
chr1 (297-361)||(30882702-30882766)


Alignment Details
Target: chr6 (Bit Score: 340; Significance: 0; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 7 - 439
Target Start/End: Complemental strand, 17540721 - 17540291
Alignment:
Q  7 gttgcacaactggataaggttgttg---aagcagggcagatgaatgaagaatatgaggaacaacaatttggaaaaaatatggttgttcctgaagaaatgg 103  Q
    |||||||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17540721 gttgcacaactggataaggttgttgttgaagaagggcagatgaatgaagaatatgaggaacaacaagttggaaaaaatatggttgttcctgaagaaatgg 17540622  T
Q  104 tgcaagaacaggtacttacattattgcattttttattaacaaaactg-taagtgtaacccttgagtcaataatgcaatatttatttatttattgtagcct 202  Q
    |||||||||||||||||| ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17540621 tgcaagaacaggtacttagattattgcattttttgttaacaatactgttaagtgtaacccttgagtcaataatgcaatatttatttatttattgtagcct 17540522  T
Q  203 gtaattgctgggaacactgttgaacttgaacatattcatgatcatgcagaagcacatgcccagccagaaagagtttataacatatgaagcacatacacct 302  Q
    |||||||||||||||||||      ||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  17540521 gtaattgctgggaacactg------ttgaacatattcatgatcatgcagaagcacatgccaagccggtaagagtttataacatatgaagcacatacacct 17540428  T
Q  303 ctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccggtgtccaaataatgtttt 402  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17540427 ctaggattagacgtgtcgcagtgtccgatacgcatcggtgtccgacactcctatgacaccgcgtacaacacgagtcgaaccggtgtccaaataatgtttt 17540328  T
Q  403 tctttacttcgactctccttcgattggtatctgacac 439  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  17540327 tctttactttgactctccttcgatcggtatctgacac 17540291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 45 - 269
Target Start/End: Original strand, 15304190 - 15304409
Alignment:
Q  45 gaatgaagaatatgaggaacaacaatttggaaaaaatatggttgttcctgaagaaatggtgcaagaacaggtacttacattattgcatttttt-attaac 143  Q
    ||||||||||| ||| ||||||||| || ||| ||||||| ||| | |||||||||| |||||||||||||||| || ||||||||||||||| | ||||    
T  15304190 gaatgaagaatctgatgaacaacaagttagaagaaatatgattgatgctgaagaaattgtgcaagaacaggtacctagattattgcatttttttactaac 15304289  T
Q  144 aaaactgtaagtgtaacccttgagtcaataatgcaatatttatttatttattgtagcctgtaattgctgggaacactgttgaacttgaacatattcatga 243  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||||||||| ||||| ||||||||||||||||||      ||||||||||||||||    
T  15304290 aaaactataagtgtaacccttgagtcaataatacaagatttatttatttattgcagcctataattgctgggaacactg------ttgaacatattcatga 15304383  T
Q  244 tcatgcagaagcacatgcccagccag 269  Q
    ||||||||||| ||||||||| ||||    
T  15304384 tcatgcagaagaacatgcccaaccag 15304409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 15308277 - 15308153
Alignment:
Q  94 gaagaaatggtgcaagaacaggtacttacattattgcattttttattaacaaaactgtaagtgtaacccttgagtcaataatgcaatatttatttattta 193  Q
    ||||||||||||||||||| |||||||| | | |||||||||||| |||| ||| | |||||||||||||||||| |||||| ||| ||||| |||||||    
T  15308277 gaagaaatggtgcaagaactggtacttagagtgttgcattttttactaactaaattataagtgtaacccttgagtaaataatacaagatttaattattta 15308178  T
Q  194 ttgtagcctgtaattgctgggaaca 218  Q
     ||||||||||||||| || |||||    
T  15308177 atgtagcctgtaattgttgcgaaca 15308153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 15313571 - 15313447
Alignment:
Q  94 gaagaaatggtgcaagaacaggtacttacattattgcattttttattaacaaaactgtaagtgtaacccttgagtcaataatgcaatatttatttattta 193  Q
    ||||||||||||||||||| |||||||| | | |||||||||||| |||| ||| | |||||||||||||||||| |||||| ||| ||||| |||||||    
T  15313571 gaagaaatggtgcaagaactggtacttagagtgttgcattttttactaactaaattataagtgtaacccttgagtaaataatacaagatttaattattta 15313472  T
Q  194 ttgtagcctgtaattgctgggaaca 218  Q
     ||||||||||||||| || |||||    
T  15313471 atgtagcctgtaattgttgcgaaca 15313447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 439
Target Start/End: Original strand, 34010937 - 34011095
Alignment:
Q  284 atatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtcgaacc 383  Q
    |||||||||||  ||||||| |||| ||| |||||||||||||| || |||| ||||||||| ||||||| |||||||   || | ||||| ||||||||    
T  34010937 atatgaagcacggacacctcaaggactaggcgtgtcgcggtgtccgacacgcgtcggtgtccgacactccaatgacactt-gtgcgacacgtgtcgaacc 34011035  T
Q  384 ggtgtcc-aaataatg---tttttctttacttcgactctccttcgattggtatctgacac 439  Q
    ||||||| |||||||    ||||||||||||||||| ||||| |||||||| || |||||    
T  34011036 ggtgtcctaaataattgtttttttctttacttcgacactcctacgattggtgtccgacac 34011095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 439
Target Start/End: Complemental strand, 34013911 - 34013755
Alignment:
Q  286 atgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccgg 385  Q
    |||||||||  ||||||| |||| ||| |||||||||||||| || | || ||||||||| ||||||| |||||| |  |||| ||||| ||||||||||    
T  34013911 atgaagcacggacacctcaaggactaggcgtgtcgcggtgtccgacaagcgtcggtgtccgacactccaatgaca-cttgtacgacacgtgtcgaaccgg 34013813  T
Q  386 tgtcc-aaataa---tgtttttctttacttcgactctccttcgattggtatctgacac 439  Q
    ||||| ||||||   | ||||||||||||||||| ||||| |||||||| || |||||    
T  34013812 tgtcctaaataattgtttttttctttacttcgacactcctacgattggtgtccgacac 34013755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 389
Target Start/End: Original strand, 14494169 - 14494272
Alignment:
Q  285 tatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccg 384  Q
    ||||||||||  |||||||||||| |||||||||| |||| || || |||| |||  |||| |||||||||||||||| ||||| ||||| ||||||||     
T  14494169 tatgaagcacggacacctctaggactagacgtgtcacggtatccgacacgcgtcgaggtccgacactcctatgacacc-cgtacgacacgtgtcgaacca 14494267  T
Q  385 gtgtc 389  Q
    |||||    
T  14494268 gtgtc 14494272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 393
Target Start/End: Complemental strand, 19294707 - 19294653
Alignment:
Q  338 cggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccggtgtccaaa 393  Q
    |||||||| |||||||| ||||||| ||||| ||||| ||||||||||||||||||    
T  19294707 cggtgtccgacactcctgtgacacc-cgtacgacacgtgtcgaaccggtgtccaaa 19294653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 327
Target Start/End: Complemental strand, 19294743 - 19294701
Alignment:
Q  285 tatgaagcacatacacctctaggattagacgtgtcgcggtgtc 327  Q
    ||||||||||  |||||||||||||||| ||||||||||||||    
T  19294743 tatgaagcaccgacacctctaggattaggcgtgtcgcggtgtc 19294701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 421
Target Start/End: Complemental strand, 12844282 - 12844196
Alignment:
Q  338 cggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccggtgtcc-aaataatg---tttttctttacttcgactctcct 421  Q
    |||||||| |||||||||| |||||  |||| ||||| ||||||||||||||| |||||||    ||||||||||||||||| |||||    
T  12844282 cggtgtccgacactcctataacacct-gtacgacacgtgtcgaaccggtgtcctaaataattggttttttctttacttcgacactcct 12844196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 440
Target Start/End: Complemental strand, 22291240 - 22291082
Alignment:
Q  285 tatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccg 384  Q
    ||||||||||  | |||||||||| ||| | |||||| ||||| || |||| ||||||||| |||||||||||||||| ||||| ||||| || ||||||    
T  22291240 tatgaagcacggaaacctctaggactaggcatgtcgcagtgtccgacacgcgtcggtgtccgacactcctatgacacc-cgtaccacacgtgttgaaccg 22291142  T
Q  385 gtgtcc-aaataa---tgtttttctttacttcgactctccttcgattggtatctgacacg 440  Q
    |||||| ||||||   | ||||||||||||||||| ||||| |||| |||||| ||||||    
T  22291141 gtgtcctaaataattgtttttttctttacttcgacactcctacgatcggtatccgacacg 22291082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 426
Target Start/End: Original strand, 44572314 - 44572405
Alignment:
Q  338 cggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccggtgtcc-aaata---atgtttttctttacttcgactctccttcgat 426  Q
    |||||||| |||||||||||||| | ||||| ||||| ||||||||||||||| |||||   || ||||||||||||||||| ||||| ||||    
T  44572314 cggtgtccgacactcctatgaca-ctcgtacgacacgtgtcgaaccggtgtcctaaatacttatttttttctttacttcgacactcctacgat 44572405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 41849419 - 41849343
Alignment:
Q  285 tatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacac 361  Q
    ||||||||||  |||||||||| ||||| |||||||||||||| || |||| ||||||||| |||||||||||||||    
T  41849419 tatgaagcacggacacctctagaattaggcgtgtcgcggtgtcagacacgcgtcggtgtccgacactcctatgacac 41849343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 415
Target Start/End: Original strand, 34409326 - 34409446
Alignment:
Q  298 cacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccggtgtcc-aaataa 396  Q
    ||||||||||| ||| |||||||||||||| || |||| | | ||||| |||||||||||| ||| ||||| ||||| ||| ||||||||||| ||||||    
T  34409326 cacctctaggactaggcgtgtcgcggtgtcggacacgcgttgatgtccgacactcctatgatacc-cgtacgacacgtgtcaaaccggtgtcctaaataa 34409424  T
Q  397 ---tgtttttctttacttcgac 415  Q
       | |||||||||||||||||    
T  34409425 ttgtttttttctttacttcgac 34409446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 17651681 - 17651605
Alignment:
Q  285 tatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacac 361  Q
    ||||||||||  |||||| ||||||||| |||||||||||||| || |||| || |||||| |||||| ||||||||    
T  17651681 tatgaagcacggacacctttaggattaggcgtgtcgcggtgtccgacacgcgtcagtgtccgacactcttatgacac 17651605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 26576441 - 26576391
Alignment:
Q  338 cggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccggtgtc 389  Q
    |||||||| |||||||||||||||| ||||| ||||| ||||||||||||||    
T  26576441 cggtgtccgacactcctatgacacc-cgtacgacacgtgtcgaaccggtgtc 26576391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 327
Target Start/End: Complemental strand, 26576477 - 26576435
Alignment:
Q  285 tatgaagcacatacacctctaggattagacgtgtcgcggtgtc 327  Q
    ||||||||||  |||||||||||| ||||||||||||||||||    
T  26576477 tatgaagcacggacacctctaggactagacgtgtcgcggtgtc 26576435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 7e-16; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 284 - 439
Target Start/End: Complemental strand, 55681113 - 55680954
Alignment:
Q  284 atatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtcgaacc 383  Q
    |||||||||||  ||||||| |||| ||| |||||||||||||| || |||| ||||||||| |||||||||||||| |  |||| ||||  ||||||||    
T  55681113 atatgaagcacggacacctcgaggactaggcgtgtcgcggtgtccgacacgcgtcggtgtccgacactcctatgaca-cttgtacgacacatgtcgaacc 55681015  T
Q  384 ggtgtcc-aaataa----tgtttttctttacttcgactctccttcgattggtatctgacac 439  Q
    | ||||| ||||||    | ||||||||||||||||| ||||| |||| ||| || |||||    
T  55681014 gctgtcctaaataattgttttttttctttacttcgacactcctacgatcggtgtccgacac 55680954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 421
Target Start/End: Complemental strand, 54305998 - 54305911
Alignment:
Q  338 cggtgtccaacactcctatgacaccgcgtacaacacgagtcgaaccggtgtcc-aaataa-tgtttt---tctttacttcgactctcct 421  Q
    |||||||| |||||||||||||||| ||||| ||||| ||||||||| ||||| |||||| ||||||   ||||||||||||| |||||    
T  54305998 cggtgtccgacactcctatgacacc-cgtacgacacgtgtcgaaccgatgtcctaaataattgttttttgtctttacttcgacactcct 54305911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 24663082 - 24663033
Alignment:
Q  311 agacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgaca 360  Q
    ||||||||||||||||| ||||| ||||| | |||||||||| |||||||    
T  24663082 agacgtgtcgcggtgtccgatacacatcgatttccaacactcatatgaca 24663033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 361
Target Start/End: Original strand, 43921667 - 43921743
Alignment:
Q  285 tatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacac 361  Q
    ||||||||||  |||||||||||| ||| |||||| ||||||| || |||| ||||||||| |||||||||||||||    
T  43921667 tatgaagcacggacacctctaggactagccgtgtcacggtgtccgacacgcttcggtgtccgacactcctatgacac 43921743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 27044432 - 27044351
Alignment:
Q  280 taacatatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacac 361  Q
    |||||||||||||||| ||||||||   | ||||||||| || ||||| || |||| ||||||| | ||| |||||||||||    
T  27044432 taacatatgaagcacagacacctcttaaactagacgtgttgcagtgtcagacacgcgtcggtgttcgacagtcctatgacac 27044351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 420
Target Start/End: Original strand, 18393289 - 18393434
Alignment:
Q  279 ataacatatgaagcacatacacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacaccgcgtacaacacgagtc 378  Q
    ||||| ||||||||||| |||||||||||||||| ||| |||  |||||||| | |  | ||||| | |||||||||||||| | ||||| ||||| |||    
T  18393289 ataacctatgaagcacaaacacctctaggattaggcgtttcggagtgtctgacatgtgtaggtgttcgacactcctatgaca-ctcgtacgacacgtgtc 18393387  T
Q  379 gaaccggtgtcc-aaataa--tgtttt--tctttacttcgactctcc 420  Q
    ||||  |||||| ||||||  ||||||  ||||||||||||| ||||    
T  18393388 gaactagtgtcctaaataatttgttttcatctttacttcgacactcc 18393434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 361
Target Start/End: Complemental strand, 27402710 - 27402646
Alignment:
Q  297 acacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacac 361  Q
    |||||||||||||||| ||||| | ||||||||| |||  ||||||||| |||||||| ||||||    
T  27402710 acacctctaggattaggcgtgttgtggtgtctgacacgtgtcggtgtccgacactcctttgacac 27402646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 361
Target Start/End: Original strand, 30882702 - 30882766
Alignment:
Q  297 acacctctaggattagacgtgtcgcggtgtctgatacgcatcggtgtccaacactcctatgacac 361  Q
    ||||||||| |||||| |||||||||||||| || || ||||||||||  |||||| || |||||    
T  30882702 acacctctaagattaggcgtgtcgcggtgtcggacacacatcggtgtctgacactcgtacgacac 30882766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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