View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17360_low_2 (Length: 246)
Name: NF17360_low_2
Description: NF17360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17360_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 31 - 232
Target Start/End: Original strand, 24664888 - 24665091
Alignment:
| Q |
31 |
gttattgacaaatgattagtgagtctaggttaaaaaatttgtgcatgctaaagggatcgagtgcttattaagtactattattagaagaagaaaaatataa |
130 |
Q |
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| T |
24664888 |
gttattgataaatgattagtggatttcagttaaaaaatttgtgcatgctaaaggaatcgagtgcttattaaatagtattattagaagaaaaaaaatataa |
24664987 |
T |
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| Q |
131 |
atgaata--atgtgtacccatgagacccattacatacacaaaatggatttctctatggtggatgcttttaacggtcattttacaaacatctatgatgaaa |
228 |
Q |
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| T |
24664988 |
attcatataatgtgtacccatgagacccattacatacacaaaatggatttctctatggtggatgcttttaatggtcattttacaaacatctatgatgaaa |
24665087 |
T |
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| Q |
229 |
ttta |
232 |
Q |
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|||| |
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| T |
24665088 |
ttta |
24665091 |
T |
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