View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17352_low_7 (Length: 224)
Name: NF17352_low_7
Description: NF17352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17352_low_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 38196762 - 38196539
Alignment:
| Q |
1 |
gcaaaagataattcattcatctctagcagtcatgtagctggaacagaacactttagagtggctgatttgatggaacagaacaggcaaggatggaattggg |
100 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38196762 |
gcaaaagataattcattcatctctagcagtcgtgtagctggaacagaacactttagagtggctgatttgatggaacagaacaggcaaggatggaattggg |
38196663 |
T |
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| Q |
101 |
gattgatagatggtatgttcaatgaaagagacaaaggggagatttgcaagctcacaatcacaatggctacagaggaagacaagcttatttggaaatttaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38196662 |
gattgatagatggtatgttcaatgaaagagacaaaggggagatttgcaagctcacaatcacaatggctacagaggaagacaagcttatttggaaatttaa |
38196563 |
T |
|
| Q |
201 |
taatagaggtaattatactgtgaa |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
38196562 |
taatagaggtaattatactgtgaa |
38196539 |
T |
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