View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17352_high_2 (Length: 330)
Name: NF17352_high_2
Description: NF17352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17352_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 16 - 312
Target Start/End: Complemental strand, 17492666 - 17492370
Alignment:
| Q |
16 |
tcatatcatttaaaaaacatccatttaataacatacaaaaaacattaggctaagaagttaatactctataccaatttaatgtcttaaattataatcttga |
115 |
Q |
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| T |
17492666 |
tcatatcatttaaaaaacatccatttaataacatacaaaaaacatcaggctaagaagttaatactctataccaatttaatatcttaaattataatcttga |
17492567 |
T |
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| Q |
116 |
aattaaagaaatttcaaaatcattacaaaaattgaaaattttctatcacataagttttttaggacaatattaaaaactaaattgaccgatgaacgaaaat |
215 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
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| T |
17492566 |
aattaaggaaatttcaaaatcattacaaaaattgaaaattttctatcacataagttttttaggacaatattaaagactaaattgaccgatgattgaaaat |
17492467 |
T |
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| Q |
216 |
tttcaattttatgaatcattttcaaagtattgttaaattcaacgactagaatcaaatataaaaattcgtataatttcaatgattaaattgactaacc |
312 |
Q |
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| T |
17492466 |
tttcaatttcatgaatagttttcaaagtattgttaaattcagcgactagaatcaaatataaaaattcgtataatttcaatgactaaattgactaacc |
17492370 |
T |
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