View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17348_low_17 (Length: 236)
Name: NF17348_low_17
Description: NF17348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17348_low_17 |
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Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 6010054 - 6010273
Alignment:
| Q |
1 |
ctgacaatcagactttaacaaagcgaaatcctctcctttcttactttgtccagcttgaccatgaacaatctcaggcttctcaattttctcgctcatcaac |
100 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6010054 |
ctgacaatcagactttaacaacgcgaaatcctctcctttcttactctgtccagcttgaccatgaacaatctcaggcttctcaattttctcgctcatcaac |
6010153 |
T |
|
| Q |
101 |
tcccgcttcaatagaaccgaaagaggaaccgtatgatggtgttcactcctcacagacattgttctttcccctcctaatatatcctcaaattctcaatacc |
200 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
6010154 |
tcccgcttcaatagaaccgaaagaggaacggtatgatggtgttcactcctcacagacattgttctttcccctcgtaatatatcctcaaattctcaatacc |
6010253 |
T |
|
| Q |
201 |
aacaattagactcaactttt |
220 |
Q |
| |
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|||||||||||||||||||| |
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| T |
6010254 |
aacaattagactcaactttt |
6010273 |
T |
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