View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17345_low_10 (Length: 280)
Name: NF17345_low_10
Description: NF17345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17345_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 15 - 265
Target Start/End: Complemental strand, 39959402 - 39959152
Alignment:
| Q |
15 |
aatattcagaaagctttaaaagtattcacaattgtttttagccctttatagatcgatttgatatttataaccatttattaattcttatttgcattaattt |
114 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39959402 |
aatattcagaaagctttaaaagtattcacaattgcttttagccctttatagatcgatttgatatttataaccatttattaattcttatttgcattaattt |
39959303 |
T |
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| Q |
115 |
caaacaggaatatatgacatgaaaacaaggaaaggactggctctgattgatattgttagagaagtgacaatgtgagtcttatatatcatactaacgtcca |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39959302 |
caaacaggaatatatgacatgaaaacaaggaaaggactggctctgattgatattgttagagaagtgacaatgtgagtcttatatatcatactaacgtcca |
39959203 |
T |
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| Q |
215 |
acttcctggtaatttatttcatttatcttatttacattttgttgttgtcac |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39959202 |
acttcctggtaatttatttcatttatcttatttacattttgttgttgtcac |
39959152 |
T |
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