View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1734_low_8 (Length: 508)

Name: NF1734_low_8
Description: NF1734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1734_low_8
NF1734_low_8
[»] chr6 (67 HSPs)
chr6 (19-204)||(31283992-31284180)
chr6 (327-437)||(1158273-1158383)
chr6 (344-444)||(27909001-27909102)
chr6 (31-114)||(27678743-27678826)
chr6 (19-122)||(26655778-26655881)
chr6 (19-122)||(26761749-26761852)
chr6 (19-114)||(27338360-27338455)
chr6 (19-114)||(27399100-27399195)
chr6 (31-114)||(27706709-27706792)
chr6 (25-122)||(27611303-27611400)
chr6 (25-122)||(28786067-28786164)
chr6 (25-122)||(28792188-28792285)
chr6 (316-451)||(9246043-9246176)
chr6 (25-122)||(27725146-27725243)
chr6 (323-444)||(5483867-5483988)
chr6 (149-222)||(27531661-27531734)
chr6 (25-122)||(28780928-28781025)
chr6 (316-468)||(17265718-17265870)
chr6 (332-423)||(7649814-7649905)
chr6 (350-445)||(12450384-12450479)
chr6 (48-122)||(26823635-26823709)
chr6 (25-122)||(27229023-27229118)
chr6 (25-122)||(27698795-27698891)
chr6 (25-122)||(27718680-27718777)
chr6 (347-445)||(30627853-30627951)
chr6 (385-474)||(9077654-9077743)
chr6 (352-441)||(10283318-10283407)
chr6 (45-122)||(27605032-27605109)
chr6 (332-444)||(1158260-1158372)
chr6 (347-451)||(2972194-2972298)
chr6 (325-445)||(28630761-28630881)
chr6 (157-251)||(26655585-26655680)
chr6 (157-251)||(26761556-26761651)
chr6 (313-435)||(27909004-27909127)
chr6 (19-73)||(26861454-26861508)
chr6 (332-441)||(5483885-5483994)
chr6 (332-441)||(7257354-7257463)
chr6 (387-467)||(3064953-3065033)
chr6 (19-75)||(26622812-26622868)
chr6 (19-75)||(26728790-26728846)
chr6 (151-199)||(26802113-26802161)
chr6 (322-445)||(28630773-28630896)
chr6 (149-188)||(28785980-28786019)
chr6 (390-469)||(30895257-30895336)
chr6 (316-426)||(2230388-2230498)
chr6 (52-122)||(26055748-26055818)
chr6 (31-77)||(27593327-27593373)
chr6 (31-77)||(27677921-27677967)
chr6 (332-445)||(12450371-12450484)
chr6 (53-122)||(26048667-26048736)
chr6 (53-122)||(26069836-26069905)
chr6 (53-122)||(26075718-26075787)
chr6 (53-122)||(26142687-26142756)
chr6 (352-424)||(7649840-7649912)
chr6 (375-427)||(20703458-20703510)
chr6 (149-189)||(27338546-27338586)
chr6 (149-189)||(27399286-27399326)
chr6 (149-204)||(27725321-27725377)
chr6 (389-445)||(33119924-33119980)
chr6 (25-122)||(27427904-27427999)
chr6 (149-199)||(27586227-27586277)
chr6 (339-380)||(25538004-25538045)
chr6 (53-122)||(25538362-25538431)
chr6 (400-473)||(30438735-30438808)
chr6 (393-445)||(1836980-1837032)
chr6 (385-445)||(8052924-8052984)
chr6 (393-445)||(8646699-8646751)
[»] chr4 (50 HSPs)
chr4 (149-259)||(18699880-18699990)
chr4 (149-259)||(18680041-18680155)
chr4 (316-466)||(48361051-48361201)
chr4 (162-235)||(18655923-18655996)
chr4 (25-122)||(18699688-18699785)
chr4 (327-469)||(30191906-30192048)
chr4 (332-445)||(16412249-16412362)
chr4 (347-445)||(4386166-4386264)
chr4 (347-441)||(25477569-25477663)
chr4 (347-473)||(8347675-8347801)
chr4 (319-441)||(45828439-45828561)
chr4 (318-468)||(47943728-47943878)
chr4 (316-470)||(48195889-48196043)
chr4 (25-122)||(18655765-18655862)
chr4 (25-122)||(18731792-18731889)
chr4 (316-437)||(53225672-53225793)
chr4 (315-467)||(44111743-44111895)
chr4 (347-441)||(21554133-21554226)
chr4 (25-122)||(18679855-18679952)
chr4 (322-427)||(43117892-43117997)
chr4 (365-445)||(9044407-9044487)
chr4 (194-234)||(18732020-18732060)
chr4 (332-468)||(36132632-36132768)
chr4 (316-471)||(48361046-48361201)
chr4 (325-407)||(41116570-41116652)
chr4 (149-193)||(18724537-18724581)
chr4 (332-424)||(26066384-26066476)
chr4 (323-422)||(2643614-2643713)
chr4 (25-84)||(18724373-18724432)
chr4 (332-454)||(3162910-3163032)
chr4 (397-467)||(53225724-53225794)
chr4 (332-445)||(1204537-1204649)
chr4 (335-440)||(17284760-17284865)
chr4 (352-445)||(44061408-44061501)
chr4 (316-445)||(50121436-50121565)
chr4 (327-467)||(25477555-25477695)
chr4 (384-432)||(34226420-34226467)
chr4 (365-445)||(35429793-35429873)
chr4 (385-445)||(53658384-53658444)
chr4 (402-473)||(24100751-24100822)
chr4 (338-445)||(32714289-32714395)
chr4 (326-437)||(42169071-42169182)
chr4 (25-122)||(17989338-17989433)
chr4 (25-122)||(18073556-18073651)
chr4 (350-424)||(25700486-25700560)
chr4 (392-466)||(45096649-45096723)
chr4 (392-445)||(45828490-45828543)
chr4 (393-445)||(20459261-20459313)
chr4 (393-445)||(43020831-43020883)
chr4 (393-445)||(47866111-47866163)
[»] chr3 (39 HSPs)
chr3 (317-444)||(19649600-19649727)
chr3 (316-469)||(28406463-28406616)
chr3 (350-474)||(8266266-8266388)
chr3 (316-466)||(21662885-21663035)
chr3 (313-469)||(53441903-53442059)
chr3 (316-445)||(12747717-12747846)
chr3 (350-441)||(52864984-52865075)
chr3 (347-445)||(44518066-44518164)
chr3 (316-445)||(54537442-54537571)
chr3 (348-424)||(48593173-48593249)
chr3 (390-464)||(36985229-36985303)
chr3 (390-464)||(37010668-37010742)
chr3 (313-467)||(51516954-51517107)
chr3 (316-442)||(51723377-51723503)
chr3 (316-473)||(54537435-54537592)
chr3 (350-442)||(9236120-9236212)
chr3 (345-445)||(12064929-12065029)
chr3 (316-444)||(28406466-28406594)
chr3 (350-422)||(32711245-32711317)
chr3 (390-445)||(9197101-9197156)
chr3 (352-454)||(23222969-23223071)
chr3 (347-445)||(25910211-25910309)
chr3 (316-469)||(21662882-21663035)
chr3 (345-418)||(34750942-34751015)
chr3 (332-444)||(19649594-19649706)
chr3 (347-467)||(43448988-43449108)
chr3 (338-445)||(25954042-25954149)
chr3 (316-423)||(29290777-29290884)
chr3 (322-441)||(33808334-33808452)
chr3 (385-460)||(35099060-35099135)
chr3 (392-422)||(31836482-31836512)
chr3 (350-424)||(32711235-32711309)
chr3 (378-419)||(653283-653324)
chr3 (332-441)||(8987744-8987853)
chr3 (393-445)||(29457860-29457912)
chr3 (375-423)||(33068246-33068294)
chr3 (393-445)||(33371936-33371988)
chr3 (316-420)||(44593200-44593304)
chr3 (400-444)||(48643687-48643731)
[»] chr7 (42 HSPs)
chr7 (313-469)||(36245372-36245528)
chr7 (316-445)||(39153307-39153434)
chr7 (316-468)||(28677314-28677466)
chr7 (321-445)||(8566101-8566225)
chr7 (316-467)||(11668013-11668164)
chr7 (345-466)||(45533258-45533379)
chr7 (347-442)||(30869209-30869304)
chr7 (316-454)||(2523781-2523919)
chr7 (325-423)||(2610195-2610293)
chr7 (359-469)||(6838417-6838527)
chr7 (313-445)||(16861508-16861638)
chr7 (321-445)||(29365625-29365749)
chr7 (345-445)||(29365641-29365741)
chr7 (352-472)||(41850631-41850751)
chr7 (338-455)||(2399962-2400079)
chr7 (333-442)||(45441459-45441568)
chr7 (352-472)||(48838347-48838467)
chr7 (347-454)||(30823739-30823846)
chr7 (393-468)||(32811375-32811450)
chr7 (391-437)||(40142801-40142847)
chr7 (316-445)||(32811730-32811858)
chr7 (350-419)||(40362003-40362072)
chr7 (385-445)||(2680878-2680938)
chr7 (347-423)||(34117981-34118057)
chr7 (316-380)||(41863666-41863730)
chr7 (347-445)||(7456439-7456537)
chr7 (348-423)||(10462408-10462483)
chr7 (400-467)||(23870977-23871044)
chr7 (369-423)||(1709867-1709921)
chr7 (393-471)||(4826837-4826915)
chr7 (347-469)||(9979797-9979918)
chr7 (339-445)||(28020021-28020126)
chr7 (316-466)||(36245375-36245525)
chr7 (316-441)||(47942861-47942986)
chr7 (316-441)||(47948291-47948416)
chr7 (393-445)||(1366615-1366667)
chr7 (316-469)||(10007570-10007725)
chr7 (393-445)||(27231854-27231906)
chr7 (400-444)||(29559520-29559564)
chr7 (393-445)||(31227568-31227620)
chr7 (400-444)||(41088873-41088917)
chr7 (316-424)||(41850637-41850745)
[»] chr2 (64 HSPs)
chr2 (316-444)||(9152400-9152528)
chr2 (316-445)||(41153131-41153260)
chr2 (315-467)||(43713972-43714123)
chr2 (347-445)||(12962735-12962833)
chr2 (332-445)||(11030212-11030325)
chr2 (316-454)||(7943450-7943589)
chr2 (315-445)||(30758740-30758869)
chr2 (347-445)||(32457233-32457331)
chr2 (315-463)||(35728466-35728615)
chr2 (332-444)||(12486007-12486119)
chr2 (325-445)||(38554478-38554598)
chr2 (350-445)||(10204959-10205054)
chr2 (327-466)||(38982998-38983137)
chr2 (347-445)||(28248953-28249051)
chr2 (345-445)||(22333545-22333645)
chr2 (332-444)||(29988907-29989019)
chr2 (316-455)||(5109362-5109501)
chr2 (387-445)||(3837430-3837488)
chr2 (347-441)||(12873753-12873847)
chr2 (391-445)||(32487064-32487118)
chr2 (347-445)||(33824380-33824478)
chr2 (368-441)||(5281202-5281275)
chr2 (316-444)||(12486013-12486141)
chr2 (316-468)||(33273967-33274119)
chr2 (347-467)||(41153141-41153261)
chr2 (369-424)||(3037777-3037832)
chr2 (316-467)||(9152378-9152529)
chr2 (338-437)||(11182193-11182292)
chr2 (347-454)||(39118044-39118151)
chr2 (373-444)||(43893945-43894016)
chr2 (316-466)||(30761377-30761527)
chr2 (332-467)||(12873721-12873856)
chr2 (347-445)||(29169855-29169953)
chr2 (392-423)||(32516205-32516236)
chr2 (316-454)||(12962716-12962854)
chr2 (369-415)||(14803085-14803131)
chr2 (335-417)||(22857822-22857904)
chr2 (315-437)||(34447531-34447653)
chr2 (390-444)||(36881600-36881654)
chr2 (338-444)||(37670339-37670445)
chr2 (312-445)||(45571025-45571157)
chr2 (312-445)||(45574692-45574824)
chr2 (312-445)||(45578359-45578491)
chr2 (312-445)||(45582026-45582158)
chr2 (312-445)||(45585693-45585825)
chr2 (312-445)||(45589360-45589492)
chr2 (312-445)||(45593027-45593159)
chr2 (312-445)||(45596694-45596826)
chr2 (312-445)||(45600361-45600493)
chr2 (312-445)||(45604028-45604160)
chr2 (312-445)||(45607695-45607827)
chr2 (312-445)||(45611362-45611494)
chr2 (312-445)||(45615029-45615161)
chr2 (393-445)||(3838438-3838490)
chr2 (393-445)||(4044595-4044647)
chr2 (352-424)||(7833317-7833389)
chr2 (352-416)||(14803082-14803146)
chr2 (393-445)||(15384502-15384554)
chr2 (325-473)||(20555266-20555413)
chr2 (400-444)||(25795321-25795365)
chr2 (397-445)||(28249013-28249061)
chr2 (385-445)||(28494772-28494832)
chr2 (332-380)||(42698149-42698197)
chr2 (393-445)||(45034473-45034525)
[»] chr8 (37 HSPs)
chr8 (316-470)||(7693028-7693182)
chr8 (353-473)||(8793755-8793875)
chr8 (345-466)||(3236358-3236479)
chr8 (338-468)||(42122963-42123093)
chr8 (316-445)||(5031463-5031592)
chr8 (332-440)||(10184576-10184684)
chr8 (332-427)||(6354685-6354780)
chr8 (316-445)||(35149688-35149817)
chr8 (359-423)||(28872158-28872222)
chr8 (332-432)||(34711096-34711196)
chr8 (350-445)||(16448809-16448904)
chr8 (327-445)||(10839773-10839890)
chr8 (25-79)||(29274071-29274125)
chr8 (347-445)||(40483303-40483401)
chr8 (316-475)||(3236322-3236479)
chr8 (325-437)||(15720207-15720319)
chr8 (353-445)||(24618978-24619070)
chr8 (345-414)||(30924731-30924800)
chr8 (316-436)||(1223122-1223242)
chr8 (316-424)||(8793760-8793868)
chr8 (385-469)||(8803296-8803380)
chr8 (316-423)||(13831403-13831510)
chr8 (385-424)||(289154-289193)
chr8 (352-423)||(27883141-27883212)
chr8 (352-423)||(28023321-28023392)
chr8 (350-445)||(32597518-32597613)
chr8 (347-445)||(16008543-16008641)
chr8 (391-424)||(9503612-9503645)
chr8 (397-445)||(7693113-7693161)
chr8 (392-424)||(9503481-9503513)
chr8 (397-445)||(10839783-10839831)
chr8 (393-445)||(12958851-12958903)
chr8 (393-445)||(22429610-22429662)
chr8 (394-422)||(30112380-30112408)
chr8 (391-423)||(30114812-30114844)
chr8 (393-445)||(35011287-35011339)
chr8 (393-445)||(44796417-44796469)
[»] chr1 (35 HSPs)
chr1 (316-469)||(26924212-26924365)
chr1 (347-468)||(26070854-26070975)
chr1 (316-445)||(26760193-26760322)
chr1 (347-445)||(34332506-34332604)
chr1 (345-445)||(44939086-44939186)
chr1 (311-423)||(50155340-50155452)
chr1 (339-437)||(38590094-38590192)
chr1 (347-468)||(15342967-15343088)
chr1 (316-445)||(38040296-38040425)
chr1 (350-466)||(519832-519948)
chr1 (325-445)||(38737951-38738071)
chr1 (332-423)||(640537-640627)
chr1 (325-444)||(49944841-49944960)
chr1 (359-445)||(8971270-8971356)
chr1 (316-445)||(38040275-38040404)
chr1 (388-473)||(39748611-39748696)
chr1 (316-427)||(29256637-29256747)
chr1 (338-445)||(37178931-37179038)
chr1 (27-77)||(268647-268697)
chr1 (352-445)||(11386190-11386282)
chr1 (316-469)||(26924209-26924362)
chr1 (19-108)||(28164644-28164733)
chr1 (392-445)||(47912837-47912890)
chr1 (352-445)||(50155333-50155426)
chr1 (373-445)||(34146860-34146932)
chr1 (390-445)||(6661587-6661642)
chr1 (352-423)||(47419949-47420020)
chr1 (393-467)||(34662757-34662831)
chr1 (353-415)||(36141720-36141782)
chr1 (394-423)||(28358999-28359028)
chr1 (327-424)||(49184249-49184346)
chr1 (350-418)||(10015144-10015212)
chr1 (347-423)||(15286039-15286115)
chr1 (324-380)||(27422992-27423048)
chr1 (325-445)||(49944853-49944973)
[»] scaffold1254 (2 HSPs)
scaffold1254 (25-114)||(218-307)
scaffold1254 (149-188)||(398-437)
[»] scaffold0419 (2 HSPs)
scaffold0419 (25-114)||(7322-7411)
scaffold0419 (149-188)||(7192-7231)
[»] scaffold0277 (2 HSPs)
scaffold0277 (25-122)||(4972-5069)
scaffold0277 (25-122)||(13933-14030)
[»] chr5 (32 HSPs)
chr5 (347-468)||(22101938-22102059)
chr5 (316-445)||(29299356-29299486)
chr5 (314-467)||(38394425-38394578)
chr5 (368-468)||(21488280-21488380)
chr5 (347-445)||(18473505-18473603)
chr5 (353-442)||(919665-919754)
chr5 (347-467)||(33478137-33478257)
chr5 (345-454)||(34297185-34297294)
chr5 (347-427)||(14913144-14913224)
chr5 (350-445)||(5002160-5002255)
chr5 (338-409)||(14723407-14723478)
chr5 (316-470)||(13789727-13789881)
chr5 (347-445)||(36286079-36286177)
chr5 (316-466)||(38394427-38394577)
chr5 (316-444)||(11931968-11932097)
chr5 (327-380)||(35349498-35349551)
chr5 (332-427)||(32902806-32902901)
chr5 (397-467)||(3814051-3814121)
chr5 (345-442)||(32452252-32452348)
chr5 (393-445)||(1138238-1138290)
chr5 (390-437)||(18391526-18391573)
chr5 (314-437)||(18473503-18473626)
chr5 (393-467)||(29031035-29031109)
chr5 (316-445)||(13789731-13789860)
chr5 (340-445)||(26327559-26327663)
chr5 (392-424)||(892588-892620)
chr5 (393-445)||(1015176-1015228)
chr5 (373-445)||(8235433-8235505)
chr5 (393-445)||(15968386-15968438)
chr5 (396-424)||(22398120-22398148)
chr5 (393-445)||(22731279-22731331)
chr5 (316-467)||(29299355-29299507)
[»] scaffold0349 (4 HSPs)
scaffold0349 (25-122)||(3723-3820)
scaffold0349 (25-122)||(8102-8199)
scaffold0349 (25-122)||(14656-14752)
scaffold0349 (149-204)||(3898-3954)
[»] scaffold0236 (1 HSPs)
scaffold0236 (316-437)||(16679-16797)
[»] scaffold0136 (1 HSPs)
scaffold0136 (350-454)||(16562-16666)
[»] scaffold0123 (1 HSPs)
scaffold0123 (316-454)||(28098-28238)
[»] scaffold0027 (1 HSPs)
scaffold0027 (402-445)||(5499-5542)
[»] scaffold0003 (1 HSPs)
scaffold0003 (25-122)||(59364-59459)
[»] scaffold0002 (2 HSPs)
scaffold0002 (338-388)||(423325-423375)
scaffold0002 (390-435)||(423321-423366)
[»] scaffold0110 (2 HSPs)
scaffold0110 (316-437)||(1561-1681)
scaffold0110 (401-473)||(1616-1688)
[»] scaffold0028 (1 HSPs)
scaffold0028 (338-427)||(71887-71976)
[»] scaffold0025 (1 HSPs)
scaffold0025 (339-424)||(65991-66076)
[»] scaffold0032 (1 HSPs)
scaffold0032 (387-419)||(47300-47332)


Alignment Details
Target: chr6 (Bit Score: 147; Significance: 3e-77; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 31284180 - 31283992
Alignment:
Q  19 ggtatttgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacaga 118  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  31284180 ggtatttgaatacataggaaattgaagaggaagaggaagatgattgcatagccatgagatttgagagaatatggatgaagaaagaatttgagaatgcaga 31284081  T
Q  119 a---tattaaatatcacataccaatgctacgtcaaacttcctggccacttgctatagccgtgtggaccaatcacacattaaataacatt 204  Q
    |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  31284080 atagtattaaatatcacataccaatgctacgtcaaacttcctggccacttgctatagccgtgtggaccaatcacacagtaaatatcatt 31283992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 327 - 437
Target Start/End: Complemental strand, 1158383 - 1158273
Alignment:
Q  327 gtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaa 426  Q
    |||| |||||||| |||||||||||||||||||| || ||| ||||||||||||| | |||| |||||||||| |||||||||||||||||||||||| |    
T  1158383 gtcctatttacaagaaataattgactttttaaatacattgaataattgatgtatttggtctagaatatagaccgaatacattaattattcaatgaatcta 1158284  T
Q  427 ataagtcaaat 437  Q
    | |||| ||||    
T  1158283 aaaagttaaat 1158273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 444
Target Start/End: Original strand, 27909001 - 27909102
Alignment:
Q  344 taattgactttttaaattcaat-gagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttc 442  Q
    |||||||||||||| ||||||| ||||||||||||||| || ||||||||||||| ||||||||| ||||||||||||||| ||| ||||||||| ||||    
T  27909001 taattgactttttagattcaattgagtaattgatgtatccggtctaaaatatagatcaaatacatcaattattcaatgaattaaaaaagtcaaatgtttc 27909100  T
Q  443 tt 444  Q
    ||    
T  27909101 tt 27909102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 27678826 - 27678743
Alignment:
Q  31 cataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaata 114  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||||||| ||||||  |||||||| ||||||||||||||||    
T  27678826 cataggaaattgaagtggaagaggaaggtgattgcatagccatgagattttagagaaattagatgaaaaaagagtttgagaata 27678743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 26655881 - 26655778
Alignment:
Q  19 ggtatttgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacaga 118  Q
    ||||||| || |||||||||| | ||||||| ||||||| |||||| |||||||||||| ||||||||| || |||||| |||||||||| |||| ||||    
T  26655881 ggtatttaaacccataggaaaatgaagaggatgaggaaggtgattgtatagccatgagaattgagagaaaatggatgaaaaaagagtttgggaatgcaga 26655782  T
Q  119 atat 122  Q
    ||||    
T  26655781 atat 26655778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 122
Target Start/End: Complemental strand, 26761852 - 26761749
Alignment:
Q  19 ggtatttgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacaga 118  Q
    ||||||| || |||||||||| | ||||||| ||||||| |||||| |||||||||||| ||||||||| || |||||| |||||||||| |||| ||||    
T  26761852 ggtatttaaacccataggaaaatgaagaggatgaggaaggtgattgtatagccatgagaattgagagaaaatggatgaaaaaagagtttgggaatgcaga 26761753  T
Q  119 atat 122  Q
    ||||    
T  26761752 atat 26761749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 27338360 - 27338455
Alignment:
Q  19 ggtatttgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaata 114  Q
    |||||||||| ||| |||||||| ||||||||||||||  ||||||||||||||||||| |||||||||   ||||||| ||| ||||||||||||    
T  27338360 ggtatttgaacccagaggaaattgaagaggaagaggaaagtgattgcatagccatgagaattgagagaaataagatgaaaaaaaagtttgagaata 27338455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 27399100 - 27399195
Alignment:
Q  19 ggtatttgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaata 114  Q
    |||||||||| ||| |||||||| ||||||||||||||  ||||||||||||||||||| |||||||||   ||||||| ||| ||||||||||||    
T  27399100 ggtatttgaacccagaggaaattgaagaggaagaggaaagtgattgcatagccatgagaattgagagaaataagatgaaaaaaaagtttgagaata 27399195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 27706709 - 27706792
Alignment:
Q  31 cataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaata 114  Q
    ||||||||||| ||| ||||||| ||| |||||||||||||||||||||| ||||||  |||||||| ||||||||||||||||    
T  27706709 cataggaaattgaagtggaagagaaaggtgattgcatagccatgagattttagagaaattagatgaaaaaagagtttgagaata 27706792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 27611303 - 27611400
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||||||||||||| | |||| |||||||||| | ||||||||||||||| | |||||||||  | |||||| ||||||||||||||| ||||||||    
T  27611303 tgaatccataggaaaatgaagaagaagaggaagctaattgcatagccatgaaaattgagagaaattggatgaaaaaagagtttgagaatgcagaatat 27611400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 28786164 - 28786067
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||||||||||||| | ||||||| ||||||| |||||| |||||||| ||| |||||||||  | |||||| ||||||||||||||| ||||||||    
T  28786164 tgaatccataggaaaatgaagaggatgaggaaggtgattgtatagccataagaattgagagaaattggatgaaaaaagagtttgagaattcagaatat 28786067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 28792285 - 28792188
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||||||||||||| | ||||||| ||||||| |||||| |||||||| ||| |||||||||  | |||||| ||||||||||||||| ||||||||    
T  28792285 tgaatccataggaaaatgaagaggatgaggaaggtgattgtatagccataagaattgagagaaattggatgaaaaaagagtttgagaattcagaatat 28792188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 316 - 451
Target Start/End: Original strand, 9246043 - 9246176
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| |||| ||||| |  ||||||||||||  |||| ||| ||||| |||||||||||||||||||||||||| ||| || |||||||    
T  9246043 tactccctccggtcctatttccaaaaca--attgactttttaggttcattgaataatttatgtattcgatctaaaatatagaccacataaatcaattatt 9246140  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaaca 451  Q
     ||| || | || ||||||| |||||||| ||||||    
T  9246141 taattaacctaaaaagtcaattatttcttggaaaca 9246176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 27725146 - 27725243
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatata-gatgaagaaagagtttgagaatacagaatat 122  Q
    ||||||||||||||| | ||||||| ||||||| |||||| |||||||||| | ||||||||| ||| |||||| ||||||||||||||| ||||||||    
T  27725146 tgaatccataggaaaatgaagaggatgaggaaggtgattgtatagccatgacaattgagagaa-ataggatgaaaaaagagtttgagaatgcagaatat 27725243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 5483867 - 5483988
Alignment:
Q  323 ttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaa 422  Q
    |||||||| |||||||| ||||| ||||||||||||||| | | | |||||||||||||   |||| | | ||||| ||||||||||||||||||| |||    
T  5483867 ttcggtcctatttacaataaatatttgactttttaaatttattaaataattgatgtattttgtctatattttagactaaatacattaattattcaacgaa 5483966  T
Q  423 tcaaataagtcaaatatttctt 444  Q
    || || ||||||| | ||||||    
T  5483967 tctaaaaagtcaattgtttctt 5483988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 27531661 - 27531734
Alignment:
Q  149 aaacttcctggccacttgctatagccgtgtggaccaatcacacattaaataacattctactgccacatcttctt 222  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| |||| | || |||||||    
T  27531661 aaacttcctggcaacttcctatagccgtgtggaccaatcatacattaaataacattgtactacaacctcttctt 27531734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 28781025 - 28780928
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||| || |||||| | ||||||||||||||| | ||||||||||||||| | |||||||||  | |||||| ||||||||||||||| ||||||||    
T  28781025 tgaatgcagaggaaaatgaagaggaagaggaaggtaattgcatagccatgataattgagagaaattggatgaaaaaagagtttgagaattcagaatat 28780928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 468
Target Start/End: Complemental strand, 17265870 - 17265718
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||| ||||||||  ||||| || ||| | |||| ||||||||||||  |||||||||||||||    |||| ||||||||| |||||| | | ||||     
T  17265870 tactctcttcggtcatatttataagaaaaatttgattttttaaattcatcgagtaattgatgtatcttgtctagaatatagactaaatacgtcatttatg 17265771  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtatt 468  Q
    |||||||||||| ||||||||| ||||||| ||| | ||| ||| ||||||||    
T  17265770 caatgaatcaaaaaagtcaaatgtttcttataaataggatcggaaggagtatt 17265718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 332 - 423
Target Start/End: Original strand, 7649814 - 7649905
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaat 423  Q
    ||||| || ||||||||  ||||||| ||||| ||| ||||||||||||| | ||||||||||| |||||||| || |||||||||||||||    
T  7649814 atttataataaataattatctttttagattcattgaataattgatgtatttggtctaaaatatataccaaataaatcaattattcaatgaat 7649905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 12450384 - 12450479
Alignment:
Q  350 actttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||  ||||| ||| |||||||||||||  ||||||||||||||  |||||||| | |||| |||||||| ||| |||||||||||||||||    
T  12450384 actttttggattcattgaataattgatgtattttatctaaaatatagattaaatacatcatttatgcaatgaattaaaaaagtcaaatatttctta 12450479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 26823709 - 26823635
Alignment:
Q  48 gaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    |||||||||| ||| ||||||||||||||| |||||||||  | || ||||||||||||||||||| ||||||||    
T  26823709 gaagaggaagttgactgcatagccatgagaattgagagaaattggacgaagaaagagtttgagaatgcagaatat 26823635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 27229118 - 27229023
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    |||||||| |||||| | ||||||||||||||| |||||| |||||||||||| |||||||||  | |||||  ||||||||| ||||| ||||||||    
T  27229118 tgaatccaaaggaaaatgaagaggaagaggaaggtgattgtatagccatgagacttgagagaaattggatga--aaagagttttagaatgcagaatat 27229023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 27698795 - 27698891
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatata-gatgaagaaagagtttgagaatacagaatat 122  Q
    ||||||||||||||| | ||| ||| ||||||| |||||| |||||||||||| ||||||||| ||| |||||| ||||||||||||||| ||||||||    
T  27698795 tgaatccataggaaaatgaagtggatgaggaaggtgattgtatagccatgagaattgagagaa-ataggatgaa-aaagagtttgagaatgcagaatat 27698891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 27718680 - 27718777
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatata-gatgaagaaagagtttgagaatacagaatat 122  Q
    ||||||||| ||| | | ||||||| ||||||| |||||| |||||||||||| ||||||||| ||| |||||| ||||||||||||||| ||||||||    
T  27718680 tgaatccatgggagaatgaagaggatgaggaaggtgattgtatagccatgagaattgagagaa-ataggatgaaaaaagagtttgagaatgcagaatat 27718777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 445
Target Start/End: Original strand, 30627853 - 30627951
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||| |||||| ||| | ||||||||||||||||    ||||||||||||||||||||||| | |||| |||||||||| | ||||||||| |||||||    
T  30627853 ttgattttttatatttattgagtaattgatgtatcttgtctaaaatatagaccaaatacatcatttatgcaatgaatcagaaaagtcaaatgtttctta 30627951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 474
Target Start/End: Original strand, 9077654 - 9077743
Alignment:
Q  385 tctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtattattttt 474  Q
    |||| |||||||||||||| ||| | |||| |||||||||||| ||||||||||||||||| ||| ||||  ||||||| ||||| ||||    
T  9077654 tctagaatatagaccaaatgcatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaataagaccggagggaatattaatttt 9077743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 441
Target Start/End: Complemental strand, 10283407 - 10283318
Alignment:
Q  352 tttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatattt 441  Q
    |||||||||| | |||||||||||||||| |  ||||||||||| | ||||||||| | |||| | |||||||||| |||||||||||||    
T  10283407 tttttaaatttattgagtaattgatgtatactgtctaaaatatatatcaaatacatcatttataccatgaatcaaaaaagtcaaatattt 10283318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 27605032 - 27605109
Alignment:
Q  45 gaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||| ||||||| | ||||||||||||||||| |||||||||  | |||||| ||||||||||||||| ||||||||    
T  27605032 gaggatgaggaaggtaattgcatagccatgagaattgagagaaattggatgaaaaaagagtttgagaatgcagaatat 27605109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 444
Target Start/End: Original strand, 1158260 - 1158372
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    |||||||||| | | || |||||||| ||||| ||| ||||| ||||||||| |||| | | |||||||||||||| |||||||||||| ||  || |||    
T  1158260 atttacaaaagacatttaactttttagattcattgaataattaatgtattcggtctatattctagaccaaatacatcaattattcaatgtatttaaaaag 1158359  T
Q  432 tcaaatatttctt 444  Q
    |||| ||||||||    
T  1158360 tcaattatttctt 1158372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 451
Target Start/End: Original strand, 2972194 - 2972298
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttag 446  Q
    ||||||||||| ||| | |||||||||| |||||   ||||||||||||||| |||||||| | |||| |||||||||||| | ||| ||| |||||||     
T  2972194 ttgactttttagatttattgagtaattggtgtatcttatctaaaatatagacaaaatacatcatttatgcaatgaatcaaaaacgtctaatgtttcttat 2972293  T
Q  447 aaaca 451  Q
    |||||    
T  2972294 aaaca 2972298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 28630761 - 28630881
Alignment:
Q  325 cggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    |||||| ||||| || ||| | ||||||||||  ||||| ||||||||||||||||    |||| |||||||||||||||||| | |||| |||||||||    
T  28630761 cggtcctatttataagaaaaatttgactttttttattcattgagtaattgatgtatcttgtctataatatagaccaaatacataatttatgcaatgaatc 28630860  T
Q  425 aaataagtcaaatatttctta 445  Q
     || ||||||| | |||||||    
T  28630861 taaaaagtcaattgtttctta 28630881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 26655680 - 26655585
Alignment:
Q  157 tggccacttgctatagccgtgtggacc-aatcacacattaaataacattctactgccacatcttcttggcaatttcttcaatgtgattgctgttca 251  Q
    |||||||||| |||||||||||||||| ||||||| | |||||| |||| |||| |||| | ||||||  |||||||||||||||||  |||||||    
T  26655680 tggccacttgttatagccgtgtggacccaatcacatactaaatatcattgtacttccacctattcttgcaaatttcttcaatgtgataactgttca 26655585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 251
Target Start/End: Complemental strand, 26761651 - 26761556
Alignment:
Q  157 tggccacttgctatagccgtgtggacc-aatcacacattaaataacattctactgccacatcttcttggcaatttcttcaatgtgattgctgttca 251  Q
    |||||||||| |||||||||||||||| ||||||| | |||||| |||| |||| |||| | ||||||  |||||||||||||||||  |||||||    
T  26761651 tggccacttgttatagccgtgtggacccaatcacatactaaatatcattgtacttccacctattcttgcaaatttcttcaatgtgataactgttca 26761556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 435
Target Start/End: Complemental strand, 27909127 - 27909004
Alignment:
Q  313 aactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaatt 412  Q
    |||||||||||  ||||| |||||||| ||| | |||||||||| |||||| ||| ||||||||||||| |||||| | | ||||||  |||||| ||||    
T  27909127 aactactccctctggtcctatttacaagaaacatttgacttttttaattcattgaataattgatgtatttgatctatattttagaccggatacatcaatt 27909028  T
Q  413 attcaa-tgaatcaaataagtcaa 435  Q
    | |||| |||||| || |||||||    
T  27909027 actcaattgaatctaaaaagtcaa 27909004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 26861508 - 26861454
Alignment:
Q  19 ggtatttgaatccataggaaattaaagaggaagaggaagatgattgcatagccat 73  Q
    ||||||||||||||||||||||  ||||||||||| ||| |||||||||||||||    
T  26861508 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 26861454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 441
Target Start/End: Complemental strand, 5483994 - 5483885
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    |||| ||| ||| ||||||||||||| ||||  ||| ||||| |||||||   |||||||||||||| |||||||| ||||||| ||| |||  || |||    
T  5483994 atttgcaagaaacaattgactttttagattcgttgaataattaatgtatttagtctaaaatatagacaaaatacatcaattatttaataaatttaaaaag 5483895  T
Q  432 tcaaatattt 441  Q
    ||||||||||    
T  5483894 tcaaatattt 5483885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 441
Target Start/End: Complemental strand, 7257463 - 7257354
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    ||||| |||| | ||||||||||||||||||| ||| ||||| ||||||| ||| || ||||||  | |||||  ||| |||| |||||||| ||| |||    
T  7257463 atttataaaataaaattgactttttaaattcattgaataattaatgtatttgatatataatataagctaaataagttatttatgcaatgaataaaaaaag 7257364  T
Q  432 tcaaatattt 441  Q
    ||||||||||    
T  7257363 tcaaatattt 7257354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 467
Target Start/End: Original strand, 3064953 - 3065033
Alignment:
Q  387 taaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtat 467  Q
    ||||||||||||||||||||  | |||| |||||||||||| |||| |||||||||||| ||| | ||  |||||||||||    
T  3064953 taaaatatagaccaaatacaccatttatgcaatgaatcaaaaaagtaaaatatttcttataaataggaccggagggagtat 3065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 26622868 - 26622812
Alignment:
Q  19 ggtatttgaatccataggaaattaaagaggaagaggaagatgattgcatagccatga 75  Q
    |||||||||||  |||||||||| ||||||||||||| | |||||||||||||||||    
T  26622868 ggtatttgaattgataggaaattgaagaggaagaggatggtgattgcatagccatga 26622812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 26728846 - 26728790
Alignment:
Q  19 ggtatttgaatccataggaaattaaagaggaagaggaagatgattgcatagccatga 75  Q
    |||||||||||  |||||||||| ||||||||||||| | |||||||||||||||||    
T  26728846 ggtatttgaattgataggaaattgaagaggaagaggatggtgattgcatagccatga 26728790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 26802161 - 26802113
Alignment:
Q  151 acttcctggccacttgctatagccgtgtggaccaatcacacattaaata 199  Q
    ||||||||||||||| |||||||||||||||||||||| ||| ||||||    
T  26802161 acttcctggccacttcctatagccgtgtggaccaatcatacaataaata 26802113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 322 - 445
Target Start/End: Complemental strand, 28630896 - 28630773
Alignment:
Q  322 cttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatga 421  Q
    |||| |||| ||||| || ||| ||||||||||||| ||||| ||  ||| | ||||||| | |||| | ||||||| | |||||| ||||| |||||||    
T  28630896 cttcagtcctatttataagaaacaattgactttttagattcattgcataaattatgtatttggtctatattatagacaagatacatcaattactcaatga 28630797  T
Q  422 atcaaataagtcaaatatttctta 445  Q
    || ||| ||||||||| |||||||    
T  28630796 ataaaaaaagtcaaatttttctta 28630773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 28786019 - 28785980
Alignment:
Q  149 aaacttcctggccacttgctatagccgtgtggaccaatca 188  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  28786019 aaacttcctggccacttcctatagccgtgtggaccaatca 28785980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 469
Target Start/End: Original strand, 30895257 - 30895336
Alignment:
Q  390 aatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtatta 469  Q
    ||||||||||||||| || | |||| |||||||||||| ||||||||| ||||||| ||| ||||  ||| |||||||||    
T  30895257 aatatagaccaaatatatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataagactggatggagtatta 30895336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 426
Target Start/End: Complemental strand, 2230498 - 2230388
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| ||||| || |||   ||||||||||| ||||| ||||||||| ||||||    |||| |||||||||||| ||||| | |||||    
T  2230498 tactccctccggtcctatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctagaatatagaccaagtacatcatttatt 2230399  T
Q  416 caatgaatcaa 426  Q
    ||| |||||||    
T  2230398 caacgaatcaa 2230388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 26055818 - 26055748
Alignment:
Q  52 aggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    |||||| ||||||||||||||||||| |||| ||||||| |||||| ||||| ||||| |||  |||||||    
T  26055818 aggaaggtgattgcatagccatgagaattgaaagaatatggatgaaaaaagactttgaaaatggagaatat 26055748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 27593327 - 27593373
Alignment:
Q  31 cataggaaattaaagaggaagaggaagatgattgcatagccatgaga 77  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  27593327 cataggaaattgaagtggaagaggaaggtgattgcatagccatgaga 27593373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 27677921 - 27677967
Alignment:
Q  31 cataggaaattaaagaggaagaggaagatgattgcatagccatgaga 77  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  27677921 cataggaaattgaagtggaagaggaaggtgattgcatagccatgaga 27677967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 445
Target Start/End: Complemental strand, 12450484 - 12450371
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    ||||| || ||||| |||||||||| |||||| ||  ||| |||||||||  ||||| | | ||||  |||||||| |||||||||||||||| || |||    
T  12450484 atttataagaaatatttgacttttttaattcattgcataaatgatgtatttaatctatattttagataaaatacatcaattattcaatgaatccaaaaag 12450385  T
Q  432 tcaaatatttctta 445  Q
    | ||| ||||||||    
T  12450384 ttaaacatttctta 12450371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 26048736 - 26048667
Alignment:
Q  53 ggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||| ||||||||||||||||||| |||| ||||||| |||||| ||||| ||||| |||  |||||||    
T  26048736 ggaaggtgattgcatagccatgagaattgaaagaatatggatgaaaaaagactttgaaaatggagaatat 26048667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 26069905 - 26069836
Alignment:
Q  53 ggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||| ||||||||||||||||||| |||| ||||||| |||||| ||||| ||||| |||  |||||||    
T  26069905 ggaaggtgattgcatagccatgagaattgaaagaatatggatgaaaaaagactttgaaaatggagaatat 26069836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 26075787 - 26075718
Alignment:
Q  53 ggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||| ||||||||||||||||||| |||| ||||||| |||||| ||||| ||||| |||  |||||||    
T  26075787 ggaaggtgattgcatagccatgagaattgaaagaatatggatgaaaaaagactttgaaaatggagaatat 26075718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 26142756 - 26142687
Alignment:
Q  53 ggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||| ||||||||||||||||||| |||| ||||||| |||||| ||||| ||||| |||  |||||||    
T  26142756 ggaaggtgattgcatagccatgagaattgaaagaatatggatgaaaaaagactttgaaaatggagaatat 26142687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 424
Target Start/End: Complemental strand, 7649912 - 7649840
Alignment:
Q  352 tttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    |||||||||||| ||| |||||||| |||| | | || | | |||||||||||||| ||||||||||||||||    
T  7649912 tttttaaattcattgaataattgatttatttggtatatattttagaccaaatacatcaattattcaatgaatc 7649840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 427
Target Start/End: Original strand, 20703458 - 20703510
Alignment:
Q  375 atgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaa 427  Q
    ||||||| | |||| ||||||||||||||||||||| ||||||||||| ||||    
T  20703458 atgtatttggtctataatatagaccaaatacattaaatattcaatgaaccaaa 20703510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 27338546 - 27338586
Alignment:
Q  149 aaacttcctggccacttgctatagccgtgtggaccaatcac 189  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  27338546 aaacttcttggccacttcctatagccgtgtggaccaatcac 27338586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 27399286 - 27399326
Alignment:
Q  149 aaacttcctggccacttgctatagccgtgtggaccaatcac 189  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  27399286 aaacttcttggccacttcctatagccgtgtggaccaatcac 27399326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 27725321 - 27725377
Alignment:
Q  149 aaacttcctggccacttgctatagccgtgt-ggaccaatcacacattaaataacatt 204  Q
    ||||||||||||||||| |||||||||||| |||||||||| ||| |||||| ||||    
T  27725321 aaacttcctggccacttcctatagccgtgtgggaccaatcatacaataaatatcatt 27725377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 33119980 - 33119924
Alignment:
Q  389 aaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||||||  | |||| |||||||||||| ||||||||| |||||||    
T  33119980 aaatatagaccaaatacaacatttatacaatgaatcaaagaagtcaaatgtttctta 33119924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 27427904 - 27427999
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||| ||||||||| | |||||||| || ||| | ||||||| ||||||||| |||||||||   ||||||   |||||||||||||| ||||||||    
T  27427904 tgaatgcataggaaaatgaagaggaatagaaaggtaattgcatggccatgagaattgagagaaataagatgag--aagagtttgagaatgcagaatat 27427999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 27586227 - 27586277
Alignment:
Q  149 aaacttcctggccacttgctatagccgtgtggaccaatcacacattaaata 199  Q
    |||||||||||||||||   |||||||||||||||||||||| | ||||||    
T  27586227 aaacttcctggccactttgaatagccgtgtggaccaatcacatactaaata 27586277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 380
Target Start/End: Original strand, 25538004 - 25538045
Alignment:
Q  339 aaaaataattgactttttaaattcaatgagtaattgatgtat 380  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||    
T  25538004 aaaaaaaattgactttttagattcattgagtaattgatgtat 25538045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 25538431 - 25538362
Alignment:
Q  53 ggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||| ||||||||||||||||||| |||| ||||| | |||||| ||||| ||||| |||  |||||||    
T  25538431 ggaaggtgattgcatagccatgagaattgaaagaatttggatgaaaaaagactttgaaaatggagaatat 25538362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 473
Target Start/End: Complemental strand, 30438808 - 30438735
Alignment:
Q  400 aaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtattatttt 473  Q
    ||||||||||||||||| ||||||| || ||||||| | ||||||| ||  | ||| | |||||||||||||||    
T  30438808 aaatacattaattattctatgaatctaaaaagtcaactttttcttataataaggatcgaagggagtattatttt 30438735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 1837032 - 1836980
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| ||||||||||| ||||||| |||| || | |||||||    
T  1837032 atagaccaaatacatcaattattcaattaatcaaaaaagtaaattgtttctta 1836980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 445
Target Start/End: Original strand, 8052924 - 8052984
Alignment:
Q  385 tctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||| |||| |||| |||||||||| || | |||||||| ||| |||||||||||||||||    
T  8052924 tctagaataaagactaaatacattatttgtacaatgaattaaaaaagtcaaatatttctta 8052984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 8646751 - 8646699
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||| ||| || |||||||||||||||| |||| || |||||||||    
T  8646751 atagaccaaatgcatcaactattcaatgaatcaaaaaagtaaattatttctta 8646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 2e-41; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 149 - 259
Target Start/End: Original strand, 18699880 - 18699990
Alignment:
Q  149 aaacttcctggccacttgctatagccgtgtggaccaatcacacattaaataacattctactgccacatcttcttggcaatttcttcaatgtgattgctgt 248  Q
    |||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  18699880 aaacttcctgactacttcctatagccgtgtggaccaatcacacattaaataacattctactgccacatcttcttgctaatttcttcaatgtgattgctgt 18699979  T
Q  249 tcatctttcgg 259  Q
    ||| |||||||    
T  18699980 tcaactttcgg 18699990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 149 - 259
Target Start/End: Original strand, 18680041 - 18680155
Alignment:
Q  149 aaacttcctggccacttgctatagccgtgtggaccaatcacacatta----aataacattctactgccacatcttcttggcaatttcttcaatgtgattg 244  Q
    |||||||||| | |||| |||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  18680041 aaacttcctgactacttcctatagccgtgtggaccaatcacacattaattaaataacattctactgccacatcttcttgctaatttcttcaatgtgattg 18680140  T
Q  245 ctgttcatctttcgg 259  Q
    ||||||| |||||||    
T  18680141 ctgttcaactttcgg 18680155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 316 - 466
Target Start/End: Original strand, 48361051 - 48361201
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| ||||| || ||| | ||||||||||| ||||| |||||||||||||||||   |||| |||||||||||||||||| | ||||     
T  48361051 tactccctccggtcctatttataagaaaaatttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatg 48361150  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagta 466  Q
    |||||||||||| ||||||||| ||||||| ||| | || |||||||||||    
T  48361151 caatgaatcaaaaaagtcaaatgtttcttataaataggacaggagggagta 48361201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 18655923 - 18655996
Alignment:
Q  162 acttgctatagccgtgtggaccaatcacacattaaataacattctactgccacatcttcttggcaatttcttca 235  Q
    |||| |||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||    
T  18655923 actttctatagccgtgtggaccaatcacacagtaaataacattgtaatgccacatcttcttggcaatttcttca 18655996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 18699688 - 18699785
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    |||||| |||||||| | ||||||| ||||||| ||||||||||||||||||| |||||||||  |||||||| ||||||||||||||| ||||||||    
T  18699688 tgaatcgataggaaaatgaagaggatgaggaaggtgattgcatagccatgagaattgagagaaactagatgaaaaaagagtttgagaatgcagaatat 18699785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 327 - 469
Target Start/End: Original strand, 30191906 - 30192048
Alignment:
Q  327 gtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaa 426  Q
    |||| ||||| || ||| |||||| |||||| ||||| |||||||||||||||||   |||| |||||||||||||||||| | |||| |||||||||||    
T  30191906 gtcctatttataagaaaaaattgattttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaatcaa 30192005  T
Q  427 ataagtcaaatatttcttagaaacaagataggagggagtatta 469  Q
    | |||| |||| ||||||| ||| | ||  |||||||||||||    
T  30192006 aaaagttaaatgtttcttataaatacgaccggagggagtatta 30192048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 332 - 445
Target Start/End: Original strand, 16412249 - 16412362
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    ||||| || ||| ||||||||||||| ||||| ||| |||||||| |||| | |||| |||||||||||||||||||| |||| |||||  ||||| |||    
T  16412249 atttataagaaaaaattgactttttagattcattgaataattgatatatttggtctagaatatagaccaaatacattatttatgcaatgtgtcaaagaag 16412348  T
Q  432 tcaaatatttctta 445  Q
    ||||||||||||||    
T  16412349 tcaaatatttctta 16412362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 347 - 445
Target Start/End: Original strand, 4386166 - 4386264
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||||| | |||||||||||||||  ||||| ||||||||| |||||||| | ||||  ||||||||||| ||||||||| |||||||    
T  4386166 ttgactttttaaattcattaagtaattgatgtattttatctacaatatagactaaatacatcatttatgtaatgaatcaaaaaagtcaaatttttctta 4386264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 347 - 441
Target Start/End: Complemental strand, 25477663 - 25477569
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatattt 441  Q
    ||||||||||||||||| |||||||||||||||||   | || |||||||| ||||||||| | |||| |||||||||||| |||||||||||||    
T  25477663 ttgactttttaaattcattgagtaattgatgtattttgtgtagaatatagatcaaatacatcatttatgcaatgaatcaaaaaagtcaaatattt 25477569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 347 - 473
Target Start/End: Original strand, 8347675 - 8347801
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttag 446  Q
    ||||||||||| ||||| ||||| |||||||||||   | ||||||||||||| ||||||| | |||| |||||||| ||| ||||||||| |||||||     
T  8347675 ttgactttttagattcattgagtgattgatgtattttgtataaaatatagaccgaatacatcatttatacaatgaataaaaaaagtcaaatgtttcttat 8347774  T
Q  447 aaacaagataggagggagtattatttt 473  Q
    |||  |||  ||||| |||||||||||    
T  8347775 aaattagaccggaggaagtattatttt 8347801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 441
Target Start/End: Complemental strand, 45828561 - 45828439
Alignment:
Q  319 tcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaa 418  Q
    |||||||||||| ||||| || ||| |||||| |||||| ||||| ||||||||| ||||||| | |||| |||||| ||||||||||| | ||||  ||    
T  45828561 tcccttcggtcctatttataagaaaaaattgattttttagattcattgagtaattaatgtatttggtctataatataaaccaaatacatcatttatgtaa 45828462  T
Q  419 tgaatcaaataagtcaaatattt 441  Q
     |||||||| || ||||||||||    
T  45828461 agaatcaaaaaaatcaaatattt 45828439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 468
Target Start/End: Original strand, 47943728 - 47943878
Alignment:
Q  318 ctcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattca 417  Q
    ||||||||||||| ||||| |  ||| ||||||||||||| ||| | ||||||||| ||||| | | | |||||||||||| |||||||| | |||| ||    
T  47943728 ctcccttcggtcctatttatatgaaaaaattgactttttagattaattgagtaattaatgtacttggtataaaatatagactaaatacatcatttatgca 47943827  T
Q  418 atgaatcaaataagtcaaatatttcttagaaacaagataggagggagtatt 468  Q
    |||||||||| | ||||||| ||  ||| ||| ||||  ||||||||||||    
T  47943828 atgaatcaaaaatgtcaaatgttatttataaataagaccggagggagtatt 47943878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 470
Target Start/End: Original strand, 48195889 - 48196043
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||||||  ||||| ||||| || ||| || | |||||||||||||| ||||||||||| ||||    |||| |||||||||||||||||| | ||||     
T  48195889 tactccctctggtcctatttataagaaaaaactaactttttaaattcattgagtaattgacgtatcttgtctagaatatagaccaaatacatcatttatg 48195988  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtattat 470  Q
    ||||||| |||| ||||||||| ||||||| ||| | ||  ||||| ||||||||    
T  48195989 caatgaaccaaaaaagtcaaatgtttcttataaataggaccggaggaagtattat 48196043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 18655765 - 18655862
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    |||||| |||||||| | ||||||| ||||||| ||||||| ||||||||| | |||||||||  | |||||| ||||||||||||||| ||||||||    
T  18655765 tgaatcgataggaaaatgaagaggatgaggaaggtgattgcctagccatgaaaattgagagaaactggatgaaaaaagagtttgagaatgcagaatat 18655862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 18731792 - 18731889
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    |||||| |||||||| | ||||||| ||||||| ||||||||||||||||| | | |||||||  | |||||| ||||||||||||||| ||||||||    
T  18731792 tgaatcgataggaaaatgaagaggatgaggaaggtgattgcatagccatgaaaatcgagagaaactggatgaaaaaagagtttgagaatgcagaatat 18731889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 437
Target Start/End: Complemental strand, 53225793 - 53225672
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| ||||| || ||| ||||||||||||| ||||| ||| ||||| ||||||| | | || ||| |||||||||||||| | ||||     
T  53225793 tactccctccggtcctatttataagaaaaaattgactttttagattcattgaataattaatgtatttggtatagaatgtagaccaaatacatcatttatg 53225694  T
Q  416 caatgaatcaaataagtcaaat 437  Q
    |||||||||||| |||| ||||    
T  53225693 caatgaatcaaaaaagtaaaat 53225672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 467
Target Start/End: Complemental strand, 44111895 - 44111743
Alignment:
Q  315 ctactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattat 414  Q
    ||||||||| |||||  ||||| || ||| | ||||||||||| ||||| ||||||||||||||||    | || |||||||||||||||||| | ||||    
T  44111895 ctactccctccggtcttatttataagaaaaagttgactttttagattcattgagtaattgatgtatcttctttagaatatagaccaaatacatcatttat 44111796  T
Q  415 tcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtat 467  Q
      ||| ||||||| ||||||||| ||||||| ||| | ||  |||||||||||    
T  44111795 gtaattaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtat 44111743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 441
Target Start/End: Complemental strand, 21554226 - 21554133
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatattt 441  Q
    |||| |||||| ||||| ||||||||| ||||||| ||| || |||||||||||||||||| | |||| ||||||||| || |||||||||||||    
T  21554226 ttgattttttagattcattgagtaattaatgtatt-gatatagaatatagaccaaatacatcatttatgcaatgaatcgaaaaagtcaaatattt 21554133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 18679855 - 18679952
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    |||||| |||||||| | ||||| | ||||||| ||||||||||||||||| | | |||||||  | |||||| ||||||||||||||| ||||||||    
T  18679855 tgaatcgataggaaaatgaagagaatgaggaaggtgattgcatagccatgaaaatagagagaaactggatgaaaaaagagtttgagaatgcagaatat 18679952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 43117997 - 43117892
Alignment:
Q  322 cttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatga 421  Q
    ||||||| | ||||| || ||| |||||| |||||| ||||| ||| ||||||||||||| | | ||||||||||||||||||||| | |||| |||| |    
T  43117997 cttcggttctatttataagaaaaaattgattttttacattcattgaataattgatgtatttggtataaaatatagaccaaatacatcatttatgcaataa 43117898  T
Q  422 atcaaa 427  Q
    ||||||    
T  43117897 atcaaa 43117892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 365 - 445
Target Start/End: Complemental strand, 9044487 - 9044407
Alignment:
Q  365 tgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||||   |||| ||||||| ||||| |||| | |||| |||||||||||| |||||||||||||||||    
T  9044487 tgagtaattgatgtattttgtctagaatataggccaaagacatcatttatacaatgaatcaaaaaagtcaaatatttctta 9044407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 18732020 - 18732060
Alignment:
Q  194 taaataacattctactgccacatcttcttggcaatttcttc 234  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18732020 taaataacattctactgccacatcttcttggcaatttcttc 18732060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 468
Target Start/End: Complemental strand, 36132768 - 36132632
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    ||||| || ||| ||||||||||| | || || |||||| |||||||||    |||  ||||||||| |||||||| | |||| |||||||||||| |||    
T  36132768 atttataagaaaaaattgacttttaagatacattgagtagttgatgtatcttgtcttgaatatagactaaatacatcatttatacaatgaatcaaaaaag 36132669  T
Q  432 tcaaatatttcttagaaacaagataggagggagtatt 468  Q
    |||||||||||||| ||| | ||  ||||||||||||    
T  36132668 tcaaatatttcttataaataggactggagggagtatt 36132632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 471
Target Start/End: Complemental strand, 48361201 - 48361046
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| | |||| ||||| || ||| | ||||||||||  ||||| ||  ||| ||||||||| | |||| | | ||||| |||||||| ||||| |    
T  48361201 tactccctcctgtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattact 48361102  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtattatt 471  Q
    ||||||||| || ||||||||| ||||||| ||| | ||  |||||||||||||||    
T  48361101 caatgaatctaaaaagtcaaatttttcttataaataggaccggagggagtattatt 48361046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 325 - 407
Target Start/End: Original strand, 41116570 - 41116652
Alignment:
Q  325 cggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacat 407  Q
    |||||| ||||| || ||| | || |||||||| ||||| ||||||||||||||||   ||||||||||||||||||||||||    
T  41116570 cggtcctatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagaccaaatacat 41116652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 18724537 - 18724581
Alignment:
Q  149 aaacttcctggccacttgctatagccgtgtggaccaatcacacat 193  Q
    |||||||||| |||||| |||||||||||||||||||||||||||    
T  18724537 aaacttcctgaccacttcctatagccgtgtggaccaatcacacat 18724581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 424
Target Start/End: Original strand, 26066384 - 26066476
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    ||||| || ||||||||||||||  | ||||| ||| |||||||||||| || |||| ||||||||||| |||||| | ||||| ||||||||    
T  26066384 atttataagaaataattgactttcaagattcattgaataattgatgtatccggtctagaatatagaccagatacatcagttatttaatgaatc 26066476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 323 - 422
Target Start/End: Original strand, 2643614 - 2643713
Alignment:
Q  323 ttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaa 422  Q
    |||||||| ||||| || |||||||||||||||||  |||| ||| ||||| ||||| |   ||||||||||| ||||||||| ||| ||||| ||||||    
T  2643614 ttcggtcctatttataagaaataattgactttttagtttcattgaataatttatgtacttagtctaaaatatacaccaaatactttatttatttaatgaa 2643713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 18724373 - 18724432
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgaga 84  Q
    |||||| |||||||| | ||||||| ||||||| ||||||||||||||||||| ||||||    
T  18724373 tgaatcgataggaaaatgaagaggatgaggaaggtgattgcatagccatgagaattgaga 18724432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 454
Target Start/End: Original strand, 3162910 - 3163032
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    ||||| || ||| ||||||||||||||||||| || |||||| || |||    |||| |||||||||  ||||||| | |||| |||||||||||| |||    
T  3162910 atttataagaaaaaattgactttttaaattcattgtgtaattaatatatcttgtctagaatatagactcaatacatcatttatgcaatgaatcaaaaaag 3163009  T
Q  432 tcaaatatttcttagaaacaaga 454  Q
    |||||| ||| ||| ||| ||||    
T  3163010 tcaaatgttttttataaataaga 3163032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 467
Target Start/End: Original strand, 53225724 - 53225794
Alignment:
Q  397 accaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtat 467  Q
    |||||||||||||||||||||||||||| || ||||||| | ||||||| ||| | ||  |||||||||||    
T  53225724 accaaatacattaattattcaatgaatctaaaaagtcaattttttcttataaataggaccggagggagtat 53225794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 445
Target Start/End: Complemental strand, 1204649 - 1204537
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    |||||||| ||| ||||||||||||| ||| | ||| ||||| |||||| | | ||||| |||||||| ||||||| ||||||  ||| ||||||| |||    
T  1204649 atttacaagaaacaattgactttttagattaagtgaataatttatgtatccaacctaaa-tatagaccgaatacatcaattatctaataaatcaaaaaag 1204551  T
Q  432 tcaaatatttctta 445  Q
    |||||  |||||||    
T  1204550 tcaaacgtttctta 1204537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 335 - 440
Target Start/End: Complemental strand, 17284865 - 17284760
Alignment:
Q  335 tacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtca 434  Q
    ||||||||| || | |||||||||||| | ||  ||||||||||||    |||| ||||||||||| |||||| | |||| |||||||||||| || |||    
T  17284865 tacaaaaaaaaaattactttttaaatttattgtataattgatgtatcttgtctagaatatagaccacatacatcatttatgcaatgaatcaaaaaaatca 17284766  T
Q  435 aatatt 440  Q
    ||||||    
T  17284765 aatatt 17284760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 445
Target Start/End: Complemental strand, 44061501 - 44061408
Alignment:
Q  352 tttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||| || ||||||  |||||    |||| |||||||||||||||||||| |||| |||||||||||| || |||||  |||||||    
T  44061501 tttttaaattcattgtgtaattagtgtatcttgtctagaatatagaccaaatacattatttatgcaatgaatcaaaaaactcaaacgtttctta 44061408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 50121436 - 50121565
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||||||||||||  ||||| || ||| | ||||||||||| ||| | ||| | ||||||||||    ||||  |||||||||||||| || | ||||     
T  50121436 tactcccttcggtcttatttataagaaaaatttgactttttagatttattgaatgattgatgtatcttgtctagtatatagaccaaatatatcatttatg 50121535  T
Q  416 caatgaatcaaataagtcaaatatttctta 445  Q
    |||||||| ||| ||||||||| |||||||    
T  50121536 caatgaattaaaaaagtcaaatgtttctta 50121565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 467
Target Start/End: Original strand, 25477555 - 25477695
Alignment:
Q  327 gtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaa 426  Q
    |||| ||||| |||||||| ||||||||||  ||||| ||  ||| ||||||||| |||||| | | || || |||||||| ||||| |||||||||  |    
T  25477555 gtcctatttataaaaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctacacaaaatacatcaattactcaatgaattta 25477654  T
Q  427 ataagtcaaatatttcttagaaacaagataggagggagtat 467  Q
    | ||||||||  ||||||| ||| | | | |||||||||||    
T  25477655 aaaagtcaaaattttcttataaatatggtcggagggagtat 25477695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 34226467 - 34226420
Alignment:
Q  384 atctaaaatatagaccaaatacattaattattcaatgaatcaaataagt 432  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| ||||    
T  34226467 atctaaaa-atagaccaaatacatcaattattcaatgaatcaaaaaagt 34226420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 445
Target Start/End: Complemental strand, 35429873 - 35429793
Alignment:
Q  365 tgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||||    |||| ||||||||||||||||||   |||| ||| |||| ||| |||||||||||||||||    
T  35429873 tgagtaattgatgtatcttgtctagaatatagaccaaatacatcttttatgcaacgaataaaaaaagtcaaatatttctta 35429793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 53658444 - 53658384
Alignment:
Q  385 tctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||| |||||||||||||||||||| | || |||||||| ||| |||| ||||||||||||    
T  53658444 tctagaatatagaccaaatacattattcatacaatgaataaaaaaagttaaatatttctta 53658384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 473
Target Start/End: Complemental strand, 24100822 - 24100751
Alignment:
Q  402 atacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtattatttt 473  Q
    ||||||||||||||||||||||| || |||| || ||||||||| ||  | ||| |||||||||| ||||||    
T  24100822 atacattaattattcaatgaatctaaaaagttaattatttcttataataaggatcggagggagtaatatttt 24100751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 445
Target Start/End: Complemental strand, 32714395 - 32714289
Alignment:
Q  338 aaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaat 437  Q
    |||||| ||||||||||| | ||||| | | | |||||||||||   |||| ||||||||| |||||||| | ||||  ||||||||||| |||||||||    
T  32714395 aaaaaaaaattgactttt-agattcattcaatgattgatgtattttgtctagaatatagactaaatacatcatttatgtaatgaatcaaaaaagtcaaat 32714297  T
Q  438 atttctta 445  Q
     |||||||    
T  32714296 gtttctta 32714289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 437
Target Start/End: Complemental strand, 42169182 - 42169071
Alignment:
Q  326 ggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatca 425  Q
    ||||| ||||| || ||| | ||||||||||| ||| | ||| |||||||||||||   |||  ||||| |||||||||||| | ||||  |||||||||    
T  42169182 ggtcctatttataagaaaaatttgactttttagatttattgaataattgatgtattttgtcttgaatatggaccaaatacatcatttatgtaatgaatca 42169083  T
Q  426 aataagtcaaat 437  Q
    || |||||||||    
T  42169082 aaaaagtcaaat 42169071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 17989338 - 17989433
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||| ||||||||| | |||||||| || ||| | ||||||| ||||||||| |||||||||   ||||||   |||||||||||||| ||||||||    
T  17989338 tgaatgcataggaaaatgaagaggaatagaaaggtaattgcatggccatgagaattgagagaaataagatgag--aagagtttgagaatgcagaatat 17989433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 18073651 - 18073556
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||| ||||||||| | |||||||| || ||| | ||||||| ||||||||| |||||||||   ||||||   |||||||||||||| ||||||||    
T  18073651 tgaatgcataggaaaatgaagaggaatagaaaggtaattgcatggccatgagaattgagagaaataagatgag--aagagtttgagaatgcagaatat 18073556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 350 - 424
Target Start/End: Original strand, 25700486 - 25700560
Alignment:
Q  350 actttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    |||||||| ||||| | ||||| ||||||||  |||||| ||||||||||| |||||| | ||||| ||||||||    
T  25700486 actttttagattcattcagtaaatgatgtatgtgatctacaatatagaccacatacatcatttattgaatgaatc 25700560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 45096649 - 45096723
Alignment:
Q  392 tatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagta 466  Q
    ||||||||||||| || | |||| |||| ||||||| ||||||||| ||| ||| ||| | ||||||||||||||    
T  45096649 tatagaccaaatatatcatttatgcaataaatcaaaaaagtcaaatgttttttataaatatgataggagggagta 45096723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 45828490 - 45828543
Alignment:
Q  392 tatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||||||||| |||||||||| || || |||| | |||||||    
T  45828490 tatagaccaaatacattaattactcaatgaatctaaaaaatcaattttttctta 45828543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 20459313 - 20459261
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  20459313 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 20459261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 43020831 - 43020883
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  43020831 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 43020883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 47866111 - 47866163
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  47866111 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 47866163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 317 - 444
Target Start/End: Complemental strand, 19649727 - 19649600
Alignment:
Q  317 actcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattc 416  Q
    |||||||  ||||| |||||||| ||| | |||| |||||| ||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  19649727 actccctctggtcctatttacaagaaacatttgattttttagattcattgagtaattgatgtattcggtctaaaatatagactaaatacatcaattattc 19649628  T
Q  417 aatgaatcaaataagtcaaatatttctt 444  Q
    ||||||||||| ||||||||| ||||||    
T  19649627 aatgaatcaaaaaagtcaaatgtttctt 19649600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 316 - 469
Target Start/End: Complemental strand, 28406616 - 28406463
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| |||||||| ||| |||||||||||||  |||| ||| ||||| |||||  || |||| ||||||||||||||||||||||||||    
T  28406616 tactccctccggtcctatttacaagaaacaattgactttttaggttcattgaataatttatgtacccggtctagaatatagaccaaatacattaattatt 28406517  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtatta 469  Q
    ||| ||||| || ||||||| | ||||||  ||| | ||  |||||||||||||    
T  28406516 caacgaatctaaaaagtcaattgtttcttgtaaataggaccggagggagtatta 28406463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 350 - 474
Target Start/End: Original strand, 8266266 - 8266388
Alignment:
Q  350 actttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaa 449  Q
    |||||||| ||||| |||||||||||||||||  ||||||||||||  ||||| |||||| |||| |||||||||||| ||||||||| ||||||| |||    
T  8266266 actttttagattcattgagtaattgatgtattttatctaaaatata--ccaaacacattatttatacaatgaatcaaaaaagtcaaatgtttcttataaa 8266363  T
Q  450 caagataggagggagtattattttt 474  Q
     | ||  |||||||||||| |||||    
T  8266364 taggaccggagggagtattcttttt 8266388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 316 - 466
Target Start/End: Original strand, 21662885 - 21663035
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| ||||| || ||| | ||||||||||| ||||| ||||||||| ||||| | | | || | |||||||||||||||| | ||||     
T  21662885 tactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtatagattatagaccaaatacatcatttatg 21662984  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagta 466  Q
    |||||||||||| |||| |||| ||||||| ||| ||||  ||||||||||    
T  21662985 caatgaatcaaaaaagttaaatgtttcttataaataagaccggagggagta 21663035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 313 - 469
Target Start/End: Complemental strand, 53442059 - 53441903
Alignment:
Q  313 aactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaatt 412  Q
    ||||||||||| |||||| ||||| || ||| | ||||||||||||||||| ||| ||||| ||||| | | | || ||| || ||||||||||| | ||    
T  53442059 aactactccctccggtcctatttataagaaaaagttgactttttaaattcattgaataattaatgtacttggtatagaatgtataccaaatacatcattt 53441960  T
Q  413 attcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtatta 469  Q
    || |||||||||||| |||| |||| ||||||| ||| | ||  |||||||||||||    
T  53441959 atgcaatgaatcaaaaaagtaaaatgtttcttataaataggaccggagggagtatta 53441903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 12747846 - 12747717
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||| || |||||| ||||| || ||| |||||| |||||| |||||  |||||||||||||||| | |||| |||||| ||||||||||  | ||||     
T  12747846 tactctctccggtcctatttataagaaaaaattgattttttagattcatcgagtaattgatgtatttggtctagaatatacaccaaatacacaatttatg 12747747  T
Q  416 caatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||| || |||||| |||||||    
T  12747746 caatgaatcaaaaaaatcaaatgtttctta 12747717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 441
Target Start/End: Original strand, 52864984 - 52865075
Alignment:
Q  350 actttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatattt 441  Q
    |||||||| ||||| ||||||||||||||||   ||||||||||||||| ||||| || | |||| |||||||||||| ||||||| |||||    
T  52864984 actttttagattcattgagtaattgatgtatcttatctaaaatatagactaaatatatcatttatgcaatgaatcaaaaaagtcaattattt 52865075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 445
Target Start/End: Original strand, 44518066 - 44518164
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||| ||||| ||||||||| ||||||    ||||||||||||||||||||||| | |||  |||||||||||| ||||||||  |||||||    
T  44518066 ttgactttttagattcattgagtaattaatgtatcttgtctaaaatatagaccaaatacatcatttagacaatgaatcaaaaaagtcaaagttttctta 44518164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 54537442 - 54537571
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||||||||| ||| ||||| || ||| | ||||||||| | ||||| ||||||||||||||||    |||| |||||||| ||||||||  | ||||     
T  54537442 tactcccttcgatcctatttataagaaaaatttgacttttaagattcattgagtaattgatgtatctagtctagaatatagatcaaatacacaatttatg 54537541  T
Q  416 caatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||| |||||||  ||||||||    
T  54537542 caatgaatcaaaaaagtcaataatttctta 54537571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 348 - 424
Target Start/End: Original strand, 48593173 - 48593249
Alignment:
Q  348 tgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    |||||||||| || || ||| ||||||||||||  | |||| |||||||||||||||||| ||||||||||||||||    
T  48593173 tgactttttagatacattgaataattgatgtatcgggtctagaatatagaccaaatacataaattattcaatgaatc 48593249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 390 - 464
Target Start/End: Original strand, 36985229 - 36985303
Alignment:
Q  390 aatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggag 464  Q
    ||||||||| |||||||||| |||| |||||||||||| |||||||| |||||||| |||  |||| ||||||||    
T  36985229 aatatagactaaatacattatttatgcaatgaatcaaaaaagtcaaaaatttcttataaatgagattggagggag 36985303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 390 - 464
Target Start/End: Original strand, 37010668 - 37010742
Alignment:
Q  390 aatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggag 464  Q
    ||||||||| |||||||||| |||| |||||||||||| |||||||| |||||||| |||  |||| ||||||||    
T  37010668 aatatagactaaatacattatttatgcaatgaatcaaaaaagtcaaaaatttcttataaatgagattggagggag 37010742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 313 - 467
Target Start/End: Original strand, 51516954 - 51517107
Alignment:
Q  313 aactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaatt 412  Q
    ||||||||||| |||||| ||||| || ||| | ||||||||||| ||| |  |||||||| ||||| | |   || |||||||||||||||||| | ||    
T  51516954 aactactccctccggtcctatttataagaaaaagttgactttttagatt-atggagtaattaatgtacttggcatagaatatagaccaaatacatcattt 51517052  T
Q  413 attcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtat 467  Q
    || ||||||| |||| ||||||||| ||||||| ||| | ||  |||||||||||    
T  51517053 atgcaatgaaccaaaaaagtcaaatgtttcttataaataggaccggagggagtat 51517107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 442
Target Start/End: Original strand, 51723377 - 51723503
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||| |||| ||| ||||| || ||| | |||| |||||| ||||| ||||||||| ||||||| ||| || ||||||||| ||||| || | ||||     
T  51723377 tactccattcgatcctatttataagaaaaagttgattttttagattcattgagtaattaatgtatttgatatagaatatagactaaatatatcatttata 51723476  T
Q  416 caatgaatcaaataagtcaaatatttc 442  Q
    |||||||||||| |||| |||| ||||    
T  51723477 caatgaatcaaaaaagttaaatttttc 51723503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 473
Target Start/End: Complemental strand, 54537592 - 54537435
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||||||||||||| ||||| || |||| |||||||||||  ||||| ||  ||| |  |||||| |||||| | | ||||| | |||||| ||||| |    
T  54537592 tactcccttcggtcctatttataagaaattattgacttttttgattcattgcataaattgtgtatttgatctatattctagactagatacatcaattact 54537493  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtattatttt 473  Q
    |||||||||  | ||||||||| ||||||| ||| | ||| | |||||||||| ||||    
T  54537492 caatgaatcttaaaagtcaaatttttcttataaataggatcgaagggagtattttttt 54537435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 442
Target Start/End: Original strand, 9236120 - 9236212
Alignment:
Q  350 actttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttc 442  Q
    |||||||  ||||| ||||||||||||||||  ||| || ||||||||| ||||| || | ||||  ||||||||||| ||||||||||||||    
T  9236120 acttttttgattcattgagtaattgatgtatctgatatagaatatagactaaatatatcatttatgtaatgaatcaaaaaagtcaaatatttc 9236212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 445
Target Start/End: Complemental strand, 12065029 - 12064929
Alignment:
Q  345 aattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctt 444  Q
    ||||||||||||||||||| | ||||||| || ||||   | || |||||||||||||||||| | | || |||||||||||| |||| |||| ||||||    
T  12065029 aattgactttttaaattcattaagtaattaatatatttagtatagaatatagaccaaatacatcattaatgcaatgaatcaaaaaagtaaaatgtttctt 12064930  T
Q  445 a 445  Q
    |    
T  12064929 a 12064929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 444
Target Start/End: Original strand, 28406466 - 28406594
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| |||||||| ||| ||||||||||||| ||||  ||| ||||| ||||||| | |||| | | ||||||   ||||| |||||||    
T  28406466 tactccctccggtcctatttacaagaaacaattgactttttagattcgttgaataattaatgtatttggtctatattctagaccgggtacataaattatt 28406565  T
Q  416 caatgaatcaaataagtcaaatatttctt 444  Q
    ||||||| | || ||||||| | ||||||    
T  28406566 caatgaacctaaaaagtcaattgtttctt 28406594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 422
Target Start/End: Complemental strand, 32711317 - 32711245
Alignment:
Q  350 actttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaa 422  Q
    |||||||| ||||| ||| ||||||||||||  | |||| ||||||| |||||||||| ||||||||||||||    
T  32711317 actttttagattcattgaataattgatgtatctggtctataatataggccaaatacatcaattattcaatgaa 32711245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 445
Target Start/End: Complemental strand, 9197156 - 9197101
Alignment:
Q  390 aatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||| |||||||| | |||| |||||||||||| |||||||||||||||||    
T  9197156 aatatagacaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatttctta 9197101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 454
Target Start/End: Complemental strand, 23223071 - 23222969
Alignment:
Q  352 tttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaaca 451  Q
    |||||| ||||| ||||||| ||||||||    ||||||||||||||||||||||| | ||||  ||| ||| ||| ||||||||| ||||||| ||| |    
T  23223071 tttttagattcattgagtaactgatgtatcttgtctaaaatatagaccaaatacatcatttatataataaattaaaaaagtcaaatgtttcttataaata 23222972  T
Q  452 aga 454  Q
    |||    
T  23222971 aga 23222969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 445
Target Start/End: Complemental strand, 25910309 - 25910211
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| | ||||||||| ||||||| | | || |||||||||||||||||||  |||| || ||||| ||| |  |||||| |||||||    
T  25910309 ttgactttttaaatttattgagtaattaatgtatttggtgtagaatatagaccaaatacattctttatgcagtgaataaaaaatctcaaatgtttctta 25910211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 469
Target Start/End: Complemental strand, 21663035 - 21662882
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||  ||||| || ||| | || |||||||  ||||| ||  ||| ||||||||| | |||| ||| || ||||| ||||||||||| |    
T  21663035 tactccctccggtcttatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctataatctataccaagtacattaattact 21662936  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtatta 469  Q
    ||||||||| || ||||||| | ||||||| ||| | ||  |||||||||||||    
T  21662935 caatgaatctaaaaagtcaactttttcttataaataggaccggagggagtatta 21662882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 418
Target Start/End: Original strand, 34750942 - 34751015
Alignment:
Q  345 aattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaa 418  Q
    ||||||||| ||| ||||| |||||||||||| ||| |||||||||||||| |||  |||||| ||||| ||||    
T  34750942 aattgacttcttagattcattgagtaattgatatatccgatctaaaatataaaccggatacatgaattactcaa 34751015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 444
Target Start/End: Original strand, 19649594 - 19649706
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    |||||||| ||| | ||||||||||  ||||| ||| |||||||||||||   |||| | | |||||| ||||||| ||||| |||||||||| || ||     
T  19649594 atttacaagaaacatttgacttttttgattcattgaataattgatgtatttagtctatattttagaccgaatacatcaattactcaatgaatctaaaaaa 19649693  T
Q  432 tcaaatatttctt 444  Q
    |||||| ||||||    
T  19649694 tcaaatgtttctt 19649706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 467
Target Start/End: Original strand, 43448988 - 43449108
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttag 446  Q
    |||| |||||| ||||| |||||||||||| |||    ||||  ||||| ||||||||||| | |||| ||||||| |||| || ||||||||||||||     
T  43448988 ttgattttttagattcattgagtaattgatatatcttgtctatgatataaaccaaatacatcatttatacaatgaaccaaaaaaatcaaatatttcttat 43449087  T
Q  447 aaacaagataggagggagtat 467  Q
    ||| | ||| | |||||||||    
T  43449088 aaataggatcgaagggagtat 43449108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 445
Target Start/End: Complemental strand, 25954149 - 25954042
Alignment:
Q  338 aaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaat 437  Q
    |||||| || ||| |||||||||||| ||||||||| ||||||    |||| |||||||| |||||| || | ||||  ||||||| ||| ||||||||     
T  25954149 aaaaaaaaaatgattttttaaattcattgagtaattaatgtatcttgtctagaatatagatcaaatatatcatttatataatgaattaaaaaagtcaaac 25954050  T
Q  438 atttctta 445  Q
    ||||||||    
T  25954049 atttctta 25954042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 423
Target Start/End: Original strand, 29290777 - 29290884
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||| |||| |||||| |||| || ||| |||| |||||||| ||||| |||  || ||||||||  |||||| | ||||||| |||||||| | |||||    
T  29290777 tacttcctttggtcccttttataagaaaaaattcactttttagattcattgaacaactgatgtatctgatctatattatagactaaatacataagttatt 29290876  T
Q  416 caatgaat 423  Q
    ||||||||    
T  29290877 caatgaat 29290884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 441
Target Start/End: Complemental strand, 33808452 - 33808334
Alignment:
Q  322 cttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatga 421  Q
    ||||||||| ||||| || ||| ||||||||||||||||| | ||| ||||||||||||| |   || ||||| |||||| || |||| |||| |||| |    
T  33808452 cttcggtcctatttataagaaa-aattgactttttaaattaattgaataattgatgtatttggattagaatattgaccaagtatattatttatgcaataa 33808354  T
Q  422 atcaaataagtcaaatattt 441  Q
    || ||| || ||||||||||    
T  33808353 ataaaaaaaatcaaatattt 33808334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 460
Target Start/End: Complemental strand, 35099135 - 35099060
Alignment:
Q  385 tctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggag 460  Q
    |||| |||||||||||||||||| | |||| |||| ||| ||| |||| |||||||||||| ||| ||||| ||||    
T  35099135 tctagaatatagaccaaatacatcatttatacaataaattaaaaaagttaaatatttcttataaataagatgggag 35099060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 422
Target Start/End: Original strand, 31836482 - 31836512
Alignment:
Q  392 tatagaccaaatacattaattattcaatgaa 422  Q
    |||||||||||||||||||||||||||||||    
T  31836482 tatagaccaaatacattaattattcaatgaa 31836512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 350 - 424
Target Start/End: Original strand, 32711235 - 32711309
Alignment:
Q  350 actttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    ||||||||  |||| ||| ||||||||||||| |  ||| | ||||||||| |||||| ||||||||||||||||    
T  32711235 actttttaggttcattgaataattgatgtatttggcctatattatagaccagatacatcaattattcaatgaatc 32711309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 653324 - 653283
Alignment:
Q  378 tattcgatctaaaatatagaccaaatacattaattattcaat 419  Q
    |||| |||||||||| |||||||||||||| |||||||||||    
T  653324 tatttgatctaaaatttagaccaaatacatcaattattcaat 653283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 441
Target Start/End: Original strand, 8987744 - 8987853
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    ||||| || |||||||| | |||||| || || ||| ||| | ||||||| | |||| ||| || ||||||||||| ||||||| |||| ||| || |||    
T  8987744 atttataataaataattaattttttagatgcattgaataacttatgtatttggtctagaatttaaaccaaatacataaattattgaatgtatctaaaaag 8987843  T
Q  432 tcaaatattt 441  Q
    ||||||||||    
T  8987844 tcaaatattt 8987853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 29457912 - 29457860
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  29457912 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 29457860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 33068246 - 33068294
Alignment:
Q  375 atgtattcgatctaaaatatagaccaaatacattaattattcaatgaat 423  Q
    ||||||| | |||| ||||||||||||||| ||||| ||||||||||||    
T  33068246 atgtatttggtctataatatagaccaaatatattaaatattcaatgaat 33068294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 33371936 - 33371988
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| || | || |||||||||    
T  33371936 atagaccaaatacatcaactattcaatgaatcaaaaaaataaattatttctta 33371988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 420
Target Start/End: Original strand, 44593200 - 44593304
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||||||||||||  |||||||| ||| | |||||||||||||| || ||| ||||  ||||||   ||| ||||  || ||||||||||| |||||||    
T  44593200 tactcccttcggtcttatttacaagaaaaagttgactttttaaatacattgaataatatatgtatctaatcaaaaacttaaaccaaatacataaattatt 44593299  T
Q  416 caatg 420  Q
     ||||    
T  44593300 taatg 44593304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 48643687 - 48643731
Alignment:
Q  400 aaatacattaattattcaatgaatcaaataagtcaaatatttctt 444  Q
    ||||||||||||||||||||||||| || ||||||| | ||||||    
T  48643687 aaatacattaattattcaatgaatctaaaaagtcaattgtttctt 48643731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 313 - 469
Target Start/End: Complemental strand, 36245528 - 36245372
Alignment:
Q  313 aactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaatt 412  Q
    ||||||||||| | |||| ||||| || ||| ||||||||||||| ||||| ||||||||||||||||    |||| |||||||||||||||||| | ||    
T  36245528 aactactccctcctgtcctatttataagaaaaaattgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcattt 36245429  T
Q  413 attcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtatta 469  Q
    || |||||||||||| ||||||||| ||||||| ||||| ||  |||||||||||||    
T  36245428 atgcaatgaatcaaaaaagtcaaatgtttcttataaacaggaccggagggagtatta 36245372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 39153434 - 39153307
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||||||||||||  ||||| ||||||  ||||||||||||  |||| ||||||||||||||||| | |||| ||||||||| |||||||| | ||||     
T  39153434 tactcccttcggtcttatttataaaaaa--attgactttttagcttcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatg 39153337  T
Q  416 caatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||| ||||||||| |||||||    
T  39153336 caatgaatcaaaaaagtcaaatgtttctta 39153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 316 - 468
Target Start/End: Complemental strand, 28677466 - 28677314
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| || ||| ||||| || ||| ||||||||||||| ||| | ||||||||||||||||    |||| |||||||||||||||||| | ||||     
T  28677466 tactccctccgatcctatttataagaaaaaattgactttttagatttattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatg 28677367  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtatt 468  Q
    |||||||||||| ||||||||| ||||||| ||| | ||  ||||||||||||    
T  28677366 caatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtatt 28677314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 321 - 445
Target Start/End: Complemental strand, 8566225 - 8566101
Alignment:
Q  321 ccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatg 420  Q
    |||||||||| ||||| || ||| | |||| |||||| ||||| ||||||||||||||||    |||| |||||||||||||||||| | |||| |||||    
T  8566225 ccttcggtcctatttataagaaaaatttgattttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatg 8566126  T
Q  421 aatcaaataagtcaaatatttctta 445  Q
    ||||||| |||| |||| |||||||    
T  8566125 aatcaaaaaagttaaatgtttctta 8566101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 467
Target Start/End: Complemental strand, 11668164 - 11668013
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||| |||||||||| ||||| || ||| | ||||||||||| ||||| ||| ||||||||||||    |||| |||||||| |||||| || | ||||     
T  11668164 tacttccttcggtcctatttataagaaaaatttgactttttacattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatg 11668065  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtat 467  Q
    |||||||||||| ||||||||| ||||||| ||| | ||  |||||||||||    
T  11668064 caatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtat 11668013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 466
Target Start/End: Original strand, 45533258 - 45533379
Alignment:
Q  345 aattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctt 444  Q
    ||||||||||||| ||||| |  |||||| ||||||    |||| |||||||||||||||||||| |||| |||||||| ||| ||||||||| ||||||    
T  45533258 aattgactttttagattcattatgtaattaatgtatcttgtctagaatatagaccaaatacattatttatacaatgaattaaaaaagtcaaatgtttctt 45533357  T
Q  445 agaaacaagataggagggagta 466  Q
    | ||| |||| |||||| ||||    
T  45533358 ataaataagacaggaggaagta 45533379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 347 - 442
Target Start/End: Complemental strand, 30869304 - 30869209
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttc 442  Q
    ||||||||||| ||||| ||||||||||||||||    |||| |||||||||||||||||||| |||| |||| ||||||| | ||||||| ||||    
T  30869304 ttgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacattatttatacaataaatcaaaaacgtcaaatgtttc 30869209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 454
Target Start/End: Complemental strand, 2523919 - 2523781
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| ||||| || ||| | ||||||||||| ||||| ||||||||| ||||| | |   || ||||||||||| ||||||   ||||     
T  2523919 tactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggcatagaatatagaccagatacatcgtttatg 2523820  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaaga 454  Q
    |||||||||||| ||||||||| ||||||| ||| ||||    
T  2523819 caatgaatcaaaaaagtcaaatgtttcttataaataaga 2523781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 423
Target Start/End: Original strand, 2610195 - 2610293
Alignment:
Q  325 cggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaat 423  Q
    |||||| ||||| || ||| | |||| |||||||||||| ||||||||||||||||| | |||| ||||||||| |||||||| | |||| ||||||||    
T  2610195 cggtccgatttataagaaaaatttgattttttaaattcattgagtaattgatgtatttggtctagaatatagactaaatacatcatttatgcaatgaat 2610293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 469
Target Start/End: Original strand, 6838417 - 6838527
Alignment:
Q  359 attcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagatagg 458  Q
    ||||| ||||||||| ||||||    |||| |||||||||||||||||| | |||| |||||||||||| ||||||||| ||||||| ||| ||||| ||    
T  6838417 attcattgagtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataagatcgg 6838516  T
Q  459 agggagtatta 469  Q
    |  ||||||||    
T  6838517 aatgagtatta 6838527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 313 - 445
Target Start/End: Original strand, 16861508 - 16861638
Alignment:
Q  313 aactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaatt 412  Q
    |||||||| ||||||||  || || |||||| ||||||||||||| ||||| ||| ||||||||||||    ||||||| |||| ||  |||||||||||    
T  16861508 aactactctcttcggtcttatatataaaaaacaattgactttttagattcattgaataattgatgtatatagtctaaaa-atagcccggatacattaatt 16861606  T
Q  413 attcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||| || ||||||| | |||||||    
T  16861607 attcaatgaatccaa-aagtcaattgtttctta 16861638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 321 - 445
Target Start/End: Original strand, 29365625 - 29365749
Alignment:
Q  321 ccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatg 420  Q
    |||||||||| ||||| || ||| | |||||||||| ||| || ||  ||| ||||||||| |||||| | | || ||||||||||||||||| ||||||    
T  29365625 ccttcggtcctatttataagaaacatttgacttttttaatacattgcataaatgatgtatttgatctatattctataccaaatacattaattactcaatg 29365724  T
Q  421 aatcaaataagtcaaatatttctta 445  Q
    |||| || ||||||| | |||||||    
T  29365725 aatctaaaaagtcaattttttctta 29365749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 345 - 445
Target Start/End: Complemental strand, 29365741 - 29365641
Alignment:
Q  345 aattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctt 444  Q
    ||||||||||||| ||||| ||||||||| ||||||| | | || |||||||| ||||||||| | |||| ||||| || ||| ||||||||| ||||||    
T  29365741 aattgactttttagattcattgagtaattaatgtatttggtatagaatatagatcaaatacatcatttatgcaatgtattaaaaaagtcaaatgtttctt 29365642  T
Q  445 a 445  Q
    |    
T  29365641 a 29365641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 352 - 472
Target Start/End: Original strand, 41850631 - 41850751
Alignment:
Q  352 tttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaaca 451  Q
    |||||| ||||| ||| ||||| ||||||| | | ||||||||||| ||||||||| | |||| |||||||||||| |||| |||| ||||||| ||| |    
T  41850631 tttttagattcattgaataattaatgtatttggtataaaatatagagcaaatacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaata 41850730  T
Q  452 agataggagggagtattattt 472  Q
     ||  ||| ||||||||||||    
T  41850731 ggaccggatggagtattattt 41850751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 455
Target Start/End: Complemental strand, 2400079 - 2399962
Alignment:
Q  338 aaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaat 437  Q
    |||||||  |||||||||||  |||  ||| ||||||||||||    |||||||||||||  |||||||| | |||| |||||||||||| |||||||||    
T  2400079 aaaaaatgtttgactttttaggttcgttgaataattgatgtatctagtctaaaatatagattaaatacatcatttatacaatgaatcaaaaaagtcaaat 2399980  T
Q  438 atttcttagaaacaagat 455  Q
     ||||||| ||| |||||    
T  2399979 gtttcttataaataagat 2399962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 45441568 - 45441459
Alignment:
Q  333 tttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagt 432  Q
    |||| |||||| |||| |||||||| ||||||||| |||||| |||||    |||| |||||||| ||||||||| |  ||| |||| ||||||| ||||    
T  45441568 tttataaaaaaaaattaactttttagattcaatgaataattggtgtatcttgtctagaatatagatcaaatacatcatctatacaataaatcaaaaaagt 45441469  T
Q  433 caaatatttc 442  Q
    ||||||||||    
T  45441468 caaatatttc 45441459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 472
Target Start/End: Original strand, 48838347 - 48838467
Alignment:
Q  352 tttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaaca 451  Q
    |||||| ||||| |||| |||| ||||||| | | ||||||||||||||||||||| | ||||  ||||||| ||| |||| |||| ||||||| ||| |    
T  48838347 tttttagattcattgagcaattaatgtatttggtataaaatatagaccaaatacatcatttatgtaatgaattaaaaaagttaaatgtttcttataaaaa 48838446  T
Q  452 agataggagggagtattattt 472  Q
    ||| ||||  |||||| ||||    
T  48838447 agacaggaaagagtatcattt 48838467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 347 - 454
Target Start/End: Original strand, 30823739 - 30823846
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttag 446  Q
    ||||||||||| ||||| |||| |||| ||||||| | | || |||||||||||||||||||| ||||  ||||||| ||| |  |||||||||| |||     
T  30823739 ttgactttttagattcattgagaaattaatgtatttggtatagaatatagaccaaatacattatttatataatgaataaaaaatatcaaatattttttat 30823838  T
Q  447 aaacaaga 454  Q
    ||| ||||    
T  30823839 aaataaga 30823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 468
Target Start/End: Complemental strand, 32811450 - 32811375
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtatt 468  Q
    ||||||||||||||| ||||||||||||||||||| |||| || | ||||||| | | | ||| ||||||||||||    
T  32811450 atagaccaaatacatcaattattcaatgaatcaaaaaagtaaattgtttcttatatataggatcggagggagtatt 32811375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 437
Target Start/End: Complemental strand, 40142847 - 40142801
Alignment:
Q  391 atatagaccaaatacattaattattcaatgaatcaaataagtcaaat 437  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||||    
T  40142847 atatagaccaaatacattatttatgcaatgaatcaaaaaagtcaaat 40142801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 32811858 - 32811730
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||||||||||||| ||||| || ||| |||| | |||||| ||||| |||||||||||| |||  | | || ||||| |||||||||||| | ||||     
T  32811858 tactcccttcggtccaatttataagaaaaaattaattttttagattcattgagtaattgatttatatggtatagaatatggaccaaatacatcatttatg 32811759  T
Q  416 caatgaatcaaataagtcaaatatttctta 445  Q
     ||| ||| ||| |||||||||||| ||||    
T  32811758 gaattaat-aaaaaagtcaaatattgctta 32811730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 419
Target Start/End: Original strand, 40362003 - 40362072
Alignment:
Q  350 actttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaat 419  Q
    |||||||| ||||| ||| ||||||||||||| ||| || | | |||||||||||||||||| |||||||    
T  40362003 actttttagattcattgaataattgatgtatttgatttatattgtagaccaaatacattaatcattcaat 40362072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 2680938 - 2680878
Alignment:
Q  385 tctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||| |||||||| ||||||||| | ||||  ||||||||||| |||||||||||||||||    
T  2680938 tctagaatatagatcaaatacatcatttatataatgaatcaaaaaagtcaaatatttctta 2680878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 423
Target Start/End: Complemental strand, 34118057 - 34117981
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaat 423  Q
    ||||||||||||||||| || |||||| ||||||    |||| |||||||||||||||||| | |||| ||||||||    
T  34118057 ttgactttttaaattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaat 34117981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 380
Target Start/End: Complemental strand, 41863730 - 41863666
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtat 380  Q
    ||||||||||||| | ||||| || ||| ||||||||||||||||||| || |||||| ||||||    
T  41863730 tactcccttcggttctatttataagaaaaaattgactttttaaattcattgtgtaattaatgtat 41863666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 445
Target Start/End: Complemental strand, 7456537 - 7456439
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtat-tcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||| ||||| ||||||||| |||||| | | | |||| ||||||| | |||||| | |||| ||||||||| || |||||||||||||||||    
T  7456537 ttgactttttagattcattgagtaattaatgtatcttgttgtaaa-tatagactagatacatcatttatacaatgaatctaaaaagtcaaatatttctta 7456439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 10462408 - 10462483
Alignment:
Q  348 tgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaat 423  Q
    |||||||||| ||||| ||||| ||||||||||    ||||||||||| ||||||||||| | |||| ||||||||    
T  10462408 tgactttttagattcattgagtgattgatgtatcttgtctaaaatatataccaaatacatcatttatgcaatgaat 10462483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 467
Target Start/End: Complemental strand, 23871044 - 23870977
Alignment:
Q  400 aaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtat 467  Q
    |||||||| |||||||||||| ||| || || |||||| ||||||| ||| ||||| |||||||||||    
T  23871044 aaatacataaattattcaatgtatcgaaaaaatcaaatttttcttataaataagatcggagggagtat 23870977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 423
Target Start/End: Complemental strand, 1709921 - 1709867
Alignment:
Q  369 taattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaat 423  Q
    ||||| ||||||| |||||  |||||||| ||||||||||||||||| |||||||    
T  1709921 taattaatgtatttgatctctaatatagatcaaatacattaattatttaatgaat 1709867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 471
Target Start/End: Original strand, 4826837 - 4826915
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtattatt 471  Q
    ||||||||||||||| || |||||||||||||||| |||| || | ||||||| | | | ||  |||||||||||||||    
T  4826837 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtattatt 4826915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 347 - 469
Target Start/End: Complemental strand, 9979918 - 9979797
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttag 446  Q
    ||||||||||| ||| | ||||||||| ||||||    |||| ||||| ||| |||||||| | ||||  ||| |||||||  ||||||||||||||||     
T  9979918 ttgactttttagatttattgagtaattcatgtatcttgtctagaatattgactaaatacatcatttatg-aataaatcaaaatagtcaaatatttcttat 9979820  T
Q  447 aaacaagataggagggagtatta 469  Q
    ||| ||||| ||||| |||||||    
T  9979819 aaataagatcggaggaagtatta 9979797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 445
Target Start/End: Complemental strand, 28020126 - 28020021
Alignment:
Q  339 aaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaata 438  Q
    ||||| |||||| |||||| ||||| | | |||||| |||||  || ||| || ||||||||||||||| || |||||||||||||||| |||| || |     
T  28020126 aaaaaaaattgattttttagattcattaaataattgttgtatctgacctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattg 28020028  T
Q  439 tttctta 445  Q
    |||||||    
T  28020027 tttctta 28020021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 466
Target Start/End: Original strand, 36245375 - 36245525
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| ||||||  |||| || ||| | ||||||||||  ||||| ||  ||| ||||||||| | |||| | | ||||| | |||||| ||||| |    
T  36245375 tactccctccggtcctgtttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattact 36245474  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagta 466  Q
    ||||||||| || ||||||| | ||||||| ||| | || |||||||||||    
T  36245475 caatgaatctaaaaagtcaattttttcttataaataggacaggagggagta 36245525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 441
Target Start/End: Complemental strand, 47942986 - 47942861
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| || ||| ||||| || ||||  ||||||||||||||| | | | ||||| |||||||   ||||||||||| |  ||||| |||| | ||     
T  47942986 tactccctccgttcctatttataagaaatttttgactttttaaatttattaaataattaatgtattttgtctaaaatataaattaaatatattattcata 47942887  T
Q  416 caatgaatcaaataagtcaaatattt 441  Q
    |||||||||||| |||| ||||||||    
T  47942886 caatgaatcaaaaaagtgaaatattt 47942861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 441
Target Start/End: Complemental strand, 47948416 - 47948291
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| || ||| ||||| || ||||  ||||||||||||||| | | | ||||| |||||||   ||||||||||| |  ||||| |||| | ||     
T  47948416 tactccctccgttcctatttataagaaatttttgactttttaaatttattaaataattaatgtattttgtctaaaatataaattaaatatattattcata 47948317  T
Q  416 caatgaatcaaataagtcaaatattt 441  Q
    |||||||||||| |||| ||||||||    
T  47948316 caatgaatcaaaaaagtgaaatattt 47948291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 1366667 - 1366615
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  1366667 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 1366615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 469
Target Start/End: Complemental strand, 10007725 - 10007570
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| ||||| || ||| | ||||||||||| ||||| ||  ||||| ||||||    | || |||||||||||||||||| | ||||     
T  10007725 tactccctccggtcctatttataagaaaaagttgactttttagattcattgtataattaatgtatcttgtgtagaatatagaccaaatacataatttatg 10007626  T
Q  416 caatgaat--caaataagtcaaatatttcttagaaacaagataggagggagtatta 469  Q
     |||||||   ||| ||||||||| ||| ||| ||| | || ||||||||||||||    
T  10007625 aaatgaataaaaaaaaagtcaaatgtttattataaataggacaggagggagtatta 10007570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 27231906 - 27231854
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  27231906 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 27231854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 29559520 - 29559564
Alignment:
Q  400 aaatacattaattattcaatgaatcaaataagtcaaatatttctt 444  Q
    ||||||||||||||||||||||||| || ||||||| | ||||||    
T  29559520 aaatacattaattattcaatgaatctaaaaagtcaattgtttctt 29559564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 31227568 - 31227620
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  31227568 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 31227620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 41088917 - 41088873
Alignment:
Q  400 aaatacattaattattcaatgaatcaaataagtcaaatatttctt 444  Q
    ||||||||||||||||||||||||| || ||||||| | ||||||    
T  41088917 aaatacattaattattcaatgaatctaaaaagtcaattgtttctt 41088873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 424
Target Start/End: Complemental strand, 41850745 - 41850637
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||| | |||||| ||||| || ||| | || |||||||  ||||| ||  ||| ||||||||| | |||| | | || |||||||||||||||||||    
T  41850745 tactccatccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttgctctatattttataccaaatacattaattatt 41850646  T
Q  416 caatgaatc 424  Q
    |||||||||    
T  41850645 caatgaatc 41850637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 316 - 444
Target Start/End: Complemental strand, 9152528 - 9152400
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||  |||||||| ||| ||||||||||||| ||||| ||||||||||||||||    ||||||||||||||||||||||| |||||||    
T  9152528 tactccctccggtcttatttacaagaaacaattgactttttagattcattgagtaattgatgtatctagtctaaaatatagaccaaatacatcaattatt 9152429  T
Q  416 caatgaatcaaataagtcaaatatttctt 444  Q
     ||||| ||||| ||||||||| ||||||    
T  9152428 taatgactcaaaaaagtcaaatgtttctt 9152400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 41153260 - 41153131
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| || ||| ||||| || ||| | ||||||||||| ||||| ||||||||||||||||| | | || |||||||||||||||||| | ||||     
T  41153260 tactccctccgatcctatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtttataatatagaccaaatacatcatttatg 41153161  T
Q  416 caatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||| ||||||||| |||||||    
T  41153160 caatgaatcaaaaaagtcaaatgtttctta 41153131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 467
Target Start/End: Complemental strand, 43714123 - 43713972
Alignment:
Q  315 ctactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattat 414  Q
    ||||||||| |||||| ||||| || ||||  ||||||||||| ||| | ||||||||||||||||    ||| ||||||||||||||||||| | ||||    
T  43714123 ctactccctccggtcctatttataagaaatttttgactttttagatttactgagtaattgatgtatcttgtct-aaatatagaccaaatacataatttat 43714025  T
Q  415 tcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtat 467  Q
    ||||||||||||| || |||| | ||||||| ||| ||||  |||||||||||    
T  43714024 tcaatgaatcaaaaaaatcaattgtttcttataaataagagcggagggagtat 43713972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 347 - 445
Target Start/End: Original strand, 12962735 - 12962833
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||| ||||| ||||||||| ||||| | | | ||||||||||||||||||||| | |||| |||||||||||| ||||||||| |||||||    
T  12962735 ttgactttttagattcattgagtaattaatgtacttggtataaaatatagaccaaatacatcatttatgcaatgaatcaaaaaagtcaaatgtttctta 12962833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 445
Target Start/End: Complemental strand, 11030325 - 11030212
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    ||||| || ||| |||| |||||||| ||||| ||||||||||||||||  ||| || |||||||||||||||||| | ||||  ||||||||||| |||    
T  11030325 atttataagaaaaaattaactttttagattcattgagtaattgatgtatctgatatagaatatagaccaaatacatcatttatgtaatgaatcaaaaaag 11030226  T
Q  432 tcaaatatttctta 445  Q
    |||||| |||||||    
T  11030225 tcaaatgtttctta 11030212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 454
Target Start/End: Complemental strand, 7943589 - 7943450
Alignment:
Q  316 tactcccttcggtcccatttacaa-aaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattat 414  Q
    |||||||| |||||| ||||| || |||| ||||||||||||| ||||| ||| ||||||||||||    |||| ||||||||||||||| || | ||||    
T  7943589 tactccctccggtcctatttataagaaaaaaattgactttttagattcattgaataattgatgtatcttgtctacaatatagaccaaatatatcatttat 7943490  T
Q  415 tcaatgaatcaaataagtcaaatatttcttagaaacaaga 454  Q
     |||||||| ||| ||||||||||| ||||| ||| ||||    
T  7943489 gcaatgaataaaaaaagtcaaatatctcttataaataaga 7943450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 445
Target Start/End: Complemental strand, 30758869 - 30758740
Alignment:
Q  315 ctactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattat 414  Q
    |||||||||| ||||| ||||| || ||| | ||||||||||| ||| | ||||||||||||||||    |||||| |||||||||||||||  | ||||    
T  30758869 ctactccctttggtcctatttataagaaaaatttgactttttagatt-attgagtaattgatgtatcttgtctaaagtatagaccaaatacaccatttat 30758771  T
Q  415 tcaatgaatcaaataagtcaaatatttctta 445  Q
     |||||||| ||| |||||||||||||||||    
T  30758770 gcaatgaataaaaaaagtcaaatatttctta 30758740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 347 - 445
Target Start/End: Complemental strand, 32457331 - 32457233
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||| ||||| | ||||||||||||||    |||| ||||||||| |||||||| | |||| |||||||||||| |||||||||||||||||    
T  32457331 ttgactttttagattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatcaaaaaagtcaaatatttctta 32457233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 315 - 463
Target Start/End: Complemental strand, 35728615 - 35728466
Alignment:
Q  315 ctactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattat 414  Q
    ||||||||||| || | ||||| |||||| | ||| ||||||||||||| ||| ||||||||||||    | || ||||||||||||||| || | ||||    
T  35728615 ctactcccttcagttctatttataaaaaaaatttggctttttaaattcattgaataattgatgtatcttgtttagaatatagaccaaatatatcatttat 35728516  T
Q  415 tcaatgaatcaaataag-tcaaatatttcttagaaacaagataggaggga 463  Q
     |||||||||||| ||| |||||||||||||| ||| | |||| ||||||    
T  35728515 gcaatgaatcaaaaaagatcaaatatttcttataaataggatatgaggga 35728466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 444
Target Start/End: Original strand, 12486007 - 12486119
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    |||||||| ||| |||||||||||||  |||| ||| ||||| ||| | |||  ||| |||||||||||||||||| |||||||||||||||| || |||    
T  12486007 atttacaagaaagaattgactttttaggttcattgaataatttatggactcggcctagaatatagaccaaatacatcaattattcaatgaatctaaaaag 12486106  T
Q  432 tcaaatatttctt 444  Q
    |||| | ||||||    
T  12486107 tcaattgtttctt 12486119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 445
Target Start/End: Complemental strand, 38554598 - 38554478
Alignment:
Q  325 cggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    |||||| ||||| || ||| | || |||||||||||||| ||||||||| ||||| | | | || |||||||||||||||||||| ||||  ||||||||    
T  38554598 cggtcctatttataagaaaaagttaactttttaaattcattgagtaattaatgtacttggtatagaatatagaccaaatacattatttatgtaatgaatc 38554499  T
Q  425 aaataagtcaaatatttctta 445  Q
    |||  |||||||| |||||||    
T  38554498 aaaatagtcaaatgtttctta 38554478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 10204959 - 10205054
Alignment:
Q  350 actttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||| ||||| |||| |||||||||||    |||||||||||||| |||||||| | |||| ||||||||||||  ||||||||||||||||    
T  10204959 actttttagattcattgagcaattgatgtatcttgtctaaaatatagactaaatacatcatttatacaatgaatcaaaagagtcaaatatttctta 10205054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 327 - 466
Target Start/End: Complemental strand, 38983137 - 38982998
Alignment:
Q  327 gtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaa 426  Q
    |||| ||||| |||||| | |||| |||||| ||||| || |||||||||||||    |||| ||||||||| |||||||| | |||| |||||||||||    
T  38983137 gtcctatttataaaaaaaagttgattttttagattcattgtgtaattgatgtatcttgtctagaatatagacaaaatacatcatttatgcaatgaatcaa 38983038  T
Q  427 ataagtcaaatatttcttagaaacaagataggagggagta 466  Q
    | ||||||||||||| ||| ||| | ||  ||||||||||    
T  38983037 aaaagtcaaatattttttataaataggaccggagggagta 38982998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 445
Target Start/End: Complemental strand, 28249051 - 28248953
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||| ||||| | | ||||| ||||||| | | || ||||||||| |||||||||| |||| |||| ||||||| |||||||||||||||||    
T  28249051 ttgactttttagattcattaaataattaatgtatttggtatagaatatagactaaatacattatttatgcaattaatcaaaaaagtcaaatatttctta 28248953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 345 - 445
Target Start/End: Complemental strand, 22333645 - 22333545
Alignment:
Q  345 aattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctt 444  Q
    ||||||||||||| ||||| ||||||||| || || | ||| || |||||||| ||||||||||| |||| |||||||||||| ||||  ||| ||||||    
T  22333645 aattgactttttagattcattgagtaattaatatacttgatatataatatagatcaaatacattatttatgcaatgaatcaaaaaagtttaatgtttctt 22333546  T
Q  445 a 445  Q
    |    
T  22333545 a 22333545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 444
Target Start/End: Original strand, 29988907 - 29989019
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    ||||| |||||| |||||| |||||| ||||| || |||||| || ||||   |||| |||||||| ||||||||| | |||| |||||||||||| |||    
T  29988907 atttataaaaaaaaattgattttttatattcattgtgtaattaatatattttgtctagaatatagatcaaatacatcatttatgcaatgaatcaaaaaag 29989006  T
Q  432 tcaaatatttctt 444  Q
    |||||| ||||||    
T  29989007 tcaaatgtttctt 29989019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 455
Target Start/End: Original strand, 5109362 - 5109501
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||| || |||||| ||||| || ||| | || |||||||| ||||| ||||||||| ||||||| | | || ||||||| | |||||||| | ||||     
T  5109362 tactctctccggtcctatttataagaaaaagttaactttttagattcattgagtaattaatgtatttggtatagaatataggctaaatacataatttata 5109461  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagat 455  Q
    |  ||||||||| ||||||||||||||||| ||| |||||    
T  5109462 ctttgaatcaaaaaagtcaaatatttcttataaataagat 5109501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 3837488 - 3837430
Alignment:
Q  387 taaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||||||||||| |||| |||||||||||| || |||||| |||||||    
T  3837488 taaaatatagaccaaatacattatttatgcaatgaatcaaaaaaatcaaatgtttctta 3837430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 347 - 441
Target Start/End: Original strand, 12873753 - 12873847
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatattt 441  Q
    ||||||||||| ||||| | ||||||| ||||||| | | || ||||||||| |||||||| | |||| |||||||||||  |||||||||||||    
T  12873753 ttgactttttagattcattaagtaattaatgtatttggtatagaatatagactaaatacatcatttatgcaatgaatcaataaagtcaaatattt 12873847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 391 - 445
Target Start/End: Original strand, 32487064 - 32487118
Alignment:
Q  391 atatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||||| ||||||    
T  32487064 atatagaccaaatacattatttatgcaatgaatcaaaaaagtcaaatacttctta 32487118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 347 - 445
Target Start/End: Original strand, 33824380 - 33824478
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||||| |||||||||||| |||    ||||||||||| |  ||||| || | |||| |||||||||| | |||||||||||||||||    
T  33824380 ttgactttttaaattcattgagtaattgatatatcttgtctaaaatatatattaaatatatcatttatacaatgaatcagaaaagtcaaatatttctta 33824478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 441
Target Start/End: Complemental strand, 5281275 - 5281202
Alignment:
Q  368 gtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatattt 441  Q
    |||||| ||||||| | | ||||||||||| ||||||||| | |||| |||||||||||| |||||||||||||    
T  5281275 gtaattaatgtatttggtataaaatatagatcaaatacatcatttatgcaatgaatcaaaaaagtcaaatattt 5281202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 444
Target Start/End: Complemental strand, 12486141 - 12486013
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||||||  ||||| |||||||| ||| ||||||||||||| ||||| ||| ||||||||||||| | |||| | | ||| || | | ||| |||||||    
T  12486141 tactccctctggtcctatttacaagaaacaattgactttttagattcattgaataattgatgtatttggtctatattctaggccgagtccataaattatt 12486042  T
Q  416 caatgaatcaaataagtcaaatatttctt 444  Q
    ||||||| | || ||||||| | ||||||    
T  12486041 caatgaacctaaaaagtcaattctttctt 12486013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 468
Target Start/End: Complemental strand, 33274119 - 33273967
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| ||||| |||| |   || |||||||| ||||| | ||||||||||||||    |||||||||||  ||||||| || | ||||     
T  33274119 tactccctccggtccaatttataaaagaacttttactttttagattcattaagtaattgatgtatgttgtctaaaatataagccaaatatatcatttata 33274020  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtatt 468  Q
    |||||||||||| ||||||||  ||||||| ||| |  || ||||||||||||    
T  33274019 caatgaatcaaaaaagtcaaagttttcttataaatagaatcggagggagtatt 33273967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 467
Target Start/End: Original strand, 41153141 - 41153261
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttag 446  Q
    ||||||||||  ||||| ||  ||| ||||||||| | |||| | |||| ||||||||||| ||||| |||||||||| || ||||||| | |||||||     
T  41153141 ttgacttttttgattcattgcataaatgatgtatttggtctatattataaaccaaatacatcaattactcaatgaatctaaaaagtcaactttttcttat 41153240  T
Q  447 aaacaagataggagggagtat 467  Q
    ||| | ||| |||||||||||    
T  41153241 aaataggatcggagggagtat 41153261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 369 - 424
Target Start/End: Original strand, 3037777 - 3037832
Alignment:
Q  369 taattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    |||||||||||| || |||| |||||| ||||||||||| ||||||||||||||||    
T  3037777 taattgatgtatccggtctagaatatacaccaaatacataaattattcaatgaatc 3037832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 316 - 467
Target Start/End: Original strand, 9152378 - 9152529
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| |||||||| ||| | ||||||||||  | ||| | | ||||||||||||| | |||| | | ||||| | |||||| ||||| |    
T  9152378 tactccctccggtcctatttacaagaaacatttgacttttttgagtcattaaataattgatgtatttggtctatattttagactagatacatcaattact 9152477  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtat 467  Q
    ||||||||| || ||||||| | ||||||  ||| ||||  |||||||||||    
T  9152478 caatgaatctaaaaagtcaattgtttcttgtaaataagaccggagggagtat 9152529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 11182292 - 11182193
Alignment:
Q  338 aaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaat 437  Q
    |||||| |||| |||||||||||| | ||||||||||||||||  ||| || |||||  | ||||||||| | ||||  ||||||||||| |||||||||    
T  11182292 aaaaaaaaattaactttttaaatttattgagtaattgatgtatatgatatagaatatgaatcaaatacatcatttatggaatgaatcaaaaaagtcaaat 11182193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 347 - 454
Target Start/End: Original strand, 39118044 - 39118151
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttag 446  Q
    |||| |||||| || || |||||||||||| |||   ||||| |||||||||||||||||| | |||| |||| ||||||| ||||||| ||||| |||     
T  39118044 ttgaatttttagatccattgagtaattgatatatcttatctagaatatagaccaaatacataatttatacaataaatcaaaaaagtcaactattttttat 39118143  T
Q  447 aaacaaga 454  Q
    ||| ||||    
T  39118144 aaataaga 39118151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 444
Target Start/End: Original strand, 43893945 - 43894016
Alignment:
Q  373 tgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctt 444  Q
    |||||||| |||  ||||||||||||||||||||| ||||||||||| |||||||  | ||||||| |||||    
T  43893945 tgatgtatccgacttaaaatatagaccaaatacataaattattcaataaatcaaaacaatcaaataattctt 43894016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 466
Target Start/End: Original strand, 30761377 - 30761527
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||| ||| |||||| ||||| || ||| | ||||||||||| ||||| ||||||||| || |||    |||| ||||||||| ||||||||   || |     
T  30761377 tactacctccggtcctatttataagaaacatttgactttttacattcattgagtaattaatttatcttgtctagaatatagactaaatacatattttgtg 30761476  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagta 466  Q
    |||||||||||| ||||||||| ||||||| ||| | ||  ||||||||||    
T  30761477 caatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagta 30761527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 467
Target Start/End: Complemental strand, 12873856 - 12873721
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    ||||| |||||||| |||||||| |  ||||| ||  ||| |||||||||   |||| | | || ||||||||||||||||| | |||||||| || |||    
T  12873856 atttataaaaaatatttgactttattgattcattgcataaatgatgtatttagtctatattctataccaaatacattaattacttaatgaatctaaaaag 12873757  T
Q  432 tcaaatatttcttagaaacaagataggagggagtat 467  Q
    |||| | ||||||| ||| | ||| |||||||||||    
T  12873756 tcaactttttcttataaaaaggatcggagggagtat 12873721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 445
Target Start/End: Complemental strand, 29169953 - 29169855
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaa-tcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| | |||||||||||| |||| | | || |||||||| ||||||||| | |||  ||||||| | ||| |||||||||||||||||    
T  29169953 ttgactttttaaatttattgagtaattgatatatttg-tttagaatatagatcaaatacatcatttagacaatgaattaaaaaaagtcaaatatttctta 29169855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 423
Target Start/End: Original strand, 32516205 - 32516236
Alignment:
Q  392 tatagaccaaatacattaattattcaatgaat 423  Q
    ||||||||||||||||||||||||||||||||    
T  32516205 tatagaccaaatacattaattattcaatgaat 32516236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 454
Target Start/End: Complemental strand, 12962854 - 12962716
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||||||  ||||| ||||| || ||| | ||||||||||  ||||| ||  ||| ||||||||| | |||| | | || ||||| ||||||||||| |    
T  12962854 tactccctctggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattttataccaagtacattaattact 12962755  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaaga 454  Q
    ||||||||| || ||||||| | ||||||| ||| ||||    
T  12962754 caatgaatctaaaaagtcaactttttcttataaataaga 12962716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 415
Target Start/End: Original strand, 14803085 - 14803131
Alignment:
Q  369 taattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||||||||||| |||||| |||||||| ||||||||| |||||||    
T  14803085 taattgatgtatttgatctataatatagatcaaatacatcaattatt 14803131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 417
Target Start/End: Original strand, 22857822 - 22857904
Alignment:
Q  335 tacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattca 417  Q
    ||||| ||| ||||||||||||| || || ||| ||||| ||||||  |||||| ||| || ||||||||||| |||||||||    
T  22857822 tacaagaaacaattgactttttagatacattgaataatttatgtatctgatctagaatctaaaccaaatacataaattattca 22857904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 315 - 437
Target Start/End: Complemental strand, 34447653 - 34447531
Alignment:
Q  315 ctactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattat 414  Q
    |||||||||  ||||| ||||| || ||| | |||| |||||| ||||| || |||||  ||||||    ||||||||||| ||||||||||||| ||||    
T  34447653 ctactccctctggtcctatttataagaaaaagttgattttttagattcattgtgtaatcaatgtatcttgtctaaaatataaaccaaatacattatttat 34447554  T
Q  415 tcaatgaatcaaataagtcaaat 437  Q
     |||||||  ||| |||||||||    
T  34447553 gcaatgaactaaaaaagtcaaat 34447531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 444
Target Start/End: Original strand, 36881600 - 36881654
Alignment:
Q  390 aatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctt 444  Q
    |||||||||||||| ||||| ||||  ||||||||||| ||||||||| ||||||    
T  36881600 aatatagaccaaattcattatttatgtaatgaatcaaaaaagtcaaatgtttctt 36881654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 444
Target Start/End: Original strand, 37670339 - 37670445
Alignment:
Q  338 aaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaat 437  Q
    |||||| ||||||||||||| ||  | ||| ||||||||| ||   ||||| |||||| |||||||| |||| |||| |||||||| ||| || ||||||    
T  37670339 aaaaaacaattgactttttagatatattgaataattgatgcatcttatctagaatatataccaaatagattatttatgcaatgaattaaaaaaatcaaat 37670438  T
Q  438 atttctt 444  Q
     ||||||    
T  37670439 gtttctt 37670445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 45571025 - 45571157
Alignment:
Q  312 gaactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaat 411  Q
    |||||||| ||| |||||| ||||| || ||| |||| |||||||| ||||| | | |||||||||||      ||| || ||||||||||||||| ||     
T  45571025 gaactactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaac 45571123  T
Q  412 tattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||| |||| || | |||||||    
T  45571124 tattcaatgaatcaaaaaagtaaattgtttctta 45571157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 45574692 - 45574824
Alignment:
Q  312 gaactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaat 411  Q
    |||||||| ||| |||||| ||||| || ||| |||| |||||||| ||||| | | |||||||||||      ||| || ||||||||||||||| ||     
T  45574692 gaactactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaac 45574790  T
Q  412 tattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||| |||| || | |||||||    
T  45574791 tattcaatgaatcaaaaaagtaaattgtttctta 45574824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 45578359 - 45578491
Alignment:
Q  312 gaactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaat 411  Q
    |||||||| ||| |||||| ||||| || ||| |||| |||||||| ||||| | | |||||||||||      ||| || ||||||||||||||| ||     
T  45578359 gaactactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaac 45578457  T
Q  412 tattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||| |||| || | |||||||    
T  45578458 tattcaatgaatcaaaaaagtaaattgtttctta 45578491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 45582026 - 45582158
Alignment:
Q  312 gaactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaat 411  Q
    |||||||| ||| |||||| ||||| || ||| |||| |||||||| ||||| | | |||||||||||      ||| || ||||||||||||||| ||     
T  45582026 gaactactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaac 45582124  T
Q  412 tattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||| |||| || | |||||||    
T  45582125 tattcaatgaatcaaaaaagtaaattgtttctta 45582158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 45585693 - 45585825
Alignment:
Q  312 gaactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaat 411  Q
    |||||||| ||| |||||| ||||| || ||| |||| |||||||| ||||| | | |||||||||||      ||| || ||||||||||||||| ||     
T  45585693 gaactactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaac 45585791  T
Q  412 tattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||| |||| || | |||||||    
T  45585792 tattcaatgaatcaaaaaagtaaattgtttctta 45585825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 45589360 - 45589492
Alignment:
Q  312 gaactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaat 411  Q
    |||||||| ||| |||||| ||||| || ||| |||| |||||||| ||||| | | |||||||||||      ||| || ||||||||||||||| ||     
T  45589360 gaactactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaac 45589458  T
Q  412 tattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||| |||| || | |||||||    
T  45589459 tattcaatgaatcaaaaaagtaaattgtttctta 45589492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 45593027 - 45593159
Alignment:
Q  312 gaactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaat 411  Q
    |||||||| ||| |||||| ||||| || ||| |||| |||||||| ||||| | | |||||||||||      ||| || ||||||||||||||| ||     
T  45593027 gaactactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaac 45593125  T
Q  412 tattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||| |||| || | |||||||    
T  45593126 tattcaatgaatcaaaaaagtaaattgtttctta 45593159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 45596694 - 45596826
Alignment:
Q  312 gaactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaat 411  Q
    |||||||| ||| |||||| ||||| || ||| |||| |||||||| ||||| | | |||||||||||      ||| || ||||||||||||||| ||     
T  45596694 gaactactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaac 45596792  T
Q  412 tattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||| |||| || | |||||||    
T  45596793 tattcaatgaatcaaaaaagtaaattgtttctta 45596826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 45600361 - 45600493
Alignment:
Q  312 gaactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaat 411  Q
    |||||||| ||| |||||| ||||| || ||| |||| |||||||| ||||| | | |||||||||||      ||| || ||||||||||||||| ||     
T  45600361 gaactactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaac 45600459  T
Q  412 tattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||| |||| || | |||||||    
T  45600460 tattcaatgaatcaaaaaagtaaattgtttctta 45600493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 45604028 - 45604160
Alignment:
Q  312 gaactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaat 411  Q
    |||||||| ||| |||||| ||||| || ||| |||| |||||||| ||||| | | |||||||||||      ||| || ||||||||||||||| ||     
T  45604028 gaactactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaac 45604126  T
Q  412 tattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||| |||| || | |||||||    
T  45604127 tattcaatgaatcaaaaaagtaaattgtttctta 45604160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 45607695 - 45607827
Alignment:
Q  312 gaactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaat 411  Q
    |||||||| ||| |||||| ||||| || ||| |||| |||||||| ||||| | | |||||||||||      ||| || ||||||||||||||| ||     
T  45607695 gaactactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaac 45607793  T
Q  412 tattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||| |||| || | |||||||    
T  45607794 tattcaatgaatcaaaaaagtaaattgtttctta 45607827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 45611362 - 45611494
Alignment:
Q  312 gaactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaat 411  Q
    |||||||| ||| |||||| ||||| || ||| |||| |||||||| ||||| | | |||||||||||      ||| || ||||||||||||||| ||     
T  45611362 gaactactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaac 45611460  T
Q  412 tattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||| |||| || | |||||||    
T  45611461 tattcaatgaatcaaaaaagtaaattgtttctta 45611494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 45615029 - 45615161
Alignment:
Q  312 gaactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaat 411  Q
    |||||||| ||| |||||| ||||| || ||| |||| |||||||| ||||| | | |||||||||||      ||| || ||||||||||||||| ||     
T  45615029 gaactactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaac 45615127  T
Q  412 tattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||| |||| || | |||||||    
T  45615128 tattcaatgaatcaaaaaagtaaattgtttctta 45615161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 3838490 - 3838438
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  3838490 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 3838438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 4044647 - 4044595
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  4044647 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 4044595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 424
Target Start/End: Original strand, 7833317 - 7833389
Alignment:
Q  352 tttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    |||||| ||||| ||| ||||||||||||  ||| ||||||||||| || ||||||||| |||| ||| ||||    
T  7833317 tttttagattcattgaataattgatgtatctgatttaaaatatagatcagatacattaactatttaataaatc 7833389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 416
Target Start/End: Complemental strand, 14803146 - 14803082
Alignment:
Q  352 tttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattc 416  Q
    |||||| ||| ||| | ||||||||||||| |||||| | |||||| ||||||||| ||||||||    
T  14803146 tttttagatttaattaataattgatgtatttgatctatattatagatcaaatacatcaattattc 14803082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 15384502 - 15384554
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  15384502 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 15384554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 473
Target Start/End: Original strand, 20555266 - 20555413
Alignment:
Q  325 cggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    |||||| ||||| || ||| |||| | |||||| || || ||| ||||||||||||    |||| |||||||||||||||||||| ||||  |||||||     
T  20555266 cggtcctatttataagaaaaaattaattttttagatacattgaataattgatgtatcttgtctagaatatagaccaaatacattatttatgtaatgaat- 20555364  T
Q  425 aaataagtcaaatatttcttagaaacaagataggagggagtattatttt 473  Q
    ||| |||| |||| |||| || ||| | ||  |||||||||| ||||||    
T  20555365 aaaaaagttaaatgtttcctataaataggaccggagggagtaatatttt 20555413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 25795321 - 25795365
Alignment:
Q  400 aaatacattaattattcaatgaatcaaataagtcaaatatttctt 444  Q
    ||||||||||||||||||||||||| || ||||||| | ||||||    
T  25795321 aaatacattaattattcaatgaatctaaaaagtcaattgtttctt 25795365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 445
Target Start/End: Original strand, 28249013 - 28249061
Alignment:
Q  397 accaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||||||| |||||||| || ||||||| | |||||||    
T  28249013 accaaatacattaattatttaatgaatctaaaaagtcaactttttctta 28249061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 445
Target Start/End: Original strand, 28494772 - 28494832
Alignment:
Q  385 tctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||| ||||||||||||||| || | |||| |||||||||||| || |||||| |||||||    
T  28494772 tctagaatatagaccaaatatatcatttatgcaatgaatcaaaaaaatcaaatgtttctta 28494832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 380
Target Start/End: Complemental strand, 42698197 - 42698149
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtat 380  Q
    ||||| |||||| | ||||||||||| ||||| ||||||||||||||||    
T  42698197 atttataaaaaaaatttgactttttagattcattgagtaattgatgtat 42698149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 45034473 - 45034525
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  45034473 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 45034525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 4e-27; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 316 - 470
Target Start/End: Complemental strand, 7693182 - 7693028
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||| | |||||| ||||| || ||| ||||||||||||| ||||| ||||||||| ||||||| | | |||||||||||| |||||||| | ||||     
T  7693182 tactccttccggtcctatttataagaaaaaattgactttttagattcattgagtaattaatgtatttggtataaaatatagactaaatacatcatttatg 7693083  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtattat 470  Q
    |||||||||||| |||| |||| ||||||| ||| | ||| ||||||||||||||    
T  7693082 caatgaatcaaaaaagtaaaatgtttcttataaataggattggagggagtattat 7693028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 353 - 473
Target Start/End: Original strand, 8793755 - 8793875
Alignment:
Q  353 ttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaa 452  Q
    ||||| ||||| ||||||||||||||||| | |||| ||||||||| |||||||| | |||| |||||||||||| ||||||||||||||||| ||| |     
T  8793755 ttttagattcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaatag 8793854  T
Q  453 gataggagggagtattatttt 473  Q
    ||  |||| ||||||||||||    
T  8793855 gaccggagagagtattatttt 8793875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 466
Target Start/End: Original strand, 3236358 - 3236479
Alignment:
Q  345 aattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctt 444  Q
    ||||||||||||||||||| ||| ||||||||||||    | |||||| |||||||||||||| | |||| |||||||| ||| ||||||||||||||||    
T  3236358 aattgactttttaaattcattgaataattgatgtatctagtttaaaatttagaccaaatacatcatttatacaatgaattaaaaaagtcaaatatttctt 3236457  T
Q  445 agaaacaagataggagggagta 466  Q
    | ||| | ||  ||||||||||    
T  3236458 ataaatatgaccggagggagta 3236479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 468
Target Start/End: Complemental strand, 42123093 - 42122963
Alignment:
Q  338 aaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaat 437  Q
    |||||| ||||||||||||| ||||| ||||||||| ||||||    |||| |||||| ||||||||||| | |||| |||||||||||| ||||||||     
T  42123093 aaaaaaaaattgactttttagattcattgagtaattaatgtatcttgtctagaatatataccaaatacatcatttatgcaatgaatcaaaaaagtcaaac 42122994  T
Q  438 atttcttagaaacaagataggagggagtatt 468  Q
     ||||||| ||| | ||  ||||||||||||    
T  42122993 gtttcttataaataggactggagggagtatt 42122963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 5031463 - 5031592
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||| ||| |||||| ||||| || ||| | || |||||||||||||| | ||||||||||||||    |||| ||||||||| |||||||| | ||||     
T  5031463 tacttcctccggtcctatttataagaaaaatttaactttttaaattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatg 5031562  T
Q  416 caatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||| ||||||||| |||||||    
T  5031563 caatgaatcaaaaaagtcaaatgtttctta 5031592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 440
Target Start/End: Complemental strand, 10184684 - 10184576
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    ||||| || ||| ||| ||||||||| ||||| ||| ||||||||||||  |||| | |||||||||||||||||| | |||| |||||||| ||| |||    
T  10184684 atttataagaaaaaatcgactttttagattcattgaataattgatgtatatgatccagaatatagaccaaatacatcatttatacaatgaataaaaaaag 10184585  T
Q  432 tcaaatatt 440  Q
    |||||||||    
T  10184584 tcaaatatt 10184576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 332 - 427
Target Start/End: Complemental strand, 6354780 - 6354685
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaa 427  Q
    ||||| || |||||||| | |||||| ||||| ||| ||||| |||||||||||||| |||||| | || |||||||||||||||||| |||||||    
T  6354780 atttataagaaataattaattttttagattcattgaataatttatgtattcgatctagaatatatatcatatacattaattattcaataaatcaaa 6354685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 35149817 - 35149688
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||||||||||||| ||||| || ||| | |||| |||||| ||| | || |||||| ||||||    |||| |||||||||||||||||| | ||||     
T  35149817 tactcccttcggtcctatttataagaaaaagttgattttttagatttattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatg 35149718  T
Q  416 caatgaatcaaataagtcaaatatttctta 445  Q
    |||| ||||||| ||||||||| |||||||    
T  35149717 caattaatcaaaaaagtcaaatgtttctta 35149688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 359 - 423
Target Start/End: Original strand, 28872158 - 28872222
Alignment:
Q  359 attcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaat 423  Q
    ||||| |||||| ||||||||| || |||| ||||||||||| ||||||||||||||||||||||    
T  28872158 attcattgagtagttgatgtatccgctctagaatatagaccagatacattaattattcaatgaat 28872222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 432
Target Start/End: Original strand, 34711096 - 34711196
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataag 431  Q
    ||||| |||||| ||||||||||||| ||||| |||||||||||||||||   ||||||||||| || |||||||| | | || |||| ||||||| |||    
T  34711096 atttataaaaaaaaattgactttttagattcattgagtaattgatgtattttgtctaaaatataaactaaatacatcattaatgcaataaatcaaaaaag 34711195  T
Q  432 t 432  Q
    |    
T  34711196 t 34711196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 16448904 - 16448809
Alignment:
Q  350 actttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||| ||||| ||||||||||||||||   || || |||||| |||||||| || | |||| |||||||||||| ||||||||| |||||||    
T  16448904 actttttagattcattgagtaattgatgtatcttatatagaatataaaccaaatatatcatttatgcaatgaatcaaaaaagtcaaatgtttctta 16448809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 10839773 - 10839890
Alignment:
Q  327 gtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaa 426  Q
    |||| ||||| || ||| ||||||||||||| ||||| ||| ||||| ||||| | | | || |||||||||||||||||| | |||| |||||||||||    
T  10839773 gtcctatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatatagaccaaatacatcatttatgcaatgaatcaa 10839872  T
Q  427 ataagtcaaatatttctta 445  Q
    | |||| |||| |||||||    
T  10839873 a-aagttaaatgtttctta 10839890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 29274071 - 29274125
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatt 79  Q
    |||||||||| || ||| ||||||||||||||| |||||||||||||||||||||    
T  29274071 tgaatccatatgagattgaagaggaagaggaaggtgattgcatagccatgagatt 29274125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 347 - 445
Target Start/End: Complemental strand, 40483401 - 40483303
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||| |||| | |||||||||||| |||   ||||| ||||| |||||||||||| | |||| |||||||| ||| |||| ||||||||||||    
T  40483401 ttgactttttcaatttattgagtaattgatatatcttatctagaatatggaccaaatacatcatttatgcaatgaattaaaaaagttaaatatttctta 40483303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 475
Target Start/End: Complemental strand, 3236479 - 3236322
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||  ||||| || ||||| |||||||||| |||||| ||  ||| ||||||||| | |||||| | || || | |||||| |||||||    
T  3236479 tactccctccggtcatatttataagaaatatttgacttttttaattcattgtataaatgatgtatttggtctaaattttaaactagatacatcaattatt 3236380  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtattatttttg 475  Q
    ||||||||  || ||||||| | ||||  | ||| ||||| |||||||||| ||||||||    
T  3236379 caatgaatttaaaaagtcaattttttc--ataaataagatcggagggagtaatatttttg 3236322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 437
Target Start/End: Original strand, 15720207 - 15720319
Alignment:
Q  325 cggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    |||||| ||||| || ||| |||| |||||||| | | |  |||||||||||||||| | | ||||||||||| ||||||||||| ||||  ||||||||    
T  15720207 cggtcctatttataagaaaaaattaactttttagacttatagagtaattgatgtatttgttataaaatatagatcaaatacattatttatggaatgaatc 15720306  T
Q  425 aaataagtcaaat 437  Q
    ||| |||| ||||    
T  15720307 aaaaaagttaaat 15720319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 445
Target Start/End: Complemental strand, 24619070 - 24618978
Alignment:
Q  353 ttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||| ||||| ||||||||| ||||| | | | || |||||||||||||||||| | |||| |||||||||||| ||||||||  |||||||    
T  24619070 ttttagattcattgagtaattaatgtacttgttatagaatatagaccaaatacatcatttatgcaatgaatcaaaaaagtcaaaggtttctta 24618978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 414
Target Start/End: Original strand, 30924731 - 30924800
Alignment:
Q  345 aattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattat 414  Q
    ||||||||||||| ||| | | | ||||||||||||| |||||| ||||||||||||||| |||| ||||    
T  30924731 aattgactttttagatttattaattaattgatgtatttgatctagaatatagaccaaatatattatttat 30924800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 436
Target Start/End: Original strand, 1223122 - 1223242
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||  ||||| || ||| || |||||||||| ||||| || |||||| ||||||    || |||||||||||||||||||| | ||||     
T  1223122 tactccctccggtcatatttataagaaaaaagtgactttttagattcattgtgtaattaatgtatcttgtcaaaaatatagaccaaatacataatttatg 1223221  T
Q  416 caatgaatcaaataagtcaaa 436  Q
    |||||||| |||  |||||||    
T  1223222 caatgaattaaaatagtcaaa 1223242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 424
Target Start/End: Complemental strand, 8793868 - 8793760
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||| || |||||| ||||| || ||||| ||||||||||  ||||| ||  ||| |||||||||   |||| | |||||||||||||||| ||||| |    
T  8793868 tactctctccggtcctatttataagaaatatttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatcaattact 8793769  T
Q  416 caatgaatc 424  Q
    |||||||||    
T  8793768 caatgaatc 8793760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 469
Target Start/End: Original strand, 8803296 - 8803380
Alignment:
Q  385 tctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtatta 469  Q
    |||| |||||||||||||||||| | ||||  ||||||||||| |||| |||||||| ||| ||| | ||| ||||| |||||||    
T  8803296 tctagaatatagaccaaatacatcatttatgtaatgaatcaaaaaagttaaatattttttataaataggatcggaggaagtatta 8803380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 423
Target Start/End: Complemental strand, 13831510 - 13831403
Alignment:
Q  316 tactcccttcggtcccatttacaa-aaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattat 414  Q
    |||||||| | |||| ||||| || |||| ||||||||||||| ||||| | | |||||||||||||   ||||||| ||||||| ||||||| ||||||    
T  13831510 tactccctccagtcctatttataagaaaaaaattgactttttagattcattaaataattgatgtatttagtctaaaa-atagaccgaatacatcaattat 13831412  T
Q  415 tcaatgaat 423  Q
    | |||||||    
T  13831411 ttaatgaat 13831403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 424
Target Start/End: Complemental strand, 289193 - 289154
Alignment:
Q  385 tctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  289193 tctataatatagaccaaatacattaaatattcaatgaatc 289154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 27883212 - 27883141
Alignment:
Q  352 tttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaat 423  Q
    |||||||||||| ||| ||||| |||||| ||||||| | ||||||||| ||  |||||||||| |||||||    
T  27883212 tttttaaattcattgaataattaatgtatccgatctacattatagaccagatgtattaattatttaatgaat 27883141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 28023392 - 28023321
Alignment:
Q  352 tttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaat 423  Q
    |||||||||||| ||| ||||| |||||| ||||||| | ||||||||| ||  |||||||||| |||||||    
T  28023392 tttttaaattcattgaataattaatgtatccgatctacattatagaccagatgtattaattatttaatgaat 28023321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 32597613 - 32597518
Alignment:
Q  350 actttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||| ||||||| ||||||||| |||||   | | |||||||||||| ||||||||   |||  |||||||||||| ||||||||| |||||||    
T  32597613 acttttaaaattcattgagtaattaatgtacgtggtataaaatatagacaaaatacatcgtttacgcaatgaatcaaaaaagtcaaatgtttctta 32597518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 347 - 445
Target Start/End: Complemental strand, 16008641 - 16008543
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||| ||| ||| | |||||| ||||||||||   |||| ||||| |||||||||||||| |||| ||||  || ||| ||||||||| |||||||    
T  16008641 ttgacttcttagatttattgagtacttgatgtattttgtctagaatattgaccaaatacattatttatgcaatagattaaaaaagtcaaatgtttctta 16008543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 424
Target Start/End: Original strand, 9503612 - 9503645
Alignment:
Q  391 atatagaccaaatacattaattattcaatgaatc 424  Q
    |||||||||||||||||||| |||||||||||||    
T  9503612 atatagaccaaatacattaaatattcaatgaatc 9503645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 445
Target Start/End: Original strand, 7693113 - 7693161
Alignment:
Q  397 accaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||||| |||||||||| || ||||||| | |||||||    
T  7693113 accaaatacattaattactcaatgaatctaaaaagtcaattttttctta 7693161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 424
Target Start/End: Complemental strand, 9503513 - 9503481
Alignment:
Q  392 tatagaccaaatacattaattattcaatgaatc 424  Q
    ||||||||||||||||||| |||||||||||||    
T  9503513 tatagaccaaatacattaaatattcaatgaatc 9503481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 10839831 - 10839783
Alignment:
Q  397 accaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||| |||||||||||||||||||||| || ||||||| | |||||||    
T  10839831 accaagtacattaattattcaatgaatctaaaaagtcaattttttctta 10839783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 12958851 - 12958903
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  12958851 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 12958903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 22429610 - 22429662
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  22429610 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 22429662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 422
Target Start/End: Complemental strand, 30112408 - 30112380
Alignment:
Q  394 tagaccaaatacattaattattcaatgaa 422  Q
    |||||||||||||||||||||||||||||    
T  30112408 tagaccaaatacattaattattcaatgaa 30112380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 423
Target Start/End: Original strand, 30114812 - 30114844
Alignment:
Q  391 atatagaccaaatacattaattattcaatgaat 423  Q
    ||||||||||||||||||| |||||||||||||    
T  30114812 atatagaccaaatacattagttattcaatgaat 30114844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 35011287 - 35011339
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  35011287 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 35011339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 44796417 - 44796469
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  44796417 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 44796469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 316 - 469
Target Start/End: Original strand, 26924212 - 26924365
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| ||||| || ||| | ||||||||||||||||| ||||| ||| ||||| | | | || |||||||||||||||||| | |||||    
T  26924212 tactccctccggtcctatttataagaaaaagttgactttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttatt 26924311  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtatta 469  Q
    |||||||||||| ||||||||| ||||||| ||| | ||  |||||||||||||    
T  26924312 caatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtatta 26924365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 347 - 468
Target Start/End: Original strand, 26070854 - 26070975
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttag 446  Q
    ||||||||||| ||||| ||||||||||||||||   ||||| |||||||||||||||||||| |||| |||||||||||| |||| |||| |||||||     
T  26070854 ttgactttttagattcattgagtaattgatgtatcttatctagaatatagaccaaatacattatttatgcaatgaatcaaaaaagtaaaatgtttcttat 26070953  T
Q  447 aaacaagataggagggagtatt 468  Q
    ||| ||||  |||| |||||||    
T  26070954 aaataagaccggagagagtatt 26070975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 26760322 - 26760193
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| ||||| || ||| |||||| |||||||||||| ||||| ||| ||||| | | | || |||||||||||||||||| | |||||    
T  26760322 tactccctccggtcctatttataagaaaaaattgattttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttatt 26760223  T
Q  416 caatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||| ||||||||| |||||||    
T  26760222 caatgaatcaaaaaagtcaaatgtttctta 26760193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 347 - 445
Target Start/End: Original strand, 34332506 - 34332604
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||| ||||| |||||||||||||||||   |||| |||||||||||||||||| | |||| |||||||||||| ||||||||| |||||||    
T  34332506 ttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatccaatgaatcaaaaaagtcaaatgtttctta 34332604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 345 - 445
Target Start/End: Complemental strand, 44939186 - 44939086
Alignment:
Q  345 aattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctt 444  Q
    |||||| |||||| ||||| ||||||||||||||||   ||||| |||||||||||||||||| | |||| |||||||| ||| ||||||||| ||||||    
T  44939186 aattgattttttagattcattgagtaattgatgtatctaatctagaatatagaccaaatacatcatttatacaatgaataaaaaaagtcaaatgtttctt 44939087  T
Q  445 a 445  Q
    |    
T  44939086 a 44939086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 311 - 423
Target Start/End: Complemental strand, 50155452 - 50155340
Alignment:
Q  311 ggaactactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaa 410  Q
    |||| |||| ||| |||||| ||||| || ||| | ||||||||||| ||||| ||||||||||||||||| | |||| |||||||||||||||||| |     
T  50155452 ggaaatacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtctataatatagaccaaatacatcat 50155353  T
Q  411 ttattcaatgaat 423  Q
    |||| ||||||||    
T  50155352 ttatgcaatgaat 50155340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 437
Target Start/End: Complemental strand, 38590192 - 38590094
Alignment:
Q  339 aaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaat 437  Q
    ||||| |||| |||||||| ||||| ||||||||||||||||  | | || |||||||||||||||||||| ||||  ||||||||||| |||||||||    
T  38590192 aaaaaaaattaactttttagattcattgagtaattgatgtatctggtatagaatatagaccaaatacattatttatgaaatgaatcaaaaaagtcaaat 38590094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 468
Target Start/End: Original strand, 15342967 - 15343088
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttag 446  Q
    |||| |||||| ||||| || |||||| ||||||    |||| |||||||||||||||||| | |||| |||||||||||| || ||||||||||||||     
T  15342967 ttgaatttttagattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaaatcaaatatttcttat 15343066  T
Q  447 aaacaagataggagggagtatt 468  Q
    ||| | ||||||| | ||||||    
T  15343067 aaataggataggatgaagtatt 15343088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 38040425 - 38040296
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||| ||| |||||| ||||| || ||| | ||||||||||| ||||| ||| ||||||||||||    |||| |||||||| |||||| || | ||||     
T  38040425 tacttcctccggtcctatttataagaaaaatttgactttttagattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatg 38040326  T
Q  416 caatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||| ||||||||| |||||||    
T  38040325 caatgaatcaaaaaagtcaaatgtttctta 38040296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 466
Target Start/End: Complemental strand, 519948 - 519832
Alignment:
Q  350 actttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaa 449  Q
    |||||||| ||||| ||||||||||||||||   ||||| |||||||| ||||||||| | |||| |||| ||||||| ||||||||| ||| ||| |||    
T  519948 actttttagattcattgagtaattgatgtatcttatctagaatatagatcaaatacatcatttatacaataaatcaaaaaagtcaaatgtttattataaa 519849  T
Q  450 caagataggagggagta 466  Q
     | ||  ||||||||||    
T  519848 taggaccggagggagta 519832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 445
Target Start/End: Complemental strand, 38738071 - 38737951
Alignment:
Q  325 cggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    |||||| ||||| || ||| | || |||||||| ||||| ||||||||||||||||    |||| |||||| |||||||||||   |||| |||||||||    
T  38738071 cggtcctatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttgtctagaatataaaccaaatacatcctttatgcaatgaatc 38737972  T
Q  425 aaataagtcaaatatttctta 445  Q
    ||| ||||||||| |||||||    
T  38737971 aaaaaagtcaaatgtttctta 38737951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 423
Target Start/End: Original strand, 640537 - 640627
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaat 423  Q
    ||||| || ||| ||||||||||||| ||||| ||||||||||||||||   ||||||||||||||| |||||||| | |||| ||||||||    
T  640537 atttataagaaaaaattgactttttagattca-tgagtaattgatgtatcttatctaaaatatagactaaatacataatttatacaatgaat 640627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 444
Target Start/End: Original strand, 49944841 - 49944960
Alignment:
Q  325 cggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    |||||| ||||| || ||| | || |||||||| ||||| ||| ||||||||||||    |||| |||||||||||||||||| | |||| |||||||||    
T  49944841 cggtcctatttataagaaaaatttaactttttagattcattgaataattgatgtatcttgtctagaatatagaccaaatacatcatttatacaatgaatc 49944940  T
Q  425 aaataagtcaaatatttctt 444  Q
    ||| || |||||| ||||||    
T  49944941 aaaaaaatcaaatgtttctt 49944960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 359 - 445
Target Start/End: Original strand, 8971270 - 8971356
Alignment:
Q  359 attcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||| ||||||||| ||||||| ||  || |||||||| |||| || ||| |||| |||||||||||| |||||||||||||||||    
T  8971270 attcattgagtaattaatgtatttgacatagaatatagatcaaacacgttatttatgcaatgaatcaaaaaagtcaaatatttctta 8971356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 38040275 - 38040404
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||||||||||||| ||||| || ||| | ||||||||||  ||||| ||  ||| |||| |||| |||||| | | ||||| | |||||| ||||| |    
T  38040275 tactcccttcggtcctatttataagaaacatttgacttttttgattcattgcataaatgatatatttgatctatattctagacaagatacatcaattaat 38040374  T
Q  416 caatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||| || ||||||||| |||||||    
T  38040375 caatgaatctaaaaagtcaaatttttctta 38040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 473
Target Start/End: Complemental strand, 39748696 - 39748611
Alignment:
Q  388 aaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtattatttt 473  Q
    |||||||| || |||||||| | |||| |||||||| ||| ||||||||||||||||| ||| |||||  ||||||||| ||||||    
T  39748696 aaaatatatacaaaatacatcatttatgcaatgaattaaaaaagtcaaatatttcttataaataagatctgagggagtagtatttt 39748611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 316 - 427
Target Start/End: Complemental strand, 29256747 - 29256637
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||| ||| |||||| ||||| || ||| | ||||||||||| ||||| ||||||||| |||| || | | ||||||| ||||||||||||| | ||||     
T  29256747 tacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtttttggtataaaata-agaccaaatacatcatttatg 29256649  T
Q  416 caatgaatcaaa 427  Q
    ||||||||||||    
T  29256648 caatgaatcaaa 29256637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 445
Target Start/End: Original strand, 37178931 - 37179038
Alignment:
Q  338 aaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaat 437  Q
    |||||| |||| | || ||||||||| || |||||| ||||||    |||||||||||||| |||||||| | |||| |||| ||||||| |||||||||    
T  37178931 aaaaaacaattaatttattaaattcattgtgtaattaatgtatcttgtctaaaatatagactaaatacatcatttatacaataaatcaaaaaagtcaaat 37179030  T
Q  438 atttctta 445  Q
     |||||||    
T  37179031 gtttctta 37179038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 268647 - 268697
Alignment:
Q  27 aatccataggaaattaaagaggaagaggaagatgattgcatagccatgaga 77  Q
    |||||||| || ||| ||||||||||||||| |||||||||||||||||||    
T  268647 aatccatatgagattgaagaggaagaggaaggtgattgcatagccatgaga 268697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 445
Target Start/End: Original strand, 11386190 - 11386282
Alignment:
Q  352 tttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||| ||||| ||| |||||||||| |  | |||| ||||||||| |||||||| | |||| |||||||||||| ||||||||| |||||||    
T  11386190 tttttagattcattgaataattgatgtttctggtctagaatatagacgaaatacatcatttatgcaatgaatcaaa-aagtcaaatgtttctta 11386282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 469
Target Start/End: Complemental strand, 26924362 - 26924209
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| ||||| || ||| | ||||||||||  ||||| ||| ||| ||||||||| | |||| | | || ||||| ||||||||| | |    
T  26924362 tactccctccggtcctatttataagaaacatttgacttttttgattcattgaataaatgatgtatttggtctatattctataccaagtacattaatgact 26924263  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtatta 469  Q
    ||||||||  || ||||||| | ||||||| ||| | ||  |||||||||||||    
T  26924262 caatgaatttaaaaagtcaactttttcttataaataggaccggagggagtatta 26924209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 28164644 - 28164733
Alignment:
Q  19 ggtatttgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttg 108  Q
    ||||| ||||||||||||||||| ||||||||||||||   ||| | |||||||||||| |||| ||||  | |||||  ||||||||||    
T  28164644 ggtatgtgaatccataggaaattgaagaggaagaggaatgcgatcgtatagccatgagaattgacagaaattggatgagaaaagagtttg 28164733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 392 - 445
Target Start/End: Complemental strand, 47912890 - 47912837
Alignment:
Q  392 tatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||| ||||||||||| |||| |||| ||||||| |||||||||||||||||    
T  47912890 tatagatcaaatacattatttatacaataaatcaaaaaagtcaaatatttctta 47912837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 445
Target Start/End: Original strand, 50155333 - 50155426
Alignment:
Q  352 tttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||| |||||| ||  ||| ||||||||| | |||| | |||||||||||||||| ||||| |||||||||| || ||||||| | |||||||    
T  50155333 ttttttaattcattgcataaatgatgtatttggtctatattatagaccaaatacatcaattactcaatgaatctaaaaagtcaactttttctta 50155426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 445
Target Start/End: Original strand, 34146860 - 34146932
Alignment:
Q  373 tgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||| ||| || | | |||| ||||||||||||||||||||||||||||| || |||| | |||||||    
T  34146860 tgatgtatttgatatatattctagatcaaatacattaattattcaatgaatcaaaaaaatcaattttttctta 34146932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 445
Target Start/End: Original strand, 6661587 - 6661642
Alignment:
Q  390 aatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||||||||||| | |||| |||| ||||||| ||||||||| |||||||    
T  6661587 aatatagaccaaatacatcatttatgcaattaatcaaaaaagtcaaatgtttctta 6661642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 423
Target Start/End: Complemental strand, 47420020 - 47419949
Alignment:
Q  352 tttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaat 423  Q
    |||||||||||| ||| |||| |||||||  |||||| |||||| |||| |||||||||||||  |||||||    
T  47420020 tttttaaattcattgaataatcgatgtatatgatctataatataaaccatatacattaattatctaatgaat 47419949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 467
Target Start/End: Original strand, 34662757 - 34662831
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtat 467  Q
    ||||||||||||||| || |||||||||||||||| |||| || | ||||||| | | ||||  |||||||||||    
T  34662757 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataagaccggagggagtat 34662831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 415
Target Start/End: Complemental strand, 36141782 - 36141720
Alignment:
Q  353 ttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||||||||| | | ||||| ||||||| |||||| |||| ||||||||||||||| |||||    
T  36141782 ttttaaattcatttaataattaatgtatttgatctataataaagaccaaatacattagttatt 36141720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 423
Target Start/End: Original strand, 28358999 - 28359028
Alignment:
Q  394 tagaccaaatacattaattattcaatgaat 423  Q
    ||||||||||||||||||||||||||||||    
T  28358999 tagaccaaatacattaattattcaatgaat 28359028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 424
Target Start/End: Original strand, 49184249 - 49184346
Alignment:
Q  327 gtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    |||| ||||| ||||||||||| | |||||||||||| | | ||||| ||||||| |||||| ||| || | |||||| || ||||||| ||| ||||    
T  49184249 gtcctatttataaaaaataatttattttttaaattcatttaataattaatgtatttgatctacaatttaaatcaaatatatcaattatttaataaatc 49184346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 418
Target Start/End: Original strand, 10015144 - 10015212
Alignment:
Q  350 actttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaa 418  Q
    ||||||| |||||| ||| ||| |||||||| |  |||||||||||||||| |||||| ||||| ||||    
T  10015144 actttttgaattcattgaataaatgatgtatccagtctaaaatatagaccagatacatcaattactcaa 10015212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 423
Target Start/End: Original strand, 15286039 - 15286115
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaat 423  Q
    |||||||||| |||||| |   ||| ||||||||| |||||| | | || ||||| |||||||||||||||||||||    
T  15286039 ttgacttttttaattcattatataaatgatgtatttgatctatattctataccaagtacattaattattcaatgaat 15286115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 27423048 - 27422992
Alignment:
Q  324 tcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtat 380  Q
    ||||||||||||| |||||  |||||||||||||||| || ||| ||||| ||||||    
T  27423048 tcggtcccatttataaaaatcaattgactttttaaatacattgaataatttatgtat 27422992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 445
Target Start/End: Complemental strand, 49944973 - 49944853
Alignment:
Q  325 cggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    |||||| |||||||| ||| | |||| |||||  ||||| ||  ||| ||||||||| | |||| | | ||||| | |||||| ||||||||||||||||    
T  49944973 cggtcctatttacaagaaacatttgatttttttgattcattgtataaatgatgtatttggtctatattctagacaagatacatcaattattcaatgaatc 49944874  T
Q  425 aaataagtcaaatatttctta 445  Q
     || |||| |||| |||||||    
T  49944873 taaaaagttaaatttttctta 49944853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 218 - 307
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaata 114  Q
    ||||| |||| |||| | |||||||||||| || ||||||||||||||||||| |||||||||  |||||||| ||||||||||||||||    
T  218 tgaatgcatatgaaaatgaagaggaagagggaggtgattgcatagccatgagaattgagagaaattagatgaaaaaagagtttgagaata 307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 398 - 437
Alignment:
Q  149 aaacttcctggccacttgctatagccgtgtggaccaatca 188  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  398 aaacttcttggccacttcctatagccgtgtggaccaatca 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 7411 - 7322
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaata 114  Q
    ||||| |||| |||| | |||||||||||| || ||||||||||||||||||| |||||||||  |||||||| ||||||||||||||||    
T  7411 tgaatgcatatgaaaatgaagaggaagagggaggtgattgcatagccatgagaattgagagaaattagatgaaaaaagagtttgagaata 7322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 7231 - 7192
Alignment:
Q  149 aaacttcctggccacttgctatagccgtgtggaccaatca 188  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  7231 aaacttcttggccacttcctatagccgtgtggaccaatca 7192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 4972 - 5069
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||||||||||||| | ||||||| ||||||| |||||| |||||||| ||| |||||||||  | |||||| ||||||||||||||| ||||||||    
T  4972 tgaatccataggaaaatgaagaggatgaggaaggtgattgtatagccataagaattgagagaaattggatgaaaaaagagtttgagaattcagaatat 5069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 13933 - 14030
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||| || |||||| | ||||||||||||||| | ||||||||||||||| | |||||||||  | |||||| ||||||||||||||| ||||||||    
T  13933 tgaatgcagaggaaaatgaagaggaagaggaaggtaattgcatagccatgataattgagagaaattggatgaaaaaagagtttgagaattcagaatat 14030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 347 - 468
Target Start/End: Original strand, 22101938 - 22102059
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttag 446  Q
    |||| |||||| ||||| || |||||| ||||||    ||||||||||||| ||||||||||| |||| |||| ||||||| |||||||||||||||||     
T  22101938 ttgattttttagattcattgtgtaattaatgtatcttgtctaaaatatagatcaaatacattatttatacaataaatcaaaaaagtcaaatatttcttat 22102037  T
Q  447 aaacaagataggagggagtatt 468  Q
    ||| | ||| ||||||||||||    
T  22102038 aaatatgatcggagggagtatt 22102059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 29299356 - 29299486
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| ||||| || ||| | |||| |||||| ||||| ||||| |||||||||||   ||||||||||||||| ||||||| | ||||     
T  29299356 tactccctccggtcctatttataagaaaaatttgattttttagattcattgagtgattgatgtattttgtctaaaatatagaccgaatacatcatttata 29299455  T
Q  416 caatgaa-tcaaataagtcaaatatttctta 445  Q
    ||||||| ||||| ||||||||| |||||||    
T  29299456 caatgaattcaaaaaagtcaaatgtttctta 29299486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 314 - 467
Target Start/End: Original strand, 38394425 - 38394578
Alignment:
Q  314 actactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaatta 413  Q
    |||||||||| || ||| ||||| || ||| ||||||||||||| ||||| ||| ||||| ||||| | | | || ||| |||||||||||||| | |||    
T  38394425 actactccctccgatcctatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcattta 38394524  T
Q  414 ttcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtat 467  Q
    | |||||||||||| |||| |||| ||||||| ||| | ||| | |||||||||    
T  38394525 tgcaatgaatcaaaaaagtaaaatgtttcttataaataggatcgaagggagtat 38394578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 468
Target Start/End: Complemental strand, 21488380 - 21488280
Alignment:
Q  368 gtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtat 467  Q
    |||||| |||||||   |||| |||||||||||||||||||| |||| |||||||| ||| ||||||||||||||||| ||| | || | ||||||||||    
T  21488380 gtaattaatgtattttgtctagaatatagaccaaatacattatttatgcaatgaattaaaaaagtcaaatatttcttataaataggacatgagggagtat 21488281  T
Q  468 t 468  Q
    |    
T  21488280 t 21488280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 445
Target Start/End: Original strand, 18473505 - 18473603
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||| ||||| ||||||||||||||||    |||| |||||||| ||||| ||| | |||| |||||||||||| ||||||||| |||||||    
T  18473505 ttgactttttagattcattgagtaattgatgtatcttgtctagaatatagatcaaatgcatcatttatacaatgaatcaaaaaagtcaaatgtttctta 18473603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 442
Target Start/End: Complemental strand, 919754 - 919665
Alignment:
Q  353 ttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttc 442  Q
    ||||| ||||| ||||||||||||||||    | || |||||||||||||||||| | ||||| ||||||||||| ||||||||||||||    
T  919754 ttttagattcattgagtaattgatgtatctagtatagaatatagaccaaatacatcatttattgaatgaatcaaaaaagtcaaatatttc 919665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 467
Target Start/End: Original strand, 33478137 - 33478257
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtat-tcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||| |||||| ||||| |||||||||||||||| ||| |||| ||||||| |||||||||| | |||| |||||||||||| | ||||||| |||||||    
T  33478137 ttgaatttttagattcattgagtaattgatgtatctcg-tctagaatataggccaaatacatcatttatgcaatgaatcaaaaatgtcaaatgtttctta 33478235  T
Q  446 gaaacaagataggagggagtat 467  Q
     ||| | ||  |||||||||||    
T  33478236 taaataggaccggagggagtat 33478257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 454
Target Start/End: Complemental strand, 34297294 - 34297185
Alignment:
Q  345 aattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctt 444  Q
    ||||||||||||| ||||| | |||||||||||| |    ||||||||||||| ||| ||||| | |||| |||||||| ||| ||||||||||||||||    
T  34297294 aattgactttttagattcattaagtaattgatgtgtcttgtctaaaatatagatcaattacatcatttatgcaatgaattaaaaaagtcaaatatttctt 34297195  T
Q  445 agaaacaaga 454  Q
    | ||| ||||    
T  34297194 ataaataaga 34297185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 427
Target Start/End: Complemental strand, 14913224 - 14913144
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaa 427  Q
    |||| |||||||||||| ||||||||| || |||| ||| ||||||||||||||||||||||| | |  ||||||||||||    
T  14913224 ttgattttttaaattcattgagtaattaatatatttgatataaaatatagaccaaatacattattcaggcaatgaatcaaa 14913144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 5002255 - 5002160
Alignment:
Q  350 actttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    |||||||| ||| | ||||||||||||||||    ||||||||||||| ||||||||| | |||| |||| ||||||| ||||||||| |||||||    
T  5002255 actttttagatttattgagtaattgatgtatcttgtctaaaatatagatcaaatacatcatttatgcaattaatcaaaaaagtcaaatgtttctta 5002160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 409
Target Start/End: Original strand, 14723407 - 14723478
Alignment:
Q  338 aaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacatta 409  Q
    |||||| |||| |||||||||||||| |||||||||||| |||   ||||| ||||||||||||||||||||    
T  14723407 aaaaaaaaattaactttttaaattcattgagtaattgatatatctaatctagaatatagaccaaatacatta 14723478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 470
Target Start/End: Complemental strand, 13789881 - 13789727
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||| | ||||| || ||| | ||||||||| | ||||| ||| ||||| ||||| | | | || ||| |||||||||||||| | ||||     
T  13789881 tactccctccggttctatttataagaaaaagttgacttttcagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatg 13789782  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtattat 470  Q
    |||||||||||| |||| |||| ||||||| ||| | ||  ||||||||||||||    
T  13789781 caatgaatcaaaaaagtaaaatgtttcttataaataggaccggagggagtattat 13789727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 347 - 445
Target Start/End: Complemental strand, 36286177 - 36286079
Alignment:
Q  347 ttgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||| ||| | ||||||||||||||||    |||| |||||||||||| ||||| | |||| |||||||||||| || |||| |||||||||    
T  36286177 ttgactttttagattaattgagtaattgatgtatcatgtctagaatatagaccaactacatcatttatgcaatgaatcaaaaaaatcaagtatttctta 36286079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 316 - 466
Target Start/End: Complemental strand, 38394577 - 38394427
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    ||||||||||| ||| ||||| || ||| | || |||||||  ||||| ||  ||| ||||||||| | |||| | | || ||||| |||||||||||||    
T  38394577 tactcccttcgatcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttggtctacattctataccaagtacattaattatt 38394478  T
Q  416 caatgaatcaaataagtcaaatatttcttagaaacaagataggagggagta 466  Q
    ||||||||| || ||||||| | ||||||| ||| | ||| ||||||||||    
T  38394477 caatgaatctaaaaagtcaattttttcttataaataggatcggagggagta 38394427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 444
Target Start/End: Original strand, 11931968 - 11932097
Alignment:
Q  316 tactcccttcggtcccatttacaa-aaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattat 414  Q
    |||||||| |||||| ||||| || |||| ||||||||||||| ||||| || |||||| ||||||    ||||||||||||||||||||||| | ||||    
T  11931968 tactccctccggtcctatttataagaaaaaaattgactttttagattcattgtgtaattaatgtatcttgtctaaaatatagaccaaatacatcatttat 11932067  T
Q  415 tcaatgaatcaaataagtcaaatatttctt 444  Q
      ||| ||||||| || | |||| ||||||    
T  11932068 ataataaatcaaaaaaattaaatgtttctt 11932097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 380
Target Start/End: Complemental strand, 35349551 - 35349498
Alignment:
Q  327 gtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtat 380  Q
    |||| ||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  35349551 gtccaatttataaaaaataattgactttttagattcattgagtaattgatgtat 35349498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 332 - 427
Target Start/End: Complemental strand, 32902901 - 32902806
Alignment:
Q  332 atttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaa 427  Q
    ||||| || ||| ||||| ||||||||||||| ||| ||||| || |||||||| || ||||||||| ||||| |||| |||| |||| |||||||    
T  32902901 atttataagaaaaaattgtctttttaaattcattgaataattaatatattcgatatataatatagactaaatatattatttatacaattaatcaaa 32902806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 467
Target Start/End: Original strand, 3814051 - 3814121
Alignment:
Q  397 accaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtat 467  Q
    ||||| |||||||||||||||| ||||| || ||||||| | ||||||| ||||||||  |||||||||||    
T  3814051 accaagtacattaattattcaacgaatctaaaaagtcaattttttcttataaacaagaccggagggagtat 3814121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 442
Target Start/End: Complemental strand, 32452348 - 32452252
Alignment:
Q  345 aattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttc 442  Q
    ||||||||||||| ||||| || |||||| |||||     |||| ||||||||||||||||| || |||| |||||||||||| ||||||||| ||||    
T  32452348 aattgactttttatattcattgcgtaattaatgtagcttgtctagaatatagaccaaatacaatatttatgcaatgaatcaaa-aagtcaaatgtttc 32452252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 1138290 - 1138238
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||||||||||||||| ||||||| |||| || | |||||||    
T  1138290 atagaccaaatacattaattattcaataaatcaaaaaagtaaattgtttctta 1138238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 18391573 - 18391526
Alignment:
Q  390 aatatagaccaaatacattaattattcaatgaatcaaataagtcaaat 437  Q
    |||||||| ||||||||||| |||| |||||||||||| |||||||||    
T  18391573 aatatagatcaaatacattatttatgcaatgaatcaaaaaagtcaaat 18391526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 437
Target Start/End: Complemental strand, 18473626 - 18473503
Alignment:
Q  314 actactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaatta 413  Q
    ||||||||||| ||||| ||||| || ||| | ||||||||||  ||||| ||  ||| ||||| ||| |||||| | | ||||| | |||||| |||||    
T  18473626 actactccctttggtcctatttataagaaacatttgacttttttgattcattgtataaatgatgcatttgatctatattctagacaagatacatcaatta 18473527  T
Q  414 ttcaatgaatcaaataagtcaaat 437  Q
     |||||||||| || |||||||||    
T  18473526 ctcaatgaatctaaaaagtcaaat 18473503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 467
Target Start/End: Complemental strand, 29031109 - 29031035
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtat 467  Q
    ||||||||||||||| || |||||||||||||||| |||| || | ||||||| | | ||||  |||||||||||    
T  29031109 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataagaccggagggagtat 29031035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 13789731 - 13789860
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| ||||| || ||| | || |||||||  ||||| ||  ||| ||||||||| | |||| | | || ||||| |||||||||||||    
T  13789731 tactccctccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttggtctacattctataccaagtacattaattatt 13789830  T
Q  416 caatgaatcaaataagtcaaatatttctta 445  Q
    |||||||||  | ||||||| | |||||||    
T  13789831 caatgaatctgaaaagtcaactttttctta 13789860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 445
Target Start/End: Original strand, 26327559 - 26327663
Alignment:
Q  340 aaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatat 439  Q
    |||| |||| |||||||| ||||| | | |||||||||||    |||||||| ||||||||||||||| || |||||||| ||||||| |||| || | |    
T  26327559 aaaaaaattaactttttagattcattcaataattgatgtacctaatctaaaa-atagaccaaatacatcaactattcaataaatcaaaaaagtaaattct 26327657  T
Q  440 ttctta 445  Q
    ||||||    
T  26327658 ttctta 26327663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 424
Target Start/End: Complemental strand, 892620 - 892588
Alignment:
Q  392 tatagaccaaatacattaattattcaatgaatc 424  Q
    |||||| ||||||||||||||||||||||||||    
T  892620 tatagaacaaatacattaattattcaatgaatc 892588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 1015228 - 1015176
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  1015228 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 1015176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 445
Target Start/End: Original strand, 8235433 - 8235505
Alignment:
Q  373 tgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||| ||| || | ||||||||||||| |||||||||||||| |||| || || |||| | |||||||    
T  8235433 tgatgtatttgatttatattatagaccaaatatattaattattcaataaatctaaaaaatcaattttttctta 8235505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 15968386 - 15968438
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  15968386 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 15968438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 424
Target Start/End: Original strand, 22398120 - 22398148
Alignment:
Q  396 gaccaaatacattaattattcaatgaatc 424  Q
    |||||||||||||||||||||||||||||    
T  22398120 gaccaaatacattaattattcaatgaatc 22398148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 22731331 - 22731279
Alignment:
Q  393 atagaccaaatacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||| || |||||||||||||||| |||| || | |||||||    
T  22731331 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttctta 22731279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 467
Target Start/End: Complemental strand, 29299507 - 29299355
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgacttttta-aattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattat 414  Q
    |||||||| |||||| | ||| || ||| | ||||||||||  |||||| ||  ||| ||||||||||| |||| | | ||||| |||||||| ||| |     
T  29299507 tactccctccggtcctagttataagaaacatttgacttttttgaattcattgtataaatgatgtattcggtctatattttagacaaaatacatcaatcac 29299408  T
Q  415 tcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtat 467  Q
    |||||||||| || || |||||| ||||||| ||| | ||  |||||||||||    
T  29299407 tcaatgaatctaaaaaatcaaatttttcttataaataggaccggagggagtat 29299355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 47; Significance: 1e-17; HSPs: 4)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 3723 - 3820
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatata-gatgaagaaagagtttgagaatacagaatat 122  Q
    ||||||||||||||| | ||||||| ||||||| |||||| |||||||||| | ||||||||| ||| |||||| ||||||||||||||| ||||||||    
T  3723 tgaatccataggaaaatgaagaggatgaggaaggtgattgtatagccatgacaattgagagaa-ataggatgaaaaaagagtttgagaatgcagaatat 3820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 8102 - 8199
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatata-gatgaagaaagagtttgagaatacagaatat 122  Q
    ||||||||| ||| | | ||||||| ||||||| |||||| |||||||||||| ||||||||| ||| |||||| ||||||||||||||| ||||||||    
T  8102 tgaatccatgggagaatgaagaggatgaggaaggtgattgtatagccatgagaattgagagaa-ataggatgaaaaaagagtttgagaatgcagaatat 8199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 14656 - 14752
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatata-gatgaagaaagagtttgagaatacagaatat 122  Q
    ||||||||||||||| | ||| ||| ||||||| |||||| |||||||||||| ||||||||| ||| |||||| ||||||||||||||| ||||||||    
T  14656 tgaatccataggaaaatgaagtggatgaggaaggtgattgtatagccatgagaattgagagaa-ataggatgaa-aaagagtttgagaatgcagaatat 14752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 3898 - 3954
Alignment:
Q  149 aaacttcctggccacttgctatagccgtgt-ggaccaatcacacattaaataacatt 204  Q
    ||||||||||||||||| |||||||||||| |||||||||| ||| |||||| ||||    
T  3898 aaacttcctggccacttcctatagccgtgtgggaccaatcatacaataaatatcatt 3954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 437
Target Start/End: Complemental strand, 16797 - 16679
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| ||||| || ||| ||||||||||  ||||||| ||||||||||||||||    |||| ||||||||||||||||||   ||||     
T  16797 tactccctccggtcctatttataagaaa-aattgacttt--aaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatattttatg 16701  T
Q  416 caatgaatcaaataagtcaaat 437  Q
    |||||||||||| |||||||||    
T  16700 caatgaatcaaaaaagtcaaat 16679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 454
Target Start/End: Original strand, 16562 - 16666
Alignment:
Q  350 actttttaaattcaatgagtaattgatgtat-tcgatctaaaatatagaccaaatacattaattattcaatgaatcaaataagtcaaatatttcttagaa 448  Q
    ||||||| |||||| ||||||||||||| || | || ||| |||||||||||||||||||| |||| |||||||||||| ||||||||  ||||||| ||    
T  16562 acttttttaattcattgagtaattgatgcatcttga-ctagaatatagaccaaatacattatttatacaatgaatcaaaaaagtcaaacgtttcttataa 16660  T
Q  449 acaaga 454  Q
    | ||||    
T  16661 ataaga 16666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 454
Target Start/End: Complemental strand, 28238 - 28098
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||| || || || ||| | ||||||||| ||||| | ||| |||||||| |||    ||||||||||||| ||||||||| | ||||     
T  28238 tactccctccggtcctatatataagaaaaatttgacttttaaaatttattgaataattgatatatcttgtctaaaatatagatcaaatacatcatttatg 28139  T
Q  416 caatgaat--caaataagtcaaatatttcttagaaacaaga 454  Q
    ||||||||  |||| |||| |||||||||||| ||| ||||    
T  28138 caatgaatcacaaaaaagttaaatatttcttataaataaga 28098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 445
Target Start/End: Original strand, 5499 - 5542
Alignment:
Q  402 atacattaattattcaatgaatcaaataagtcaaatatttctta 445  Q
    ||||||||||||||||||||||| || ||||||| |||||||||    
T  5499 atacattaattattcaatgaatctaaaaagtcaattatttctta 5542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 59459 - 59364
Alignment:
Q  25 tgaatccataggaaattaaagaggaagaggaagatgattgcatagccatgagatttgagagaatatagatgaagaaagagtttgagaatacagaatat 122  Q
    ||||| ||||||||| | |||||||| || ||| | ||||||| ||||||||| |||||||||   ||||||   |||||||||||||| ||||||||    
T  59459 tgaatgcataggaaaatgaagaggaatagaaaggtaattgcatggccatgagaattgagagaaataagatgag--aagagtttgagaatgcagaatat 59364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 423375 - 423325
Alignment:
Q  338 aaaaaataattgactttttaaattcaatgagtaattgatgtattcgatcta 388  Q
    |||||| ||||||||||||| ||||| ||| ||||||||||||||| ||||    
T  423375 aaaaaacaattgactttttagattcattgaataattgatgtattcggtcta 423325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 423321 - 423366
Alignment:
Q  390 aatatagaccaaatacattaattattcaatgaatcaaataagtcaa 435  Q
    |||||||||| ||||||| |||||||||||||||| || |||||||    
T  423321 aatatagaccgaatacatcaattattcaatgaatctaaaaagtcaa 423366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 437
Target Start/End: Complemental strand, 1681 - 1561
Alignment:
Q  316 tactcccttcggtcccatttacaaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattatt 415  Q
    |||||||| |||||  ||||| || ||| |||| | |||||| ||||| ||| ||||||||||||| | |||| | |||||| ||||| ||| | ||||     
T  1681 tactccctccggtcttatttataagaaaaaattaattttttagattcattgaataattgatgtattag-tctagagtatagatcaaatgcatcatttatg 1583  T
Q  416 caatgaatcaaataagtcaaat 437  Q
    ||| |||||||| |||||||||    
T  1582 caacgaatcaaaaaagtcaaat 1561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 473
Target Start/End: Original strand, 1616 - 1688
Alignment:
Q  401 aatacattaattattcaatgaatcaaataagtcaaatatttcttagaaacaagataggagggagtattatttt 473  Q
    ||||||| |||||||||||||||| || || | || | ||||||| ||| ||||  |||||||||||||||||    
T  1616 aatacatcaattattcaatgaatctaaaaaattaattttttcttataaataagaccggagggagtattatttt 1688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 427
Target Start/End: Complemental strand, 71976 - 71887
Alignment:
Q  338 aaaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatcaaa 427  Q
    |||||| | |||| || ||||||||| || |||||| |||||||   | |||||||||||| |||||||| | |||| ||||||||||||    
T  71976 aaaaaaaagttgatttattaaattcattgtgtaattaatgtattttgtataaaatatagactaaatacataatttatacaatgaatcaaa 71887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 424
Target Start/End: Complemental strand, 66076 - 65991
Alignment:
Q  339 aaaaataattgactttttaaattcaatgagtaattgatgtattcgatctaaaatatagaccaaatacattaattattcaatgaatc 424  Q
    ||||| |||||  ||||||  |||| ||| ||||| ||||||||| | |||||||||||| | |||||| |||| |||||||||||    
T  66076 aaaaacaattgtttttttaggttcattgaataatttatgtattcggtttaaaatatagactagatacatgaatttttcaatgaatc 65991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 419
Target Start/End: Original strand, 47300 - 47332
Alignment:
Q  387 taaaatatagaccaaatacattaattattcaat 419  Q
    |||||| ||||||||||||||||||||||||||    
T  47300 taaaatgtagaccaaatacattaattattcaat 47332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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