View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17351_high_10 (Length: 384)
Name: NF17351_high_10
Description: NF17351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17351_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 8 - 383
Target Start/End: Original strand, 32688671 - 32689046
Alignment:
| Q |
8 |
gagatgaaagtaaaggtattgcaactgttaacttactgtctcaacaattaaattggctaagcgtccaattgctcatgggagaaccaaacacactgacata |
107 |
Q |
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| T |
32688671 |
gagatgaaagtaaaggtattgcaactgttaacttgctgtctcaacaattaaattggctaagcgtccaattgctcatgggagaaccaaacacactgacata |
32688770 |
T |
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| Q |
108 |
acaacattaggtttcatttgcttaaaagtgaaaactgaaaatcaagaaaatatgaacttggaactgaggagaacgttagttctggtttccgttggatatt |
207 |
Q |
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| T |
32688771 |
acgacatgaggtttcatttgcttaaaagtgaaaactgaaaatcaagaaaatatgaacttggaactgaggagaacgttagttctggtttccgttggatatt |
32688870 |
T |
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| Q |
208 |
tagttatatgtgaaaagtttaaaatcatgaattcccacatcactaactgaagaatataaaattctctctatttaaaccccacctacttacctattaaaac |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32688871 |
tagttatatgtgaaaagtttaaaatcatgaattcccacatcactaactgaagaatataaaattctctctatttaaaccccacctacttacctattaaaac |
32688970 |
T |
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| Q |
308 |
aagcattttctgtatgagttaaccacaaggattttccgtagttatgttacttgagattattcttcgtggagcctgt |
383 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32688971 |
aagcattttctgtatgagttaaccacaaggattttccgtagttatgttacttgagattattcttcgtggagcctgt |
32689046 |
T |
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