View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17343_low_27 (Length: 313)
Name: NF17343_low_27
Description: NF17343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17343_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 29 - 295
Target Start/End: Complemental strand, 36026308 - 36026042
Alignment:
| Q |
29 |
tatctccatactacattaccagaagcatttgtggaaaaatatcatattctggaacgtcctcttannnnnnnnnnnnngatagtactagaacgtcctctta |
128 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
36026308 |
tatctccatactacattaccagaagcatttgtggaaaaatatcatattctggaacgtcctcttatttttatttttttgatagtactagaacgtcctctta |
36026209 |
T |
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| Q |
129 |
ttaaatatcaactgacagtaaaaccatagttgaatgaagagaattaataaaagaataagagaaccggggaaaaatattgtgtcggatttcgtaaagcaag |
228 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36026208 |
ttaaatatcaactgacagtaagaccatagttgaatgaagagaattaataaaagaataagagaaccggggaaaaatattgtgtcggatttcgtaaagcaag |
36026109 |
T |
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| Q |
229 |
aacccacaagagatccaactcaatctattcgataataatttcttctgaatcggaatactacaaatac |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36026108 |
aacccacaagagatccaactcaatctattcgataataatttcttctgaatcggaatactacaaatac |
36026042 |
T |
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