View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17349_high_4 (Length: 294)
Name: NF17349_high_4
Description: NF17349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17349_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 31085033 - 31085127
Alignment:
| Q |
14 |
aaaggcaatcaaccacaatagaatgcatcaaataataggctacag-----cgctccccaaaatagaaaaaaccaaatacatcttctcttacggtc |
103 |
Q |
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| T |
31085033 |
aaaggcaatcaaccacaatagaatgcatcaaataataggctacagtacagcgctcaccaaaatagaaaaaaccaaatacatcttctcttacggtc |
31085127 |
T |
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