View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17351_low_29 (Length: 259)

Name: NF17351_low_29
Description: NF17351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17351_low_29
NF17351_low_29
[»] chr6 (37 HSPs)
chr6 (14-259)||(33342125-33342370)
chr6 (14-259)||(34164761-34165006)
chr6 (14-259)||(34166983-34167228)
chr6 (14-259)||(6027151-6027395)
chr6 (14-259)||(25421208-25421454)
chr6 (14-259)||(16554772-16555017)
chr6 (14-259)||(16631328-16631573)
chr6 (14-259)||(16653015-16653260)
chr6 (25-259)||(27647777-27648008)
chr6 (14-259)||(16578538-16578783)
chr6 (14-259)||(16616597-16616842)
chr6 (82-259)||(13153886-13154063)
chr6 (25-259)||(412016-412250)
chr6 (25-259)||(3072779-3073014)
chr6 (25-259)||(6097471-6097695)
chr6 (25-259)||(2171552-2171792)
chr6 (28-259)||(31404695-31404932)
chr6 (28-259)||(5406220-5406456)
chr6 (28-259)||(5410545-5410781)
chr6 (28-259)||(30834556-30834794)
chr6 (32-259)||(16452349-16452583)
chr6 (109-259)||(5413414-5413561)
chr6 (109-259)||(21588931-21589079)
chr6 (109-259)||(21593664-21593812)
chr6 (109-259)||(2972959-2973107)
chr6 (109-259)||(28137428-28137576)
chr6 (201-259)||(5409089-5409146)
chr6 (28-259)||(16568953-16569170)
chr6 (201-255)||(3808732-3808785)
chr6 (201-259)||(26830143-26830200)
chr6 (109-259)||(17762990-17763138)
chr6 (109-259)||(9183051-9183199)
chr6 (201-255)||(26800679-26800731)
chr6 (109-259)||(33160372-33160521)
chr6 (109-182)||(3038998-3039071)
chr6 (201-259)||(26954306-26954363)
chr6 (201-259)||(33211205-33211262)
[»] chr4 (40 HSPs)
chr4 (14-259)||(5138193-5138438)
chr4 (14-259)||(5135967-5136213)
chr4 (14-257)||(7124804-7125048)
chr4 (14-257)||(7122585-7122829)
chr4 (14-259)||(8395508-8395751)
chr4 (14-259)||(8393299-8393542)
chr4 (41-259)||(31495336-31495556)
chr4 (28-259)||(13992313-13992544)
chr4 (28-259)||(29999826-30000063)
chr4 (41-259)||(56178657-56178882)
chr4 (109-259)||(41639426-41639574)
chr4 (129-255)||(12119559-12119683)
chr4 (109-259)||(48143042-48143191)
chr4 (109-259)||(41964415-41964564)
chr4 (109-259)||(9927478-9927626)
chr4 (201-259)||(8665499-8665556)
chr4 (109-255)||(46703500-46703645)
chr4 (109-259)||(47038431-47038577)
chr4 (201-259)||(50673867-50673924)
chr4 (109-252)||(52095389-52095530)
chr4 (116-256)||(5207865-5208003)
chr4 (123-259)||(5370103-5370237)
chr4 (109-259)||(26364236-26364384)
chr4 (113-255)||(2209717-2209858)
chr4 (201-259)||(6656047-6656104)
chr4 (201-259)||(8648230-8648287)
chr4 (109-259)||(12739570-12739718)
chr4 (211-255)||(379480-379524)
chr4 (109-255)||(12073392-12073536)
chr4 (201-259)||(26175656-26175713)
chr4 (201-259)||(35662532-35662589)
chr4 (201-259)||(48893658-48893715)
chr4 (109-182)||(54200001-54200074)
chr4 (135-255)||(26699466-26699585)
chr4 (164-259)||(4588014-4588107)
chr4 (211-259)||(6542199-6542247)
chr4 (211-259)||(27416985-27417033)
chr4 (197-253)||(33089966-33090021)
chr4 (164-255)||(33989899-33989989)
chr4 (109-259)||(36994524-36994672)
[»] chr8 (27 HSPs)
chr8 (14-259)||(15290427-15290672)
chr8 (14-259)||(15470796-15471041)
chr8 (14-259)||(42575344-42575589)
chr8 (21-259)||(25689865-25690102)
chr8 (25-259)||(3439418-3439651)
chr8 (25-259)||(2627649-2627884)
chr8 (28-259)||(17982563-17982801)
chr8 (28-259)||(34254351-34254586)
chr8 (28-259)||(44303764-44304003)
chr8 (28-259)||(31218167-31218405)
chr8 (109-259)||(42498193-42498342)
chr8 (28-259)||(34256527-34256762)
chr8 (109-259)||(19945379-19945529)
chr8 (128-259)||(1746239-1746366)
chr8 (109-259)||(15212786-15212934)
chr8 (109-259)||(42435011-42435159)
chr8 (200-259)||(1345391-1345449)
chr8 (111-259)||(40321082-40321228)
chr8 (109-259)||(4283524-4283672)
chr8 (109-259)||(33352150-33352298)
chr8 (201-253)||(40328871-40328922)
chr8 (109-259)||(43036423-43036571)
chr8 (109-148)||(8965820-8965859)
chr8 (201-259)||(4743234-4743291)
chr8 (201-259)||(18655491-18655548)
chr8 (211-259)||(10930219-10930267)
chr8 (211-259)||(40221845-40221893)
[»] chr5 (33 HSPs)
chr5 (14-259)||(16546534-16546779)
chr5 (14-259)||(16544312-16544557)
chr5 (14-259)||(40379995-40380239)
chr5 (14-259)||(40382206-40382450)
chr5 (14-259)||(25078023-25078269)
chr5 (14-259)||(25135992-25136238)
chr5 (14-259)||(10593161-10593406)
chr5 (21-259)||(22536310-22536545)
chr5 (25-259)||(29751180-29751414)
chr5 (25-256)||(29722438-29722669)
chr5 (25-259)||(29720278-29720512)
chr5 (25-259)||(9789244-9789478)
chr5 (25-259)||(16409389-16409623)
chr5 (25-259)||(18441668-18441902)
chr5 (25-259)||(26177797-26178030)
chr5 (28-259)||(25412672-25412908)
chr5 (25-259)||(26170688-26170910)
chr5 (28-255)||(13342971-13343204)
chr5 (28-259)||(30182499-30182736)
chr5 (28-259)||(36074063-36074302)
chr5 (109-259)||(40147261-40147409)
chr5 (41-256)||(13239674-13239896)
chr5 (128-259)||(37439161-37439289)
chr5 (109-259)||(213465-213613)
chr5 (109-256)||(13695713-13695859)
chr5 (109-259)||(28278316-28278464)
chr5 (109-259)||(32636824-32636972)
chr5 (211-258)||(16640961-16641008)
chr5 (201-259)||(5058136-5058193)
chr5 (28-259)||(30682942-30683178)
chr5 (201-259)||(28750675-28750732)
chr5 (214-255)||(4160702-4160743)
chr5 (211-259)||(19806463-19806511)
[»] chr3 (52 HSPs)
chr3 (14-259)||(4598543-4598788)
chr3 (14-259)||(10056122-10056367)
chr3 (14-259)||(10058344-10058589)
chr3 (14-259)||(10060566-10060811)
chr3 (14-259)||(10062788-10063033)
chr3 (14-259)||(10065010-10065255)
chr3 (14-259)||(10211298-10211543)
chr3 (14-259)||(4600764-4601009)
chr3 (14-259)||(10209078-10209323)
chr3 (14-259)||(25637331-25637575)
chr3 (14-259)||(3617352-3617598)
chr3 (14-213)||(10067232-10067431)
chr3 (25-259)||(6716414-6716647)
chr3 (25-259)||(54635039-54635272)
chr3 (25-259)||(45282897-45283134)
chr3 (25-259)||(801005-801240)
chr3 (25-143)||(6718598-6718718)
chr3 (74-259)||(7780024-7780208)
chr3 (25-259)||(23200158-23200398)
chr3 (25-259)||(23197959-23198199)
chr3 (28-259)||(5258164-5258402)
chr3 (28-259)||(45095075-45095311)
chr3 (28-259)||(9636146-9636385)
chr3 (28-259)||(5260343-5260581)
chr3 (109-259)||(37408458-37408606)
chr3 (109-259)||(7762265-7762413)
chr3 (112-259)||(19683909-19684054)
chr3 (109-259)||(34491212-34491360)
chr3 (28-259)||(9581193-9581430)
chr3 (112-259)||(39153381-39153526)
chr3 (120-256)||(7764476-7764609)
chr3 (109-259)||(4569952-4570100)
chr3 (201-259)||(6095619-6095676)
chr3 (109-259)||(29196406-29196555)
chr3 (113-259)||(30236129-30236273)
chr3 (201-259)||(54593795-54593852)
chr3 (112-259)||(760850-760995)
chr3 (112-259)||(22835022-22835167)
chr3 (109-259)||(44331545-44331693)
chr3 (109-196)||(51352191-51352278)
chr3 (109-182)||(5236551-5236624)
chr3 (201-259)||(16499120-16499177)
chr3 (201-259)||(29810959-29811016)
chr3 (111-259)||(31314447-31314593)
chr3 (201-259)||(40735474-40735531)
chr3 (201-255)||(43403768-43403821)
chr3 (109-182)||(5433971-5434046)
chr3 (212-256)||(27305733-27305777)
chr3 (211-259)||(46173457-46173505)
chr3 (211-255)||(46860574-46860618)
chr3 (164-259)||(53921523-53921616)
chr3 (211-255)||(55301996-55302040)
[»] chr7 (37 HSPs)
chr7 (14-259)||(6594578-6594822)
chr7 (14-259)||(6592360-6592604)
chr7 (14-259)||(18388780-18389024)
chr7 (14-259)||(18392216-18392460)
chr7 (14-259)||(32060342-32060590)
chr7 (25-259)||(20343811-20344045)
chr7 (25-259)||(24789755-24789989)
chr7 (14-180)||(1562103-1562268)
chr7 (25-259)||(39731283-39731517)
chr7 (25-259)||(43504174-43504409)
chr7 (25-259)||(25766980-25767215)
chr7 (28-259)||(35853825-35854062)
chr7 (187-259)||(1560686-1560757)
chr7 (25-259)||(48408709-48408952)
chr7 (28-259)||(29990965-29991201)
chr7 (109-259)||(34310736-34310884)
chr7 (41-259)||(25615785-25616001)
chr7 (28-259)||(4178685-4178921)
chr7 (109-259)||(23555039-23555188)
chr7 (109-259)||(48491579-48491727)
chr7 (109-259)||(22269973-22270121)
chr7 (201-259)||(32358074-32358131)
chr7 (109-259)||(14069853-14070001)
chr7 (109-259)||(14379881-14380029)
chr7 (109-259)||(41317454-41317602)
chr7 (211-259)||(3259095-3259143)
chr7 (164-259)||(19502233-19502326)
chr7 (109-259)||(29608737-29608885)
chr7 (109-259)||(30024752-30024900)
chr7 (201-255)||(8359340-8359393)
chr7 (214-259)||(2390385-2390430)
chr7 (109-256)||(4253551-4253697)
chr7 (211-259)||(6432071-6432119)
chr7 (109-259)||(8153342-8153490)
chr7 (109-182)||(23343975-23344048)
chr7 (109-259)||(48599354-48599502)
chr7 (128-259)||(41649031-41649158)
[»] scaffold0674 (1 HSPs)
scaffold0674 (14-259)||(3746-3990)
[»] scaffold0565 (1 HSPs)
scaffold0565 (14-259)||(2624-2868)
[»] chr2 (27 HSPs)
chr2 (14-259)||(12647406-12647650)
chr2 (25-259)||(6266605-6266839)
chr2 (88-259)||(13656052-13656221)
chr2 (25-259)||(32289479-32289712)
chr2 (25-259)||(4484350-4484592)
chr2 (25-259)||(30833252-30833494)
chr2 (28-259)||(45099665-45099902)
chr2 (28-259)||(4503153-4503390)
chr2 (28-259)||(36205685-36205921)
chr2 (28-259)||(5723276-5723512)
chr2 (114-255)||(33648176-33648316)
chr2 (109-259)||(2334438-2334586)
chr2 (109-259)||(45726929-45727077)
chr2 (41-259)||(34139790-34140017)
chr2 (128-259)||(6595026-6595154)
chr2 (201-259)||(36988096-36988153)
chr2 (109-259)||(29867869-29868017)
chr2 (164-259)||(14633845-14633939)
chr2 (28-259)||(42362262-42362500)
chr2 (201-259)||(1631752-1631809)
chr2 (109-255)||(24398055-24398202)
chr2 (201-259)||(35446904-35446961)
chr2 (127-259)||(723764-723893)
chr2 (109-183)||(13121769-13121843)
chr2 (201-259)||(17057389-17057446)
chr2 (201-259)||(17085372-17085429)
chr2 (211-259)||(39284936-39284984)
[»] chr1 (37 HSPs)
chr1 (14-259)||(44203536-44203780)
chr1 (14-259)||(9036320-9036564)
chr1 (25-259)||(40282291-40282525)
chr1 (25-259)||(21053872-21054106)
chr1 (25-259)||(9987116-9987349)
chr1 (25-259)||(20622257-20622492)
chr1 (108-259)||(13316372-13316521)
chr1 (25-259)||(51765302-51765545)
chr1 (109-259)||(37168297-37168446)
chr1 (112-259)||(8550807-8550952)
chr1 (28-259)||(20762582-20762820)
chr1 (109-259)||(3189330-3189478)
chr1 (109-259)||(3198147-3198295)
chr1 (109-259)||(3206986-3207134)
chr1 (109-259)||(13547109-13547257)
chr1 (109-259)||(29136247-29136395)
chr1 (109-259)||(44455160-44455308)
chr1 (109-259)||(7482250-7482399)
chr1 (201-259)||(11348789-11348846)
chr1 (201-259)||(13549020-13549077)
chr1 (109-259)||(28220246-28220394)
chr1 (109-255)||(47255364-47255508)
chr1 (201-259)||(31925727-31925784)
chr1 (112-259)||(834187-834332)
chr1 (128-181)||(6378603-6378655)
chr1 (164-259)||(4552657-4552750)
chr1 (164-255)||(22079371-22079461)
chr1 (128-259)||(28265574-28265702)
chr1 (164-251)||(5459961-5460046)
chr1 (201-255)||(28242396-28242448)
chr1 (201-259)||(13659356-13659413)
chr1 (201-259)||(23555286-23555342)
chr1 (201-259)||(34603668-34603725)
chr1 (201-255)||(42297999-42298052)
chr1 (201-259)||(46065009-46065066)
chr1 (109-255)||(47115171-47115316)
chr1 (211-259)||(193711-193759)
[»] scaffold0137 (1 HSPs)
scaffold0137 (14-259)||(6177-6421)
[»] scaffold0002 (1 HSPs)
scaffold0002 (28-259)||(434443-434681)
[»] scaffold0491 (2 HSPs)
scaffold0491 (25-259)||(11181-11423)
scaffold0491 (107-259)||(8755-8907)
[»] scaffold1519 (1 HSPs)
scaffold1519 (28-259)||(827-1063)
[»] scaffold0286 (1 HSPs)
scaffold0286 (109-259)||(11557-11705)
[»] scaffold0016 (1 HSPs)
scaffold0016 (109-259)||(114602-114750)
[»] scaffold0176 (1 HSPs)
scaffold0176 (128-259)||(18024-18151)
[»] scaffold0236 (1 HSPs)
scaffold0236 (211-259)||(10589-10637)
[»] scaffold0006 (1 HSPs)
scaffold0006 (201-259)||(149117-149174)


Alignment Details
Target: chr6 (Bit Score: 242; Significance: 1e-134; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 33342370 - 33342125
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33342370 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 33342271  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33342270 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtactccttttgtaaagaactcatttg 33342171  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  33342170 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 33342125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 34164761 - 34165006
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34164761 caaaggggaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 34164860  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34164861 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 34164960  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  34164961 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 34165006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 34166983 - 34167228
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34166983 caaaggggaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 34167082  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34167083 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaacttatttg 34167182  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  34167183 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 34167228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 6027151 - 6027395
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6027151 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 6027250  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6027251 gagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttg 6027349  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  6027350 atagtggattggagagtacaatctctcctccagagtatgtcaagtt 6027395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 25421208 - 25421454
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgta--gagagaatcattgagtgtcttg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  25421208 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttg 25421307  T
Q  112 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25421308 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatt 25421406  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25421407 tgatagtggattggagagtacaatctctcctccagagtaggtcaagtt 25421454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 16554772 - 16555017
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgt--agagagaatcattgagtgtcttg 111  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  16554772 caaaggggcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttg 16554871  T
Q  112 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatt 211  Q
    |||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  16554872 gtgagattgggaaaagggtagaaattagggtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactcatt 16554969  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||    
T  16554970 tgatagtggattggagagtgcaaactctcctccaaagtaggtcaagtt 16555017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 16631328 - 16631573
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgt--agagagaatcattgagtgtcttg 111  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  16631328 caaaggggcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttg 16631427  T
Q  112 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatt 211  Q
    |||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  16631428 gtgagattgggaaaagggtagaaattagggtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactcatt 16631525  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||    
T  16631526 tgatagtggattggagagtgcaaactctcctccaaagtaggtcaagtt 16631573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 16653015 - 16653260
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgt--agagagaatcattgagtgtcttg 111  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  16653015 caaaggggcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttg 16653114  T
Q  112 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatt 211  Q
    |||||||||||||| ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  16653115 gtgagattgggaaaagggtaaaaattagggtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactcatt 16653212  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16653213 tgatagtggattggagagtgcaaactctcctccagagtaggtcaagtt 16653260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 27647777 - 27648008
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggtgagattgggaa 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27647777 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccatgtagagagaatcattgagtgtcttggtgagattgggaa 27647876  T
Q  125 aggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattg 224  Q
    | |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||| |||||||||||||||    
T  27647877 aagggtagaaattagggtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactc-tttgatagtggattg 27647973  T
Q  225 gagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||| |||||||    
T  27647974 gagagtacaaactctcctccagagtagatcaagtt 27648008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 16578783 - 16578538
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgt--agagagaatcattgagtgtcttg 111  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  16578783 caaaggggcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacacgttgtaaagagagaatcattgagtgtcttg 16578684  T
Q  112 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatt 211  Q
    |||||||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  16578683 gtgagattgggaaaagggtagaaattagggtttgctcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactcatt 16578586  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16578585 tgatagtggattggagagtgcaaactctcctccagagtaggtcaagtt 16578538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 16616597 - 16616842
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgt--agagagaatcattgagtgtcttg 111  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  16616597 caaaggggcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacacgttgtaaagagagaatcattgagtgtcttg 16616696  T
Q  112 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatt 211  Q
    |||||||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  16616697 gtgagattgggaaaagggtagaaattagggtttgctcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactcatt 16616794  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16616795 tgatagtggattggagagtgcaaactctcctccagagtaggtcaagtt 16616842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 82 - 259
Target Start/End: Original strand, 13153886 - 13154063
Alignment:
Q  82 accttgtagagagaatcattgagtgtcttggtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13153886 accttgtagagagaatcattgagtgtcttggtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac 13153985  T
Q  182 ctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13153986 ctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 13154063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 412016 - 412250
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagag--aatcattgagtgtcttggtgagattggg 122  Q
    ||||||||||||| || ||||||||||||  |||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  412016 ctctagggtttagagt-ctttgattagagcttctcttgggttgaaaacatgggaaacaccttgaagagagaaaatcattgagtgtcttggtgagattggg 412114  T
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaa--cctcttgtattccttttgtaaagaactcatttgatagtg 219  Q
    |||  |||||||||||||| |||||||| |||||| || || || ||||||||||||||  | | ||||||  ||||||| ||||||||| |||||||||    
T  412115 aaaaaggtagaaattaggg-ttgttcattgtgaac-ttatcaaatctaatttcttgtaactctttttgtatctcttttgt-aagaactca-ttgatagtg 412210  T
Q  220 gattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||| |||||| ||| ||||||||||||||||||||||||    
T  412211 gattagagagttcaatctctcctccagagtaggtcaagtt 412250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 3073014 - 3072779
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggtgagattgg 121  Q
    ||||||||||||| || ||||||||||||  ||||||||||||  ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||    
T  3073014 ctctagggtttagagt-ctttgattagagcttctcttgggttgggaaacatgggaaacaccttgaagagagaaaatcattgagtgtcttggtgagattgg 3072916  T
Q  122 gaaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaa--cctcttgtattccttttgtaaagaactcatttgatagt 218  Q
    ||||  |||||||||||||| |||||||| |||||| ||||| || ||||||||||||||  | | ||||||  ||||||| ||||||||| ||||||||    
T  3072915 gaaaatggtagaaattaggg-ttgttcattgtgaac-ttgtcaaatctaatttcttgtaactctttttgtatctcttttgt-aagaactca-ttgatagt 3072820  T
Q  219 ggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    | |||||||||| ||| ||||||||||||||||||||||||    
T  3072819 gaattggagagttcaatctctcctccagagtaggtcaagtt 3072779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 6097695 - 6097471
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttg--tagagagaatcattgagtgtcttggtgagattgg 121  Q
    ||||||||||||||||||||||||||||||||||||| |||| | |||||||| ||||||||||   || || ||||||||||||| |||||||||||||    
T  6097695 ctctagggtttagggttctttgattagagtatctctttggttgggaaacatggtaaacaccttggtgagtgaaaatcattgagtgttttggtgagattgg 6097596  T
Q  122 gaaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtgg 220  Q
     |||  ||||||||||| || |||||| | |||||| ||||| || |||||||||||||||           ||||||| ||||||||| ||||||||||    
T  6097595 aaaaatggtagaaatta-ggattgttctttgtgaac-ttgtcaaatctaatttcttgtaac----------tcttttgt-aagaactca-ttgatagtgg 6097510  T
Q  221 attggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  6097509 attggagagttcaatctctcctccagagtaggtcaagtt 6097471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 2171792 - 2171552
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtg 114  Q
    |||||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       |||    
T  2171792 ctctagggtttagggt-ctttgattagagtttctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtg 2171694  T
Q  115 agattgggaaagg-ggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacctcttgtattccttttgtaaagaactcattt 212  Q
    |||||||||||   |||||||||||||||| |||| | |||||| ||||||| |||||||||||||||||  ||||||  |||| |||| |||||||||     
T  2171693 agattgggaaaaatggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaaccctttgtatctcttt-gtaa-gaactcatt- 2171599  T
Q  213 gatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  2171598 gatagtggattggagagttcaatctctcctccagagtaggtcaagtt 2171552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 31404932 - 31404695
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    |||||||||||||  |||||||||||| |||||||||||| ||||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  31404932 tagggtttagggtcttttgattagagt-tctcttgggttggaaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcatcagtgaga 31404834  T
Q  118 ttgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttgat 215  Q
    ||||||||  |||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  |||| |||| ||||||||| |||    
T  31404833 ttgggaaaatggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaa-gaactcatt-gat 31404739  T
Q  216 agtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||  ||| ||||||||||||||||| ||||||    
T  31404738 agtggattggagagatcaatctctcctccagagtaggccaagtt 31404695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 5406456 - 5406220
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| ||||||||||||| ||||| ||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  5406456 tagggtttagggt-ctttgattagagt-tctctcgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 5406359  T
Q  118 ttgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttgat 215  Q
    ||||||||  |||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  |||| |||| ||||||||| |||    
T  5406358 ttgggaaaatggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaa-gaactcatt-gat 5406264  T
Q  216 agtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||    
T  5406263 agtggattggagagatcaatctctcctccagagtaggtcaagtt 5406220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 5410781 - 5410545
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| ||||||||||||| ||||| ||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  5410781 tagggtttagggt-ctttgattagagt-tctctcgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 5410684  T
Q  118 ttgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttgat 215  Q
    ||||||||  |||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  |||| |||| ||||||||| |||    
T  5410683 ttgggaaaatggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaa-gaactcatt-gat 5410589  T
Q  216 agtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||    
T  5410588 agtggattggagagatcaatctctcctccagagtaggtcaagtt 5410545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 30834794 - 30834556
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||| ||| ||||||||||||| ||||||||||||| |||||| | |||||||| |  ||| |||  |||||||||||||||       ||||||    
T  30834794 tagggtttatggt-ctttgattagagt-tctcttgggttgagaaacattgtaaacacctcggtgagtgaaaatcattgagtgtcttgttcattggtgaga 30834697  T
Q  118 ttgggaaag--gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||   ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  |||| |  ||||||||||| |    
T  30834696 ttgggaaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctctttgg--aagaactcatt-g 30834602  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  30834601 atagtggattggagagttcaatctctcctccagagtaggtcaagtt 30834556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 32 - 259
Target Start/End: Complemental strand, 16452583 - 16452349
Alignment:
Q  32 gtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgagattgg 121  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||||||    
T  16452583 gtttagggt-ctttgattagagt-tctcttgggttgagaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgg 16452486  T
Q  122 gaaag--gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagt 218  Q
    ||||   ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| |||  ||  || ||   ||||||||||| ||||||    
T  16452485 gaaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacc-ctttcatatctctttggaagaactcatt-gatagt 16452390  T
Q  219 ggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  16452389 ggattggagagttcaatctctcctccagagtaggtcaagtt 16452349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 5413561 - 5413414
Alignment:
Q  109 ttggtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaac 206  Q
    |||||||||||||||||  |||||||||||||||| |||| | | |||| ||||||| ||||||||||||||||| | ||||||  |||| |||| ||||    
T  5413561 ttggtgagattgggaaaaaggtagaaattagggtt-gttctttgcgaac-ttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaa-gaac 5413466  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  5413465 tcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 5413414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 21588931 - 21589079
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||| | |  | |||||||||||||||||||  || ||||  |||| |||| ||||    
T  21588931 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaa-gaac 21589027  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  21589028 tcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 21589079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 21593664 - 21593812
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||| | |  | |||||||||||||||||||  || ||||  |||| |||| ||||    
T  21593664 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaa-gaac 21593760  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  21593761 tcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 21593812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 2973107 - 2972959
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||||||||  |||||||||||||| ||||||| | |||| | |  | |||||||||||||||||||  || ||||  |||| |||| ||||    
T  2973107 ttggtgagattgggaaaatgggtagaaattagg-tttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaa-gaac 2973011  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| |||||||| |||||||||||||||    
T  2973010 tcatt-gatagtggattggagagatcaatctctcctcaagagtaggtcaagtt 2972959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 28137576 - 28137428
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    ||||||||| |||||||  ||||||||||||||||| |||| | |||| | |  | |||||||||||||||||||  || ||||| |||| |||| ||||    
T  28137576 ttggtgagaatgggaaaatgggtagaaattagggtt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatttcttt-gtaa-gaac 28137480  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| |||||| |||||||||||||||||    
T  28137479 tcatt-gatagtggattggagagatcaatctctcccccagagtaggtcaagtt 28137428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 5409146 - 5409089
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  5409146 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 5409089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 16568953 - 16569170
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgt---agagagaatcattgagtgtcttggtgagattggga 123  Q
    ||||||| ||||| ||||||||||||| ||||||||||| | |||||| | ||||||||||    || || |||||||||||||||||   |||||| ||    
T  16568953 tagggttaagggt-ctttgattagagt-tctcttgggtttggaaacattgtaaacaccttgggtaagtgaaaatcattgagtgtcttg---agattgaga 16569047  T
Q  124 aag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggat 222  Q
    ||  |||||||||||||| ||||||| | |||| | |  | ||||||||||||||||||||            |||||| ||||||||| ||||||||||    
T  16569048 aaatgggtagaaattaggttttgttctttgtgagcttgtttaagctaatttcttgtaacct------------ttgtaa-gaactcatt-gatagtggat 16569133  T
Q  223 tggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||  ||| |||||||||||| |||||||||||    
T  16569134 tggagagatcaatctctcctccagattaggtcaagtt 16569170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 3808785 - 3808732
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||    
T  3808785 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtca 3808732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 26830200 - 26830143
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||| |||||||||||||    
T  26830200 aagaactcatt-gatagtggattggagagatcaatctctcctccaaagtaggtcaagtt 26830143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 17762990 - 17763138
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaac 206  Q
    |||||||||||| ||||  ||||||||||||||||| |||| | |||| | |  | |||||||||||||||||| |  ||||||  |||||   ||||||    
T  17762990 ttggtgagattgagaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaactcatttgtat--ctttttggaagaac 17763086  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| ||||||||||||||| |  ||| |||||||||||||||| |||||||    
T  17763087 tcatt-gatagtggattggagtgatcaatctctcctccagagtagatcaagtt 17763138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 9183199 - 9183051
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||| ||||  ||||||||||||||||| |||| | |||||  |  | |||||||||||||||||||  || ||||  |||| |||| ||||    
T  9183199 ttggtgagattgagaaaatgggtagaaattagggtt-gttctttgtgaatttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaa-gaac 9183103  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| |||||||||||| || ||||||||    
T  9183102 tcatt-gatagtggattggagagatcaatctctcctccagattatgtcaagtt 9183051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 26800679 - 26800731
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||    
T  26800679 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtca 26800731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 33160521 - 33160372
Alignment:
Q  109 ttggtgagattgggaaagg--ggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaac-ctcttgtattccttttgtaaaga 204  Q
    |||||||||||||||||    |||||||||||| ||| |||| | |||||| ||||||| |||||||||||||||| || ||||| ||  ||||| ||||    
T  33160521 ttggtgagattgggaaaaaaaggtagaaattagagtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaactcttttgta-tctctttgt-aaga 33160426  T
Q  205 actcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| ||||| |||||||||||||  ||| |||||||||||||||  |||||||    
T  33160425 actca-ttgatggtggattggagagatcaatctctcctccagagtatttcaagtt 33160372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 3039071 - 3038998
Alignment:
Q  109 ttggtgagattgggaaagg-ggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc 182  Q
    |||||||||||||||||   |||||||||||||||| |||||| |||| | || | |||||||||||||||||||    
T  3039071 ttggtgagattgggaaaattggtagaaattagggtt-gttcattgtgagctttttgaagctaatttcttgtaacc 3038998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 26954363 - 26954306
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| |||||| ||| |||||||||||||    
T  26954363 aagaactcatt-gatagtggattggagagatcaatctctcccccaaagtaggtcaagtt 26954306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 33211262 - 33211205
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||| ||| ||||||||||||  ||| |||||| |||||||||||||||||    
T  33211262 aagaactcattt-ataatggattggagagatcaatctctcccccagagtaggtcaagtt 33211205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 5138193 - 5138438
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5138193 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaataccttgtagagagaatcattgagtgtcttggt 5138292  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5138293 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 5138392  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5138393 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 5138438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 5135967 - 5136213
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaa-catgggaaacaccttgtagagagaatcattgagtgtcttgg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  5135967 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaataccttgtagagagaatcattgagtgtcttgg 5136066  T
Q  113 tgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcattt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5136067 tgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcattt 5136166  T
Q  213 gatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  5136167 gatagtggattggagagtacaaactctcctccagagtaggtcaagtt 5136213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 7124804 - 7125048
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgta--gagagaatcattgagtgtcttg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  7124804 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttg 7124903  T
Q  112 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7124904 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaaactaatttcttgtaacctcttgtattccttttgtaaagaactcatt 7125002  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaag 257  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  7125003 tgatagtggattggagagtacaatctctcctccagagtaggtcaag 7125048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 7122585 - 7122829
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgta--gagagaatcattgagtgtcttg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  7122585 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttg 7122684  T
Q  112 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7122685 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaaactaatttcttgtaacctcttgtattccttttgtaaagaactcatt 7122783  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaag 257  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||    
T  7122784 tgatagtggattggagagtacaatctctcctccatagtaggtcaag 7122829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 8395508 - 8395751
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8395508 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 8395607  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||| |||||||||||||    
T  8395608 gagattgggaaaagggtagaaattagggtttgttcatagtgaaca-tgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactcatttg 8395705  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  8395706 atagtggattggagagtacaatctctcctccagagtaggtcaagtt 8395751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 8393299 - 8393542
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8393299 caaaggggaagctctagggtttatggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 8393398  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||| |||||||||||||    
T  8393399 gagattgggaaaagggtagaaattagggtttgttcatagtgaaca-tgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactcatttg 8393496  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  8393497 atagtggattggagagtacaatctctcctccagagtaggtcaagtt 8393542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 41 - 259
Target Start/End: Complemental strand, 31495556 - 31495336
Alignment:
Q  41 tctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggtgagattgggaaaggggtagaaatt 137  Q
    |||||||||||||  ||||||||||||  ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||| |||||||||||    
T  31495556 tctttgattagagcttctcttgggttgggaaacatgggaaacaccttgaagagagaaaatcattgagtgtcttggtgagattgggaaaagggtagaaatt 31495457  T
Q  138 agggtttgttcatagtgaacattgtc-aagctaatttcttgtaa--cctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaa 234  Q
    | || |||||||| |||||| ||||| || ||||||||||||||  | | ||||||  ||||||| ||||||||| |||||||| ||||||||||| |||    
T  31495456 a-ggattgttcattgtgaac-ttgtcaaatctaatttcttgtaactctttttgtatctcttttgt-aagaactca-ttgatagttgattggagagttcaa 31495361  T
Q  235 actctcctccagagtaggtcaagtt 259  Q
     ||||||||||||||||||||||||    
T  31495360 tctctcctccagagtaggtcaagtt 31495336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 13992544 - 13992313
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggtgagattgggaa 124  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  ||||||||||||||||||||||||||||    
T  13992544 tagggtttagggt-ctttgattagagtctctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgggaa 13992446  T
Q  125 ag--gggtagaaattagggtttgttcatagtgaacattgtcaag-ctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttgatagtgg 220  Q
    |   ||||||||||||||||| |||| | |||||| |||||||  ||||||||||||||| || ||||||  || |||||| ||||||||| ||||||||    
T  13992445 aaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaatctaatttcttgtaactcttttgtat--ctcttgtaa-gaactcatt-gatagtgg 13992352  T
Q  221 attggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  13992351 attggagagttcaatctctcctccagagtaggtcaagtt 13992313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 30000063 - 29999826
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| ||||||||||||| ||||||||||| | |||||| | ||||||||||  ||| |||  || ||||||||||||       ||||||    
T  30000063 tagggtttagggt-ctttgattagagt-tctcttgggtttggaaacattgtaaacaccttggtgagtgaaaatcgttgagtgtcttgttcattggtgaga 29999966  T
Q  118 ttgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttgat 215  Q
    |||||||| ||||||||||||||||| |||| | |||||||| ||||| |||||||||||||||| || ||||||   |||||||| ||||||||| |||    
T  29999965 ttgggaaaagggtagaaattagggtt-gttctttgtgaacat-gtcaaagctaatttcttgtaactcttttgtatcttttttgtaa-gaactcatt-gat 29999870  T
Q  216 agtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||    
T  29999869 agtggattggagagatcaatctctcctccagagtaggtcaagtt 29999826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 259
Target Start/End: Complemental strand, 56178882 - 56178657
Alignment:
Q  41 tctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgagattgggaaag-ggg 129  Q
    |||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||||||||||  |||    
T  56178882 tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaaggg 56178784  T
Q  130 tagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttgatagtggattggaga 228  Q
    |||||||||||||| |||| | |||||| |  | ||||||||||||||||||| | ||||||  |||| |||| ||||||||| ||||||||||||||||    
T  56178783 tagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatctcttt-gtaa-gaactcatt-gatagtggattggaga 56178688  T
Q  229 gtacaaactctcctccagagtaggtcaagtt 259  Q
    |  ||| ||||||||||||||||||||||||    
T  56178687 gatcaatctctcctccagagtaggtcaagtt 56178657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 41639426 - 41639574
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    ||||| |||||||||||  ||||||||||||||||| |||| | |||||| || | |||||||||||||||||||  || |||| |  ||||||| ||||    
T  41639426 ttggtaagattgggaaaatgggtagaaattagggtt-gttctttgtgaactttttgaagctaatttcttgtaacccatttgtat-ctatttgtaa-gaac 41639522  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||  |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  41639523 tcatc-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 41639574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 12119559 - 12119683
Alignment:
Q  129 gtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaa-cctcttgtattccttttgtaaagaactcatttgatagtggattggag 227  Q
    |||||||||| ||||||||| | |||||| || | ||||||||||||||||| ||| ||||| ||  |||||||||||||||||| ||||||||||||||    
T  12119559 gtagaaattatggtttgttctttgtgaactttttgaagctaatttcttgtaacccttttgta-tctctttgtaaagaactcattt-atagtggattggag 12119656  T
Q  228 agtacaaactctcctccagagtaggtca 255  Q
    ||  ||| |||||| | |||||||||||    
T  12119657 agatcaatctctcc-caagagtaggtca 12119683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 48143042 - 48143191
Alignment:
Q  109 ttggtgagattgggaaagg--ggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc-tcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||    |||||||||||||||| |||| | |||||| |  | ||||||||||||||||||| | ||||||  || ||   |||||    
T  48143042 ttggtgagattgggaaaaaaaggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacccttttgtat--ctcttcataagaa 48143138  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  48143139 ctcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 48143191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 41964415 - 41964564
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc--tcttgtattccttttgtaaagaa 205  Q
    ||||||| |||||||||  ||||||||||||||||| |||| | |||| | |  | |||||||||| ||||||||  | |||||| ||||| |||| |||    
T  41964415 ttggtgaaattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgtttaagctaatttattgtaacccattttgtatcccttt-gtaa-gaa 41964511  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  41964512 ctcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 41964564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 9927626 - 9927478
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||||| |  | |||||||||||||||||||  || ||||  |||| |||| ||||    
T  9927626 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaa-gaac 9927530  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  9927529 tcatt-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 9927478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 8665499 - 8665556
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  8665499 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 8665556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 255
Target Start/End: Original strand, 46703500 - 46703645
Alignment:
Q  109 ttggtgagattgggaaaggg-gtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc--tcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||  | ||||||||||||||| |||| | |||| | |  | |||||||||||||||||||  | ||||||  |||| |||| |||    
T  46703500 ttggtgagattgggaaaatgagtagaaattagggtt-gttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctcttt-gtaa-gaa 46703596  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    ||||||| ||||||||||||||||  ||| ||||||||||||||||||||    
T  46703597 ctcattt-atagtggattggagagatcaatctctcctccagagtaggtca 46703645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 47038577 - 47038431
Alignment:
Q  109 ttggtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactc 208  Q
    ||||||||||||| ||| ||||||||||||||||| |||| | |||| | |  | ||||||||||||||||| |  |||||| |  ||||||| || |||    
T  47038577 ttggtgagattggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaatcatttgtat-ctgtttgtaagga-ctc 47038481  T
Q  209 atttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||| |||||||||||||||||  ||| |||||| |||||||| ||||||||    
T  47038480 att-gatagtggattggagagatcaatctctcccccagagtaagtcaagtt 47038431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 50673924 - 50673867
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  50673924 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 50673867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 252
Target Start/End: Complemental strand, 52095530 - 52095389
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaa-cctcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||| ||  ||||| ||  ||||| |||||    
T  52095530 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccatttgta-tctctttgt-aagaa 52095435  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtagg 252  Q
     || ||||||||||||||||||||  ||| |||||||||||||||||    
T  52095434 atc-tttgatagtggattggagagatcaatctctcctccagagtagg 52095389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 256
Target Start/End: Complemental strand, 5208003 - 5207865
Alignment:
Q  116 gattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtat-tccttttgtaaagaactcatttga 214  Q
    |||||| ||| |||||||||||||||||||||| | |||||| |  | |||||||||| ||| |||| ||||||| ||  ||||| ||||||||| ||||    
T  5208003 gattggaaaaagggtagaaattagggtttgttctttgtgaacttgttgaagctaatttattgcaacc-cttgtatatctatttgt-aagaactca-ttga 5207907  T
Q  215 tagtggattggagagtacaaactctcctccagagtaggtcaa 256  Q
    |||||||||||| ||  ||| |||||  ||||||||||||||    
T  5207906 tagtggattggaaagatcaatctctctcccagagtaggtcaa 5207865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 259
Target Start/End: Complemental strand, 5370237 - 5370103
Alignment:
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtcaa--gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttgatagtg 219  Q
    |||| |||||||||||||||| |||| | |||||| |||||||  ||||||||||||||||| | ||||||  |||| |||| ||||||||| |||||||    
T  5370237 aaagaggtagaaattagggtt-gttctttgtgaac-ttgtcaaaagctaatttcttgtaacccttttgtatctcttt-gtaa-gaactcatt-gatagtg 5370143  T
Q  220 gattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    || | |||||  ||| ||||||||||||||||||||||||    
T  5370142 gactagagagatcaatctctcctccagagtaggtcaagtt 5370103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 26364236 - 26364384
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||||| |  | |||||||||||||||||| |  ||||| ||  ||||| ||||||    
T  26364236 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaactcatttgta-tctctttgt-aagaac 26364332  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||| || ||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  26364333 tca-ttaatagtggattggagagatcaatctctcccccagattaggtcaagtt 26364384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 2209717 - 2209858
Alignment:
Q  113 tgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc--tcttgtattccttttgtaaagaactca 209  Q
    |||||||||||||  |||||||||||||||||| ||| | |||| | |  | |||||||||||||||||||  | ||||||  |||| |||| |||||||    
T  2209717 tgagattgggaaaatgggtagaaattagggttt-ttctttgtgagcttgttgaagctaatttcttgtaacccattttgtatctcttt-gtaa-gaactca 2209813  T
Q  210 tttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    || |||||||||||||||||   || ||||||||||||||||||||    
T  2209814 tt-gatagtggattggagagattaatctctcctccagagtaggtca 2209858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 6656047 - 6656104
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| ||||| ||||||||||||||||||    
T  6656047 aagaactcatt-gatagtggattggagagatcaatctctcatccagagtaggtcaagtt 6656104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 8648230 - 8648287
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||| ||||||||||||  ||| ||||||||||||||||||||||||    
T  8648230 aagaactcatt-gatattggattggagagatcaatctctcctccagagtaggtcaagtt 8648287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 12739718 - 12739570
Alignment:
Q  109 ttggtgagattgggaaagggg-tagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacctctt-gtattccttttgtaaagaa 205  Q
    |||||||||||||||||  || |||||||||||||| |||| | |||||| ||||||| |||||||||||||||||  || |||| |  ||||||  |||    
T  12739718 ttggtgagattgggaaaatggatagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccatttgtat-ctatttgtat-gaa 12739623  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||| |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  12739622 ctcatt-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 12739570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 379480 - 379524
Alignment:
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||    
T  379480 ttgatagtggattggagagatcaatctctcctccagagtaggtca 379524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 255
Target Start/End: Original strand, 12073392 - 12073536
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaac 206  Q
    |||||||||||||||||  |||||||||||||| ||||||| | |||| | |  | |||||||||| ||||||| |  ||||||  |||| |||| ||||    
T  12073392 ttggtgagattgggaaaatgggtagaaattagg-tttgttctttgtgagcttgttgaagctaatttattgtaactcatttgtatctcttt-gtaa-gaac 12073488  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    ||||| |||||||||||||||||  ||| ||||| ||||||||||||||    
T  12073489 tcatt-gatagtggattggagagatcaatctctcttccagagtaggtca 12073536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 26175713 - 26175656
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  26175713 aagaactcatt-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 26175656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 35662532 - 35662589
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  |||  ||||||| |||||||||||||||    
T  35662532 aagaactcatt-gatagtggattggagagatcaatatctcctcaagagtaggtcaagtt 35662589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 48893715 - 48893658
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||| ||||||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  48893715 aagaactc-tttgatagtggattggagagatcaatctctcccccagattaggtcaagtt 48893658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 54200074 - 54200001
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc 182  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||||| |  | |||||||||||||||||||    
T  54200074 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacc 54200001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 255
Target Start/End: Complemental strand, 26699585 - 26699466
Alignment:
Q  135 attagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttgatagtggattggagagtaca 233  Q
    |||||||||||||| | |||| | |  | |||||||||||||||||| || ||||||  |||| ||||||||||||||| ||| ||||||||||||  ||    
T  26699585 attagggtttgttctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctcttt-gtaaagaactcattt-ataatggattggagagatca 26699488  T
Q  234 aactctcctccagagtaggtca 255  Q
    | ||||   |||||||||||||    
T  26699487 atctctatcccagagtaggtca 26699466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 259
Target Start/End: Original strand, 4588014 - 4588107
Alignment:
Q  164 aagctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||| | ||||||  |||| |||| ||||||||| ||||||||||||||||| |||| |||||| ||| | ||||| |||||    
T  4588014 aagctaatttcttgtaacccttttgtatctcttt-gtaa-gaactcatt-gatagtggattggagagaacaatctctcccccataataggtgaagtt 4588107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 6542247 - 6542199
Alignment:
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||  ||| |||||| |||| ||||||||||||    
T  6542247 ttgatagtggattggagagatcaatctctcccccagggtaggtcaagtt 6542199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 27417033 - 27416985
Alignment:
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  27417033 ttgatagtggattggagagatcaatctctcccccagattaggtcaagtt 27416985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 33089966 - 33090021
Alignment:
Q  197 tgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggt 253  Q
    ||||||||||||||| ||||||||||| |||||  ||| |||||||| |||||||||    
T  33089966 tgtaaagaactcatt-gatagtggattagagagatcaatctctcctctagagtaggt 33090021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 33989899 - 33989989
Alignment:
Q  164 aagctaatttcttgtaa-cctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    ||||||||||||||||| ||| ||||||  |||| ||||| ||||| ||  ||||||||||||||||  ||| |||||| |||||||||||||    
T  33989899 aagctaatttcttgtaatccttttgtatctcttt-gtaaataactcgtta-atagtggattggagagatcaatctctccaccagagtaggtca 33989989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 36994524 - 36994672
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||||||||  |||||||||||| |||| |||| | |||| | |  | |||||||||||||||||||  || |||| ||||| |||| ||||    
T  36994524 ttggtgagattgggaaaatgggtagaaattaaggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcccttt-gtaa-gaac 36994620  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| |||||| ||| | ||| |||||||    
T  36994621 tcatt-gatagtggattggagagatcaatctctcccccatattagatcaagtt 36994672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 15290427 - 15290672
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15290427 caaagggaaagctctagggtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 15290526  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15290527 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 15290626  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  15290627 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 15290672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 15470796 - 15471041
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15470796 caaagggaaagctctagggtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 15470895  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15470896 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 15470995  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  15470996 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 15471041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 42575589 - 42575344
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42575589 caaagggaaagctctagggtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 42575490  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42575489 gagattgggaaaggggtagaaattagggattgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 42575390  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  42575389 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 42575344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 21 - 259
Target Start/End: Original strand, 25689865 - 25690102
Alignment:
Q  21 gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgt--agagagaatcattgagtgtcttggtgagat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  25689865 gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagat 25689964  T
Q  119 tgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagt 218  Q
    |||||||  ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||| |||||||||    
T  25689965 tgggaaaaaggtagaaattagggtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactc-tttgatagt 25690061  T
Q  219 ggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25690062 ggattggagagtacaaactctcctccagagtaggtcaagtt 25690102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 3439418 - 3439651
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgt--agagagaatcattgagtgtcttggtgagattggg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  3439418 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagaaaatcattgagtgtcttggtgagattggg 3439517  T
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggat 222  Q
    ||| ||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||||| |||||| |||||||| |||||||| |||||||||||||    
T  3439518 aaaagggtagaaattagggtttgttcattatgaac-ttggcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactc-tttgatagtggat 3439614  T
Q  223 tggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||| ||||||||||||||||||||||||    
T  3439615 tggagagtacaatctctcctccagagtaggtcaagtt 3439651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 2627649 - 2627884
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggtgagattgg 121  Q
    ||||||||||||| || ||||||||||||  ||||||||||||  ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||    
T  2627649 ctctagggtttagagt-ctttgattagagcttctcttgggttgggaaacatgggaaacaccttgaagagagaaaatcattgagtgtcttggtgagattgg 2627747  T
Q  122 gaaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaa--cctcttgtattccttttgtaaagaactcatttgatagt 218  Q
    |||| ||||||||||||||| |||||||| |||||| ||||| || ||||||||||| ||  | | ||||||  ||| ||| ||||||||| ||||||||    
T  2627748 gaaaagggtagaaattaggg-ttgttcattgtgaac-ttgtcaaatctaatttcttgcaactctttttgtatctcttgtgt-aagaactca-ttgatagt 2627843  T
Q  219 ggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  2627844 ggattggagagttcaatctctcctccagagtaggtcaagtt 2627884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 17982563 - 17982801
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  17982563 tagggtttagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 17982660  T
Q  118 ttgggaaag--gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||   ||||||||||||||||| |||| | |||||| ||||||| | ||||||||||||||| | ||||||  |||| |  ||||||||||| |    
T  17982661 ttgggaaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagttaatttcttgtaacccttttgtatctctttgg--aagaactcatt-g 17982755  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  17982756 atagtggattggagagttcaatctctcctccagagtaggtcaagtt 17982801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 34254586 - 34254351
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgagat 118  Q
    ||||||||||||| ||||||||||||| |||||||||||| | |||| | ||||||||||  ||| |||  |||||||||||||||       |||||||    
T  34254586 tagggtttagggt-ctttgattagagt-tctcttgggttggagacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagat 34254489  T
Q  119 tgggaaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaa-cctcttgtattccttttgtaaagaactcatttgata 216  Q
    ||||||| ||||||||||||||| |||||| | |||||| ||||| ||| ||||||||||||| ||| ||||| ||  ||||| ||||||| | ||||||    
T  34254488 tgggaaaagggtagaaattaggg-ttgttctttgtgaac-ttgtcaaagttaatttcttgtaacccttttgta-tctctttgt-aagaactta-ttgata 34254394  T
Q  217 gtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||  ||| |||||||| |||||||||||||||    
T  34254393 gtggattggagagatcaatctctcctctagagtaggtcaagtt 34254351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 44303764 - 44304003
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  44303764 tagggtttagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 44303861  T
Q  118 ttgggaaag---gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaa-cctcttgtattccttttgtaaagaactcattt 212  Q
    ||||||||    |||||||||||| |||| |||| | |||||| ||||||| ||||||||||||||| ||| ||||||  |||||   |||||||||||     
T  44303862 ttgggaaaaaaagggtagaaattaaggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaatccttttgtatctcttttt--aagaactcatt- 44303956  T
Q  213 gatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  44303957 gatagtggattggagagttcaatctctcctccagagtaggtcaagtt 44304003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 31218167 - 31218405
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  31218167 tagggtttagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 31218264  T
Q  118 ttgggaaagg--ggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||    |||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  |||| |  ||||||||||| |    
T  31218265 ttgggaaaaaatggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctctttgg--aagaactcatt-g 31218359  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||| |||||| ||| ||||||||||||||||||||||||    
T  31218360 atagtggattagagagttcaatctctcctccagagtaggtcaagtt 31218405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 42498193 - 42498342
Alignment:
Q  109 ttggtgagattgggaaagg--ggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc-tcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||    |||||||||||||||| |||| | |||||| |  | ||||||||||||||||||| | ||||||| |||| |||| |||    
T  42498193 ttggtgagattgggaaaaaaaggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatttcttt-gtaa-gaa 42498289  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  42498290 ctcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 42498342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 34256762 - 34256527
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgagat 118  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||| | ||||||||||  | | |||  |||||||||||||||       |||||||    
T  34256762 tagggtttagggt-ctttgattagagt-tatcttgggttggaaacattgtaaacaccttggtgtgtgaaaatcattgagtgtcttgttcattggtgagat 34256665  T
Q  119 tgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttgata 216  Q
    ||| |||  |||||||||||||||| |||| | |||||| ||||||| | ||||||||||||||| | ||||||  |||| |||| ||||||||| ||||    
T  34256664 tggaaaaatggtagaaattagggtt-gttctttgtgaac-ttgtcaaagttaatttcttgtaacccttttgtatctcttt-gtaa-gaactcatt-gata 34256570  T
Q  217 gtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||  ||| |||||||| |||||||||||||||    
T  34256569 gtggattggagagatcaatctctcctctagagtaggtcaagtt 34256527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 19945529 - 19945379
Alignment:
Q  109 ttggtgagattgggaaag--gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacctcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||   |||||||||||| |||| |||| | |||||| ||||||| ||||||||||||||||| ||| | |  || ||   |||||    
T  19945529 ttggtgagattgggaaaaaagggtagaaattatggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaaccacttttgtatctctttggaagaa 19945432  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||| |||||||||||||||||| ||| |||||||| |||||||||||||||    
T  19945431 ctcatt-gatagtggattggagagttcaatctctcctcgagagtaggtcaagtt 19945379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 259
Target Start/End: Complemental strand, 1746366 - 1746239
Alignment:
Q  128 ggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttgatagtggattgg 225  Q
    |||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  ||||    ||||||||||| |||||||||||||    
T  1746366 ggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctctttg---aagaactcatt-gatagtggattgg 1746273  T
Q  226 agagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| ||| |||||||||| |||||||||||||    
T  1746272 agagttcaatctctcctccatagtaggtcaagtt 1746239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 15212786 - 15212934
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaa-cctcttgtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||||| |  | ||||||||||||||||| ||  ||||| ||  ||||| ||||||    
T  15212786 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacccatttgta-tctctttgt-aagaac 15212882  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||| |||||| ||||||||||||  ||| |||||| ||||| |||||||||||    
T  15212883 tca-ttgataatggattggagagatcaatctctcccccagattaggtcaagtt 15212934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 42435159 - 42435011
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    ||||||||||||| |||  ||||||||||||||||| |||| | |||| | |  | |||||||||||||||||||  || ||||  |||| |||| ||||    
T  42435159 ttggtgagattggaaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaa-gaac 42435063  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| ||||||||||||||||   ||| ||||||||||||||||||||||||    
T  42435062 tcatt-gatagtggattggagaaatcaatctctcctccagagtaggtcaagtt 42435011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 1345449 - 1345391
Alignment:
Q  200 aaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||| |||||||||||| ||||| ||| |||||| |||||||||||||||||    
T  1345449 aaagaactcatt-gatagtggattgaagagttcaatctctcccccagagtaggtcaagtt 1345391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 259
Target Start/End: Original strand, 40321082 - 40321228
Alignment:
Q  111 ggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaactc 208  Q
    |||||||||||||||  ||||||||||||||||| |||||| |||| | |  | ||| |||||||||||||||  || ||||  |||| ||||| |||||    
T  40321082 ggtgagattgggaaaatgggtagaaattagggtt-gttcattgtgagcttgttgaagttaatttcttgtaacccattagtatctcttt-gtaaa-aactc 40321178  T
Q  209 atttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
     ||||||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  40321179 -tttgatagtggattggagagatcaatctctcccccagattaggtcaagtt 40321228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 4283524 - 4283672
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||  | |||| | |  | |||||||||||||||||||  || ||||  |||| |||| ||||    
T  4283524 ttggtgagattgggaaaatgggtagaaattagggtt-gttttttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaa-gaac 4283620  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| ||| |||| |||||||||||||||    
T  4283621 tcatt-gatagtggattggagagatcaatctcccctctagagtaggtcaagtt 4283672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 33352150 - 33352298
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||| ||||||||||| |||| | |||||| |  | || ||||||||||||||||  || ||||  |||| |||| ||||    
T  33352150 ttggtgagattgggaaaatgggtaaaaattagggtt-gttctttgtgaacttgttgaacctaatttcttgtaacccatttgtatctcttt-gtaa-gaac 33352246  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  33352247 tcatt-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 33352298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 40328871 - 40328922
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggt 253  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||    
T  40328871 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggt 40328922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 43036423 - 43036571
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||||| |  | || ||||||||||||||  |  ||||||  |||| |||| ||||    
T  43036423 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgaacttgttgaaactaatttcttgtaattcatttgtatctcttt-gtaa-gaac 43036519  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| ||||||||||| |||||  ||| |||||||||||| |||||||||||    
T  43036520 tcatt-gatagtggatttgagagatcaatctctcctccagattaggtcaagtt 43036571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 148
Target Start/End: Complemental strand, 8965859 - 8965820
Alignment:
Q  109 ttggtgagattgggaaaggggtagaaattagggtttgttc 148  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  8965859 ttggtgagattgggaaaaaggtagaaattagggtttgttc 8965820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 4743291 - 4743234
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| |||||| ||| |||||||||||||    
T  4743291 aagaactcatt-gatagtggattggagagatcaatctctcccccaaagtaggtcaagtt 4743234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 18655491 - 18655548
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| ||||||||||| |||||  ||| |||||||||| |||||||||||||    
T  18655491 aagaactcatt-gatagtggattagagagatcaatctctcctccaaagtaggtcaagtt 18655548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 10930267 - 10930219
Alignment:
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  10930267 ttgatagtggattggagagatcaatctctcccccagattaggtcaagtt 10930219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 40221845 - 40221893
Alignment:
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  40221845 ttgatagtggattggagagatcaatctctcccccagattaggtcaagtt 40221893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 238; Significance: 1e-132; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 16546534 - 16546779
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16546534 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 16546633  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16546634 gagattaggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttg 16546733  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16546734 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 16546779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 16544312 - 16544557
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16544312 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 16544411  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||    
T  16544412 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttctcataacctcttgtatcccttttgtaaagaactcatttg 16544511  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16544512 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 16544557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 40379995 - 40380239
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40379995 caaaggggaagctctagggtttagggttctttgattagagtatctctcgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 40380094  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  40380095 gagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaaactaatttcttgtaacctcttgtatcccttttgtaaagaactcatttg 40380193  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  40380194 atagtggattggagagttcaaactctcctccagagtaggtcaagtt 40380239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 40382206 - 40382450
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40382206 caaaggggaagctctagggtttagggttctttgattagagtatctctcgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 40382305  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40382306 gagattgggaaaggggtagaagttagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttg 40382404  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  40382405 atagtggattggagagttcaaactctcctccagagtaggtcaagtt 40382450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 25078023 - 25078269
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgta--gagagaatcattgagtgtcttg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  25078023 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttg 25078122  T
Q  112 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25078123 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatt 25078221  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25078222 tgatagtggattggagagtacaatctctcctccagagtaggtcaagtt 25078269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 25135992 - 25136238
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgta--gagagaatcattgagtgtcttg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  25135992 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttg 25136091  T
Q  112 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25136092 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatt 25136190  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25136191 tgatagtggattggagagtacaatctctcctccagagtaggtcaagtt 25136238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 10593161 - 10593406
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgt--agagagaatcattgagtgtcttg 111  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  10593161 caaagggggaactctagggtttagggttctttgattagagtatctcttgggtagaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttg 10593260  T
Q  112 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatt 211  Q
    |||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  10593261 gtgagattgggagaagggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactcatt 10593358  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10593359 tgatagtggattggagagtacaatctctcctccagagtaggtcaagtt 10593406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 21 - 259
Target Start/End: Complemental strand, 22536545 - 22536310
Alignment:
Q  21 gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggtgagattg 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  22536545 gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccctgcagagagaatcattgagtgtcttggtgagattg 22536446  T
Q  121 ggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtgg 220  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||| |||||||||||    
T  22536445 ggaaaagggtagaaattagggtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactc-tttgatagtgg 22536349  T
Q  221 attggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||| ||||||||||||||||||||||||    
T  22536348 attggggagtacaatctctcctccagagtaggtcaagtt 22536310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 29751414 - 29751180
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagag--aatcattgagtgtcttggtgagattggg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  29751414 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcattgagtgtcttggtgagattggg 29751315  T
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtgga 221  Q
    ||| |||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||    
T  29751314 aaaagggtagaaattagggtttgttcattgtgaac-ttgtcaaatctaatttcttgtaaccttttgtatcccttttgt-aagaactc-tttgatagtgga 29751218  T
Q  222 ttggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  29751217 ttggagagtacaatctctcctccagagtaggtcaagtt 29751180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 25 - 256
Target Start/End: Original strand, 29722438 - 29722669
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagag--aatcattgagtgtcttggtgagattggg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  29722438 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcattgagtgtcttggtgagattggg 29722537  T
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtgga 221  Q
    ||| ||||||||||||||||| |||||| |||||| ||||| || ||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||    
T  29722538 aaaagggtagaaattagggttagttcattgtgaac-ttgtctaatctaatttcttgtaaccttttgtatcccttttgt-aagaactc-tttgatagtgga 29722634  T
Q  222 ttggagagtacaaactctcctccagagtaggtcaa 256  Q
    ||||||||||||| |||||||||||||||||||||    
T  29722635 ttggagagtacaatctctcctccagagtaggtcaa 29722669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 29720278 - 29720512
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagag--aatcattgagtgtcttggtgagattggg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  29720278 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcattgagtgtcttggtgagattggg 29720377  T
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtgga 221  Q
    ||| ||||||||||||||||| |||||| |||||| ||||| || ||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||    
T  29720378 aaaagggtagaaattagggttagttcattgtgaac-ttgtctaatctaatttcttgtaaccttttgtatcccttttgt-aagaactc-tttgatagtgga 29720474  T
Q  222 ttggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  29720475 ttggagagtacaatctctcctctagagtaggtcaagtt 29720512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 9789478 - 9789244
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggtgagattgg 121  Q
    ||||||||||||| || ||||||||||||  ||||||||||||  |||||||||||||||||||  ||| |||  |||||||||||||||||||||||||    
T  9789478 ctctagggtttagagt-ctttgattagagcttctcttgggttgggaaacatgggaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgg 9789380  T
Q  122 gaaaggggtagaaattagggtttgttcatagtgaacattgtcaag-ctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttgatagtg 219  Q
     ||| |||||||||||| |||| |||| | |||||| |||||||  ||||||||||||||| || ||||||  ||||||||| ||||||||| |||||||    
T  9789379 aaaaagggtagaaattaaggtt-gttccttgtgaac-ttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaa-gaactcatt-gatagtg 9789284  T
Q  220 gattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  9789283 gattggagagttcaatctctcctccagagtaggtcaagtt 9789244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 16409389 - 16409623
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggtgagattgg 121  Q
    ||||||||||||| || ||||||||||||  ||||||||||||  |||||||| ||||||||||  ||| |||  |||||||||||||||||||||||||    
T  16409389 ctctagggtttagagt-ctttgattagagcttctcttgggttgggaaacatggtaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgg 16409487  T
Q  122 gaaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttgatagtg 219  Q
     ||| ||||||||||||||| |||||| | |||||| ||||| || ||||||||||||||| || ||||||  ||||||| ||||||||| |||||||||    
T  16409488 aaaaagggtagaaattaggg-ttgttctttgtgaac-ttgtcaaatctaatttcttgtaactcttttgtatctcttttgt-aagaactca-ttgatagtg 16409583  T
Q  220 gattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  16409584 gattggagagttcaatctctcctccagagtaggtcaagtt 16409623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 18441902 - 18441668
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggtgagattgg 121  Q
    ||||||||||||| || ||||||||||||  ||||||||||||  |||||||||||||||||||  ||| |||  |||||||||||||||||||||||||    
T  18441902 ctctagggtttagagt-ctttgattagagcttctcttgggttgggaaacatgggaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgg 18441804  T
Q  122 gaaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttgatagtg 219  Q
     ||| ||||||||||||||| |||||| | |||||| ||||| || ||||||||||||||| || ||||||  ||||||| ||||||||| |||||||||    
T  18441803 aaaaagggtagaaattaggg-ttgttccttgtgaac-ttgtcaaatctaatttcttgtaactcttttgtatctcttttgt-aagaactca-ttgatagtg 18441708  T
Q  220 gattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| ||| |||||||| |||||||||||||||    
T  18441707 gattggagagttcaatctctcctctagagtaggtcaagtt 18441668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 26177797 - 26178030
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggtgagattgg 121  Q
    ||||||||||||| || ||||||||||||  ||||||||||||  |||||||| ||||||||||  ||| |||  |||||||||||||||||||||||||    
T  26177797 ctctagggtttagagt-ctttgattagagcttctcttgggttgggaaacatggtaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgg 26177895  T
Q  122 gaaaggggtagaaattagggtttgttcatagtgaacattgtcaag-ctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttgatagtg 219  Q
     |||||| |||||||||||||| |||| | |||||| |||||||  ||||||||||||||| || ||||||  ||||||||| ||||||||| |||||||    
T  26177896 aaaaggg-tagaaattagggtt-gttctttgtgaac-ttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaa-gaactcatt-gatagtg 26177990  T
Q  220 gattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  26177991 gattggagagttcaatctctcctccagagtaggtcaagtt 26178030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 25412672 - 25412908
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  25412672 tagggtttagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 25412769  T
Q  118 ttgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttgat 215  Q
    |||||||| ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  |||| |||| ||||||||| |||    
T  25412770 ttgggaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaa-gaactcatt-gat 25412864  T
Q  216 agtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||    
T  25412865 agtggattggagagatcaatctctcctccagagtaggtcaagtt 25412908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 26170688 - 26170910
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggtgagattgg 121  Q
    ||||||||||||| || ||||||||| ||  ||||||||||||  |||||||| ||||||||||  ||| |||  ||||||||||||||||||||||| |    
T  26170688 ctctagggtttagagt-ctttgattacagcttctcttgggttgggaaacatggtaaacaccttggtgagtgaaaatcattgagtgtcttggtgagatt-g 26170785  T
Q  122 gaaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtgg 220  Q
    |||| |||||||||||| || |||||| | |||||| ||||| || |||||||||||||||           ||||||| ||||||||| ||||||||||    
T  26170786 gaaaagggtagaaatta-ggattgttctttgtgaac-ttgtcaaatctaatttcttgtaac----------tcttttgt-aagaactca-ttgatagtgg 26170871  T
Q  221 attggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  26170872 attggagagttcaatctctcctccagagtaggtcaagtt 26170910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 255
Target Start/End: Original strand, 13342971 - 13343204
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| || |||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  13342971 tagggtttagggt-ctctgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 13343068  T
Q  118 ttgggaaag--gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaa-cctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||   ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||| ||| ||||||  ||||    ||||||||||| |    
T  13343069 ttgggaaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaatccttttgtatctctttg---aagaactcatt-g 13343162  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  13343163 atagtggattggagagttcaatctctcctccagagtaggtca 13343204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 30182499 - 30182736
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||| ||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  30182499 tagggattagggt-ctttgattagagt-tctcttgggttgggaaacattgcaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 30182596  T
Q  118 ttgggaaagg-ggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttga 214  Q
    ||||||||   |||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | || |||  |||| |  ||||||||||| ||    
T  30182597 ttgggaaaaatggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttctatctctttgg--aagaactcatt-ga 30182691  T
Q  215 tagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||||    
T  30182692 tagtggattggagagttcaatctctcctccagagtatgtcaagtt 30182736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 36074302 - 36074063
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  36074302 tagggtttagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 36074205  T
Q  118 ttgggaaag----gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatt 211  Q
    ||||||||     ||||||||||||||||| |||| | | |||| ||||||| |||||||||||||||| || ||||||  ||||    |||||||||||    
T  36074204 ttgggaaaaaaaagggtagaaattagggtt-gttctttgcgaac-ttgtcaaagctaatttcttgtaactcttttgtatctctttg---aagaactcatt 36074110  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
     |||||||||||||||||| ||| |||||||||| |||||||||||||    
T  36074109 -gatagtggattggagagttcaatctctcctccaaagtaggtcaagtt 36074063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 40147261 - 40147409
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||| | |  | |||||||||||||||||| |  ||||||  |||| |||| ||||    
T  40147261 ttggtgagattgggaaaatgggtagaaattagggtt-gttcttcgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaa-gaac 40147357  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  40147358 tcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 40147409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 256
Target Start/End: Original strand, 13239674 - 13239896
Alignment:
Q  41 tctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgagattgggaaagg-gg 129  Q
    |||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       |||||||||| |||   ||    
T  13239674 tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaaaaaatgg 13239772  T
Q  130 tagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttgatagtggattggaga 228  Q
    ||||||||||||||| ||| | |||||| |  | |||||||||||||||||| || ||||| ||  ||||| ||||||||| ||||||||||||||||||    
T  13239773 tagaaattagggttt-ttctttgtgaacttgttgaagctaatttcttgtaactcttttgta-tctctttgt-aagaactca-ttgatagtggattggaga 13239868  T
Q  229 gtacaaactctcctccagagtaggtcaa 256  Q
    |  ||| |||||||||||||||||||||    
T  13239869 gatcaatctctcctccagagtaggtcaa 13239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 259
Target Start/End: Original strand, 37439161 - 37439289
Alignment:
Q  128 ggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttgatagtggattgg 225  Q
    |||||||||||||| |||||| | |||||| ||||| ||| |||||||||||||| || ||||| ||  ||||| ||||||||| |||||||||||||||    
T  37439161 ggtagaaattaggg-ttgttctttgtgaac-ttgtcaaagttaatttcttgtaactcttttgta-tctctttgt-aagaactca-ttgatagtggattgg 37439255  T
Q  226 agagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||  ||| ||||||||||||||||||||||||    
T  37439256 agagatcaatctctcctccagagtaggtcaagtt 37439289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 213465 - 213613
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||| | |  | |||||||||||||||||||  || ||||  |||| |||| ||||    
T  213465 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttaaagctaatttcttgtaacccatttgtatctcttt-gtaa-gaac 213561  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| |||||||||| |||||||||||||    
T  213562 tcatt-gatagtggattggagagatcaatctctcctccatagtaggtcaagtt 213613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 256
Target Start/End: Complemental strand, 13695859 - 13695713
Alignment:
Q  109 ttggtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaa-cctcttgtattccttttgtaaagaact 207  Q
    |||| |||||||||||| ||||| |||||||||||||||| | |||| | |  | ||||||||||||||||| ||| ||||| ||  |||||||||||||    
T  13695859 ttggagagattgggaaaagggtacaaattagggtttgttctttgtgagcttgttaaagctaatttcttgtaacccttttgta-tctctttgtaaagaact 13695761  T
Q  208 catttgatagtggattggagagtacaaactctcctccagagtaggtcaa 256  Q
    || || |||||||||| |||||   |  |||||||||| ||||||||||    
T  13695760 ca-ttaatagtggattagagagattattctctcctccatagtaggtcaa 13695713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 28278316 - 28278464
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||||||||  |||||||||||| |||| |||| | |||| | |  | |||||||||||||||||||  || ||||  |||| ||||| |||    
T  28278316 ttggtgagattgggaaaatgggtagaaattatggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaaa-aac 28278412  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  28278413 tcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 28278464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 32636824 - 32636972
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacctctt-gtattccttttgtaaagaa 205  Q
    |||||||||||||||||  |||||||||||| |||| |||| | |||||| ||||||| |||||||||||||||||  || ||||  |||| |||| |||    
T  32636824 ttggtgagattgggaaaatgggtagaaattatggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccatttgtatctcttt-gtaa-gaa 32636919  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||| ||||||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  32636920 ctc-tttgatagtggattggagagatcaatctctcccccagattaggtcaagtt 32636972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 16641008 - 16640961
Alignment:
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagt 258  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||||    
T  16641008 ttgatagtggattggagagatcaatctctcctccagagtaggtcaagt 16640961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 5058136 - 5058193
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| |||||||| |||||||||||||||    
T  5058136 aagaactcatt-gatagtggattggagagatcaatctctcctctagagtaggtcaagtt 5058193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 30683178 - 30682942
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||| ||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  30683178 tagggttgagggt-ctttgattagagt-tctcttgggttgcgaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcatttgtgaga 30683081  T
Q  118 ttgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc-tcttgtattccttttgtaaaga-actcatttga 214  Q
    ||||||||  |||||||||||||||||  ||    |||||| |  | ||||||||||||||||||| | ||||||| |||| ||||  | ||||||| ||    
T  30683080 ttgggaaaaagggtagaaattagggttcttt----gtgaacttgttgaagctaatttcttgtaacccttttgtatttcttt-gtaagaatactcatt-ga 30682987  T
Q  215 tagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||  ||| |||||| ||||| |||||||||||    
T  30682986 tagtggattggagagatcaatctctcccccagattaggtcaagtt 30682942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 28750732 - 28750675
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  28750732 aagaactcatt-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 28750675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 4160702 - 4160743
Alignment:
Q  214 atagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    ||||||||||||||||  ||| ||||||||||||||||||||    
T  4160702 atagtggattggagagatcaatctctcctccagagtaggtca 4160743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 19806463 - 19806511
Alignment:
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  19806463 ttgatagtggattggagagatcaatctctcccccagattaggtcaagtt 19806511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 238; Significance: 1e-132; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 4598788 - 4598543
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4598788 caaagggaaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccctgtagagagaatcattgagtgtcttggt 4598689  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4598688 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 4598589  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4598588 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 4598543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 10056122 - 10056367
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10056122 caaaggggaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 10056221  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10056222 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 10056321  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10056322 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 10056367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 10058344 - 10058589
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10058344 caaaggggaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 10058443  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10058444 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 10058543  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10058544 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 10058589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 10060566 - 10060811
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10060566 caaaggggaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 10060665  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10060666 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 10060765  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10060766 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 10060811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 10062788 - 10063033
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10062788 caaaggggaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 10062887  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10062888 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 10062987  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10062988 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 10063033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 10065010 - 10065255
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10065010 caaaggggaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 10065109  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10065110 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 10065209  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10065210 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 10065255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 10211298 - 10211543
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10211298 caaagggaaagctctagggtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 10211397  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10211398 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 10211497  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10211498 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 10211543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 4601009 - 4600764
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4601009 caaagggaaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 4600910  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4600909 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaaccttttgtattccttttgtaaagaactcatttg 4600810  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  4600809 atagtggattggagagtacaaactctcctctagagtaggtcaagtt 4600764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 10209078 - 10209323
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10209078 caaagggaaagctctagggtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 10209177  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10209178 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtagtccttttgtaaagaactcatttg 10209277  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10209278 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 10209323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 25637331 - 25637575
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25637331 caaaggggtatctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 25637430  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25637431 gagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttg 25637529  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  25637530 atagtggattggagagtacaatctctcctccagagtaggtcaagtt 25637575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 3617352 - 3617598
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgta--gagagaatcattgagtgtcttg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  3617352 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttg 3617451  T
Q  112 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3617452 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatt 3617550  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3617551 tgatagtggattggagagtacaatctctcctccagagtaggtcaagtt 3617598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 14 - 213
Target Start/End: Original strand, 10067232 - 10067431
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10067232 caaaggggaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 10067331  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10067332 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 10067431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 6716414 - 6716647
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgt--agagagaatcattgagtgtcttggtgagattggg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  6716414 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattggg 6716513  T
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggat 222  Q
    ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||| |||||||||||||    
T  6716514 aaaagggtagaaattagggtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactc-tttgatagtggat 6716610  T
Q  223 tggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||||||||||||||||||||    
T  6716611 tggagagtacaaactctcctccagagtaggtcaagtt 6716647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 54635039 - 54635272
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgt--agagagaatcattgagtgtcttggtgagattggg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  54635039 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattggg 54635138  T
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggat 222  Q
    ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||| |||||||||||||    
T  54635139 aaaagggtagaaattagggtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactc-tttgatagtggat 54635235  T
Q  223 tggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||||||||||||||||||||    
T  54635236 tggagagtacaaactctcctccagagtaggtcaagtt 54635272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 45282897 - 45283134
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgta--gagagaatcattgagtgtcttggtgagattggg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  45282897 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgcaaagagagaatcattgagtgtcttggtgagattggg 45282996  T
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgt--aaagaactcatttgatagtgg 220  Q
    ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||| |   ||||||||||||||||||||    
T  45282997 aaaagggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaaccttttgtatccctttttttgtaagaactcatttgatagtgg 45283095  T
Q  221 attggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  45283096 attggagagtacaatctctcctccagagtaggtcaagtt 45283134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 801005 - 801240
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggtgagattgg 121  Q
    ||||||||||||| || ||||||||||||  ||||||||||||  ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||    
T  801005 ctctagggtttagagt-ctttgattagagcttctcttgggttgggaaacatgggaaacaccttgaagagagaaaatcattgagtgtcttggtgagattgg 801103  T
Q  122 gaaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaa--cctcttgtattccttttgtaaagaactcatttgatagt 218  Q
    |||| ||||||||||||||| |||||||| |||||| ||||| || ||||||||||||||  | | ||||||  ||||||| ||||||||| ||||||||    
T  801104 gaaaagggtagaaattaggg-ttgttcattgtgaac-ttgtcaaatctaatttcttgtaactctttttgtatctcttttgt-aagaactca-ttgatagt 801199  T
Q  219 ggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  801200 ggattggagagtacaatctctcctccagagtaggtcaagtt 801240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 6718598 - 6718718
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgt--agagagaatcattgagtgtcttggtgagattggg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  6718598 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattggg 6718697  T
Q  123 aaaggggtagaaattagggtt 143  Q
    ||| |||||||||||||||||    
T  6718698 aaaagggtagaaattagggtt 6718718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 74 - 259
Target Start/End: Complemental strand, 7780208 - 7780024
Alignment:
Q  74 tgggaaacaccttgtagagagaa--tcattgagtgtcttggtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaa 170  Q
    |||||||||||||| ||||||||  |||||||||||||| |||||||||||||| ||||||||||||||| |||||||| |||||| ||||| || ||||    
T  7780208 tgggaaacaccttgaagagagaaaatcattgagtgtcttcgtgagattgggaaaagggtagaaattaggg-ttgttcattgtgaac-ttgtcaaatctaa 7780111  T
Q  171 tttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||| ||||||  ||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  7780110 tttcttgtaaccttttgtatctcttttgt-aagaactca-ttgatagtggattggagagttcaatctctcctccagagtaggtcaagtt 7780024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 23200398 - 23200158
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg------gtga 115  Q
    |||||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||      ||||    
T  23200398 ctctagggtttagggt-ctttgattagagtttctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcttggtga 23200300  T
Q  116 gattgggaaagg-ggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcattt 212  Q
    ||||||||||   |||||||||||| ||| |||| | |||||| ||||||| ||||||||||||||||| | |||||| | |||||||| |||||||||     
T  23200299 gattgggaaaaatggtagaaattagagtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtat-ctttttgtaa-gaactcatt- 23200205  T
Q  213 gatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  23200204 gatagtgaattggagagttcaatctctcctccagagtaggtcaagtt 23200158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 23198199 - 23197959
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg------gtga 115  Q
    |||||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||      ||||    
T  23198199 ctctagggtttagggt-ctttgattagagtttctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcttggtga 23198101  T
Q  116 gattgggaaagg-ggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcattt 212  Q
    ||||||||||   |||||||||||| ||| |||  | |||||| ||||||| ||||||||||||||||| | |||||| | |||||||| |||||||||     
T  23198100 gattgggaaaaatggtagaaattagagtt-gttttttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtat-ctttttgtaa-gaactcatt- 23198006  T
Q  213 gatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  23198005 gatagtgaattggagagttcaatctctcctccagagtaggtcaagtt 23197959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 5258402 - 5258164
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  5258402 tagggtttagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 5258305  T
Q  118 ttgggaaag--gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||   ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  |||| |  ||||||||||| |    
T  5258304 ttgggaaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctctttgg--aagaactcatt-g 5258210  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||||    
T  5258209 atagtggattggagagttcaatctcttctccagagtaggtcaagtt 5258164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 45095075 - 45095311
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  45095075 tagggtttagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 45095172  T
Q  118 ttgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttgat 215  Q
    ||||||||  |||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  |||| |||| ||||||||| |||    
T  45095173 ttgggaaaatggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaa-gaactcatt-gat 45095267  T
Q  216 agtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||  ||| |||||||| |||||||||||||||    
T  45095268 agtggattggagagatcaatctctcctctagagtaggtcaagtt 45095311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 9636385 - 9636146
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggt-------gaga 117  Q
    ||||||||||||| ||||||||||||| ||||||||||||  ||| || | ||||||||||  ||| |||  |||||||||||||||||       ||||    
T  9636385 tagggtttagggt-ctttgattagagtctctcttgggttgggaaatattgtaaacaccttggtgagtgaaaatcattgagtgtcttggtcattggtgaga 9636287  T
Q  118 ttggga--aaggggtagaaattagggtttgttcatagtgaacattgtcaag-ctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||  || ||||||||||||||||| |||| | |||||| |||||||  |||||||||||||||| | |||||| | |||||||| ||||||||| |    
T  9636286 ttgggagaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaaactaatttcttgtaacccttttgtat-ctttttgtaa-gaactcatt-g 9636192  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||    
T  9636191 atagtggattggagagttcaatctctcctccaaagtaggtcaagtt 9636146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 5260581 - 5260343
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggt-------gaga 117  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||||       ||||    
T  5260581 tagggtttagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttggtcattggtgaga 5260484  T
Q  118 ttgggaaag--gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||   ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  |||| |  ||||||||||| |    
T  5260483 ttgggaaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctctttgg--aagaactcatt-g 5260389  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||| ||| |||| ||||| |||||||||||||    
T  5260388 atagtggattggagagttcaatctcttctccaaagtaggtcaagtt 5260343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 37408458 - 37408606
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  |||| |||| |||    
T  37408458 ttggtgagattgggaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaa-gaa 37408553  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||| |||||||||||| ||||  ||| ||||||||||||||||||||||||    
T  37408554 ctcatt-gatagtggattgaagagatcaatctctcctccagagtaggtcaagtt 37408606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 7762265 - 7762413
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaac 206  Q
    |||||||||||| ||||  ||||||||||||||||| |||| | |||||| |  | |||||||||||||||||| || ||||| ||  ||||| ||||||    
T  7762265 ttggtgagattgagaaaaagggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaactcttttgta-tctctttgt-aagaac 7762361  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||| |||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  7762362 tca-ttgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 7762413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 259
Target Start/End: Complemental strand, 19684054 - 19683909
Alignment:
Q  112 gtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactc 208  Q
    ||||||||||||||  ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  |||| |||| ||||||    
T  19684054 gtgagattgggaaaatgggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaa-gaactc 19683959  T
Q  209 atttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||| |||||||||||||||||  ||| |||||||||| |||||||||||||    
T  19683958 att-gatagtggattggagagatcaatctctcctccatagtaggtcaagtt 19683909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 34491212 - 34491360
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||| | |  | |||||||||||||||||| |  ||||||  |||| |||| ||||    
T  34491212 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaa-gaac 34491308  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  34491309 tcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 34491360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 9581193 - 9581430
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgt---agagagaatcattgagtgtcttg-------gtgag 116  Q
    ||||||| ||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||    || || |||||||||||||||||       ||| |    
T  9581193 tagggttaagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtggg 9581290  T
Q  117 attgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaactcatttgat 215  Q
    ||| ||||| |||||||||||||| ||||||| | |||| | |  | ||||||||||||| |||||  || |||| ||||| |||| ||||||||| |||    
T  9581291 attcggaaatgggtagaaattagg-tttgttctttgtgagcttgtttaagctaatttcttttaacccatttgtatcccttt-gtaa-gaactcatt-gat 9581386  T
Q  216 agtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||    
T  9581387 agtggattggagagatcaatctctcctccagagtaggtcaagtt 9581430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 259
Target Start/End: Complemental strand, 39153526 - 39153381
Alignment:
Q  112 gtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaactca 209  Q
    ||||||||||||||  |||||||||||||| ||||||||| |||| | |  | |||||||||||||||||| |  |||||| |||||    |||||||||    
T  39153526 gtgagattgggaaaatgggtagaaattagg-tttgttcattgtgagcttgtttaagctaatttcttgtaactcatttgtatccctttat--aagaactca 39153430  T
Q  210 tttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    || ||||||||||||||||| |||| |||||| ||||| |||||||||||    
T  39153429 tt-gatagtggattggagagaacaatctctcccccagattaggtcaagtt 39153381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 256
Target Start/End: Original strand, 7764476 - 7764609
Alignment:
Q  120 gggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttgatagt 218  Q
    |||||| ||||||||||||||| |||||| | |||||| |  | |||||||||||||||||| || ||||| ||  ||||| ||||||||| ||||||||    
T  7764476 gggaaaagggtagaaattaggg-ttgttctttgtgaacttgttaaagctaatttcttgtaactcttttgta-tctctttgt-aagaactca-ttgatagt 7764571  T
Q  219 ggattggagagtacaaactctcctccagagtaggtcaa 256  Q
    |||||||||||   || |||||||||||||||||||||    
T  7764572 ggattggagagatgaatctctcctccagagtaggtcaa 7764609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 4569952 - 4570100
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||||| |||| | |  | |||||||||||||||||| |  ||||||  |||| |||| ||||    
T  4569952 ttggtgagattgggaaaatgggtagaaattagggtt-gttcattgtgagcttattgaagctaatttcttgtaactcatttgtatctcttt-gtaa-gaac 4570048  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| |||| ||||||||||||| |||||    
T  4570049 tcatt-gatagtggattggagagatcaatctctactccagagtaggtgaagtt 4570100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 6095676 - 6095619
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  6095676 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 6095619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 29196555 - 29196406
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaa-cctcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||  |||||||||||||||||||||| | |||| | ||||| |||||||||||||| || ||  ||||| ||  ||||| |||||    
T  29196555 ttggtgagattgggaaaatgggtagaaattagggtttgttctttgtgagc-ttgtcaaagctaatttcttggaacccatttgta-tctctttgt-aagaa 29196459  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||| |||||||||||||||||||  ||| |||||| ||| | |||||||||||    
T  29196458 ctca-ttgatagtggattggagagatcaatctctcccccaaattaggtcaagtt 29196406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 259
Target Start/End: Original strand, 30236129 - 30236273
Alignment:
Q  113 tgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaactcat 210  Q
    |||||||||||||  ||||||||||||||||| |||| | |||| | |  | |||||||||||||||||||| || ||||  |||| |||| ||||||||    
T  30236129 tgagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctcttt-gtaa-gaactcat 30236225  T
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    | |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  30236226 t-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 30236273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 54593795 - 54593852
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||| ||||||||    
T  54593795 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtatgtcaagtt 54593852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 259
Target Start/End: Original strand, 760850 - 760995
Alignment:
Q  112 gtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaactca 209  Q
    ||||||||||||||  |||||||||||||| | ||||| | |||| | |  | |||||||||||||||||||  || |||| ||||| |||| |||||||    
T  760850 gtgagattgggaaaatgggtagaaattagg-tctgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt-gtaa-gaactca 760946  T
Q  210 tttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    || |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  760947 tt-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 760995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 259
Target Start/End: Complemental strand, 22835167 - 22835022
Alignment:
Q  112 gtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaactca 209  Q
    ||||||||||||||  |||||||||||||| ||||||| | |||| | |  | |||||||||||||||||||  || |||| ||||| |||| |||||||    
T  22835167 gtgagattgggaaaatgggtagaaattagg-tttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt-gtaa-gaactca 22835071  T
Q  210 tttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    || |||||||||||||||||  ||| |||||| ||| | |||||||||||    
T  22835070 tt-gatagtggattggagagatcaatctctccgccatattaggtcaagtt 22835022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 44331545 - 44331693
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaa-cctcttgtattccttttgtaaagaac 206  Q
    ||||||||||| |||||  ||||||||||||||||| |||||| |||| | |  | ||||||||||||||||| ||  ||||||  |||| |||| ||||    
T  44331545 ttggtgagattaggaaaatgggtagaaattagggtt-gttcattgtgagcttgttgaagctaatttcttgtaagccatttgtatctcttt-gtaa-gaac 44331641  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    | ||| |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  44331642 ttatt-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 44331693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 196
Target Start/End: Complemental strand, 51352278 - 51352191
Alignment:
Q  109 ttggtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttt 196  Q
    ||||||||||| |||||  | ||||| ||||||||||||||| |||| | || | ||| |||||||||||||||  ||||||| ||||    
T  51352278 ttggtgagattaggaaaatgatagaagttagggtttgttcattgtgagctttttaaagttaatttcttgtaaccatttgtatttcttt 51352191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 5236624 - 5236551
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc 182  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||||| |  | |||||||||||||||||||    
T  5236624 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacc 5236551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 16499120 - 16499177
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| |||||| ||||||||||| |||||    
T  16499120 aagaactcatt-gatagtggattggagagatcaatctctcccccagagtaggttaagtt 16499177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 29810959 - 29811016
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  29810959 aagaactcatt-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 29811016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 259
Target Start/End: Original strand, 31314447 - 31314593
Alignment:
Q  111 ggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaactc 208  Q
    |||||||||| ||||  ||||||||||||||||| |||||| |||| | |  | |||||||||||||||||||  || |||| | |||||||| ||||||    
T  31314447 ggtgagattgagaaaatgggtagaaattagggtt-gttcattgtgatcttgttgaagctaatttcttgtaacccatttgtat-ctttttgtaa-gaactc 31314543  T
Q  209 atttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
     ||||||||||||||||||||  |||  ||||| ||| | |||||||||||    
T  31314544 -tttgatagtggattggagagatcaatatctcccccatattaggtcaagtt 31314593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 40735474 - 40735531
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  40735474 aagaactcatt-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 40735531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 43403821 - 43403768
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    ||||||||||| |||||||||||||||||   || ||||||||||||||||||||    
T  43403821 aagaactcatt-gatagtggattggagagattaatctctcctccagagtaggtca 43403768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 5434046 - 5433971
Alignment:
Q  109 ttggtgagattggga--aaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc 182  Q
    |||||||||||||||  ||  ||||||||||||||||||||| | |||| | |  | |||||||||||||||||||    
T  5434046 ttggtgagattgggagaaaatggtagaaattagggtttgttctttgtgagcttgttaaagctaatttcttgtaacc 5433971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 27305777 - 27305733
Alignment:
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaa 256  Q
    ||||||||||||||||||  ||| |||||||||| ||||||||||    
T  27305777 tgatagtggattggagagatcaatctctcctccaaagtaggtcaa 27305733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 46173457 - 46173505
Alignment:
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  46173457 ttgatagtggattggagagatcaatctctcccccagattaggtcaagtt 46173505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 46860574 - 46860618
Alignment:
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    |||||||||||||||||||  ||| || |||||||||||||||||    
T  46860574 ttgatagtggattggagagatcaatctttcctccagagtaggtca 46860618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 53921616 - 53921523
Alignment:
Q  164 aagctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||| |  ||||| || |||||| ||||||||| |||||||||||||||||||  ||| |||||| || |||||| |||||||    
T  53921616 aagctaatttcttgtaactcatttgta-tcattttgt-aagaactca-ttgatagtggattggagagatcaatctctcccccggagtagatcaagtt 53921523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 255
Target Start/End: Complemental strand, 55302040 - 55301996
Alignment:
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    |||||||||||||||||||  ||| |||||||||| |||||||||    
T  55302040 ttgatagtggattggagagatcaatctctcctccatagtaggtca 55301996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 6594822 - 6594578
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6594822 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 6594723  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6594722 gagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttg 6594624  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6594623 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 6594578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 6592604 - 6592360
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6592604 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 6592505  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6592504 gagattgggaaatgggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttg 6592406  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6592405 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 6592360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 18389024 - 18388780
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18389024 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 18388925  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18388924 gagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttg 18388826  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  18388825 atagtggattggagagtacaatctctcctccagagtaggtcaagtt 18388780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 18392460 - 18392216
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18392460 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 18392361  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18392360 gagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttg 18392262  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  18392261 atagtggattggagagtacaatctctcctccagagtaggtcaagtt 18392216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 32060590 - 32060342
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgt--agagagaatcattgagtgtcttg 111  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  32060590 caaagggtaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttg 32060491  T
Q  112 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattcc--ttttgtaaagaactca 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  32060490 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttgtatcccctttttgtaaagaactca 32060392  T
Q  210 tttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32060391 tttgatagtggattggagagtacaatctctcctccagagtaggtcaagtt 32060342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 20343811 - 20344045
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgt--agagagaatcattgagtgtcttggtgagattggg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  20343811 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttggtgagattggg 20343910  T
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggat 222  Q
    ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  20343911 aaaagggtagaaattagggtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactcatttgatagtggat 20344008  T
Q  223 tggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||| ||||||||||||||||||||||||    
T  20344009 tggagagtacaatctctcctccagagtaggtcaagtt 20344045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 24789755 - 24789989
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagag--aatcattgagtgtcttggtgagattggg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||    
T  24789755 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcattgagtgtcttggtaagattggg 24789854  T
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtgga 221  Q
    ||| ||||| |||||||||||||||||| |||||| ||||| |||||||||||||||||| | |||||| ||||||||||| ||||| ||||||||||||    
T  24789855 aaaagggtaaaaattagggtttgttcattgtgaac-ttgtcaaagctaatttcttgtaacattttgtatcccttttgtaaa-aactc-tttgatagtgga 24789951  T
Q  222 ttggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  24789952 ttggagagtactatctctcctccagagtaggtcaagtt 24789989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 1562268 - 1562103
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1562268 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 1562169  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaa 180  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1562168 gagattgggaaaagggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaa 1562103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 39731283 - 39731517
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggtgagattgg 121  Q
    |||||||||||||||| ||||||||||||  ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||||||||||||    
T  39731283 ctctagggtttagggt-ctttgattagagcttctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttggtgagattgg 39731381  T
Q  122 gaaaggggtagaaattagggtttgttcatagtgaacattgtca-agctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttgatagtg 219  Q
     ||| ||||||||||||||| |||||| | |||||| |||||| | ||||||||||||||| || ||||||  ||||||| ||||||||| |||||||||    
T  39731382 aaaaagggtagaaattaggg-ttgttctttgtgaac-ttgtcagatctaatttcttgtaactcttttgtatctcttttgt-aagaactca-ttgatagtg 39731477  T
Q  220 gattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  39731478 gattggagagttcaatctctcctccagagtaggtcaagtt 39731517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 43504409 - 43504174
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggtgagattgg 121  Q
    ||||||||||||| || ||||||||||||  |||||||| |||  ||||||||||||||||||| ||||||||  |||| ||||||||||||||||||||    
T  43504409 ctctagggtttagagt-ctttgattagagcttctcttggcttgggaaacatgggaaacaccttgaagagagaaaatcatcgagtgtcttggtgagattgg 43504311  T
Q  122 gaaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaa--cctcttgtattccttttgtaaagaactcatttgatagt 218  Q
    |||| ||||||||||||||| |||||||| |||||| ||||| || ||||||||||||||  | | ||||||  ||||||| ||||||||| ||||||||    
T  43504310 gaaaagggtagaaattaggg-ttgttcattgtgaac-ttgtcaaatctaatttcttgtaactctttttgtatctcttttgt-aagaactca-ttgatagt 43504215  T
Q  219 ggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    | |||||||||| ||| |||||||||| |||||||||||||    
T  43504214 gaattggagagttcaatctctcctccatagtaggtcaagtt 43504174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 25767215 - 25766980
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggt----gagat 118  Q
    |||||||||||||||| ||||||||||||| |||||| ||    |||||| | ||||||||||  ||| |||  ||||||||||||||| |    |||||    
T  25767215 ctctagggtttagggt-ctttgattagagtttctctttggg---aaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattgagat 25767120  T
Q  119 tgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgata 216  Q
    ||| |||  ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| ||| | |  || || | ||||||||||| ||||    
T  25767119 tggaaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaaccccttttgtatctcttttgaagaactcatt-gata 25767023  T
Q  217 gtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||| ||| ||||||||||||||||||||||||    
T  25767022 gtggattggagagttcaatctctcctccagagtaggtcaagtt 25766980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 35853825 - 35854062
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| |||||||| |||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  35853825 tagggtttagggt-ctttgatttgagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 35853922  T
Q  118 ttgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttga 214  Q
    ||||||||  ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  |||| |||| ||||||||| ||    
T  35853923 ttgggaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaa-gaactcatt-ga 35854017  T
Q  215 tagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  35854018 tagtggattggagagttcaatctctcctccagagtaggtcaagtt 35854062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 1560757 - 1560686
Alignment:
Q  187 gtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1560757 gtatcccttttgtaa-gaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtt 1560686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 48408709 - 48408952
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtg 114  Q
    |||||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       |||    
T  48408709 ctctagggtttagggt-ctttgattagagtttctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtg 48408807  T
Q  115 agattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacctctt--gtattccttttgtaaagaactcat 210  Q
    |||||||||||  ||||||||||||  ||| |||| | || ||| ||||||| ||||||||||||||||| |||  ||||  |||||| ||| |||||||    
T  48408808 agattgggaaaaagggtagaaattaatgtt-gttctttgtaaac-ttgtcaaagctaatttcttgtaaccccttttgtatctcttttg-aaataactcat 48408904  T
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    | ||||||||||||||||||  || ||||||||||||||| ||||||||    
T  48408905 t-gatagtggattggagagtttaatctctcctccagagtatgtcaagtt 48408952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 29990965 - 29991201
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  29990965 tagggtttagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 29991062  T
Q  118 ttgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttgat 215  Q
    |||||||| || |||||||||||||| |||  | |||||| ||||||| ||||||||||||||||| | ||||||  ||||    || |||||||| |||    
T  29991063 ttgggaaaaggatagaaattagggtt-gttatttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctctttct--aataactcatt-gat 29991157  T
Q  216 agtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||    
T  29991158 agtggattggagagatcaatctctcctccagagtaggtcaagtt 29991201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 34310884 - 34310736
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaac-ctcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||  ||||||||||||||||| |||| | ||||| |||||  |||||||||||||||||| |  ||||| || |||||| |||||    
T  34310884 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgaa-attgttgaagctaatttcttgtaacacatttgta-tctttttgt-aagaa 34310789  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||| |||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  34310788 ctca-ttgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 34310736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 259
Target Start/End: Original strand, 25615785 - 25616001
Alignment:
Q  41 tctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgt---agagagaatcattgagtgtcttggtgagattgggaaag-gggtagaaa 135  Q
    |||||||||||||| |||||||||||| ||||||| | ||||||||||    ||||| |||||||||||||||||   |||||||||||  |||||||||    
T  25615785 tctttgattagagt-tctcttgggttggaaaacattgtaaacaccttgggtgagagaaaatcattgagtgtcttg---agattgggaaaatgggtagaaa 25615880  T
Q  136 ttagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaactcatttgatagtggattggagagtacaa 234  Q
    ||||| |||||||   |||  | |  | |||||||||||||||||||  || |||| | |||||||| ||||||||| ||||||||||| |||||  |||    
T  25615881 ttagg-tttgttctatgtgcgcttgtttaagctaatttcttgtaacccatttgtat-cattttgtaa-gaactcatt-gatagtggattagagagatcaa 25615976  T
Q  235 actctcctccagagtaggtcaagtt 259  Q
     ||||||||||||||||||||||||    
T  25615977 tctctcctccagagtaggtcaagtt 25616001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 4178685 - 4178921
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  4178685 tagggtttagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 4178782  T
Q  118 ttgggaaagg-ggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttgat 215  Q
    ||||||||   |||||||||||||||| |||| | |||||| | |  ||||||||||||||||||| | ||||||  ||||    ||||||||||| |||    
T  4178783 ttgggaaaaaaggtagaaattagggtt-gttctttgtgaacttgggaaagctaatttcttgtaacccttttgtatctctttg---aagaactcatt-gat 4178877  T
Q  216 agtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||| | ||| ||| ||||||||||||| ||||||||||    
T  4178878 agtggattgaacagttcaatctctcctccagagcaggtcaagtt 4178921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 23555039 - 23555188
Alignment:
Q  109 ttggtgagattgggaaagg--ggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattcct-tttgtaaaga 204  Q
    |||||||||||||||||    |||||||||||||||| |||| | |||||| |  | |||||||||||||||||| || |||||  ||| ||||||| ||    
T  23555039 ttggtgagattgggaaaaaatggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacacttttgta--cctctttgtaa-ga 23555134  T
Q  205 actcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  23555135 actcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 23555188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 48491579 - 48491727
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||||| |  | |||||||||||||||||||  || ||||  ||||   |||||||    
T  48491579 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg--aaagaac 48491675  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  48491676 tcatt-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 48491727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 22269973 - 22270121
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||| | |  | |||||||||||||||||||  || ||||  |||| |||| ||||    
T  22269973 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaa-gaac 22270069  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    | ||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  22270070 tgatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 22270121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 32358131 - 32358074
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  32358131 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 32358074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 14070001 - 14069853
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaa-cctcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||| ||  ||||| ||  ||||| |||||    
T  14070001 ttggtgagattgggaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccatttgta-tctctttgt-aagaa 14069906  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||| |||||||||||||||||||  ||| |||||| | ||| |||||||||||    
T  14069905 ctca-ttgatagtggattggagagatcaatctctccccaagattaggtcaagtt 14069853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 14380029 - 14379881
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaa-cctcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||| ||  ||||| ||  ||||| |||||    
T  14380029 ttggtgagattgggaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccatttgta-tctctttgt-aagaa 14379934  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||| |||||||||||||||||||  ||| |||||| | ||| |||||||||||    
T  14379933 ctca-ttgatagtggattggagagatcaatctctcccctagattaggtcaagtt 14379881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 41317602 - 41317454
Alignment:
Q  109 ttggtgagattgggaaagg-ggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaa-cctcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||   |||||||||||||||| |||| | |||| | ||||||| ||||||||||||||| ||  |||||| ||||| |||| |||    
T  41317602 ttggtgagattgggaaaattggtagaaattagggtt-gttctttgtgagc-ttgtcaaagctaatttcttgtaatccatttgtatcccttt-gtaa-gaa 41317507  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||| |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  41317506 ctcatt-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 41317454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 3259095 - 3259143
Alignment:
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  3259095 ttgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 3259143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 259
Target Start/End: Original strand, 19502233 - 19502326
Alignment:
Q  164 aagctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||| || ||||| ||  ||||| ||||||||| |||||||||||||||||||  ||| ||||||||||||||| ||||||||    
T  19502233 aagctaatttcttgtaactcttttgta-tctctttgt-aagaactca-ttgatagtggattggagagatcaatctctcctccagagtaagtcaagtt 19502326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 29608737 - 29608885
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||| | |  | |||||||||||||||||| |  ||||||  |||| |||| ||||    
T  29608737 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaa-gaac 29608833  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| ||||||||||||||||   ||| | ||||||||||||||||||||||    
T  29608834 tcatt-gatagtggattggagatatcaatcactcctccagagtaggtcaagtt 29608885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 30024900 - 30024752
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||| ||||  ||||||||||||||||| |||||| |||| | |  | |||||||||||||||||||  || ||||  |||| |||| ||||    
T  30024900 ttggtgagattgagaaaatgggtagaaattagggtt-gttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaa-gaac 30024804  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    || ||||||||||||||||||||  ||| | |||| |||||||||||||||||    
T  30024803 tc-tttgatagtggattggagagatcaatcactcccccagagtaggtcaagtt 30024752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 8359393 - 8359340
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||    
T  8359393 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtca 8359340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 2390385 - 2390430
Alignment:
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||    
T  2390385 atagtggattggagagatcaatctctcctccagagtaggtcaagtt 2390430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 256
Target Start/End: Complemental strand, 4253697 - 4253551
Alignment:
Q  109 ttggtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtat-tccttttgtaaagaact 207  Q
    ||||||| ||||| |||  ||||||||||||||||||||| | |||| | |  | ||||||||||| ||||||| ||| ||| ||  |||| ||||||||    
T  4253697 ttggtgaaattggtaaaatggtagaaattagggtttgttctttgtgagcttgttgaagctaatttcatgtaacc-cttttatatctctttggaaagaact 4253599  T
Q  208 catttgatagtggattggagagtacaaactctcctccagagtaggtcaa 256  Q
    || |||||| |||||| |||||  ||| ||||||  |||||||||||||    
T  4253598 ca-ttgataatggattagagagatcaatctctcccacagagtaggtcaa 4253551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 6432071 - 6432119
Alignment:
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||  ||| ||||||| ||||||||||||||||    
T  6432071 ttgatagtggattggagagatcaatctctccttcagagtaggtcaagtt 6432119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 8153342 - 8153490
Alignment:
Q  109 ttggtgagattgggaaaggg-gtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaac-ctcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||  | ||||||||||||||| |||| | ||||  |||||||| |||||||||||||||| |  ||||||  |||| ||||  ||    
T  8153342 ttggtgagattgggaaaatgagtagaaattagggtt-gttctttgtgag-attgtcaaagctaatttcttgtaactcatttgtatctcttt-gtaat-aa 8153437  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||| |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  8153438 ctcatt-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 8153490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 182
Target Start/End: Original strand, 23343975 - 23344048
Alignment:
Q  109 ttggtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc 182  Q
    ||||||||||| ||||| |||||||||||| ||||| ||| | |||| | |  | |||||||||||||||||||    
T  23343975 ttggtgagatttggaaaagggtagaaattaaggtttattctttgtgagcttgttgaagctaatttcttgtaacc 23344048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 48599502 - 48599354
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaac 206  Q
    ||||||| |||||||||  ||||||||||||||||| |||| | |||| | |  | |||||||||||||||||| |  ||||||  |||| |  |||| |    
T  48599502 ttggtgatattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgg--aagagc 48599406  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| ||||||||||||| || |||||||    
T  48599405 tcatt-gatagtggattggagagatcaatctctcctccagagcagatcaagtt 48599354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 259
Target Start/End: Complemental strand, 41649158 - 41649031
Alignment:
Q  128 ggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaactcatttgatagtggattgga 226  Q
    ||||||||||||| ||||||| | |||| | ||||  ||||||||||||||||||  || |||| ||||| |||| ||||||||| ||||||||||||||    
T  41649158 ggtagaaattagg-tttgttctttgtgagc-ttgtttagctaatttcttgtaacccatttgtatcccttt-gtaa-gaactcatt-gatagtggattgga 41649064  T
Q  227 gagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||  ||| |||||| ||| | |||||||||||    
T  41649063 gagatcaatctctcccccaaattaggtcaagtt 41649031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 3990 - 3746
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3990 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 3891  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3890 gagattgggaaaggggtagaaattagggtttgttcatagtgaaca-tgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 3792  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  3791 atagtggattggagagttcaatctctcctccagagtaggtcaagtt 3746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 2868 - 2624
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2868 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 2769  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2768 gagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttg 2670  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  2669 atagtggattggagagtacaatctctcctccagagtaggtcaagtt 2624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 12647650 - 12647406
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12647650 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 12647551  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12647550 gagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttg 12647452  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  12647451 atagtggattggagagtacaatctctcctccagagtaggtcaagtt 12647406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 6266605 - 6266839
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagag--aatcattgagtgtcttggtgagattggg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  6266605 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcattgagtgtcttggtgagattggg 6266704  T
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtgga 221  Q
    ||| |||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||    
T  6266705 aaaagggtagaaattagggtttgttcattgtgaac-ttgtcaaatctaatttcttgtaaccttttgtatcccttttgt-aagaactc-tttgatagtgga 6266801  T
Q  222 ttggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  6266802 ttggagagtacaatctctcctccagagtaggtcaagtt 6266839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 88 - 259
Target Start/End: Complemental strand, 13656221 - 13656052
Alignment:
Q  88 tagagagaatcattgagtgtcttggtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttg 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13656221 tagagagaatcattgagtgtcttggtgagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttg 13656123  T
Q  188 tattccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13656122 tatcccttttgt-aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtt 13656052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 32289479 - 32289712
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggtt-gaaaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggtgagattgg 121  Q
    ||||||||||||| || ||||||||||||  ||||||||||| | |||||||| ||||||||||  ||| |||  ||||||||||||||||||||||| |    
T  32289479 ctctagggtttagagt-ctttgattagagcttctcttgggtttggaaacatggtaaacaccttggtgagtgaaaatcattgagtgtcttggtgagatt-g 32289576  T
Q  122 gaaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttgatagtg 219  Q
    |||| ||||||||||||||| |||||| | |||||| ||||| || ||||||||||||||| || ||||||  ||||||| ||||||||| ||||||||     
T  32289577 gaaaagggtagaaattaggg-ttgttctttgtgaac-ttgtcaaatctaatttcttgtaactcttttgtatctcttttgt-aagaactca-ttgatagta 32289672  T
Q  220 gattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
     ||| |||||  ||| ||||||||||||||||||||||||    
T  32289673 aattagagagatcaatctctcctccagagtaggtcaagtt 32289712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 4484592 - 4484350
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagag--aatcattgagtgtcttg------gtga 115  Q
    |||||||||||||||| ||||||||||||  ||||||||||||  |||||| | ||||||||||  ||| |  |||||||||||||||||      ||||    
T  4484592 ctctagggtttagggt-ctttgattagagcttctcttgggttgggaaacattgtaaacaccttggtgagtgtaaatcattgagtgtcttgttcttggtga 4484494  T
Q  116 gattggga--aaggggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatt 211  Q
     |||||||  || ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  ||||||||| |||||||||    
T  4484493 aattgggagaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctcttttgtaa-gaactcatt 4484397  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
     |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  4484396 -gatagtggattggagagttcaatctctcctccagagtaggtcaagtt 4484350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 30833252 - 30833494
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagag--aatcattgagtgtcttg------gtga 115  Q
    ||||||||||||||||| |||||||||||  | ||||||||||  |||||| | |||||| |||  ||| |  |||||||||||||||||      ||||    
T  30833252 ctctagggtttagggtt-tttgattagagcttatcttgggttgggaaacattgtaaacactttggtgagtgtaaatcattgagtgtcttgttcttggtga 30833350  T
Q  116 gattggga--aaggggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatt 211  Q
    ||||||||  || ||||||||||||||||| |||| | |||||| ||||||| | ||||||||||||||| | ||||||  ||||||||| |||||||||    
T  30833351 gattgggagaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagttaatttcttgtaacccttttgtatctcttttgtaa-gaactcatt 30833447  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
     |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  30833448 -gatagtggattggagagttcaatctctcctccagagtaggtcaagtt 30833494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 45099665 - 45099902
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  45099665 tagggtttagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 45099762  T
Q  118 ttgggaaag--gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||   ||||||||||||||||| |||| | |||||| ||||||| |||||||||||||||| || ||||||  ||||    ||||||||||| |    
T  45099763 ttgggaaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaactcttttgtatctctttg---aagaactcatt-g 45099856  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  45099857 atagtggattggagagttcaatctctcctccagagtaggtcaagtt 45099902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 4503390 - 4503153
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttggt-------gaga 117  Q
    ||||||||||| ||||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  ||||||||||||||| |       ||||    
T  4503390 tagggtttagg-ttctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggagaga 4503293  T
Q  118 ttgggaaagg--ggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttg 213  Q
    ||||||||    |||||||||||||||| |||| | |||||| ||||||| |||||||||||||||| || ||||||  ||||    ||||||||||| |    
T  4503292 ttgggaaaaaatggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaactcttttgtatctctttg---aagaactcatt-g 4503199  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  4503198 atagtggattggagagttcaatctctcctccagagtaggtcaagtt 4503153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 36205921 - 36205685
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtc-------ttggtgaga 117  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||||| ||||||||||  ||| |||  ||||||||||||       |||||||||    
T  36205921 tagggtttagggt-ctttgattagagt-tctcttgggttgggaaacatggtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 36205824  T
Q  118 ttggg-aaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttga 214  Q
    ||||| |||  |||||||||||||| |||||| | |||||| ||||| |||||||||||||||||| || ||||||  |||   | ||||||||| ||||    
T  36205823 ttgggaaaaatggtagaaattaggg-ttgttctttgtgaac-ttgtcaaagctaatttcttgtaactcttttgtatctctt---tgaagaactca-ttga 36205730  T
Q  215 tagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
     || |||||||||||| ||| || |||||||||||||||||||||    
T  36205729 cagcggattggagagttcaatctatcctccagagtaggtcaagtt 36205685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 259
Target Start/End: Complemental strand, 5723512 - 5723276
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    |||||||| |||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||       ||||||    
T  5723512 tagggtttggggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 5723415  T
Q  118 ttgggaaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttgat 215  Q
    ||| |||| |||||||||||| || |||||| | |||||| ||||| ||||||||||||||||||| | ||||| ||  ||||| ||||||||| |||||    
T  5723414 ttgagaaaagggtagaaatta-ggcttgttctttgtgaac-ttgtcaaagctaatttcttgtaacctttttgta-tctctttgt-aagaactca-ttgat 5723320  T
Q  216 agtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||  ||| |||||||| ||||||||| |||||    
T  5723319 agtggattggagagatcaatctctcctctagagtaggttaagtt 5723276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 255
Target Start/End: Original strand, 33648176 - 33648316
Alignment:
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc-tcttgtattccttttgtaaagaactcattt 212  Q
    ||||||| ||||  |||| |||||||||||||||| | |||| | |  | ||||||||||| ||||||| | ||||||| |||| ||||||||||||||     
T  33648176 gagattgagaaaatggtaaaaattagggtttgttctttgtgagcttgttgaagctaatttcctgtaacccttttgtatttcttt-gtaaagaactcatt- 33648273  T
Q  213 gatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    ||||| |||||||||||  ||| ||||||||||||||||||||    
T  33648274 gatagcggattggagagatcaatctctcctccagagtaggtca 33648316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 2334586 - 2334438
Alignment:
Q  109 ttggtgagattggg-aaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaac 206  Q
    |||||||||||||| ||| |||||||||| |||| |||||| | |||||| |  | |||||||||||| ||||| || ||||| ||  ||||| ||||||    
T  2334586 ttggtgagattgggaaaatgggtagaaataaggg-ttgttctttgtgaacttgttgaagctaatttctagtaactcttttgta-tctctttgt-aagaac 2334490  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||| |||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  2334489 tca-ttgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 2334438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 45726929 - 45727077
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||| ||| |||| | |||| | |  | |||||||||||||||||||| || ||||  |||| |||| ||||    
T  45726929 ttggtgagattgggaaaatgggtagaaattagagtt-gttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctcttt-gtaa-gaac 45727025  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  45727026 tcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 45727077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 259
Target Start/End: Complemental strand, 34140017 - 34139790
Alignment:
Q  41 tctttgattagagtatctcttgggttga-aaacatgggaaacaccttgt---agagagaatcattgagtgtcttg-------gtgagattgggaaag-gg 128  Q
    |||||||||||||| ||||||||||||  |||||| | ||||||||||    || || |||||||||||||||||       ||||||||| ||||  ||    
T  34140017 tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgagaaaatgg 34139919  T
Q  129 gtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctct-tgtattccttttgtaaagaactcatttgatagtggattggag 227  Q
    ||||||||||||||| |||| | |||| | |  | |||||||||||||||||||  | ||||| |||||||||| ||||||||| |||||||||||||||    
T  34139918 gtagaaattagggtt-gttctttgtgagcttgtttaagctaatttcttgtaacccatatgtatcccttttgtaa-gaactcatt-gatagtggattggag 34139822  T
Q  228 agtacaaactctcctccagagtaggtcaagtt 259  Q
    ||  ||| |||||| ||||| |||||||||||    
T  34139821 agatcaatctctcccccagattaggtcaagtt 34139790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 259
Target Start/End: Complemental strand, 6595154 - 6595026
Alignment:
Q  128 ggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggag 227  Q
    |||||||||||||||| |||| | |||||| |  | |||||||||||||||||||  ||  | ||  ||||||| |||||| || |||||||||||||||    
T  6595154 ggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacccttttgaatctctttgtaa-gaactcgtt-gatagtggattggag 6595058  T
Q  228 agtacaaactctcctccagagtaggtcaagtt 259  Q
    ||  ||| ||||||||||||||||||||||||    
T  6595057 agatcaatctctcctccagagtaggtcaagtt 6595026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 36988153 - 36988096
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  36988153 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 36988096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 29867869 - 29868017
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaa-cctcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||| ||  ||||| ||  ||||| |||||    
T  29867869 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccatttgta-tctctttgt-aagaa 29867964  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||| ||||||||||||||||||||  ||| |||||| ||| | |||||||||||    
T  29867965 ctc-tttgatagtggattggagagatcaatctctcccccaaattaggtcaagtt 29868017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 14633939 - 14633845
Alignment:
Q  164 aagctaatttcttgtaacctctt-gtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||  || |||| |||||||||| ||||||||  |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  14633939 aagctaatttcttgtaacccatttgtatcccttttgtaa-gaactcata-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 14633845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 42362262 - 42362500
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgt---agagagaatcattgagtgtcttg-------gtgag 116  Q
    ||||||| ||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||    || || |||||||||||||||||       |||||    
T  42362262 tagggttgagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgag 42362359  T
Q  117 attgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaactcatttga 214  Q
    |||||||||  |||||||||||||| ||||||| | |||| | |  | |||||||||||||||||||  || |||| ||||| |||| ||||||||| ||    
T  42362360 attgggaaaatgggtagaaattagg-tttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt-gtaa-gaactcatt-ga 42362455  T
Q  215 tagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||  | | |||||| ||||| |||||||||||    
T  42362456 tagtggattggagagatctatctctcccccagattaggtcaagtt 42362500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 1631809 - 1631752
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| ||||||||||||||||   ||| ||||||||||||||||||||||||    
T  1631809 aagaactcatt-gatagtggattggagaaatcaatctctcctccagagtaggtcaagtt 1631752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 255
Target Start/End: Original strand, 24398055 - 24398202
Alignment:
Q  109 ttggtgagattgggaa--aggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc-tcttgtattccttttgtaaagaa 205  Q
    |||||||||||| |||  | |||||||| ||| ||||||||| | |||| | |  | ||||||||||||||||||| | ||||||  |||| ||||||||    
T  24398055 ttggtgagattgtgaagaaagggtagaagttaaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttgtatctcttt-gtaaagaa 24398153  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    |||||| |||| ||||||||||||  ||| |||||| ||| |||||||||    
T  24398154 ctcatt-gataatggattggagagatcaatctctcccccatagtaggtca 24398202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 35446961 - 35446904
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||  ||||||||||||||||||||||||    
T  35446961 aagaactcatt-gatagtggattggagagatcactctctcctccagagtaggtcaagtt 35446904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 259
Target Start/End: Complemental strand, 723893 - 723764
Alignment:
Q  127 gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaactcatttgatagtggattgg 225  Q
    |||||||||||||| ||||||| | |||| | |  | |||||||||||||||||||  || |||| ||||| |||| ||||||||| |||||||||||||    
T  723893 gggtagaaattagg-tttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt-gtaa-gaactcatt-gatagtggattgg 723798  T
Q  226 agagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||  ||| |||||| ||||| |||||||||||    
T  723797 agagatcaatctctcccccagattaggtcaagtt 723764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 183
Target Start/End: Original strand, 13121769 - 13121843
Alignment:
Q  109 ttggtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacct 183  Q
    ||||||||| |||||||  ||||||||||||||||||||| | |||| | |  | ||| ||||||||||||||||    
T  13121769 ttggtgagactgggaaaatggtagaaattagggtttgttctttgtgagcttgttgaagataatttcttgtaacct 13121843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 17057446 - 17057389
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  17057446 aagaactcatt-gatagtggattggagagatcaatctctcccccagactaggtcaagtt 17057389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 17085429 - 17085372
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  17085429 aagaactcatt-gatagtggattggagagatcaatctctcccccagactaggtcaagtt 17085372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 39284936 - 39284984
Alignment:
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  39284936 ttgatagtggattggagagatcaatctctcccccagattaggtcaagtt 39284984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 230; Significance: 1e-127; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 44203536 - 44203780
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44203536 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 44203635  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44203636 gagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaacctcttgtatcccttttgtaaagaactcatttg 44203734  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  44203735 atagtggattggagagtacaatctctcctccagagtaggtcaagtt 44203780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 9036320 - 9036564
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgt--agagagaatcattgagtgtcttg 111  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9036320 caaaggggcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaaagagagaatcattgagtgtcttg 9036419  T
Q  112 gtgagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatt 211  Q
    |||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| |||||||| ||    
T  9036420 gtgagattgggaaaagggtagaaattagggtttgttcattgtgaac-ttgtcaagctaatttcttgtaaccttttgtatcccttttgt-aagaactc-tt 9036516  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  9036517 tgatagtggattgaagagtacaatctctcctcgagagtaggtcaagtt 9036564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 40282291 - 40282525
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagag--aatcattgagtgtcttggtgagattggg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  40282291 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcattgagtgtcttggtgagattggg 40282390  T
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtgga 221  Q
    ||| ||||||||||||||||| |||||| |||||| ||||| || ||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||    
T  40282391 aaaagggtagaaattagggttagttcattgtgaac-ttgtctaatctaatttcttgtaaccttttgtatcccttttgt-aagaactc-tttgatagtgga 40282487  T
Q  222 ttggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  40282488 ttggagagtacaatctctcctccagagtaggtcaagtt 40282525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 21053872 - 21054106
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagag--agaatcattgagtgtcttggtgagattggg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||    
T  21053872 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagaaaaaatcattgagtgtcttggtgagattggg 21053971  T
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtgga 221  Q
    ||| | |||||||||||||||||||||| |||||| ||||| || ||||||||||| ||||| |||||| |||||||| |||||||| ||||||||||||    
T  21053972 aaaagtgtagaaattagggtttgttcattgtgaac-ttgtcaaatctaatttcttgcaaccttttgtatcccttttgt-aagaactc-tttgatagtgga 21054068  T
Q  222 ttggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21054069 ttggagagtacaaactctcctccagagtaggtcaagtt 21054106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 9987116 - 9987349
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagag--aatcattgagtgtcttggtgagattggg 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  9987116 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaaaatcattgagtgtcttggtgagattggg 9987215  T
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtgga 221  Q
    ||| ||||||||||||||| |||||||| |||||| ||||| || ||||||||||| ||||| |||||| |||||||  ||||||||| |||||||||||    
T  9987216 aaaagggtagaaattaggg-ttgttcattgtgaac-ttgtctaatctaatttcttgcaaccttttgtatcccttttg-caagaactca-ttgatagtgga 9987311  T
Q  222 ttggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  9987312 ttggagagtacaatctctcctccagagtaggtcaagtt 9987349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 20622492 - 20622257
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtaga--gagaatcattgagtgtcttggtgagattggg 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||||||    
T  20622492 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagggaaaatcattgactgtcttggtgagattggg 20622393  T
Q  123 aaaggggtagaaattagggtttgttcatagtgaacattgtc-aagctaatttcttgtaacctcttgtattccttttgt-aaagaactcatttgatagtgg 220  Q
    ||| ||||||||||||||| |||||||| |||||| ||||| || ||||||||||||||||| |||||| |||||| |  |||||||| |||||||||||    
T  20622392 aaaagggtagaaattaggg-ttgttcattgtgaac-ttgtcaaatctaatttcttgtaaccttttgtatcccttttttgtaagaactc-tttgatagtgg 20622296  T
Q  221 attggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  20622295 attggagagtacaatctctcctccagagtaggtcaagtt 20622257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 259
Target Start/End: Complemental strand, 13316521 - 13316372
Alignment:
Q  108 cttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaaga 204  Q
    ||||||||||||||||||  ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  |||| |  ||||    
T  13316521 cttggtgagattgggaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctctttgg--aaga 13316426  T
Q  205 actcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  13316425 actcatt-gatagtggattggagagttcaatctctcctccagagtaggtcaagtt 13316372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 259
Target Start/End: Original strand, 51765302 - 51765545
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagag--aatcattgagtgtcttg------gtgag 116  Q
    |||||||||||||||| ||||||||||||  |||||||||||| |||||| | ||||||||||  ||| |  |||||||||||||||||      ||  |    
T  51765302 ctctagggtttagggt-ctttgattagagcttctcttgggttggaaacattgtaaacaccttggtgagtgtaaatcattgagtgtcttgttcttggtttg 51765400  T
Q  117 attggga--aaggggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacctctt--gtattccttttgtaaagaactcatt 211  Q
    |||||||  || |||||||||||||||||    | | |||||| ||||||| ||||||||||||||||| |||  ||||  ||||||||| |||||||||    
T  51765401 attgggagaaaagggtagaaattagggttgtacctttgtgaac-ttgtcaaagctaatttcttgtaaccccttttgtatctcttttgtaa-gaactcatt 51765498  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
     |||||||||||||||||| ||| ||||||||||||||||| ||||||    
T  51765499 -gatagtggattggagagttcaatctctcctccagagtaggacaagtt 51765545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 37168297 - 37168446
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc--tcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||| | |  | |||||||||||||||||||  | ||||||  |||| |||| |||    
T  37168297 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctcttt-gtaa-gaa 37168393  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  37168394 ctcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 37168446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 259
Target Start/End: Complemental strand, 8550952 - 8550807
Alignment:
Q  112 gtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaactca 209  Q
    ||||||||||||||  |||||||||||||| ||||||| | |||| | |  | |||||||||||||||||| |  ||||| ||| ||||| |||||||||    
T  8550952 gtgagattgggaaaatgggtagaaattagg-tttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgta-tccctttgt-aagaactca 8550856  T
Q  210 tttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
     |||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  8550855 -ttgatagtggattggagagatcaatctctcctccagagtaggtcaagtt 8550807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 20762582 - 20762820
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  ||||||||| |||||       ||||||    
T  20762582 tagggtttagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtatcttgttcattggtgaga 20762679  T
Q  118 ttgggaaag--gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttg 213  Q
    ||| ||||   ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  || ||   ||||||||||| |    
T  20762680 ttgagaaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtat--ctcttcgtaagaactcatt-g 20762774  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||  ||| ||||||| ||||||||||||||||    
T  20762775 atagtggattggagagatcaatctctcctacagagtaggtcaagtt 20762820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 3189330 - 3189478
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaac 206  Q
    ||||||||||| |||||  ||||| ||||||||||| |||| | |||||| |  | ||||||||||| |||||| || |||||| | |||||||| ||||    
T  3189330 ttggtgagatttggaaaaagggtataaattagggtt-gttctttgtgaacttgttgaagctaatttcctgtaactcttttgtat-ctttttgtaa-gaac 3189426  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| ||||| ||||||||||||||||||    
T  3189427 tcatt-gatagtggattggagagatcaatctctcatccagagtaggtcaagtt 3189478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 3198147 - 3198295
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaac 206  Q
    ||||||||||| |||||  ||||| ||||||||||| |||| | |||||| |  | ||||||||||| |||||| || |||||| | |||||||| ||||    
T  3198147 ttggtgagatttggaaaaagggtataaattagggtt-gttctttgtgaacttgttgaagctaatttcctgtaactcttttgtat-ctttttgtaa-gaac 3198243  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| ||||| ||||||||||||||||||    
T  3198244 tcatt-gatagtggattggagagatcaatctctcatccagagtaggtcaagtt 3198295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 3206986 - 3207134
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaac 206  Q
    ||||||||||| |||||  ||||| ||||||||||| |||| | |||||| |  | ||||||||||| |||||| || |||||| | |||||||| ||||    
T  3206986 ttggtgagatttggaaaaagggtataaattagggtt-gttctttgtgaacttgttgaagctaatttcctgtaactcttttgtat-ctttttgtaa-gaac 3207082  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| ||||| ||||||||||||||||||    
T  3207083 tcatt-gatagtggattggagagatcaatctctcatccagagtaggtcaagtt 3207134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 13547257 - 13547109
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||| | |  | |||||| ||||||||||||  || ||||  |||| |||| ||||    
T  13547257 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctattttcttgtaacccatttgtatctcttt-gtaa-gaac 13547161  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  13547160 tcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 13547109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 29136247 - 29136395
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    |||||||||||||||||  ||||||||||||||||| |||| | |||| | |  | |||||||||||||| ||||  || ||||| |||| |||| ||||    
T  29136247 ttggtgagattgggaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttggaacccatttgtatttcttt-gtaa-gaac 29136343  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| ||| |||||||||||||  ||| ||||||||||||||||||||||||    
T  29136344 tcatt-gatcgtggattggagagatcaatctctcctccagagtaggtcaagtt 29136395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 44455160 - 44455308
Alignment:
Q  109 ttggtgagattggg-aaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaac 206  Q
    |||||||||||||| ||| ||||||||||||||| |||||| | |||||| |  | || ||||||||||||||| |  ||||| || |||||| ||||||    
T  44455160 ttggtgagattgggaaaatgggtagaaattaggg-ttgttctttgtgaacttgttgaaactaatttcttgtaactcatttgta-tctttttgt-aagaac 44455256  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||| |||||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  44455257 tca-ttgatagtggattggagagatcaatctctcccccagattaggtcaagtt 44455308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 7482399 - 7482250
Alignment:
Q  109 ttggtgagattggg-aaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc--tcttgtattccttttgtaaagaa 205  Q
    |||||||||||||| ||| ||||||||||||||||| |||| | |||| | |  | |||||||||||||||||||  | ||||||  |||| |||| |||    
T  7482399 ttggtgagattgggtaaatgggtagaaattagggtt-gttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctcttt-gtaa-gaa 7482303  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||| ||||||| |||||||||  ||| ||||||| ||||||||||||||||    
T  7482302 ctcatt-gatagtgaattggagagatcaatctctccttcagagtaggtcaagtt 7482250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 11348789 - 11348846
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  11348789 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 11348846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 13549077 - 13549020
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  13549077 aagaactcatt-gatagtggattggagagatcaatctctcctccagagtaggtcaagtt 13549020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 28220394 - 28220246
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    ||||||||||| |||||  ||||||||||||||||| |||| | |||||| |  | |||||||||||||||||||  || ||||  |||| |||| ||||    
T  28220394 ttggtgagattcggaaaatgggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaa-gaac 28220298  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| |||||||||||||||||  ||| |||||| ||||| |||||||||||    
T  28220297 tcatt-gatagtggattggagagatcaatctctcccccagattaggtcaagtt 28220246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 255
Target Start/End: Complemental strand, 47255508 - 47255364
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaac 206  Q
    ||||||||||||| |||  ||||||||||||||||| |||| | |||| | |  | |||||||||||||||||||  || ||||  |||| |||| ||||    
T  47255508 ttggtgagattggaaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaa-gaac 47255412  T
Q  207 tcatttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    ||||| |||||||||||||||||  ||| ||||||||||||||||||||    
T  47255411 tcatt-gatagtggattggagagatcaatctctcctccagagtaggtca 47255364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 31925784 - 31925727
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| |||||||| |||||||||||||||    
T  31925784 aagaactcatt-gatagtggattggagagatcaatctctcctctagagtaggtcaagtt 31925727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 259
Target Start/End: Complemental strand, 834332 - 834187
Alignment:
Q  112 gtgagattgggaaagggg-tagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaactca 209  Q
    ||||||||||||||  || |||||||||||||| |||| | |||| | |  | |||||||||||||||||||  || |||| ||||| |||| |||||||    
T  834332 gtgagattgggaaaatggatagaaattagggtt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt-gtaa-gaactca 834236  T
Q  210 tttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    || |||||||||||||||||  | | |||||| |||||||||||||||||    
T  834235 tt-gatagtggattggagagatctatctctcccccagagtaggtcaagtt 834187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 6378603 - 6378655
Alignment:
Q  128 ggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac 181  Q
    |||||||||||||||||||||||  |||||||||| |||||||||| |||||||    
T  6378603 ggtagaaattagggtttgttcatgttgaacattgt-aagctaattttttgtaac 6378655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 4552750 - 4552657
Alignment:
Q  164 aagctaatttcttgtaacctctt-gtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||||| ||| |||| ||||| |||| ||||||||| |||| ||||||||||||  ||| ||||||  ||||||||||||||||    
T  4552750 aagctaatttcttgtaacccctttgtatcccttt-gtaa-gaactcatt-gataatggattggagagatcaatctctccctcagagtaggtcaagtt 4552657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 22079371 - 22079461
Alignment:
Q  164 aagctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    ||||||||||||||||||| | ||||||  |||| |||||||||||||| |||| ||||||||||||  |||  ||||||||| |||||||||    
T  22079371 aagctaatttcttgtaaccattttgtatctcttt-gtaaagaactcatt-gatattggattggagagatcaatttctcctccaaagtaggtca 22079461  T

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Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 259
Target Start/End: Complemental strand, 28265702 - 28265574
Alignment:
Q  128 ggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctctt-gtattccttttgtaaagaactcatttgatagtggattgga 226  Q
    |||||||||||||||| |||||| |||| | |  | |||||||||||||||||||  || ||||  |||| |||| |||||| |||||||||||||||||    
T  28265702 ggtagaaattagggtt-gttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt-gtaa-gaactc-tttgatagtggattgga 28265607  T
Q  227 gagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||  ||| |||||| ||||| |||||||||||    
T  28265606 gagatcaatctctcccccagattaggtcaagtt 28265574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 5459961 - 5460046
Alignment:
Q  164 aagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtag 251  Q
    |||||||||||||||||| | || |||| | ||||||||||||||| |||||||| ||||||||||  ||| ||||| || |||||||    
T  5459961 aagctaatttcttgtaacattttatatttc-tttgtaaagaactca-ttgatagtagattggagagatcaatctctcatctagagtag 5460046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 28242396 - 28242448
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||    
T  28242396 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtca 28242448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 13659413 - 13659356
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| |||||| ||||||||||| |||||    
T  13659413 aagaactcatt-gatagtggattggagagatcaatctctcccccagagtaggttaagtt 13659356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 23555342 - 23555286
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||| |||||||||||||    
T  23555342 aagaactcatt-gatagtggattggagagttcaatctctcc-ccatagtaggtcaagtt 23555286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 34603668 - 34603725
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| ||| |||||||| ||||  ||| ||||||||||||||||||||||||    
T  34603668 aagaactcatt-gatggtggattgaagagatcaatctctcctccagagtaggtcaagtt 34603725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 42298052 - 42297999
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    ||||||||||| |||||||||||| ||||  ||| ||||||||||||||||||||    
T  42298052 aagaactcatt-gatagtggattgaagagatcaatctctcctccagagtaggtca 42297999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 46065009 - 46065066
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||  ||||||||||||||||  ||| |||||| |||||||||||||||||    
T  46065009 aagaactcattc-atagtggattggagagatcaatctctcccccagagtaggtcaagtt 46065066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 255
Target Start/End: Original strand, 47115171 - 47115316
Alignment:
Q  109 ttggtgagattgggaaagg-ggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc--tcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||   |||||||||||||||| |||| | |||| | |  | |||||||||||||||||||  | ||||||  |||| ||||| ||    
T  47115171 ttggtgagattgggaaaattggtagaaattagggtt-gttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctcttt-gtaaa-aa 47115267  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtca 255  Q
    | |||| |||||||||||||||||  ||| |||| |||||||||||||||    
T  47115268 cccatt-gatagtggattggagagatcaatctctgctccagagtaggtca 47115316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 193711 - 193759
Alignment:
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||  ||| |||| |||||||||| ||||||||    
T  193711 ttgatagtggattggagagatcaatctcttctccagagtatgtcaagtt 193759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 6177 - 6421
Alignment:
Q  14 caaaggggaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 113  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6177 caaaggggcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaacaccttgtagagagaatcattgagtgtcttggt 6276  T
Q  114 gagattgggaaaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacctcttgtattccttttgtaaagaactcatttg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  6277 gagattgggaaaggggtagaaattagggtttgttcatagtgaac-ttgtcaagctaatttcttgtaagcccttgtatcccttttgtaaagaactcatttg 6375  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  6376 atagtggattggagagtacaaactctcctccagagtaggttaagtt 6421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 434443 - 434681
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg-------gtgaga 117  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||||||| ||| ||||||  ||| |||  |||||||||||||||       ||||||    
T  434443 tagggtttagggt-ctttgattagagt-tctcttgggttggaaaacatggtaaataccttggtgagtgaaaatcattgagtgtcttgttcattggtgaga 434540  T
Q  118 ttggg--aaaggggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttg 213  Q
    |||||  ||| ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  |||| |||| ||||||||| |    
T  434541 ttggggaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctcttt-gtaa-gaactcatt-g 434635  T
Q  214 atagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  434636 atagtggattggagagttcaatctctcctccagagtaggtcaagtt 434681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 259
Target Start/End: Complemental strand, 11423 - 11181
Alignment:
Q  25 ctctagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagag--aatcattgagtgtcttg------gtga 115  Q
    |||||||||||| ||| ||||||||||||  ||||||||||||  |||||| | ||||||||||  ||| |  |||||||||||||||||      ||||    
T  11423 ctctagggtttatggt-ctttgattagagcttctcttgggttgggaaacattgtaaacaccttggtgagtgtaaatcattgagtgtcttgttcttggtga 11325  T
Q  116 gattggga--aaggggtagaaattagggtttgttcatagtgaacattgtcaag-ctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatt 211  Q
    ||||||||  || ||||||||||||||||| |||| | |||||| |||| ||  |||||||||||||||| | ||||||  ||||||||| |||||| ||    
T  11324 gattgggagaaaagggtagaaattagggtt-gttctttgtgaac-ttgtaaaatctaatttcttgtaacccttttgtatctcttttgtaa-gaactcgtt 11228  T
Q  212 tgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
     |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  11227 -gatagtggattggagagttcaatctctcctccagagtaggtcaagtt 11181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 259
Target Start/End: Complemental strand, 8907 - 8755
Alignment:
Q  107 tcttggtgagattggga--aaggggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaacc-tcttgtattccttttgtaaag 203  Q
    |||||||||||||||||  || ||||||||||||||||| |||| | |||||| |    || |||||||||||||||| | ||||||  ||||||||| |    
T  8907 tcttggtgagattgggagaaaagggtagaaattagggtt-gttctttgtgaacttataaaatctaatttcttgtaacccttttgtatctcttttgtaa-g 8810  T
Q  204 aactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||| || |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  8809 aactcgtt-gatagtggattggagagttcaatctctcctccagagtaggtcaagtt 8755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 259
Target Start/End: Original strand, 827 - 1063
Alignment:
Q  28 tagggtttagggttctttgattagagtatctcttgggttga-aaacatgggaaacaccttgtagagagaa--tcattgagtgtcttg------gtgagat 118  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||  ||| |||  |||||||||||||||      |||||||    
T  827 tagggtttagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcttggtgagat 924  T
Q  119 tgggaaag--gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaacc-tcttgtattccttttgtaaagaactcatttga 214  Q
    |||||||   ||||||||||||||||| |||| | |||||| ||||||| ||||||||||||||||| | ||||||  ||||    || |||||||| ||    
T  925 tgggaaaaaagggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacccttttgtatctctttg---aacaactcatt-ga 1018  T
Q  215 tagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  1019 tagtggattggagagttcaatctctcctccagagtaggtcaagtt 1063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 11557 - 11705
Alignment:
Q  109 ttggtgagattgggaaagg-ggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaac-ctcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||   |||||||||||||||| |||| | |||||| ||||||| |||||||||||||||| |  ||||||  |||| |||| |||    
T  11557 ttggtgagattgggaaaaatggtagaaattagggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaactcatttgtatctcttt-gtaa-gaa 11652  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  11653 ctcatt-gatagtggattggagagttcaatctctcctccagagtaggtcaagtt 11705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 114602 - 114750
Alignment:
Q  109 ttggtgagattgggaaag-gggtagaaattagggtttgttcatagtgaacattgtcaa-gctaatttcttgtaac-ctcttgtattccttttgtaaagaa 205  Q
    |||||||||||||||||  |||||||||||| |||| |||| | |||||| ||||||| |||||||||||||||| || ||||| ||  ||||| |||||    
T  114602 ttggtgagattgggaaaaagggtagaaattaaggtt-gttctttgtgaac-ttgtcaaagctaatttcttgtaacgcttttgta-tctctttgt-aagaa 114697  T
Q  206 ctcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||| |||||||||||||||||||  ||| |||||||||||||||||| |||||    
T  114698 ctca-ttgatagtggattggagagatcaatctctcctccagagtaggttaagtt 114750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 259
Target Start/End: Complemental strand, 18151 - 18024
Alignment:
Q  128 ggtagaaattagggtttgttcatagtgaacattgtcaagctaatttcttgtaac-ctcttgtattccttttgtaaagaactcatttgatagtggattgga 226  Q
    |||||||||||||||| |||||| |||| | |  | |||||||||||||||||| |  ||||||  |||| |||||  ||||||| ||||||||||||||    
T  18151 ggtagaaattagggtt-gttcattgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt-gtaaa--actcatt-gatagtggattgga 18057  T
Q  227 gagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||  ||| ||||||||||| ||||||||||||    
T  18056 gagatcaatctctcctccagggtaggtcaagtt 18024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 10589 - 10637
Alignment:
Q  211 ttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    |||||||||||||| ||||  ||| ||||||||||||||||||||||||    
T  10589 ttgatagtggattgaagagatcaatctctcctccagagtaggtcaagtt 10637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 149174 - 149117
Alignment:
Q  201 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtt 259  Q
    ||||||||||| |||||||||||||||||  ||| |||||| ||||||||||| |||||    
T  149174 aagaactcatt-gatagtggattggagagatcaatctctcccccagagtaggttaagtt 149117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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