View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1734_low_54 (Length: 258)
Name: NF1734_low_54
Description: NF1734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1734_low_54 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 9068672 - 9068913
Alignment:
| Q |
1 |
agacactattcaagaaaattagtctgtcgaaaattggatagacgcaccaatatcttcctagtagctcgagtagtattttgtgagaagaaaatactagtat |
100 |
Q |
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| T |
9068672 |
agacactattcaagaaaattagtttgtcgaaaattggatagacgcaccaatatcttcctagtagctcgagtagtattttgtgagaagaaaataccagtat |
9068771 |
T |
|
| Q |
101 |
tttcttgacaaaattgccttagaggttttgcgacacaattcatttgcatttatctatcctctcgaaacaagtatatagctcatcagcaaacatcaagtga |
200 |
Q |
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| T |
9068772 |
tttcttgacataattgccttagaggttttgtgacacaattcatttgcatttatctatcctctcgaaacaagtatagagctcatcagaaaacatcaagtga |
9068871 |
T |
|
| Q |
201 |
gacaccattggcccaaaacaaaacactctaacaggggattac |
242 |
Q |
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||||||| ||||||||||||||||||||||||||||| |||| |
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| T |
9068872 |
gacaccaatggcccaaaacaaaacactctaacaggggcttac |
9068913 |
T |
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