View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1734_low_10 (Length: 474)
Name: NF1734_low_10
Description: NF1734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1734_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 438; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 1 - 458
Target Start/End: Original strand, 31523886 - 31524343
Alignment:
| Q |
1 |
tggatttgtacaagccaacacacattgtcttgctttcaagcccaggtctaggccatctcatgcctatcatcgagctagctaaacgcttccaaatccacca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31523886 |
tggatttgtacaagccaacacacattgtcttgctttcaagcccaggtctaggccatctcatgcctatcatcgagctagctaaacgcttccaaatccacca |
31523985 |
T |
|
| Q |
101 |
caatttcaaactcacaatcctcgccatcacttctcaaacctcacacactgaatctcatattctcaaatcagccaccaacccctcactctacaacatcatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31523986 |
caatttcaaactcacaatcctcgccatcacttctcaaacctcacacactgaatctcatattctcaaatcagccaccaacccctcactctacaacatcatc |
31524085 |
T |
|
| Q |
201 |
caaatcccatcaccaaacatttcctccctcctccccgtctccgccaccgtctgcacccgcatctttctaacaatgcgccactccatacctttcatcaaat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |
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| T |
31524086 |
caaatcccatcaccaaacatttcctccctcctccccgtctccgccaccgtctgcacccgcatctttctaacaatgcgccattccataccttccatcaaat |
31524185 |
T |
|
| Q |
301 |
ccgcactcacaaacttaaccctccctccttctgctctcatcgtcgacatattcggaacagaagccctacctttagccctagaactcaacattccgaaatt |
400 |
Q |
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| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
31524186 |
ctgcactcacaaacttaaccctccctccttctgctctcatcgtcgacatattcggaacagaagccctacctttagccctagaactcaacattccgagatt |
31524285 |
T |
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| Q |
401 |
cgtttacgtagcttcacatgcttggtttctttccctgtacgtgtattctcctgttttg |
458 |
Q |
| |
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| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31524286 |
catttacgtagcttcacatgcttggtttctttccctgtacgtgtattctcctgttttg |
31524343 |
T |
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