View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17356_high_10 (Length: 289)
Name: NF17356_high_10
Description: NF17356
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17356_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 20545207 - 20544935
Alignment:
| Q |
1 |
tcgaggagtgtctgtgcttcatatataactttgataccatcttagaatttaggtatgttatataactcaagcctattgtaagatgagggagaacctccac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20545207 |
tcgaggagtgtctgtgcttcatatataactttgataccatcttagaatttaggtatgttatataactcaagcctattgtaagatgagggagaacctccac |
20545108 |
T |
|
| Q |
101 |
ttataaacatttctacatgtgcaactcaacaataacaaaaaacacattttgtatctaaaaaacaatcatattcatcaacatataaatgagaagttagtta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20545107 |
ttataaacatttctacatgtgcaactcaacaataacaaaaaacacattttgtatctaaaaaacaatcatattcatcaacatataaatgagaagttagtta |
20545008 |
T |
|
| Q |
201 |
gttagttacctgaagaggtgagaaacgtgtccgtttgtattccaatgtgcaaacaacctttgaggtaaagcta |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20545007 |
gttagttacctgaagaggtgagaaacgtgtccgtttgtattccaatgtgcaaacaacctttgaggtaaagcta |
20544935 |
T |
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