View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17355_low_16 (Length: 249)
Name: NF17355_low_16
Description: NF17355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17355_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 4725759 - 4725984
Alignment:
| Q |
1 |
ccaccttatgatatactagtagactaatgtttagccagatgcttggcgtgacaatttttnnnnnnngtgattaagtaannnnnnnnn--gagagaagaga |
98 |
Q |
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| T |
4725759 |
ccaccttatgatata---gtagactaatgtttagccagatgcttggcgtgacaatttttaaaaaaagtgattaagtactttttttttttgagagaagaga |
4725855 |
T |
|
| Q |
99 |
ttaagtaattaataatttgatattcaagattttgagtcacatacacaacaattatatatgaatttcnnnnnnnatgtaaatcatatatcaatctgcgcaa |
198 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
4725856 |
ttaagtaattaataatttgattttcaagattttgagtcacatacacaacaattatatatgaatttctttttttatgtaaatcatatatcaatctgcgcaa |
4725955 |
T |
|
| Q |
199 |
cttagatactaacaagaagtaacttagat |
227 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
4725956 |
cttagatactaacaagaagtaacttagat |
4725984 |
T |
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