View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17351_high_24 (Length: 267)
Name: NF17351_high_24
Description: NF17351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17351_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 32688651 - 32688398
Alignment:
| Q |
1 |
caactatcaagccacaaggcatgcaaggcctcatagtcattgtaacaacatgctcgacctcactttacatttggccactgccataaactatttgtccgat |
100 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
32688651 |
caactatcaagccataaggcatgcaaggcctcatagtcattgtaacaacatgctcgacctcactttacatttggccaccaccataaactatttgtccgat |
32688552 |
T |
|
| Q |
101 |
gcccagaggattttcccacacacaaaagcattatctactgtgttttgctattactttcatgaccaccaccaatctgaatatagcaagcaaacttctgcat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
32688551 |
gcccagaggattttcccacacacaaaagcattatctactgtgttttgctattactttcatgacca-caccaatctgaatatagcaagcaaacttctgcat |
32688453 |
T |
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| Q |
201 |
ttttaggatatataattccaatgttggaagttcccttcttcacatattgaagtat |
255 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32688452 |
ttttaggatatataattccaatgttggaagttcccttcttcacatattgaagtat |
32688398 |
T |
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