View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17348_low_15 (Length: 250)
Name: NF17348_low_15
Description: NF17348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17348_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 1327334 - 1327097
Alignment:
| Q |
1 |
aatgctgagcacacacgcctaatgtttccaacagaacctgtctttactccaatttgtcccatttttaccatggactgaacaaaatcattttcaaaagaag |
100 |
Q |
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| T |
1327334 |
aatgctgagcacacacgcctaatgtttccaacagaacctgtctttactccaatttgtcccatttttaccatggactgaacaaaatcattttcaaaagaag |
1327235 |
T |
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| Q |
101 |
gtccaaatgttggatttataggattaaagtaggaatcaatgacactctttgttacaaagtcatcattaagtcttgcatcagaagctaacacagcaaaacc |
200 |
Q |
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| T |
1327234 |
gtccaaatgttggatttataggattgaagtaggaatcaatgacactctttgttacaaagtcatcattaagtcttgcatcagaagctaacacagcaaaacc |
1327135 |
T |
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| Q |
201 |
ttcccttatgtttttcaatatactcttgtcaaatttca |
238 |
Q |
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| T |
1327134 |
ttcccttatgtttttcaatatactcttgtcaaatttca |
1327097 |
T |
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