View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1734_high_58 (Length: 250)
Name: NF1734_high_58
Description: NF1734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1734_high_58 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 32638728 - 32638932
Alignment:
| Q |
12 |
atgaacatagacaattagtcccaagtgaagaaaaaatacaagaaaattacatcaatcaaacaccaccttcctccacaaaaaataggagaaaataaatctc |
111 |
Q |
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| T |
32638728 |
atgaacatagacaattagtcccaagtgaagaaaaaatacaagaaaattacatcaatcaaacaccaccttcctccacaaaaaataggagaaaataaatctc |
32638827 |
T |
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| Q |
112 |
taatagtttccatttccatacatatatatcccaatacaaacccactatattttgtccccccttattccacccccaaaaaagaaaatcattgagaataatt |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32638828 |
taatagtttccatttccatacatatatatcccaatacaaacccactatattttgtccccccttattccacccccaaaaaagaaaatcattgagaataatt |
32638927 |
T |
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| Q |
212 |
ttgtt |
216 |
Q |
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||||| |
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| T |
32638928 |
ttgtt |
32638932 |
T |
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