View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17355_high_8 (Length: 273)
Name: NF17355_high_8
Description: NF17355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17355_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 26709904 - 26710156
Alignment:
| Q |
1 |
agcttcgtaaaaccacaaaattgtcttgccaaccttactatgaaaccaacttaaatattattctcttccattttcaatactagcattaaaatccactaaa |
100 |
Q |
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|||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26709904 |
agcttcttaaaaccacaaaattgtcttgcaaaccttactatgaaaccaacttaaatattattctcttccattttcaatactagcattaaaatccactaaa |
26710003 |
T |
|
| Q |
101 |
gcataacattttgatcttatatctttattataacatgttactatgacgatgaagaagacaatgtgtcaatgccaatcatatatggttaccaaaattattc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
26710004 |
gcataacattttgatcttatatctttattataacatgttcctatgacgatgaagaagacaatgtgtcaatgccaatcatatttggttaccaaaattattc |
26710103 |
T |
|
| Q |
201 |
attctcacatagaagatttcttgtataagcactaataacgcaagattatttta |
253 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||| |||||| |
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| T |
26710104 |
attctcacatagaagatttcttgtataggcactaataacgcaagatcatttta |
26710156 |
T |
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