View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17360_high_5 (Length: 462)
Name: NF17360_high_5
Description: NF17360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17360_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 52 - 433
Target Start/End: Original strand, 32865954 - 32866335
Alignment:
| Q |
52 |
gtcaaattttgaatttggaagttttatatttgagtttcggcagtatcctcatggagaagtaaagttaaattcgtttgagtgttcattgagctttatgatc |
151 |
Q |
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| T |
32865954 |
gtcaaattttgaatttggaagttttatatttgagtttcggcagtatcctcatggagaagtaaagttaaattcgtttgagtgttcattgagctctatgatc |
32866053 |
T |
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| Q |
152 |
tcctttcttggacttggtctttaccctaaaaaatttatatcaaacnnnnnnnggaaatgagggttgcaggtgctgcatcattggttgtatatgttgtaag |
251 |
Q |
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| T |
32866054 |
tcctttcttggacttggtctttaccctaaaaattttatatcaaacaaaaaaaggaaatgagggttgcaggtgctgcatcattggtttactatgttgtaag |
32866153 |
T |
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| Q |
252 |
aagaaaaatagttgtttggactttgaattatatgaagccctttttctttcctacaaatcttttactctatttacaagatttattttacatatgcggtttt |
351 |
Q |
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| T |
32866154 |
aagaaaaatagttgtttggactttgaattatatgaagccctttttctttcctaccaatcttttactctatttacaagatttattttacatatggggtttt |
32866253 |
T |
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| Q |
352 |
gtaaaaaataaatggcctatactcactttacaaataatcttaacaattagtagtgctattaaataaacctacggttagatat |
433 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
32866254 |
gtaaaaaataaatggcctatactcactttacaaataatcttaacaattagtagtgctattaaataaacctacggttaaatat |
32866335 |
T |
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