View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17348_low_16 (Length: 238)
Name: NF17348_low_16
Description: NF17348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17348_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 8 - 221
Target Start/End: Complemental strand, 34637510 - 34637297
Alignment:
| Q |
8 |
taactcatacccttcctcaaccatgtttcctagttcctcacttcctcctaaactcaaacaattataattactaatggaaccaaacacactctccaaaata |
107 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34637510 |
taactcatacccttccttaaccatgtttcctagttcctcacttcctcctaaactcaaacaattataattactaatggaaccaaacacactctccaaaata |
34637411 |
T |
|
| Q |
108 |
ttgctaagagatccttcttgcaatattcctctaacttccaccacccctttctcctccatatccttaaaaactttcaacatcatttcatccgccacgcatt |
207 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
34637410 |
ttgctaagagatccttcttgcaatatccctctaacttccaccacccctttctcctccatatccttaaaaactttcaacatcatttcatccgccacgcgtt |
34637311 |
T |
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| Q |
208 |
gccggagactctcc |
221 |
Q |
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|||||||||||||| |
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| T |
34637310 |
gccggagactctcc |
34637297 |
T |
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