View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17357_high_15 (Length: 325)

Name: NF17357_high_15
Description: NF17357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17357_high_15
NF17357_high_15
[»] chr7 (36 HSPs)
chr7 (88-160)||(33397549-33397621)
chr7 (274-315)||(2004882-2004923)
chr7 (274-315)||(26253175-26253216)
chr7 (274-315)||(33507620-33507661)
chr7 (274-315)||(38228626-38228667)
chr7 (274-315)||(42913243-42913284)
chr7 (274-313)||(11290571-11290610)
chr7 (274-313)||(19228719-19228758)
chr7 (274-313)||(21849252-21849291)
chr7 (274-313)||(23595367-23595406)
chr7 (274-313)||(29185788-29185827)
chr7 (274-313)||(30421385-30421424)
chr7 (274-313)||(33602957-33602996)
chr7 (274-313)||(33653989-33654028)
chr7 (274-313)||(33690318-33690357)
chr7 (274-313)||(34826171-34826210)
chr7 (274-313)||(45011561-45011600)
chr7 (274-312)||(25968515-25968553)
chr7 (274-312)||(47580291-47580329)
chr7 (274-312)||(48608300-48608338)
chr7 (274-315)||(2007211-2007252)
chr7 (274-315)||(2850242-2850283)
chr7 (274-315)||(15076155-15076196)
chr7 (274-315)||(19919274-19919315)
chr7 (274-315)||(21751984-21752025)
chr7 (274-315)||(29165499-29165540)
chr7 (276-313)||(34826626-34826663)
chr7 (274-315)||(44133833-44133874)
chr7 (274-315)||(46298062-46298103)
chr7 (274-315)||(46414341-46414382)
chr7 (274-302)||(1976320-1976348)
chr7 (274-302)||(18868286-18868314)
chr7 (277-313)||(28036123-28036159)
chr7 (274-302)||(34327367-34327395)
chr7 (274-302)||(37700629-37700657)
chr7 (277-313)||(41648210-41648246)
[»] chr2 (31 HSPs)
chr2 (272-313)||(16205337-16205378)
chr2 (274-313)||(13324548-13324587)
chr2 (274-315)||(8738574-8738615)
chr2 (274-315)||(32347715-32347756)
chr2 (274-315)||(33714347-33714388)
chr2 (274-315)||(40443465-40443506)
chr2 (274-313)||(6732169-6732208)
chr2 (274-313)||(12603136-12603175)
chr2 (274-313)||(12851278-12851317)
chr2 (274-313)||(31838144-31838183)
chr2 (274-313)||(31838594-31838633)
chr2 (274-313)||(35808234-35808273)
chr2 (274-313)||(35808689-35808728)
chr2 (274-313)||(38203956-38203995)
chr2 (274-313)||(38305954-38305993)
chr2 (274-313)||(39120095-39120134)
chr2 (274-313)||(39120548-39120587)
chr2 (274-313)||(40957511-40957550)
chr2 (274-313)||(40957965-40958004)
chr2 (274-312)||(10187519-10187557)
chr2 (274-312)||(12068142-12068180)
chr2 (274-312)||(12602681-12602719)
chr2 (274-312)||(28720768-28720806)
chr2 (274-312)||(36072808-36072846)
chr2 (274-312)||(39007610-39007648)
chr2 (277-315)||(40504645-40504683)
chr2 (274-315)||(9437485-9437526)
chr2 (274-302)||(34131322-34131350)
chr2 (276-312)||(39146362-39146398)
chr2 (274-302)||(40443916-40443944)
chr2 (274-302)||(41312375-41312403)
[»] chr1 (54 HSPs)
chr1 (274-315)||(45363572-45363613)
chr1 (274-315)||(1607932-1607973)
chr1 (274-315)||(3792912-3792953)
chr1 (274-315)||(11192266-11192307)
chr1 (274-315)||(19893680-19893721)
chr1 (274-315)||(33524276-33524317)
chr1 (275-312)||(38203069-38203106)
chr1 (274-313)||(9472074-9472113)
chr1 (274-313)||(9472517-9472556)
chr1 (274-313)||(11371568-11371607)
chr1 (274-313)||(16069860-16069899)
chr1 (274-313)||(17338426-17338465)
chr1 (274-313)||(17935175-17935214)
chr1 (274-313)||(18104308-18104347)
chr1 (274-313)||(19894135-19894174)
chr1 (274-313)||(24026178-24026217)
chr1 (274-313)||(26073740-26073779)
chr1 (274-313)||(30280878-30280917)
chr1 (274-313)||(30633501-30633540)
chr1 (274-313)||(35789493-35789532)
chr1 (274-313)||(37232356-37232395)
chr1 (274-313)||(37232811-37232850)
chr1 (274-313)||(41411452-41411491)
chr1 (274-313)||(41411906-41411945)
chr1 (274-313)||(43226680-43226719)
chr1 (274-313)||(43638934-43638973)
chr1 (274-313)||(47559648-47559687)
chr1 (274-313)||(48689060-48689099)
chr1 (274-313)||(48689514-48689553)
chr1 (274-313)||(49580373-49580412)
chr1 (274-313)||(51681307-51681346)
chr1 (274-312)||(26073286-26073324)
chr1 (274-312)||(30926481-30926519)
chr1 (274-312)||(31108999-31109037)
chr1 (274-312)||(31683316-31683354)
chr1 (274-312)||(34151212-34151250)
chr1 (274-312)||(39757829-39757867)
chr1 (274-312)||(39763183-39763221)
chr1 (274-315)||(3369013-3369054)
chr1 (274-315)||(3536661-3536702)
chr1 (278-315)||(6413623-6413660)
chr1 (274-315)||(13566382-13566423)
chr1 (274-315)||(18521061-18521102)
chr1 (274-315)||(22888200-22888241)
chr1 (274-315)||(23488252-23488293)
chr1 (274-315)||(38163807-38163848)
chr1 (274-302)||(11748225-11748253)
chr1 (274-302)||(13539032-13539060)
chr1 (274-302)||(20754242-20754270)
chr1 (274-302)||(33853041-33853069)
chr1 (274-302)||(33927849-33927877)
chr1 (274-302)||(35373682-35373710)
chr1 (274-302)||(36740094-36740122)
chr1 (274-302)||(42283159-42283187)
[»] chr8 (37 HSPs)
chr8 (274-313)||(12179746-12179785)
chr8 (274-313)||(12424174-12424213)
chr8 (274-313)||(23130163-23130202)
chr8 (274-315)||(8841739-8841780)
chr8 (274-315)||(18173520-18173561)
chr8 (274-315)||(38508225-38508266)
chr8 (275-315)||(5925418-5925458)
chr8 (274-313)||(109398-109437)
chr8 (274-313)||(3612719-3612758)
chr8 (274-313)||(6078927-6078966)
chr8 (274-313)||(6082857-6082896)
chr8 (274-313)||(14092490-14092529)
chr8 (274-313)||(15106405-15106444)
chr8 (274-313)||(18150303-18150342)
chr8 (276-315)||(18595709-18595748)
chr8 (274-313)||(34414953-34414992)
chr8 (274-313)||(34793227-34793266)
chr8 (274-313)||(35575343-35575382)
chr8 (274-313)||(36091278-36091317)
chr8 (274-313)||(36310937-36310976)
chr8 (274-313)||(36844781-36844820)
chr8 (274-313)||(38507773-38507812)
chr8 (274-313)||(38508573-38508612)
chr8 (274-313)||(41926065-41926104)
chr8 (274-313)||(42026263-42026302)
chr8 (274-313)||(42149834-42149873)
chr8 (274-312)||(7227040-7227078)
chr8 (274-312)||(18252473-18252511)
chr8 (274-312)||(24201604-24201642)
chr8 (274-312)||(27141387-27141425)
chr8 (274-304)||(35161051-35161081)
chr8 (274-315)||(4418664-4418705)
chr8 (274-311)||(9375742-9375779)
chr8 (274-302)||(2828925-2828953)
chr8 (274-302)||(6785857-6785885)
chr8 (274-310)||(27343271-27343307)
chr8 (274-302)||(35034675-35034703)
[»] chr4 (48 HSPs)
chr4 (274-313)||(29145820-29145859)
chr4 (274-313)||(51919680-51919719)
chr4 (274-315)||(28984927-28984968)
chr4 (274-315)||(39150606-39150647)
chr4 (274-315)||(42512145-42512186)
chr4 (273-313)||(46472720-46472760)
chr4 (274-313)||(480216-480255)
chr4 (274-313)||(5512148-5512187)
chr4 (274-313)||(5519741-5519780)
chr4 (274-313)||(6785982-6786021)
chr4 (274-313)||(6786436-6786475)
chr4 (274-313)||(11493080-11493119)
chr4 (274-313)||(11987661-11987700)
chr4 (274-313)||(12294200-12294239)
chr4 (274-313)||(19054215-19054254)
chr4 (274-313)||(19326581-19326620)
chr4 (274-313)||(19879415-19879454)
chr4 (274-313)||(20943721-20943760)
chr4 (274-313)||(23458270-23458309)
chr4 (274-313)||(24749720-24749759)
chr4 (274-313)||(24750162-24750201)
chr4 (274-313)||(26618876-26618915)
chr4 (274-313)||(35822543-35822582)
chr4 (274-313)||(38992081-38992120)
chr4 (274-313)||(39767006-39767045)
chr4 (274-313)||(42511694-42511733)
chr4 (274-313)||(43622386-43622425)
chr4 (274-313)||(55811527-55811566)
chr4 (274-313)||(56319604-56319643)
chr4 (274-312)||(5496964-5497002)
chr4 (274-312)||(13483257-13483295)
chr4 (274-312)||(37874921-37874959)
chr4 (274-312)||(39766563-39766601)
chr4 (274-304)||(45098372-45098402)
chr4 (274-312)||(45429037-45429075)
chr4 (274-312)||(55811083-55811121)
chr4 (274-315)||(1620446-1620487)
chr4 (274-315)||(5985411-5985452)
chr4 (274-315)||(12698864-12698905)
chr4 (274-315)||(19037392-19037433)
chr4 (274-315)||(26487791-26487832)
chr4 (274-315)||(34020362-34020403)
chr4 (274-315)||(44370765-44370806)
chr4 (272-313)||(55173117-55173158)
chr4 (274-302)||(875197-875225)
chr4 (274-302)||(4894032-4894060)
chr4 (274-310)||(19878960-19878996)
chr4 (274-302)||(44380954-44380982)
[»] scaffold0197 (1 HSPs)
scaffold0197 (275-313)||(3791-3829)
[»] chr6 (12 HSPs)
chr6 (274-315)||(26570221-26570262)
chr6 (274-314)||(13648982-13649022)
chr6 (274-313)||(7675846-7675885)
chr6 (274-313)||(14190998-14191037)
chr6 (274-313)||(19059564-19059603)
chr6 (274-313)||(22084135-22084174)
chr6 (274-313)||(26569770-26569809)
chr6 (274-313)||(34327924-34327963)
chr6 (274-312)||(8677618-8677656)
chr6 (274-315)||(5038968-5039009)
chr6 (274-311)||(12148791-12148828)
chr6 (274-302)||(34674171-34674199)
[»] chr5 (45 HSPs)
chr5 (274-315)||(7274934-7274975)
chr5 (274-315)||(26338856-26338897)
chr5 (274-315)||(43401178-43401219)
chr5 (274-313)||(2172484-2172523)
chr5 (274-313)||(4843091-4843130)
chr5 (274-313)||(4843530-4843569)
chr5 (274-313)||(7001710-7001749)
chr5 (274-313)||(8105212-8105251)
chr5 (274-313)||(8596983-8597022)
chr5 (274-313)||(9509107-9509146)
chr5 (274-313)||(12331130-12331169)
chr5 (274-313)||(18907514-18907553)
chr5 (274-313)||(21063899-21063938)
chr5 (274-313)||(23098337-23098376)
chr5 (274-313)||(26403002-26403041)
chr5 (274-313)||(31124515-31124554)
chr5 (274-313)||(32064945-32064984)
chr5 (274-313)||(32128955-32128994)
chr5 (274-313)||(38308546-38308585)
chr5 (274-313)||(38539627-38539666)
chr5 (274-313)||(39412772-39412811)
chr5 (274-313)||(40360312-40360351)
chr5 (274-313)||(43401632-43401671)
chr5 (274-313)||(43446960-43446999)
chr5 (274-313)||(43447414-43447453)
chr5 (274-312)||(6987548-6987586)
chr5 (274-312)||(9111362-9111400)
chr5 (274-312)||(34448687-34448725)
chr5 (274-312)||(34728967-34729005)
chr5 (274-312)||(38309001-38309039)
chr5 (274-312)||(41960444-41960482)
chr5 (85-155)||(42228990-42229060)
chr5 (274-312)||(42661791-42661829)
chr5 (274-312)||(43211834-43211872)
chr5 (274-315)||(4000960-4001001)
chr5 (274-315)||(4565602-4565643)
chr5 (274-315)||(8558101-8558142)
chr5 (274-315)||(23097884-23097925)
chr5 (274-315)||(29653942-29653983)
chr5 (274-315)||(31110191-31110232)
chr5 (274-315)||(34449138-34449179)
chr5 (274-302)||(6257816-6257844)
chr5 (274-302)||(12444708-12444736)
chr5 (275-315)||(18282844-18282884)
chr5 (274-302)||(38425094-38425122)
[»] chr3 (38 HSPs)
chr3 (274-315)||(1630855-1630896)
chr3 (274-315)||(9254226-9254267)
chr3 (274-315)||(37170076-37170117)
chr3 (274-315)||(54617354-54617395)
chr3 (274-313)||(1631297-1631336)
chr3 (274-313)||(6471431-6471470)
chr3 (274-313)||(8399357-8399396)
chr3 (274-313)||(16301283-16301322)
chr3 (274-313)||(25656820-25656859)
chr3 (274-313)||(26703714-26703753)
chr3 (274-313)||(26704167-26704206)
chr3 (274-313)||(31401675-31401714)
chr3 (274-313)||(36181386-36181425)
chr3 (272-315)||(36181818-36181861)
chr3 (274-313)||(46710236-46710275)
chr3 (274-313)||(50743418-50743457)
chr3 (274-313)||(51444834-51444873)
chr3 (274-313)||(51949812-51949851)
chr3 (274-313)||(52718379-52718418)
chr3 (274-313)||(52718833-52718872)
chr3 (274-312)||(1000608-1000646)
chr3 (275-313)||(17528076-17528114)
chr3 (274-312)||(19227643-19227681)
chr3 (274-312)||(22607102-22607140)
chr3 (275-313)||(22607556-22607594)
chr3 (274-312)||(30640913-30640951)
chr3 (274-312)||(34744740-34744778)
chr3 (276-313)||(6470977-6471014)
chr3 (274-315)||(8150692-8150733)
chr3 (274-315)||(18386660-18386700)
chr3 (274-315)||(33806403-33806444)
chr3 (274-315)||(35317620-35317661)
chr3 (274-311)||(40007220-40007257)
chr3 (274-315)||(54239381-54239422)
chr3 (274-302)||(35105080-35105108)
chr3 (274-302)||(37100254-37100282)
chr3 (274-302)||(39467987-39468015)
chr3 (274-302)||(43140979-43141007)
[»] scaffold0041 (2 HSPs)
scaffold0041 (274-313)||(28086-28125)
scaffold0041 (274-313)||(28539-28578)
[»] scaffold0022 (1 HSPs)
scaffold0022 (274-313)||(65326-65365)
[»] scaffold0036 (1 HSPs)
scaffold0036 (274-315)||(62028-62069)
[»] scaffold0068 (1 HSPs)
scaffold0068 (274-302)||(45375-45403)


Alignment Details
Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 33397621 - 33397549
Alignment:
Q  88 aattttggaaaaatattgagacatatttcctcgtgaaaatctcgagacaataaatatcgcgagacatagcatt 160  Q
    |||||||| ||||||||||||||||||| ||| ||||| ||||| |||||||||| || | ||||||||||||    
T  33397621 aattttgggaaaatattgagacatattttctcatgaaactctcgggacaataaatgtctcaagacatagcatt 33397549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 2004882 - 2004923
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||| ||||||||||||||| ||||||||||    
T  2004882 ttaaatatgtttttgatctctataaatatgtcaacttttcat 2004923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 26253175 - 26253216
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  26253175 ttaaatatgtttttggtccctataaatatgtcaacttttcat 26253216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 33507661 - 33507620
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  33507661 ttaaatatgtttttggtccctataaatatgtcaacttttcat 33507620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 38228626 - 38228667
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  38228626 ttaaatatgtttttggtccctataaatatgtcaacttttcat 38228667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 42913243 - 42913284
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  42913243 ttaaatatgtttttggtccctataaatatgtcaacttttcat 42913284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 11290610 - 11290571
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  11290610 ttaaatatgtttttggtccctataaatatgtcaacttttc 11290571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 19228758 - 19228719
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  19228758 ttaaatatgtttttggtcgctataaatatgtcaacttttc 19228719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 21849252 - 21849291
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  21849252 ttaaatatgtttttggtctctataaatatatcaacttttc 21849291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 23595406 - 23595367
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  23595406 ttaaatatgtttttggtccctataaatatgtcaacttttc 23595367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 29185788 - 29185827
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  29185788 ttaaatatgtttttggtccctataaatatgtcaacttttc 29185827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 30421424 - 30421385
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  30421424 ttaaatatgtttttggtccctataaatatgtcaacttttc 30421385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 33602996 - 33602957
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  33602996 ttaaatatgtttttggtccctataaatatgtcaacttttc 33602957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 33653989 - 33654028
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  33653989 ttaaatatgtttttggtccctataaatatgtcaacttttc 33654028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 33690318 - 33690357
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  33690318 ttaaatatgtttttcgtctctataaatatgtcaacttttc 33690357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 34826171 - 34826210
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  34826171 ttaaatatgtttttggtccctataaatatgtcaacttttc 34826210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 45011600 - 45011561
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  45011600 ttaaatatgtttttggtccctataaatatgtcaacttttc 45011561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 25968553 - 25968515
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  25968553 ttaaatatgttttttgtctctataaatatgtcaactttt 25968515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 47580329 - 47580291
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    ||||||||||||||||||||||||||| ||| |||||||    
T  47580329 ttaaatatgtttttggtctctataaatttgttaactttt 47580291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 48608300 - 48608338
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  48608300 ttaaatatgtttttggtccctataaatatgtcaactttt 48608338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 2007252 - 2007211
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||| | ||||||||||    
T  2007252 ttaaatatgtttttggtccctataaatatataaacttttcat 2007211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 2850242 - 2850283
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||||||| ||||||||||| || |||||||    
T  2850242 ttaaatatgtttttggtctttataaatatgtcaatttttcat 2850283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 15076155 - 15076196
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||| || |||||||||||| ||||||||||    
T  15076155 ttaaatatgtttttgttccctataaatatgttaacttttcat 15076196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 19919274 - 19919315
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||| | ||||||||||    
T  19919274 ttaaatatgtttttggtccctataaatatatcaacttttcat 19919315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 21752025 - 21751984
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||| | ||||||||||    
T  21752025 ttaaatatgtttttggtccctataaatatatcaacttttcat 21751984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 29165540 - 29165499
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||| | ||||||||||    
T  29165540 ttaaatatgtttttggtccctataaatatatcaacttttcat 29165499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Complemental strand, 34826663 - 34826626
Alignment:
Q  276 aaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  34826663 aaatatgtttttggtccctataaatatgtcaacttttc 34826626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 44133833 - 44133874
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||||||  ||||||||||| ||||||||||    
T  44133833 ttaaatatgtttttggtccatataaatatgtcaacttttcat 44133874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 46298062 - 46298103
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||||| |||||||| | ||||||||||    
T  46298062 ttaaatatgtttttggtctccataaatatattaacttttcat 46298103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 46414382 - 46414341
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||| | ||||||||||    
T  46414382 ttaaatatgtttttggtccctataaatatatcaacttttcat 46414341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 1976348 - 1976320
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  1976348 ttaaatatgtttttggtctctataaatat 1976320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 18868286 - 18868314
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  18868286 ttaaatatgtttttggtctctataaatat 18868314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 313
Target Start/End: Original strand, 28036123 - 28036159
Alignment:
Q  277 aatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  28036123 aatatgtttttggtccctataaatatgttaacttttc 28036159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 34327395 - 34327367
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  34327395 ttaaatatgtttttggtctctataaatat 34327367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 37700629 - 37700657
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  37700629 ttaaatatgtttttggtctctataaatat 37700657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 313
Target Start/End: Original strand, 41648210 - 41648246
Alignment:
Q  277 aatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  41648210 aatatgtttttggtccctataaatatgtcaacttttc 41648246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 16205337 - 16205378
Alignment:
Q  272 atttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  16205337 atttaaatatgtttttggtctctataaatatgtcaacttttc 16205378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 13324587 - 13324548
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  13324587 ttaaatatgtttttggtctctataaatatgtcaacttttc 13324548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 8738615 - 8738574
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||||||||||||||||||  ||||||||||    
T  8738615 ttaaatatgtttttggtctctataaatatgccaacttttcat 8738574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 32347715 - 32347756
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  32347715 ttaaatatgtttttggtccctataaatatgtcaacttttcat 32347756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 33714347 - 33714388
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  33714347 ttaaatatgtttttggtctctataaatatatcaacttttcat 33714388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 40443465 - 40443506
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  40443465 ttaaatatgtttttggtccctataaatatgtcaacttttcat 40443506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 6732208 - 6732169
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  6732208 ttaaatatgtttttggtccctataaatatgttaacttttc 6732169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 12603175 - 12603136
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  12603175 ttaaatatgtttttggtccctataaatatgtcaacttttc 12603136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 12851278 - 12851317
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  12851278 ttaaatatgtttttggtccctataaatatgttaacttttc 12851317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 31838144 - 31838183
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  31838144 ttaaatatgtttttggtccctataaatatgtcaacttttc 31838183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 31838633 - 31838594
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  31838633 ttaaatatgtttttggtccctataaatatgtcaacttttc 31838594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 35808234 - 35808273
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  35808234 ttaaatatgtttttggtccctataaatatgtcaacttttc 35808273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 35808728 - 35808689
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  35808728 ttaaatatgtttttggtccctataaatatgtcaacttttc 35808689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 38203995 - 38203956
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  38203995 ttaaatatgtttttggtccctataaatatgtcaacttttc 38203956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 38305993 - 38305954
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  38305993 ttaaatatgtttttggtccctataaatatgtcaacttttc 38305954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 39120095 - 39120134
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  39120095 ttaaatatgtttttggtccctataaatatgttaacttttc 39120134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 39120587 - 39120548
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  39120587 ttaaatatgtttttggtccctataaatatgtcaacttttc 39120548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 40957511 - 40957550
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  40957511 ttaaatatgtttttggtccctataaatatgtcaacttttc 40957550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 40958004 - 40957965
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  40958004 ttaaatatgtttttggtctttataaatatgtcaacttttc 40957965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 10187519 - 10187557
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  10187519 ttaaatatgtttttggtccctataaatatgtcaactttt 10187557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 12068180 - 12068142
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  12068180 ttaaatatgtttttggtccctataaatatgtcaactttt 12068142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 12602681 - 12602719
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  12602681 ttaaatatgtttttggtccctataaatatgtcaactttt 12602719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 28720806 - 28720768
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  28720806 ttaaatatgtttttggtccctataaatatgtcaactttt 28720768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 36072808 - 36072846
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  36072808 ttaaatatgtttttggtccctataaatatgtcaactttt 36072846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 39007610 - 39007648
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  39007610 ttaaatatgtttttggtccctataaatatgttaactttt 39007648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 315
Target Start/End: Original strand, 40504645 - 40504683
Alignment:
Q  277 aatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  40504645 aatatgtttttggtccctataaatatgtcaacttttcat 40504683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 9437526 - 9437485
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||| | ||||||||||    
T  9437526 ttaaatatgtttttggtccctataaatatatcaacttttcat 9437485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 34131322 - 34131350
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  34131322 ttaaatatgtttttggtctctataaatat 34131350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 312
Target Start/End: Original strand, 39146362 - 39146398
Alignment:
Q  276 aaatatgtttttggtctctataaatatgtgaactttt 312  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  39146362 aaatatgtttttgatctctataaatatgtcaactttt 39146398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 40443944 - 40443916
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  40443944 ttaaatatgtttttggtctctataaatat 40443916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 41312403 - 41312375
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  41312403 ttaaatatgtttttggtctctataaatat 41312375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 45363613 - 45363572
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  45363613 ttaaatatgtttttggtctctataaatatgtcaacttttcat 45363572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 1607973 - 1607932
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  1607973 ttaaatatgtttttggtcactataaatatgtcaacttttcat 1607932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 3792912 - 3792953
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  3792912 ttaaatatgtttttggtccctataaatatgtcaacttttcat 3792953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 11192266 - 11192307
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  11192266 ttaaatatgtttttggtccctataaatatgtcaacttttcat 11192307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 19893680 - 19893721
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  19893680 ttaaatatgtttttggtccctataaatatgtcaacttttcat 19893721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 33524317 - 33524276
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  33524317 ttaaatatgtttttggtccctataaatatgtcaacttttcat 33524276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 312
Target Start/End: Original strand, 38203069 - 38203106
Alignment:
Q  275 taaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||||||||||||||| |||||||    
T  38203069 taaatatgtttttggtctctataaatatgtcaactttt 38203106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 9472074 - 9472113
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  9472074 ttaaatatgtttttggtccctataaatatgtcaacttttc 9472113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 9472556 - 9472517
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  9472556 ttaaatatgtttttggtccctataaatatgtcaacttttc 9472517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 11371568 - 11371607
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  11371568 ttaaatatgtttttggtccctataaatatgttaacttttc 11371607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 16069860 - 16069899
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  16069860 ttaaatatgtttttggtccctataaatatgtcaacttttc 16069899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 17338465 - 17338426
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  17338465 ttaaatatgtttttggtccctataaatatgtcaacttttc 17338426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 17935214 - 17935175
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  17935214 ttaaatatgtttttggtccctataaatatgtcaacttttc 17935175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 18104308 - 18104347
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  18104308 ttaaatatgtttttggtccctataaatatgttaacttttc 18104347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 19894174 - 19894135
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  19894174 ttaaatatgtttttggtctccataaatatgtcaacttttc 19894135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 24026178 - 24026217
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  24026178 ttaaatatgtttttggtccctataaatatgtcaacttttc 24026217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 26073779 - 26073740
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  26073779 ttaaatatgtttttggtccctataaatatgtcaacttttc 26073740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 30280917 - 30280878
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  30280917 ttaaatatgtttttggtccctataaatatgtcaacttttc 30280878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 30633540 - 30633501
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  30633540 ttaaatatgtttttggtccctataaatatgtcaacttttc 30633501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 35789493 - 35789532
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  35789493 ttaaatatatttttggtctctataaatatgtcaacttttc 35789532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 37232356 - 37232395
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  37232356 ttaaatatgtttttggtccctataaatatgtcaacttttc 37232395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 37232850 - 37232811
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  37232850 ttaaatatgtttttggtccctataaatatgtcaacttttc 37232811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 41411452 - 41411491
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  41411452 ttaaatatgtttttggtccctataaatatgtcaacttttc 41411491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 41411945 - 41411906
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  41411945 ttaaatatgtttttggtccctataaatatgtcaacttttc 41411906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 43226680 - 43226719
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  43226680 ttaaatatgtttttggtctctataaatatattaacttttc 43226719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 43638934 - 43638973
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  43638934 ttaaatatgtttttggtccctataaatatgtcaacttttc 43638973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 47559648 - 47559687
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| || ||||||||||||||||||    
T  47559648 ttaaatatgtttttggtccctgtaaatatgtgaacttttc 47559687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 48689060 - 48689099
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  48689060 ttaaatatgtttttggtccctataaatatgtcaacttttc 48689099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 48689553 - 48689514
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  48689553 ttaaatatgtttttggtccctataaatatgtcaacttttc 48689514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 49580412 - 49580373
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  49580412 ttaaatatgtttttggtccctataaatatgtcaacttttc 49580373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 51681346 - 51681307
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  51681346 ttaaatatgtttttggtctctataaatatatcaacttttc 51681307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 26073286 - 26073324
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  26073286 ttaaatatgtttttggtccctataaatatgtcaactttt 26073324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 30926519 - 30926481
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  30926519 ttaaatatgtttttggtccctataaatatgtcaactttt 30926481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 31108999 - 31109037
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  31108999 ttaaatatgttgttggtctctataaatatgtcaactttt 31109037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 31683354 - 31683316
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  31683354 ttaaatatgtttttggtccctataaatatgtcaactttt 31683316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 34151212 - 34151250
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  34151212 ttaaatatgtttttggtctctataaatatattaactttt 34151250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 39757867 - 39757829
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  39757867 ttaaatatgtttttggtccctataaatatgtcaactttt 39757829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 39763221 - 39763183
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  39763221 ttaaatatgtttttggtccctataaatatgtcaactttt 39763183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 3369013 - 3369054
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||| |||||||||||||||| || |||||||    
T  3369013 ttaaatatgttttttgtctctataaatatgtaaaattttcat 3369054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 3536702 - 3536661
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| | |||||||||| ||||||||||    
T  3536702 ttaaatatgtttttggtccccataaatatgtcaacttttcat 3536661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 6413623 - 6413660
Alignment:
Q  278 atatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  6413623 atatgttttttgtctctataaatatgtcaacttttcat 6413660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 13566423 - 13566382
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||| ||| |||||||||||| ||||||||||    
T  13566423 ttaaatatgtttttagtccctataaatatgtcaacttttcat 13566382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 18521102 - 18521061
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||||||  ||||||||||| ||||||||||    
T  18521102 ttaaatatgtttttggtccatataaatatgttaacttttcat 18521061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 22888241 - 22888200
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||||||||||||||   ||||||||||    
T  22888241 ttaaatatgtttttggtctctataaatatacaaacttttcat 22888200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 23488293 - 23488252
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||||||  ||||||||||| ||||||||||    
T  23488293 ttaaatatgtttttggtccttataaatatgtcaacttttcat 23488252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 38163848 - 38163807
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||| || |||||||||||| ||||||||||    
T  38163848 ttaaatatgtttttgatccctataaatatgtcaacttttcat 38163807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 11748225 - 11748253
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  11748225 ttaaatatgtttttggtctctataaatat 11748253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 13539032 - 13539060
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  13539032 ttaaatatgtttttggtctctataaatat 13539060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 20754270 - 20754242
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  20754270 ttaaatatgtttttggtctctataaatat 20754242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 33853041 - 33853069
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  33853041 ttaaatatgtttttggtctctataaatat 33853069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 33927877 - 33927849
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  33927877 ttaaatatgtttttggtctctataaatat 33927849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 35373682 - 35373710
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  35373682 ttaaatatgtttttggtctctataaatat 35373710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 36740122 - 36740094
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  36740122 ttaaatatgtttttggtctctataaatat 36740094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 42283159 - 42283187
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  42283159 ttaaatatgtttttggtctctataaatat 42283187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 12179785 - 12179746
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  12179785 ttaaatatgtttttggtctctataaatatgtaaacttttc 12179746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 12424213 - 12424174
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  12424213 ttaaatatgtttttggtctctataaatatgtaaacttttc 12424174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 23130202 - 23130163
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  23130202 ttaaatatgtttttggtctctataaatatgtcaacttttc 23130163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 8841739 - 8841780
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  8841739 ttaaatatgtttttggtccctataaatatgtcaacttttcat 8841780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 18173561 - 18173520
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  18173561 ttaaatatgtttttggtccctataaatatgtcaacttttcat 18173520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 38508266 - 38508225
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  38508266 ttaaatatgtttttggtccctataaatatgtcaacttttcat 38508225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 5925418 - 5925458
Alignment:
Q  275 taaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  5925418 taaatatgtttttggtccctataaatatgtcaacttttcat 5925458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 109398 - 109437
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  109398 ttaaatatgtttttggtccctataaatatgtcaacttttc 109437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 3612719 - 3612758
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  3612719 ttaaatatgtttttggtccctataaatatgtcaacttttc 3612758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 6078927 - 6078966
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  6078927 ttaaatatgtttttggtccctataaatatgtcaacttttc 6078966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 6082857 - 6082896
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  6082857 ttaaatatgtttttggtccctataaatatgtcaacttttc 6082896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 14092490 - 14092529
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  14092490 ttaaatatgtttttggtccctataaatatgtcaacttttc 14092529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 15106444 - 15106405
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  15106444 ttaagtatgtttttggtctctataaatatgtaaacttttc 15106405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 18150303 - 18150342
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  18150303 ttaaatatgtttttggtccctataaatatgtcaacttttc 18150342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 315
Target Start/End: Original strand, 18595709 - 18595748
Alignment:
Q  276 aaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  18595709 aaatatgtttttagtctctataaatatgtcaacttttcat 18595748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 34414992 - 34414953
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  34414992 ttaaatatgtttttggtccctataaatatgtcaacttttc 34414953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 34793266 - 34793227
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  34793266 ttaaatatgtttttggtccctataaatatgtcaacttttc 34793227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 35575382 - 35575343
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  35575382 ttaaatatgtttttggtccctataaatatgtcaacttttc 35575343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 36091278 - 36091317
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  36091278 ttaaatatgtttttggtccctataaatatgtcaacttttc 36091317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 36310976 - 36310937
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  36310976 ttaaatatgtttttggtccctataaatatgtcaacttttc 36310937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 36844820 - 36844781
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  36844820 ttaaatatgtttttggtccctataaatatgtcaacttttc 36844781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 38507773 - 38507812
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  38507773 ttaaatatgtttttggtccctataaatatgtcaacttttc 38507812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 38508612 - 38508573
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  38508612 ttaaatatgtttttggtccctataaatatgtcaacttttc 38508573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 41926104 - 41926065
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  41926104 ttaaatatgtttttagtctctataaatatgtcaacttttc 41926065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 42026302 - 42026263
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  42026302 ttaaatatgtttttggtccctataaatatgtcaacttttc 42026263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 42149873 - 42149834
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  42149873 ttaaatatgtttttagtctctataaatatgtcaacttttc 42149834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 7227078 - 7227040
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  7227078 ttaaatatgttttttgtctctataaatatgtcaactttt 7227040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 18252473 - 18252511
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  18252473 ttaaatatgtttttggtccctataaatatgtcaactttt 18252511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 24201642 - 24201604
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  24201642 ttaaatatgtttttggtctctataaatatatcaactttt 24201604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 27141425 - 27141387
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  27141425 ttaaatatgtttttggtctctataaatatatcaactttt 27141387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 304
Target Start/End: Complemental strand, 35161081 - 35161051
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgt 304  Q
    |||||||||||||||||||||||||||||||    
T  35161081 ttaaatatgtttttggtctctataaatatgt 35161051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 4418664 - 4418705
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||| || |||||||||||| ||||||||||    
T  4418664 ttaaatatgtttttgatccctataaatatgtcaacttttcat 4418705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 9375742 - 9375779
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttt 311  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  9375742 ttaaatatgtttttggtccctataaatatgtcaacttt 9375779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 2828953 - 2828925
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  2828953 ttaaatatgtttttggtctctataaatat 2828925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 6785885 - 6785857
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  6785885 ttaaatatgtttttggtctctataaatat 6785857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 27343271 - 27343307
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactt 310  Q
    |||||||||||||||||| |||||||||||| |||||    
T  27343271 ttaaatatgtttttggtccctataaatatgtcaactt 27343307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 35034675 - 35034703
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  35034675 ttaaatatgtttttggtctctataaatat 35034703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 29145820 - 29145859
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  29145820 ttaaatatgtttttggtctctataaatatgtaaacttttc 29145859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 51919680 - 51919719
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  51919680 ttaaatatgtttttggtctctataaatatgtcaacttttc 51919719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 28984927 - 28984968
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  28984927 ttaaatatgtttttggtccctataaatatgtcaacttttcat 28984968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 39150606 - 39150647
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  39150606 ttaaatatgtttttggtccctataaatatgtcaacttttcat 39150647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 42512186 - 42512145
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  42512186 ttaaatatgtttttggtccctataaatatgtcaacttttcat 42512145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 313
Target Start/End: Original strand, 46472720 - 46472760
Alignment:
Q  273 tttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  46472720 tttaaatatgtttttggtccctataaatatgtcaacttttc 46472760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 480255 - 480216
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  480255 ttaaatatgtttttggtccctataaatatgtcaacttttc 480216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 5512187 - 5512148
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  5512187 ttaaatatgtttttggtccctataaatatgtcaacttttc 5512148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 5519780 - 5519741
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  5519780 ttaaatatgtttttggtccctataaatatgtcaacttttc 5519741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 6785982 - 6786021
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  6785982 ttaaatatgtttttggtccctataaatatgtcaacttttc 6786021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 6786475 - 6786436
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  6786475 ttaaatatgtttttggtccctataaatatgtcaacttttc 6786436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 11493119 - 11493080
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  11493119 ttaaatatgtttttggtccctataaatatgtcaacttttc 11493080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 11987700 - 11987661
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  11987700 ttaaatatgtttttggtccctataaatatgtcaacttttc 11987661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 12294239 - 12294200
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  12294239 ttaaatatgtttttggtccctataaatatgtcaacttttc 12294200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 19054215 - 19054254
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  19054215 ttaaatatgtttttggtccctataaatatgtcaacttttc 19054254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 19326581 - 19326620
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  19326581 ttaaatatgtttttggtccctataaatatgtcaacttttc 19326620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 19879454 - 19879415
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  19879454 ttaaatatgtttttggtccctataaatatgtcaacttttc 19879415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 20943760 - 20943721
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  20943760 ttaaatatgtttttgatctctataaatatgtcaacttttc 20943721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 23458309 - 23458270
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  23458309 ttaaatatgtttttggtccctataaatatgtcaacttttc 23458270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 24749720 - 24749759
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  24749720 ttaaatatgtttttggtccctataaatatgtcaacttttc 24749759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 24750201 - 24750162
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  24750201 ttaaatatgtttttggtccctataaatatgtcaacttttc 24750162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 26618915 - 26618876
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  26618915 ttaaatatgtttttggtccctataaatatgttaacttttc 26618876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 35822543 - 35822582
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  35822543 ttaaatatgtttttggtccctataaatatgtcaacttttc 35822582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 38992081 - 38992120
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  38992081 ttaaatatgtttttggtccctataaatatgtcaacttttc 38992120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 39767045 - 39767006
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  39767045 ttaaatatgtttttggtccctataaatatgtcaacttttc 39767006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 42511694 - 42511733
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  42511694 ttaaatatgtttttggtccctataaatatgtcaacttttc 42511733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 43622425 - 43622386
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  43622425 ttaaatatgtttttggtctctataaatatgtcagcttttc 43622386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 55811566 - 55811527
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  55811566 ttaaatatgtttttggtccctataaatatgtcaacttttc 55811527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 56319643 - 56319604
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  56319643 ttaaatatgtttttggtccctataaatatgtcaacttttc 56319604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 5496964 - 5497002
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  5496964 ttaaatatgtttttggtccctataaatatgtcaactttt 5497002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 13483295 - 13483257
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  13483295 ttaaatatgtttttggtccctataaatatgttaactttt 13483257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 37874921 - 37874959
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  37874921 ttaaatatgtttttggtccctataaatatgtcaactttt 37874959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 39766563 - 39766601
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  39766563 ttaaatatgtttttggtccctataaatatgtcaactttt 39766601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 304
Target Start/End: Original strand, 45098372 - 45098402
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgt 304  Q
    |||||||||||||||||||||||||||||||    
T  45098372 ttaaatatgtttttggtctctataaatatgt 45098402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 45429037 - 45429075
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  45429037 ttaaatatgtttttggtccctataaatatgtcaactttt 45429075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 55811083 - 55811121
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  55811083 ttaaatatgtttttggtccctataaatatgtcaactttt 55811121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 1620446 - 1620487
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| || |||||||    
T  1620446 ttaaatatgtttttggtccctataaatatgtcaatttttcat 1620487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 5985411 - 5985452
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||| |||||||||| |||||||||||| ||||||||||    
T  5985411 ttaaataagtttttggtccctataaatatgtcaacttttcat 5985452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 12698905 - 12698864
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||| || |||||||||||| ||||||||||    
T  12698905 ttaaatatgtttttgatccctataaatatgtcaacttttcat 12698864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 19037392 - 19037433
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||| || |||||||||||| ||||||||||    
T  19037392 ttaaatatgtttttgatccctataaatatgtcaacttttcat 19037433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 26487791 - 26487832
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||| | ||||||||||    
T  26487791 ttaaatatgtttttggtccctataaatatatcaacttttcat 26487832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 34020362 - 34020403
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||| ||| |||||||||||| ||||||||||    
T  34020362 ttaaatatgtttttagtccctataaatatgtcaacttttcat 34020403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 44370806 - 44370765
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||| |||||| |||||||||||| ||||||||||    
T  44370806 ttaaatatgttattggtccctataaatatgtcaacttttcat 44370765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 55173158 - 55173117
Alignment:
Q  272 atttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||||| |||||||||| | ||||||||    
T  55173158 atttaaatatgtttttggtccctataaatatatcaacttttc 55173117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 875225 - 875197
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  875225 ttaaatatgtttttggtctctataaatat 875197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 4894032 - 4894060
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  4894032 ttaaatatgtttttggtctctataaatat 4894060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 310
Target Start/End: Original strand, 19878960 - 19878996
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactt 310  Q
    |||||||||||||||||| |||||||||||| |||||    
T  19878960 ttaaatatgtttttggtccctataaatatgtcaactt 19878996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 44380982 - 44380954
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  44380982 ttaaatatgtttttggtctctataaatat 44380954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 313
Target Start/End: Original strand, 3791 - 3829
Alignment:
Q  275 taaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  3791 taaatatgtttttggtctctataaatatgtcaacttttc 3829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 26570262 - 26570221
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||| |||||||||||||||||||||| ||||||||||    
T  26570262 ttaaatatatttttggtctctataaatatgtcaacttttcat 26570221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 13649022 - 13648982
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttca 314  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  13649022 ttaaatatgtttttggtccctataaatatgtcaacttttca 13648982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 7675885 - 7675846
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  7675885 ttaaatatgtttttggttcctataaatatgtgaacttttc 7675846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 14191037 - 14190998
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  14191037 ttaaatatgtttttggtccctataaatatgtcaacttttc 14190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 19059564 - 19059603
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  19059564 ttaaatatgtttttggtccctataaatatgtcaacttttc 19059603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 22084135 - 22084174
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  22084135 ttaaatatgtttttggtccctataaatatgtcaacttttc 22084174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 26569770 - 26569809
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  26569770 ttaaatatgtttttggtccctataaatatgtcaacttttc 26569809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 34327963 - 34327924
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  34327963 ttaaatatgtttttgctctctataaatatgtgaatttttc 34327924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 8677618 - 8677656
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  8677618 ttaaatatgtttttggtccctataaatatgtcaactttt 8677656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 5038968 - 5039009
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||| | ||||||||||    
T  5038968 ttaaatatgtttttggtccctataaatatatcaacttttcat 5039009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Original strand, 12148791 - 12148828
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttt 311  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  12148791 ttaaatatgtttttggtcactataaatatgtcaacttt 12148828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 34674171 - 34674199
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  34674171 ttaaatatgtttttggtctctataaatat 34674199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000005; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 7274934 - 7274975
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  7274934 ttaaatatgtttttggtccctataaatatgtcaacttttcat 7274975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 26338856 - 26338897
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  26338856 ttaaatatgtttttggtccctataaatatgtcaacttttcat 26338897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 43401178 - 43401219
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  43401178 ttaaatatgtttttggtccctataaatatgtcaacttttcat 43401219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 2172484 - 2172523
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  2172484 ttaaatatgtttttggtccctataaatatgttaacttttc 2172523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 4843091 - 4843130
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  4843091 ttaaatatgtttttggtccctataaatatgtcaacttttc 4843130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 4843569 - 4843530
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  4843569 ttaaatatgtttttggtccctataaatatgtcaacttttc 4843530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 7001710 - 7001749
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  7001710 ttaaatatgtttttggtccctataaatatgtcaacttttc 7001749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 8105212 - 8105251
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  8105212 ttaaatatgtttttggtctctataaatatgtcaatttttc 8105251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 8597022 - 8596983
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  8597022 ttaaatatgtttttggtccctataaatatgtcaacttttc 8596983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 9509107 - 9509146
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  9509107 ttaaatatatttttggtctctataaatatgtcaacttttc 9509146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 12331130 - 12331169
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  12331130 ttaaatatgtttttggtccctataaatatgttaacttttc 12331169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 18907514 - 18907553
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  18907514 ttaaatatgtttttggtccctataaatatgtcaacttttc 18907553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 21063938 - 21063899
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  21063938 ttaaatatgtttttggtcactataaatatgtcaacttttc 21063899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 23098376 - 23098337
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  23098376 ttaaatatgtttttggtccctataaatatgtcaacttttc 23098337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 26403041 - 26403002
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  26403041 ttaaatatgtttttggtccctataaatatgtcaacttttc 26403002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 31124515 - 31124554
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  31124515 ttaaatatgtttttggtccctataaatatgtcaacttttc 31124554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 32064945 - 32064984
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  32064945 ttaaatatgtttttggtccctataaatatgtcaacttttc 32064984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 32128994 - 32128955
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  32128994 ttaattatgtttttggtctctataaatatgttaacttttc 32128955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 38308546 - 38308585
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  38308546 ttaaatatgtttttggtccctataaatatgtcaacttttc 38308585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 38539627 - 38539666
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  38539627 ttaaatatgtttttggtctctataaatatgtcaacatttc 38539666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 39412772 - 39412811
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  39412772 ttaaatatgtttttggtccctataaatatgtcaacttttc 39412811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 40360312 - 40360351
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  40360312 ttaaatatatttttggtctctataaatatgtcaacttttc 40360351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 43401671 - 43401632
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  43401671 ttaaatatgtttttggtctctataaatatgttaatttttc 43401632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 43446960 - 43446999
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  43446960 ttaaatatgtttttggtccctataaatatgtcaacttttc 43446999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 43447453 - 43447414
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  43447453 ttaaatatgtttttggtccctataaatatgtcaacttttc 43447414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 6987548 - 6987586
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  6987548 ttaaatatgtttttggtccctataaatatgtcaactttt 6987586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 9111362 - 9111400
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  9111362 ttaaatatgtttttggtctttataaatatgttaactttt 9111400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 34448687 - 34448725
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  34448687 ttaaatatgtttttggtccctataaatatgtcaactttt 34448725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 34729005 - 34728967
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  34729005 ttaaatatgtttttggtccctataaatatgtcaactttt 34728967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 38309039 - 38309001
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||| |||||||||||||| |||||||    
T  38309039 ttaaatatgtttttggcctctataaatatgtcaactttt 38309001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 41960482 - 41960444
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  41960482 ttaaatatgtttttggtccctataaatatgtcaactttt 41960444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 42229060 - 42228990
Alignment:
Q  85 cataattttggaaaaatattgagacatatttcctcgtgaaaatctcgagacaataaatatcgcgagacata 155  Q
    |||||||| || |||||||||| | || ||  ||| ||||| ||||| |||||||||||||||||||||||    
T  42229060 cataatttagggaaaatattgaaaaatcttatctcatgaaactctcgggacaataaatatcgcgagacata 42228990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 42661829 - 42661791
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  42661829 ttaaatatgtttttggtccctataaatatgtcaactttt 42661791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 43211872 - 43211834
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  43211872 ttaaatatgtttttggtccctataaatatgtcaactttt 43211834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 4001001 - 4000960
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||| | ||||||||||    
T  4001001 ttaaatatgtttttggtccctataaatatatcaacttttcat 4000960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 4565602 - 4565643
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||| ||| |||||||||||| ||||||||||    
T  4565602 ttaaatatgtttttagtccctataaatatgtcaacttttcat 4565643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 8558142 - 8558101
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| | |||||||||| ||||||||||    
T  8558142 ttaaatatgtttttggtccccataaatatgtcaacttttcat 8558101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 23097884 - 23097925
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| | |||||||||| ||||||||||    
T  23097884 ttaaatatgtttttggtccccataaatatgtcaacttttcat 23097925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 29653942 - 29653983
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||    
T  29653942 ttaaatatgtttttggtctttataaatttgtcaacttttcat 29653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 31110232 - 31110191
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||| ||| |||||||||||| ||||||||||    
T  31110232 ttaaatatgtttttagtccctataaatatgtcaacttttcat 31110191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 34449179 - 34449138
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  34449179 ttaaatatgtttttggtccctttaaatatgtcaacttttcat 34449138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 6257816 - 6257844
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  6257816 ttaaatatgtttttggtctctataaatat 6257844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 12444736 - 12444708
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  12444736 ttaaatatgtttttggtctctataaatat 12444708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 18282844 - 18282884
Alignment:
Q  275 taaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||||| |||||||||| | ||||||||||    
T  18282844 taaatatgtttttggtccctataaatatatcaacttttcat 18282884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 38425094 - 38425122
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  38425094 ttaaatatgtttttggtctctataaatat 38425122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 1630855 - 1630896
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  1630855 ttaaatatgtttttggtctctataaatatatcaacttttcat 1630896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 9254267 - 9254226
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  9254267 ttaaatatgtttttggtctcaataaatatgtcaacttttcat 9254226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 37170117 - 37170076
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  37170117 ttaaatatgtttttggtccctataaatatgttaacttttcat 37170076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 54617354 - 54617395
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  54617354 ttaaatatgtttttggtccctataaatatgtcaacttttcat 54617395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 1631336 - 1631297
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  1631336 ttaaatatgtttttggtccctataaatatgtcaacttttc 1631297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 6471470 - 6471431
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  6471470 ttaaatatgtttttggtccctataaatatgtcaacttttc 6471431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 8399396 - 8399357
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  8399396 ttaaatatgtttttggtccctataaatatgtcaacttttc 8399357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 16301322 - 16301283
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  16301322 ttaaatatgtttttagtctctataaatatgtcaacttttc 16301283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 25656859 - 25656820
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  25656859 ttaaatatgtttttggtccctataaatatgtcaacttttc 25656820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 26703714 - 26703753
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  26703714 ttaaatatgtttttggtccctataaatatgttaacttttc 26703753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 26704206 - 26704167
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  26704206 ttaaatatgtttttggtccctataaatatgtcaacttttc 26704167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 31401714 - 31401675
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  31401714 ttaaatatgtttttggtctctataaatatatcaacttttc 31401675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 36181386 - 36181425
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  36181386 ttaaatatgtttttggtccctataaatatgtcaacttttc 36181425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 315
Target Start/End: Complemental strand, 36181861 - 36181818
Alignment:
Q  272 atttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||    
T  36181861 atttaattatgtttttggtccctataaatatgtcaacttttcat 36181818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 46710236 - 46710275
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  46710236 ttaaatatgtttttggtccctataaatatgtcaacttttc 46710275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 50743457 - 50743418
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  50743457 ttaaatatgtttttggtccctataaatatgtcaacttttc 50743418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 51444873 - 51444834
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  51444873 ttaaatatgtttttggtccctataaatatgtcaacttttc 51444834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 51949851 - 51949812
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  51949851 ttaaatatgtttttggtccctataaatatgtcaacttttc 51949812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 52718379 - 52718418
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  52718379 ttaaatatgtttttggtccctataaatatgtcaacttttc 52718418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 52718872 - 52718833
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  52718872 ttaaatatgtttttggtccctataaatatgtcaacttttc 52718833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 1000608 - 1000646
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  1000608 ttaaatatgtttttggtccctataaatatgttaactttt 1000646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 313
Target Start/End: Complemental strand, 17528114 - 17528076
Alignment:
Q  275 taaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||||||||||||||| || |||||    
T  17528114 taaatatgtttttggtctctataaatatgtcaatttttc 17528076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 19227643 - 19227681
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  19227643 ttaaatatgtttttggtccctataaatatgttaactttt 19227681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 22607102 - 22607140
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  22607102 ttaaatatgtttttggtccctataaatatgtcaactttt 22607140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 313
Target Start/End: Complemental strand, 22607594 - 22607556
Alignment:
Q  275 taaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  22607594 taaatatgtttttggtccctataaatatgttaacttttc 22607556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 30640951 - 30640913
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  30640951 ttaaatatgtttttggtccctataaatatgtcaactttt 30640913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 34744740 - 34744778
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaactttt 312  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  34744740 ttaaatatatttttggtctctataaatatgtcaactttt 34744778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 313
Target Start/End: Original strand, 6470977 - 6471014
Alignment:
Q  276 aaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  6470977 aaatatgtttttggtccctataaatatgtcaacttttc 6471014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 8150692 - 8150733
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||| |||||||||||||||||||||| |||| |||||    
T  8150692 ttaaatatatttttggtctctataaatatgttaactattcat 8150733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 18386700 - 18386660
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||||||||||||||||| ||||||||||| ||||||||||    
T  18386700 ttaaatatgtttttggtct-tataaatatgtcaacttttcat 18386660  T

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Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 33806444 - 33806403
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| || |||||||    
T  33806444 ttaaatatgtttttggtccctataaatatgtcaatttttcat 33806403  T

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Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 35317661 - 35317620
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||| |||||||||||| ||| ||||||    
T  35317661 ttaaatatgtttttggtccctataaatatgtcaacatttcat 35317620  T

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Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 40007257 - 40007220
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttt 311  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  40007257 ttaattatgtttttggtctctataaatatgtcaacttt 40007220  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 54239381 - 54239422
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    |||||||||||||||||  |||||||||||| ||||||||||    
T  54239381 ttaaatatgtttttggttcctataaatatgtcaacttttcat 54239422  T

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Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 35105080 - 35105108
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  35105080 ttaaatatgtttttggtctctataaatat 35105108  T

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Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 37100282 - 37100254
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  37100282 ttaaatatgtttttggtctctataaatat 37100254  T

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Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Original strand, 39467987 - 39468015
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  39467987 ttaaatatgtttttggtctctataaatat 39468015  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 43141007 - 43140979
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  43141007 ttaaatatgtttttggtctctataaatat 43140979  T

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Target: scaffold0041 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 28086 - 28125
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  28086 ttaaatatgtttttggtccctataaatatgtcaacttttc 28125  T

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Target: scaffold0041; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 28578 - 28539
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  28578 ttaaatatgtttttggtccctataaatatgtcaacttttc 28539  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 313
Target Start/End: Complemental strand, 65365 - 65326
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttc 313  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  65365 ttaaatatgtttttggtccctataaatatgtcaacttttc 65326  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 62069 - 62028
Alignment:
Q  274 ttaaatatgtttttggtctctataaatatgtgaacttttcat 315  Q
    ||||| ||||||||||||||||||||||| | ||||||||||    
T  62069 ttaaaaatgtttttggtctctataaatatattaacttttcat 62028  T

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Target: scaffold0068 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 302
Target Start/End: Complemental strand, 45403 - 45375
Alignment:
Q  274 ttaaatatgtttttggtctctataaatat 302  Q
    |||||||||||||||||||||||||||||    
T  45403 ttaaatatgtttttggtctctataaatat 45375  T

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