View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17351_low_20 (Length: 313)
Name: NF17351_low_20
Description: NF17351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17351_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 19 - 302
Target Start/End: Original strand, 31484533 - 31484817
Alignment:
| Q |
19 |
gttaggagataaccaagatttgtacattgtttggagagaccaatccttacttgtaggattaacac-tttttataggattcttttgatcactctattacat |
117 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
31484533 |
gttaggagataatcaagatttgtacattgtttggagagaccaatccttacttgtaggattaacacctttttataggattcttttgatcactctattacat |
31484632 |
T |
|
| Q |
118 |
agttcaacttgaccgttggtttaagggtgataagcagtaacaactttgtgtataaccctatattcagtcaataagttatctcatatacttcccatacatc |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31484633 |
agttcaacttgaccgttggtttaagggtgataagcagtaacaactctgtgtataaccctatattcagtcaataagttatctcatatacttcccatacatc |
31484732 |
T |
|
| Q |
218 |
gatataaaacaaaatcattttcattatttgttagtctataagtgattatatttactacaagtggttcctttatttatgtccctat |
302 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31484733 |
gatataaaacaaaatcattttcattatttgttagaatataagtgattatatttactacaagtggttcctttatttatgtccctat |
31484817 |
T |
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