View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17363_high_8 (Length: 326)

Name: NF17363_high_8
Description: NF17363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17363_high_8
NF17363_high_8
[»] chr5 (45 HSPs)
chr5 (15-326)||(38816628-38816932)
chr5 (116-191)||(19820428-19820503)
chr5 (124-191)||(22013364-22013431)
chr5 (36-165)||(22423764-22423895)
chr5 (117-166)||(15410483-15410532)
chr5 (117-169)||(6326332-6326384)
chr5 (68-193)||(37328829-37328955)
chr5 (68-156)||(3966488-3966577)
chr5 (118-176)||(15382442-15382500)
chr5 (117-191)||(42469171-42469245)
chr5 (116-169)||(21191090-21191143)
chr5 (124-191)||(2436878-2436939)
chr5 (119-155)||(6035469-6035505)
chr5 (116-156)||(17123033-17123073)
chr5 (125-169)||(21522722-21522766)
chr5 (125-169)||(21533288-21533332)
chr5 (116-191)||(6247572-6247647)
chr5 (116-159)||(14674251-14674294)
chr5 (116-159)||(19579683-19579726)
chr5 (117-176)||(21137654-21137713)
chr5 (116-155)||(27144449-27144488)
chr5 (117-159)||(5873548-5873590)
chr5 (68-155)||(11685925-11686012)
chr5 (123-169)||(36642803-36642849)
chr5 (34-83)||(8420075-8420124)
chr5 (116-165)||(19552577-19552626)
chr5 (68-158)||(39698524-39698615)
chr5 (36-88)||(9929668-9929720)
chr5 (116-176)||(13287433-13287493)
chr5 (68-176)||(41995436-41995543)
chr5 (116-159)||(7175053-7175096)
chr5 (116-159)||(9449451-9449494)
chr5 (116-159)||(16203829-16203872)
chr5 (116-155)||(31084309-31084348)
chr5 (117-159)||(16734848-16734890)
chr5 (34-64)||(24906250-24906280)
chr5 (116-178)||(26312732-26312794)
chr5 (117-147)||(27932229-27932259)
chr5 (116-150)||(28588708-28588742)
chr5 (117-158)||(19737517-19737558)
chr5 (116-189)||(26716097-26716169)
chr5 (116-189)||(26985837-26985909)
chr5 (116-157)||(30098310-30098351)
chr5 (114-143)||(32766975-32767004)
chr5 (117-169)||(24906336-24906388)
[»] chr7 (47 HSPs)
chr7 (117-191)||(27944991-27945065)
chr7 (117-191)||(24105629-24105702)
chr7 (116-169)||(11722132-11722185)
chr7 (68-178)||(24339605-24339716)
chr7 (66-159)||(29787354-29787446)
chr7 (85-166)||(19206025-19206107)
chr7 (68-156)||(32308105-32308194)
chr7 (116-176)||(1433419-1433479)
chr7 (36-196)||(7328639-7328805)
chr7 (116-191)||(43027503-43027578)
chr7 (117-176)||(43249958-43250017)
chr7 (116-158)||(23191879-23191921)
chr7 (116-166)||(26733279-26733329)
chr7 (36-146)||(11700798-11700909)
chr7 (85-155)||(22484011-22484082)
chr7 (118-167)||(49107795-49107844)
chr7 (76-159)||(11072280-11072362)
chr7 (116-159)||(21828439-21828482)
chr7 (73-176)||(30731002-30731104)
chr7 (116-190)||(598160-598233)
chr7 (117-167)||(5235960-5236010)
chr7 (68-155)||(6630897-6630985)
chr7 (116-154)||(20549778-20549816)
chr7 (118-176)||(26329418-26329476)
chr7 (118-167)||(4017830-4017879)
chr7 (116-168)||(11061110-11061162)
chr7 (116-168)||(22868015-22868067)
chr7 (119-155)||(25791639-25791675)
chr7 (120-191)||(2034392-2034462)
chr7 (116-167)||(2425767-2425818)
chr7 (125-168)||(13770664-13770707)
chr7 (68-168)||(15902795-15902896)
chr7 (117-148)||(28155563-28155594)
chr7 (116-158)||(8046061-8046103)
chr7 (116-158)||(9482917-9482959)
chr7 (68-134)||(9933282-9933347)
chr7 (145-191)||(40132023-40132069)
chr7 (119-160)||(1401006-1401047)
chr7 (35-64)||(17852091-17852120)
chr7 (118-191)||(21864756-21864829)
chr7 (116-152)||(2948672-2948708)
chr7 (123-159)||(10042919-10042955)
chr7 (124-160)||(12010022-12010058)
chr7 (36-64)||(15680900-15680928)
chr7 (117-160)||(24289803-24289844)
chr7 (116-156)||(25481887-25481927)
chr7 (139-191)||(33994162-33994214)
[»] chr8 (31 HSPs)
chr8 (68-169)||(22651948-22652050)
chr8 (68-174)||(29510289-29510396)
chr8 (123-191)||(25192388-25192456)
chr8 (116-182)||(926822-926888)
chr8 (116-191)||(13436998-13437073)
chr8 (116-159)||(31109552-31109595)
chr8 (116-178)||(24362236-24362298)
chr8 (83-159)||(37283812-37283887)
chr8 (116-155)||(39954313-39954352)
chr8 (116-178)||(4673459-4673521)
chr8 (116-158)||(34897068-34897110)
chr8 (68-158)||(15816114-15816205)
chr8 (116-169)||(27213519-27213572)
chr8 (123-191)||(126390-126457)
chr8 (116-168)||(20873042-20873094)
chr8 (116-156)||(27101500-27101540)
chr8 (68-164)||(29776013-29776108)
chr8 (116-155)||(13844630-13844669)
chr8 (117-168)||(24669406-24669457)
chr8 (123-190)||(31556948-31557015)
chr8 (116-159)||(36450788-36450831)
chr8 (149-192)||(40332154-40332197)
chr8 (117-176)||(44067481-44067540)
chr8 (117-159)||(17751657-17751699)
chr8 (117-159)||(17760644-17760686)
chr8 (118-156)||(26714120-26714158)
chr8 (95-165)||(36934646-36934715)
chr8 (123-176)||(22197783-22197836)
chr8 (116-157)||(30271325-30271366)
chr8 (116-149)||(31236611-31236644)
chr8 (123-191)||(28642358-28642426)
[»] chr6 (56 HSPs)
chr6 (116-176)||(9027143-9027203)
chr6 (68-169)||(10294079-10294181)
chr6 (68-176)||(16766662-16766771)
chr6 (36-176)||(5732474-5732604)
chr6 (123-191)||(8365560-8365628)
chr6 (117-189)||(12696277-12696348)
chr6 (36-166)||(8805524-8805656)
chr6 (68-176)||(9107355-9107464)
chr6 (116-191)||(30866178-30866253)
chr6 (117-191)||(6389693-6389767)
chr6 (116-166)||(9658854-9658904)
chr6 (123-191)||(3398569-3398637)
chr6 (116-176)||(7938081-7938141)
chr6 (117-165)||(13851712-13851760)
chr6 (116-191)||(853893-853968)
chr6 (116-159)||(20371144-20371187)
chr6 (73-176)||(34073337-34073441)
chr6 (116-169)||(426548-426601)
chr6 (116-157)||(7265627-7265668)
chr6 (116-176)||(5000660-5000720)
chr6 (36-155)||(7723199-7723323)
chr6 (116-168)||(8777007-8777059)
chr6 (116-152)||(19040341-19040377)
chr6 (116-176)||(34595099-34595159)
chr6 (116-167)||(9629357-9629408)
chr6 (116-159)||(17841623-17841666)
chr6 (85-168)||(31579229-31579311)
chr6 (116-190)||(31959111-31959184)
chr6 (72-166)||(26562664-26562759)
chr6 (116-192)||(7930254-7930330)
chr6 (116-156)||(7996412-7996452)
chr6 (116-156)||(8022349-8022389)
chr6 (116-168)||(16833281-16833333)
chr6 (116-164)||(17341698-17341746)
chr6 (36-83)||(426478-426525)
chr6 (116-155)||(677823-677862)
chr6 (117-176)||(7977865-7977924)
chr6 (116-167)||(10339160-10339211)
chr6 (117-160)||(10760876-10760919)
chr6 (116-155)||(10842518-10842557)
chr6 (117-156)||(21395342-21395381)
chr6 (118-176)||(3209347-3209404)
chr6 (117-191)||(10649278-10649352)
chr6 (116-158)||(19147437-19147479)
chr6 (117-191)||(20518295-20518369)
chr6 (34-64)||(34073276-34073306)
chr6 (68-154)||(34290064-34290149)
chr6 (36-77)||(2117134-2117175)
chr6 (118-159)||(24809527-24809568)
chr6 (116-168)||(10770708-10770760)
chr6 (116-191)||(12868709-12868784)
chr6 (120-168)||(18803549-18803597)
chr6 (120-156)||(19044449-19044485)
chr6 (116-152)||(21424836-21424872)
chr6 (123-159)||(28152081-28152117)
chr6 (116-168)||(33001323-33001375)
[»] chr2 (46 HSPs)
chr2 (80-191)||(21782817-21782927)
chr2 (116-191)||(20539708-20539783)
chr2 (116-166)||(21616737-21616787)
chr2 (118-191)||(19536434-19536507)
chr2 (119-192)||(23717976-23718048)
chr2 (119-192)||(24105648-24105720)
chr2 (127-191)||(33519736-33519800)
chr2 (91-176)||(18276486-18276570)
chr2 (125-190)||(21624217-21624282)
chr2 (85-176)||(4332891-4332981)
chr2 (116-190)||(38117193-38117261)
chr2 (85-143)||(1327976-1328033)
chr2 (118-192)||(14996260-14996333)
chr2 (117-192)||(21374734-21374810)
chr2 (86-176)||(28412315-28412404)
chr2 (116-174)||(31018557-31018615)
chr2 (71-192)||(2331743-2331863)
chr2 (117-178)||(4142875-4142936)
chr2 (36-158)||(19573962-19574078)
chr2 (117-158)||(21091706-21091747)
chr2 (116-168)||(30404884-30404936)
chr2 (116-176)||(31284013-31284073)
chr2 (68-141)||(44860320-44860394)
chr2 (116-174)||(896180-896236)
chr2 (116-159)||(16069288-16069331)
chr2 (36-83)||(19536361-19536408)
chr2 (116-159)||(24894371-24894414)
chr2 (116-151)||(37411278-37411313)
chr2 (124-159)||(37558959-37558994)
chr2 (116-190)||(2423820-2423894)
chr2 (125-159)||(6940237-6940271)
chr2 (117-155)||(12464884-12464922)
chr2 (37-83)||(18255945-18255991)
chr2 (117-183)||(23354687-23354753)
chr2 (116-158)||(27084245-27084287)
chr2 (118-156)||(27460011-27460049)
chr2 (37-83)||(34691770-34691816)
chr2 (37-83)||(34714182-34714228)
chr2 (68-166)||(36409614-36409711)
chr2 (117-159)||(39323246-39323288)
chr2 (117-159)||(42832311-42832353)
chr2 (66-152)||(18420417-18420504)
chr2 (114-155)||(29970581-29970622)
chr2 (117-186)||(41942060-41942129)
chr2 (123-159)||(34994017-34994053)
chr2 (36-72)||(42511322-42511358)
[»] scaffold0306 (1 HSPs)
scaffold0306 (116-192)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (36-191)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (116-192)||(21902-21978)
[»] chr1 (56 HSPs)
chr1 (116-168)||(6427323-6427375)
chr1 (116-175)||(398799-398858)
chr1 (116-168)||(2896155-2896207)
chr1 (37-183)||(10572535-10572690)
chr1 (117-192)||(5376535-5376609)
chr1 (116-191)||(5927374-5927449)
chr1 (116-176)||(40917716-40917776)
chr1 (116-155)||(17831565-17831604)
chr1 (116-155)||(36878447-36878486)
chr1 (76-176)||(38503285-38503386)
chr1 (123-178)||(48040503-48040558)
chr1 (91-169)||(1262856-1262933)
chr1 (116-166)||(9709795-9709845)
chr1 (36-89)||(48547938-48547991)
chr1 (116-159)||(6415035-6415078)
chr1 (116-159)||(19562655-19562698)
chr1 (116-191)||(31014993-31015068)
chr1 (34-137)||(44482234-44482343)
chr1 (116-159)||(46348417-46348460)
chr1 (117-168)||(48450622-48450673)
chr1 (116-182)||(15641064-15641130)
chr1 (116-166)||(34298411-34298461)
chr1 (114-156)||(40285686-40285728)
chr1 (117-154)||(609493-609530)
chr1 (118-155)||(3490426-3490463)
chr1 (116-169)||(20157384-20157437)
chr1 (117-166)||(41877505-41877554)
chr1 (116-176)||(10577769-10577829)
chr1 (116-160)||(12443494-12443538)
chr1 (123-159)||(18556497-18556533)
chr1 (77-169)||(1486703-1486796)
chr1 (136-191)||(9630634-9630689)
chr1 (116-155)||(10475011-10475050)
chr1 (117-200)||(21378520-21378602)
chr1 (116-155)||(21530675-21530714)
chr1 (118-168)||(5944254-5944304)
chr1 (116-174)||(7918245-7918303)
chr1 (118-176)||(13011252-13011310)
chr1 (85-155)||(25452152-25452221)
chr1 (116-191)||(38078695-38078771)
chr1 (117-191)||(39130802-39130876)
chr1 (116-157)||(9103624-9103665)
chr1 (123-168)||(14359562-14359607)
chr1 (116-185)||(19324518-19324587)
chr1 (68-146)||(25361881-25361960)
chr1 (116-157)||(37598816-37598857)
chr1 (116-168)||(5898300-5898352)
chr1 (117-169)||(6612206-6612258)
chr1 (68-149)||(9828036-9828118)
chr1 (117-153)||(21057771-21057807)
chr1 (116-160)||(22515921-22515965)
chr1 (117-165)||(23636084-23636132)
chr1 (118-154)||(27471602-27471638)
chr1 (116-156)||(31672929-31672969)
chr1 (116-156)||(36905982-36906022)
chr1 (116-156)||(39953180-39953220)
[»] chr3 (51 HSPs)
chr3 (116-191)||(8383207-8383282)
chr3 (79-178)||(5441029-5441128)
chr3 (117-176)||(24205076-24205135)
chr3 (66-150)||(8039818-8039903)
chr3 (123-182)||(10335327-10335386)
chr3 (68-191)||(25064859-25064981)
chr3 (116-191)||(55401025-55401100)
chr3 (116-190)||(8587055-8587129)
chr3 (125-191)||(8842280-8842346)
chr3 (117-167)||(9800014-9800064)
chr3 (116-190)||(32429414-32429488)
chr3 (116-168)||(2620087-2620139)
chr3 (116-176)||(15796328-15796388)
chr3 (116-168)||(26492239-26492291)
chr3 (116-176)||(28917966-28918026)
chr3 (117-176)||(4991002-4991061)
chr3 (120-159)||(21720746-21720785)
chr3 (116-166)||(12674535-12674585)
chr3 (118-192)||(14223889-14223962)
chr3 (118-159)||(3865592-3865633)
chr3 (95-160)||(5407261-5407325)
chr3 (68-174)||(14829657-14829763)
chr3 (116-176)||(3164059-3164119)
chr3 (123-159)||(10318075-10318111)
chr3 (118-190)||(14618732-14618804)
chr3 (116-159)||(6525714-6525757)
chr3 (118-192)||(14747510-14747584)
chr3 (116-155)||(21479104-21479143)
chr3 (116-155)||(26290357-26290396)
chr3 (120-159)||(37077340-37077379)
chr3 (116-155)||(40052318-40052357)
chr3 (34-72)||(4466538-4466576)
chr3 (116-154)||(4987325-4987363)
chr3 (34-64)||(5440965-5440995)
chr3 (114-168)||(11658788-11658842)
chr3 (34-72)||(13807237-13807275)
chr3 (116-158)||(23870593-23870635)
chr3 (95-169)||(34307794-34307867)
chr3 (116-158)||(49505188-49505230)
chr3 (116-169)||(25093474-25093527)
chr3 (117-166)||(25652066-25652115)
chr3 (123-176)||(41961691-41961744)
chr3 (95-155)||(1438790-1438849)
chr3 (123-155)||(1514603-1514635)
chr3 (126-190)||(3631644-3631708)
chr3 (116-156)||(10268520-10268560)
chr3 (116-168)||(14979154-14979206)
chr3 (91-155)||(15544679-15544742)
chr3 (117-149)||(25074781-25074813)
chr3 (36-72)||(27505334-27505370)
chr3 (116-164)||(32804574-32804622)
[»] scaffold0168 (3 HSPs)
scaffold0168 (36-182)||(21002-21149)
scaffold0168 (36-97)||(21217-21278)
scaffold0168 (36-97)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (116-176)||(8763-8823)
[»] scaffold0007 (1 HSPs)
scaffold0007 (117-176)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (68-176)||(241559-241668)
[»] scaffold0004 (1 HSPs)
scaffold0004 (117-158)||(92790-92831)
[»] scaffold0018 (2 HSPs)
scaffold0018 (116-188)||(178853-178925)
scaffold0018 (117-158)||(192284-192325)
[»] chr4 (32 HSPs)
chr4 (116-176)||(23293020-23293080)
chr4 (118-156)||(17345451-17345489)
chr4 (117-155)||(35723420-35723458)
chr4 (117-174)||(847918-847975)
chr4 (116-169)||(36635296-36635349)
chr4 (117-176)||(24343472-24343531)
chr4 (68-174)||(30982863-30982967)
chr4 (117-159)||(7012048-7012090)
chr4 (116-166)||(20521883-20521933)
chr4 (118-176)||(20633450-20633508)
chr4 (36-159)||(30298928-30299048)
chr4 (36-159)||(30327796-30327916)
chr4 (118-187)||(28084475-28084544)
chr4 (116-159)||(16184801-16184842)
chr4 (123-191)||(28720827-28720894)
chr4 (116-191)||(12628619-12628693)
chr4 (120-159)||(13783263-13783302)
chr4 (117-176)||(21945468-21945527)
chr4 (116-158)||(903905-903947)
chr4 (116-174)||(5414206-5414264)
chr4 (116-197)||(7670625-7670709)
chr4 (68-158)||(22234875-22234967)
chr4 (116-150)||(40613441-40613475)
chr4 (118-168)||(49430998-49431048)
chr4 (116-153)||(1747200-1747237)
chr4 (117-154)||(20743313-20743350)
chr4 (117-166)||(30838185-30838234)
chr4 (114-194)||(3947798-3947877)
chr4 (116-191)||(5775392-5775469)
chr4 (36-80)||(18844423-18844467)
chr4 (36-72)||(28470448-28470484)
chr4 (124-176)||(35158027-35158079)
[»] scaffold0652 (1 HSPs)
scaffold0652 (116-176)||(496-556)
[»] scaffold0279 (1 HSPs)
scaffold0279 (115-191)||(17903-17979)
[»] scaffold0044 (1 HSPs)
scaffold0044 (66-151)||(53170-53256)
[»] scaffold0103 (1 HSPs)
scaffold0103 (116-159)||(51793-51836)
[»] scaffold0110 (1 HSPs)
scaffold0110 (79-161)||(28830-28913)
[»] scaffold0122 (1 HSPs)
scaffold0122 (79-176)||(8631-8729)
[»] scaffold0027 (2 HSPs)
scaffold0027 (116-168)||(46655-46707)
scaffold0027 (34-82)||(46731-46778)
[»] scaffold0697 (1 HSPs)
scaffold0697 (116-155)||(1630-1669)
[»] scaffold0171 (1 HSPs)
scaffold0171 (128-191)||(23371-23433)
[»] scaffold0022 (1 HSPs)
scaffold0022 (116-191)||(90793-90868)
[»] scaffold0020 (1 HSPs)
scaffold0020 (116-191)||(135346-135421)
[»] scaffold0019 (1 HSPs)
scaffold0019 (118-191)||(71679-71746)
[»] scaffold0450 (1 HSPs)
scaffold0450 (36-64)||(8564-8592)
[»] scaffold0116 (1 HSPs)
scaffold0116 (116-176)||(9863-9923)


Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 15 - 326
Target Start/End: Original strand, 38816628 - 38816932
Alignment:
Q  15 tatcacgattcacgaatataactatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatag 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38816628 tatcacgattcacgaatataactatgaatcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattatactgaaatatag 38816727  T
Q  115 cgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatagtatatggttaccgttcaattatt 214  Q
    |||||||||||||||||||||||||||||||||||||| |||||||       |||||||||||| ||||||||||||||||||||||||||||||||||    
T  38816728 cgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc-------ggagtccgtattagtgcttcatagtatatggttaccgttcaattatt 38816820  T
Q  215 ctattttctcaaattattgcttcaattcaagcaatgatacaaacaatataccatattacattaattgaattgtaaaacccaactatttttaacctgcagc 314  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816821 ctattttctcaaattattgcttcaattcaaacaatgatacaaacaatataccatattacattaattgaattgtaaaacccaactatttttaacctgcagc 38816920  T
Q  315 gactctctgttg 326  Q
    ||||||||||||    
T  38816921 gactctctgttg 38816932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 19820428 - 19820503
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||| ||||||||||||    
T  19820428 gattttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 19820503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 22013431 - 22013364
Alignment:
Q  124 caaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||    
T  22013431 caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 22013364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 165
Target Start/End: Original strand, 22423764 - 22423895
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtcc-gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattatt 132  Q
    ||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||||| |||  |||||| |||| ||| | |||||||||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtccagacaccgacacgacaccgacatatataattatattgaattat-gtgattttctcaaattatt 22423862  T
Q  133 agcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    ||  ||||| | |||||||| |||||| |||||    
T  22423863 agtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 15410483 - 15410532
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtc 166  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  15410483 attttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 6326332 - 6326384
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    |||||||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  6326332 attttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccgg 6326384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 37328829 - 37328955
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    |||||||||||||||| ||||||||||||  ||||| | |||| | | | ||||||  ||||||||| || ||||||| || |||||||||||| |||||    
T  37328829 tgtccgacaccgacacgacaccgacacatgtaattacactgaatttt-gtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgt 37328927  T
Q  166 ccggagtccgtattcgtgcttcatagta 193  Q
     ||| |||||| | ||||||||||||||    
T  37328928 tcggtgtccgtgtccgtgcttcatagta 37328955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 3966577 - 3966488
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    |||||||||| ||||| |||||||||||||  |||| | |||| | | | ||||||||||||||||||||||||||||| |||||||||||    
T  3966577 tgtccgacactgacacgacaccgacacatataattacactgaattgt-gtgattttctcaaattattagcggtgtcggcatgtcagtgtcc 3966488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 15382500 - 15382442
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||| ||||||||||||| |||||||||||||| |||||||| ||||||||| ||||||    
T  15382500 ttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15382442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 42469245 - 42469171
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||||| | |||||||||||||| | |||||| ||||| ||| |||||| | ||||||||||||    
T  42469245 attttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgtccgtgcttcatag 42469171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 21191090 - 21191143
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    |||||| ||||||||||||| |||||||| |||||||||||||| |||||||||    
T  21191090 gattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccgg 21191143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 2436939 - 2436878
Alignment:
Q  124 caaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||||||||||||||||||||||      ||||||||| |||||||| ||||||||||||    
T  2436939 caaattattagcggtgtcggcgtgtcagtgt------cgtgtccggtgtccgtatccgtgcttcatag 2436878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 155
Target Start/End: Complemental strand, 6035505 - 6035469
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||||||||||||||||||||||||||||||||||    
T  6035505 tttctcaaattattagcggtgtcggcgtgtcagtgtc 6035469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 17123073 - 17123033
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  17123073 gattttctcaaattattagcggtgttggcgtgtcagtgtcc 17123033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 21522766 - 21522722
Alignment:
Q  125 aaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||    
T  21522766 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21522722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 21533332 - 21533288
Alignment:
Q  125 aaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||    
T  21533332 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21533288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 6247647 - 6247572
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||| ||||||||||||  |||||||||||||||||| |||  ||||||||| ||||| || |||| |||||||    
T  6247647 gattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccgcatccgtgtttcatag 6247572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 14674294 - 14674251
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  14674294 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 14674251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 19579726 - 19579683
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  19579726 gattttctcaaattattagctgtgtcggcgtatcagtgtccgtg 19579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 21137713 - 21137654
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||||||| ||||||| || ||||||||||||||||||||||  |||||||| ||||||    
T  21137713 attttctcagattattaccgatgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgt 21137654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 27144488 - 27144449
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  27144488 gatttcctcaaattattagcggtgtcggcgtgtcagtgtc 27144449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 5873548 - 5873590
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  5873548 attttctcaaattattagaggtgtcggcatgtcagtgtccgtg 5873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 11686012 - 11685925
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    ||||||||||||| || |||||||||||||  |||| | | || ||| |||| |||||||||||||||||||||||||| ||||||||||    
T  11686012 tgtccgacaccga-acgacaccgacacatataattacactaaattat-gcgactttctcaaattattagcggtgtcggcatgtcagtgtc 11685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 36642803 - 36642849
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||||    
T  36642803 tcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 36642849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 8420124 - 8420075
Alignment:
Q  34 aactatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    |||||||||||||||| |||||||||||||| |  |||||||||||||||    
T  8420124 aactatgaagcacggatactcctcgaattaggcgcgtccgacaccgacac 8420075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 19552577 - 19552626
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    |||||| ||||||||||| | ||||||||||||||||||||||| |||||    
T  19552577 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 158
Target Start/End: Complemental strand, 39698615 - 39698524
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    |||||||||||||||| |||| ||||| |  ||||| | |||| ||| | |||||| ||||||||||||| ||||| ||||||||||||||||    
T  39698615 tgtccgacaccgacacgacactgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgt 39698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 9929720 - 9929668
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacac 88  Q
    ||||||||||| ||||||||||||||||| | ||||||| |||||||| ||||    
T  9929720 ctatgaagcacagacactcctcgaattagtcgtgtccgataccgacacgacac 9929668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 13287433 - 13287493
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||| ||||||||||| | |||||| ||||| |||||||||| ||||||||| ||||||    
T  13287433 gattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgt 13287493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 41995543 - 41995436
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtcc 167  Q
    ||||||||||||| ||  ||||||||| |||||| | |||| ||| | |||||| || |||||||||  ||||||||||||||||||| ||| ||| |||    
T  41995543 tgtccgacaccgatacggcaccgacacttaattacattgaattat-gtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgtatcc 41995445  T
Q  168 ggagtccgt 176  Q
     | ||||||    
T  41995444 agtgtccgt 41995436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 7175053 - 7175096
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||||||||||||||| ||||||||  |||||||||||||||    
T  7175053 gattttctcaaattattaacggtgtcgatgtgtcagtgtccgtg 7175096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 9449494 - 9449451
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||||||||||||||  |||||||||||| |||||||||||    
T  9449494 gattttctcaaattattattggtgtcggcgtgccagtgtccgtg 9449451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 16203829 - 16203872
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||||||||||||||||| |||||||| ||| ||||||||||    
T  16203829 gattttctcaaattattagcagtgtcggcatgttagtgtccgtg 16203872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 31084348 - 31084309
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  31084348 gattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 16734890 - 16734848
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||    
T  16734890 attttcttaaattattaacggtgtcggcgtgttagtgtccgtg 16734848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 24906250 - 24906280
Alignment:
Q  34 aactatgaagcacggacactcctcgaattag 64  Q
    |||||||||||||||||||||||||||||||    
T  24906250 aactatgaagcacggacactcctcgaattag 24906280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 26312794 - 26312732
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtat 178  Q
    ||||||||||||||||| ||||| ||||| | ||||||||| || ||||||| | ||||||||    
T  26312794 gattttctcaaattatttgcggtatcggcatatcagtgtccatgtcgtgtccagtgtccgtat 26312732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 147
Target Start/End: Complemental strand, 27932259 - 27932229
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtg 147  Q
    |||||||||||||||||||||||||||||||    
T  27932259 attttctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 28588708 - 28588742
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtca 150  Q
    |||||||||||||||||| ||||||||||||||||    
T  28588708 gattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 19737517 - 19737558
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    ||||||||||||||||| |||| || ||||||||||||||||    
T  19737517 attttctcaaattattatcggtttcagcgtgtcagtgtccgt 19737558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 26716169 - 26716097
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcat 189  Q
    |||||||||||||||||||| |||||||| ||||| ||||  || ||||||| | ||||||||  |||||||||    
T  26716169 gattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtcc-gtgtccgtatcggtgcttcat 26716097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 26985909 - 26985837
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcat 189  Q
    |||||||||||||||||||| |||||||| ||||| ||||  || ||||||| | ||||||||  |||||||||    
T  26985909 gattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtcc-gtgtccgtatcggtgcttcat 26985837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 30098351 - 30098310
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccg 157  Q
    |||||||||||||||||| |||| ||| ||||||||||||||    
T  30098351 gattttctcaaattattaacggtttcgtcgtgtcagtgtccg 30098310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 143
Target Start/End: Original strand, 32766975 - 32767004
Alignment:
Q  114 gcgattttctcaaattattagcggtgtcgg 143  Q
    ||||||||||||||||||||||||||||||    
T  32766975 gcgattttctcaaattattagcggtgtcgg 32767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 24906336 - 24906388
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    ||||| ||||||||||| | |||| ||||||||||||| |||| |||||||||    
T  24906336 attttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtccgg 24906388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 6e-25; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 27945065 - 27944991
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||    
T  27945065 attttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 24105702 - 24105629
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| |||||||| | ||||||| ||||||||||||    
T  24105702 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgta-tccgtatccgtgcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 11722132 - 11722185
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  11722132 gattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccgg 11722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 178
Target Start/End: Complemental strand, 24339716 - 24339605
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||||||||||| |||||||||||||| ||||| || |||||    
T  24339716 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgt 24339618  T
Q  166 ccggagtccgtat 178  Q
    |||| ||||||||    
T  24339617 ccggtgtccgtat 24339605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 29787354 - 29787446
Alignment:
Q  66 catgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||| |||||||||  ||||| ||||||||||| | |||| ||| | ||||||||||||||||||||||||||||||||| | ||||||||    
T  29787354 catgtccaacaccgacattacaccaacacataattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgttaatgtccgtg 29787446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 166
Target Start/End: Complemental strand, 19206107 - 19206025
Alignment:
Q  85 acaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtc 166  Q
    |||||||||||||  ||||||||||| ||| | |||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  19206107 acaccgacacatataattataatgaattat-gtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 32308194 - 32308105
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    ||||| |||||||||| |||| ||||||||  |||| | |||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  32308194 tgtccaacaccgacacgacactgacacatacaattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgtcagtgtcc 32308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 1433479 - 1433419
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||||||||||||||| |||||||||||||||| |||||||| ||||| ||| ||||||    
T  1433479 gattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgt 1433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 196
Target Start/End: Original strand, 7328639 - 7328805
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacacc-----gacaccacaccgacacata--attataatgaaatatagcgattttctcaaat 128  Q
    |||||||||||| |||||| ||| ||||| | |||||||||||     ||||| |||||||||||||  |||| | | || ||| |  ||||||||||||    
T  7328639 ctatgaagcacgaacactcatcggattaggcgtgtccgacaccaacacgacacgacaccgacacatataattacactaaattat-gttattttctcaaat 7328737  T
Q  129 tattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatagtatat 196  Q
    ||||||| || ||| ||||| | |||| ||| ||||| ||| |||||||| |||||||||||||||||    
T  7328738 tattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtatccgtgcttcatagtatat 7328805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 43027503 - 43027578
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||| ||||||||||||| | |||| |||||||||||||||| ||||||| | ||||| || ||||||||||||    
T  43027503 gattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccgcatccgtgcttcatag 43027578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 43250017 - 43249958
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||||||| | ||||||||||||||||||||||| | ||||||| ||||||    
T  43250017 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgt 43249958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 23191921 - 23191879
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  23191921 gattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 26733329 - 26733279
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtc 166  Q
    |||||| |||||||||||||||||||| |||||||||||||||| ||||||    
T  26733329 gattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 11700909 - 11700798
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgt--ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattatta 133  Q
    ||||||| || |||||||||||| ||||||| |||  |||||||||| || |||| |||||||||||| | |||| ||| | |||||| |||||||||||    
T  11700909 ctatgaatcagggacactcctcggattagccgtgtgtccgacaccgagacaacacagacacataattacattgaattat-gtgattttgtcaaattatta 11700811  T
Q  134 gcggtgtcggcgt 146  Q
     ||||||| ||||    
T  11700810 acggtgtcagcgt 11700798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 22484082 - 22484011
Alignment:
Q  85 acaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||||||||||  |||||| |||| ||| || ||||||| |||||||||||||||||||||||||||||||    
T  22484082 acaccgacacatataattatactgaattat-gcaattttctaaaattattagcggtgtcggcgtgtcagtgtc 22484011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 49107844 - 49107795
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtcc 167  Q
    |||||||||||||||||||||||||| ||||||| ||||||| |||||||    
T  49107844 ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 11072362 - 11072280
Alignment:
Q  76 accgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||||| ||||||||||||||||||| |||| ||||    |||| ||||||||||| ||||||||||||||| |||| ||||    
T  11072362 accgacacgacaccgacacataattatattgaattata-tatttttttcaaattattatcggtgtcggcgtgtctgtgttcgtg 11072280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 21828439 - 21828482
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||||||||||| || |||||||||||||||||||||||||    
T  21828439 gattttctcaaattactaacggtgtcggcgtgtcagtgtccgtg 21828482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 30731104 - 30731002
Alignment:
Q  73 gacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagt 172  Q
    |||||| |||| ||||||||||| ||||| | |||| ||| | ||||||||||||||||| |||||||||||||| || |||  ||| |||||| || ||    
T  30731104 gacaccaacacgacaccgacacacaattacactgaattat-gtgattttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgtctggtgt 30731006  T
Q  173 ccgt 176  Q
    ||||    
T  30731005 ccgt 30731002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 598233 - 598160
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcata 190  Q
    |||||||| ||||||||||||||||||  ||||||||||||||| | |||| || ||||||  ||||||||||||    
T  598233 gattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtccgt-gtcgtgcttcata 598160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 5236010 - 5235960
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtcc 167  Q
    ||||||| |||||||||||||||||| |||||||||||| ||| |||||||    
T  5236010 attttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtcc 5235960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 6630897 - 6630985
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    ||||||||||| |||| ||| |||||||||  |||| | |||| || || || |||||||||||||||| ||||||||||||||||||||    
T  6630897 tgtccgacaccaacacgacatcgacacatataattacactgaatta-agtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 20549816 - 20549778
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgt 154  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  20549816 gattttctcaaattattagcggtgtcggtgtgtcagtgt 20549778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 26329418 - 26329476
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||||||||||||| || |||||||||||||||||| ||| ||||||| | ||||||    
T  26329418 ttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgt 26329476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 4017830 - 4017879
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtcc 167  Q
    |||||||||||||||| | ||||||||||||| ||||||||| |||||||    
T  4017830 ttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtcc 4017879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 11061110 - 11061162
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||| ||| ||||    
T  11061110 gattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccg 11061162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 22868067 - 22868015
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||||||||| |||||||| |||||||||||||||||||| |||  |||||||    
T  22868067 gattttctcatattattagtggtgtcggcgtgtcagtgtcggtgttgtgtccg 22868015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 155
Target Start/End: Complemental strand, 25791675 - 25791639
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||||||| ||||||||||||||||||||||||||    
T  25791675 tttctcaaataattagcggtgtcggcgtgtcagtgtc 25791639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 2034462 - 2034392
Alignment:
Q  120 ttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||| ||||||| ||||| ||| |||||| |||||| | | ||||||| ||||||||||||    
T  2034462 ttctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtcagta-tccgtatccgtgcttcatag 2034392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 2425767 - 2425818
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtcc 167  Q
    |||||||||||||||||| ||||| |||||||||||| || ||| |||||||    
T  2425767 gattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtcc 2425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 168
Target Start/End: Complemental strand, 13770707 - 13770664
Alignment:
Q  125 aaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||    
T  13770707 aaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 13770664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 15902896 - 15902795
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    ||||||| |||||||| |||||||||||||  |||| | | || ||| | |||||| |||||||||||  ||||||||| |||||||||| ||| |||||    
T  15902896 tgtccgataccgacacaacaccgacacatataattacactaaattat-gtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgt 15902798  T
Q  166 ccg 168  Q
    |||    
T  15902797 ccg 15902795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 148
Target Start/End: Complemental strand, 28155594 - 28155563
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgt 148  Q
    ||||||||||||||||||||||||||||||||    
T  28155594 attttctcaaattattagcggtgtcggcgtgt 28155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 8046061 - 8046103
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||    
T  8046061 gattttctcaaattattagtggtgttggcgtgtcagtatccgt 8046103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 9482959 - 9482917
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    |||||||||||||||| |||| |||||| ||||||||||||||    
T  9482959 gattttctcaaattatcagcgatgtcggtgtgtcagtgtccgt 9482917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 9933347 - 9933282
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattag 134  Q
    |||||||||||||||| |||| ||||||||| | || |||||||| | |||||| ||||||||||||    
T  9933347 tgtccgacaccgacacgacactgacacataagtttactgaaatat-gtgattttttcaaattattag 9933282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 40132023 - 40132069
Alignment:
Q  145 gtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||||||||||||| |||| ||| ||| ||||||||    
T  40132023 gtgtcagtgtccgtgccgtgtccggtgtccatatccgtacttcatag 40132069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 1401047 - 1401006
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtgtccgtgc 160  Q
    |||||||||||||||||| | || ||||||||||||||||||    
T  1401047 tttctcaaattattagcgatatcagcgtgtcagtgtccgtgc 1401006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 64
Target Start/End: Complemental strand, 17852120 - 17852091
Alignment:
Q  35 actatgaagcacggacactcctcgaattag 64  Q
    ||||||||||||||||||||||||||||||    
T  17852120 actatgaagcacggacactcctcgaattag 17852091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 21864829 - 21864756
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||| ||||||||||||| ||||| | ||||| ||||||||| ||||||||  ||  |||| ||||||||||||    
T  21864829 ttttttcaaattattagctgtgtccgtgtgtccgtgtccgtgtcgtgtccgatgtgtgtatccgtgcttcatag 21864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 2948708 - 2948672
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  2948708 gattttctaaaattatcagcggtgtcggcgtgtcagt 2948672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 10042955 - 10042919
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  10042955 tcaaattattagtggtgtcggcgtgtaagtgtccgtg 10042919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 12010022 - 12010058
Alignment:
Q  124 caaattattagcggtgtcggcgtgtcagtgtccgtgc 160  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  12010022 caaattattagctgtgtcagcgtgtcagtgtccgtgc 12010058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 15680928 - 15680900
Alignment:
Q  36 ctatgaagcacggacactcctcgaattag 64  Q
    |||||||||||||||||||||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattag 15680900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 24289844 - 24289803
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgc 160  Q
    |||||||||||||||| |||||||||||||||  ||||||||||    
T  24289844 attttctcaaattattggcggtgtcggcgtgt--gtgtccgtgc 24289803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 25481927 - 25481887
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    |||||| ||||||||||||| |||||||||||||| |||||    
T  25481927 gattttttcaaattattagctgtgtcggcgtgtcattgtcc 25481887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 33994214 - 33994162
Alignment:
Q  139 gtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||||||| |||| ||||||  | |||||||| ||||||||||||    
T  33994214 gtcggcgtgtcagtgttcgtgtcgtgtcaagtgtccgtatccgtgcttcatag 33994162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 22652050 - 22651948
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| ||| | |||||| ||||||||||||| ||||||||||||||||||||||| |||||    
T  22652050 tgtccgacaccgacacgacaccgacacttgtaattatattgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 22651952  T
Q  166 ccgg 169  Q
    ||||    
T  22651951 ccgg 22651948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 29510289 - 29510396
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| | | | |||||| ||||||||||||| ||||||||||||||||||||||| |||||    
T  29510289 tgtccgacaccgacactacaccgacacttgtaattatactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 29510387  T
Q  166 ccggagtcc 174  Q
    |||| ||||    
T  29510388 ccggtgtcc 29510396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 25192388 - 25192456
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||  |||||||||||||||||||||    
T  25192388 tcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtattcgtgcttcatag 25192456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 926822 - 926888
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgt 182  Q
    |||||||||||||||||||  |||| |||||||||||||||||| ||||||||| |||||| |||||    
T  926822 gattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 926888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 13436998 - 13437073
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||| ||||||||||||| |||||||||||||||||||| || | ||||||| |||| | | ||||||||||||    
T  13436998 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatgtccgtgcttcatag 13437073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 31109552 - 31109595
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  31109552 gattttctcaaattattaacggtgtcggcgtgtcagtgtccgtg 31109595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 24362236 - 24362298
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtat 178  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||| ||| ||||| ||||||||    
T  24362236 gattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtat 24362298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 37283812 - 37283887
Alignment:
Q  83 ccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||||||||||||||| | |||| ||| | |||||||||| ||||||||||||| | || ||||||||||||||    
T  37283812 ccacaccgacacataattacactgaattat-gtgattttctcagattattagcggtgcccgcatgtcagtgtccgtg 37283887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 39954313 - 39954352
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  39954313 gattttctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 4673459 - 4673521
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtat 178  Q
    |||||| ||||||||||| | ||||||||||||||||||| ||| ||||||||  ||||||||    
T  4673459 gattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtat 4673521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 34897110 - 34897068
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  34897110 gattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 158
Target Start/End: Original strand, 15816114 - 15816205
Alignment:
Q  68 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    ||||||||||| |||| ||||||||||  ||||||| | | || ||| | |||||| ||||||||||||  ||||||||||||||||||||||    
T  15816114 tgtccgacaccaacacgacaccgacacttataattacactaaattat-gtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 27213572 - 27213519
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    |||||||| ||||||||||| ||||||||||||| || |||||| |||||||||    
T  27213572 gattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccgg 27213519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 126390 - 126457
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||||||||| ||||||||||| |||||  ||||||| | || ||||| ||||||||||||    
T  126390 tcaaattattagcggtgttggcgtgtcagtatccgtatcgtgtcc-gtgtgcgtatccgtgcttcatag 126457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 20873094 - 20873042
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||||| ||||||||||| |  |||||||||||||||||||||| ||||||||    
T  20873094 gattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccg 20873042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 27101540 - 27101500
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    |||||| |||||||||||||||||||||||||||| |||||    
T  27101540 gattttttcaaattattagcggtgtcggcgtgtcaatgtcc 27101500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 164
Target Start/End: Complemental strand, 29776108 - 29776013
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtg 164  Q
    |||||||||| |||   ||||||||| ||||||||| |||| ||  | |||||||||||||||||||| |||||| | ||||| |||||||| ||||    
T  29776108 tgtccgacactgacttaacaccgacatataattatactgaattac-gtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtg 29776013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 13844630 - 13844669
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  13844630 gattttctcaaattattagcagtgtcggcgtgtccgtgtc 13844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 24669457 - 24669406
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||| |||||||||||| ||||||| ||||||||||||| ||| ||||||||    
T  24669457 atttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgtccg 24669406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 31557015 - 31556948
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcata 190  Q
    ||||||||||| | ||||||||||||||||| || || | ||||||| |||||||| ||| |||||||    
T  31557015 tcaaattattaactgtgtcggcgtgtcagtgaccatgtcatgtccggtgtccgtatccgtacttcata 31556948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 36450788 - 36450831
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||| ||||||||||||  |||||||||||||||||||||||    
T  36450788 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtg 36450831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 40332197 - 40332154
Alignment:
Q  149 cagtgtccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    ||||||||||| ||||||||| |||||||| |||||||||||||    
T  40332197 cagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatagt 40332154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 44067540 - 44067481
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||||||| | ||||||||||||||||||| |||  ||||| || ||||||    
T  44067540 attttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtctggtgtccgt 44067481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 17751699 - 17751657
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||| |||||| || |||||||||||||||||||||||||    
T  17751699 attttctgaaattactaccggtgtcggcgtgtcagtgtccgtg 17751657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 17760686 - 17760644
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||| |||||| || |||||||||||||||||||||||||    
T  17760686 attttctgaaattactaccggtgtcggcgtgtcagtgtccgtg 17760644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 156
Target Start/End: Original strand, 26714120 - 26714158
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  26714120 ttttctcacattattagcggtgtcggcgtgttagtgtcc 26714158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 36934715 - 36934646
Alignment:
Q  95 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    ||||||| |||||| ||| | |||||| || ||||||||||||||||| ||||| |||||||||| |||||    
T  36934715 ataattacaatgaattat-gtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgt 36934646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 22197783 - 22197836
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||| |||| ||||||| |||||| ||| ||||||||| ||||||    
T  22197783 tcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtccgt 22197836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 30271325 - 30271366
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccg 157  Q
    |||||| |||||| |||||| |||||||||||||||||||||    
T  30271325 gattttttcaaatgattagctgtgtcggcgtgtcagtgtccg 30271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 149
Target Start/End: Original strand, 31236611 - 31236644
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtc 149  Q
    |||||||||||||||||||| |||||||||||||    
T  31236611 gattttctcaaattattagcagtgtcggcgtgtc 31236644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 28642426 - 28642358
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||| | |||||   |||||| |||||||| ||||||||  |||||||| ||||||||||||    
T  28642426 tcaaattattaaccgtgtcaatgtgtcattgtccgtgtcgtgtccgatgtccgtatccgtgcttcatag 28642358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 9027203 - 9027143
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9027203 gattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgt 9027143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 10294181 - 10294079
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    ||||||||||| |||| |||||||||||||  |||| | |||||||| |||||| |||||||||||||||||| ||||| ||||||| |||||| |||||    
T  10294181 tgtccgacaccaacacgacaccgacacatataattacattgaaatat-gcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgt 10294083  T
Q  166 ccgg 169  Q
    ||||    
T  10294082 ccgg 10294079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 16766771 - 16766662
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||||||||||| |||||||||||||||||||| || |||||    
T  16766771 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgt 16766673  T
Q  166 ccggagtccgt 176  Q
    |||| ||||||    
T  16766672 ccggtgtccgt 16766662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 176
Target Start/End: Original strand, 5732474 - 5732604
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagc 135  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||         | ||||||| | | |||||| | |||||||||||||||||| |    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac---------atataattacactaaaatat-gtgattttctcaaattattaac 5732563  T
Q  136 ggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||||||||||| || ||||||| | ||||||    
T  5732564 ggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgt 5732604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 8365560 - 8365628
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||  ||||||||||||||||||||||| |||||| || |||||||| ||||||||||||    
T  8365560 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccgtgcttcatag 8365628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 12696348 - 12696277
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcat 189  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| ||||||| | |||||||| ||||||||||    
T  12696348 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc-gtgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 166
Target Start/End: Original strand, 8805524 - 8805656
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgaca---ccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattatt 132  Q
    ||||||||||||||||||||||| ||||| ||||||| ||    | ||||| ||||||||||||||||| | | || ||| | |||||||||||||||||    
T  8805524 ctatgaagcacggacactcctcggattaggcatgtcccacgtgtctgacactacaccgacacataattacactaaattat-gtgattttctcaaattatt 8805622  T
Q  133 agcggtgtcggcgtgtcagtgtccgtgccgtgtc 166  Q
    ||| ||| || |||||| ||||| ||| ||||||    
T  8805623 agcagtgccgacgtgtcggtgtctgtgtcgtgtc 8805656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 9107355 - 9107464
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| | | | |||||| ||||||||||||| |||||||||||| |||||||||| |||||    
T  9107355 tgtccgacaccgacacgacaccgacacttgtaattacactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgt 9107453  T
Q  166 ccggagtccgt 176  Q
    |||| ||||||    
T  9107454 ccggtgtccgt 9107464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 30866178 - 30866253
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||||||||||||| || ||||| ||||| ||| | ||||||| |||||||||||| ||||||||    
T  30866178 gattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtattcgtacttcatag 30866253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 6389767 - 6389693
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||||| | |||||||||||| |||||||||| ||||||||| ||| || | ||||||||||||    
T  6389767 attttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgtgcttcatag 6389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 9658904 - 9658854
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtc 166  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  9658904 gattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 3398637 - 3398569
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| ||  |||||||| | ||||||||||    
T  3398637 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatccatgcttcatag 3398569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 7938141 - 7938081
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||| ||||||||||||| |||||||||||||||||||| || ||||||||| ||||||    
T  7938141 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgt 7938081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 13851760 - 13851712
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  13851760 attttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 853893 - 853968
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||| ||||||||||||  |||||||||||||||  |||||| ||||||||| |||||||| |||| |||||||    
T  853893 gattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatccgtgattcatag 853968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 20371144 - 20371187
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  20371144 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtg 20371187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 34073337 - 34073441
Alignment:
Q  73 gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgga 170  Q
    ||||||||||| |||||||| ||||  |||| | |||| ||| | ||||||||||||||||||||| ||| ||| |||||||||||||| ||||||| |     
T  34073337 gacaccgacacgacaccgacccatataattacactgaattat-gagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagt 34073435  T
Q  171 gtccgt 176  Q
    ||||||    
T  34073436 gtccgt 34073441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 426548 - 426601
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    |||||| ||||||||||| | ||||||||||||||||||||||| |||||||||    
T  426548 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 426601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 7265627 - 7265668
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccg 157  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  7265627 gattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 5000660 - 5000720
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||||||| ||||||||||||||||| ||||||||| |||||| | ||||||| ||||||    
T  5000660 gattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgt 5000720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 7723199 - 7723323
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgt--ccg--acaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaatt 129  Q
    ||||||||||||||||||||||| ||||| | |||  |||  |||||||||| ||||||| |||||  |||||  |||| ||||  ||||||||||||||    
T  7723199 ctatgaagcacggacactcctcggattaggcgtgtttccgtaacaccgacacgacaccgatacatataattatgctgaattatat-gattttctcaaatt 7723297  T
Q  130 attagcggtgtcggcgtgtcagtgtc 155  Q
    |||||| |||||  ||||||||||||    
T  7723298 attagcagtgtccacgtgtcagtgtc 7723323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 8777007 - 8777059
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||||| ||||||||||||  ||||||||||||||||||||||| ||||||||    
T  8777007 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8777059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 19040377 - 19040341
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    |||||||||||||||||||||||||||||||||||||    
T  19040377 gattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 34595159 - 34595099
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||| ||||||||||||  |||||||||||||| |||||||| ||||||||| ||||||    
T  34595159 gattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 34595099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 9629408 - 9629357
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtcc 167  Q
    ||||||||||||||||| ||||||||||||||||| | |||||| |||||||    
T  9629408 gattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcc 9629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 17841623 - 17841666
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  17841623 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 17841666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 31579229 - 31579311
Alignment:
Q  85 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    ||||||||||||||||| | |||| ||| | |||||||||||||||||| |||||| || ||| |||||||| || ||||||||    
T  31579229 acaccgacacataattacactgaattat-gtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtccg 31579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 31959184 - 31959111
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcata 190  Q
    |||||| ||||||||||||| ||| |||||||||||||| |||| | ||||| | |||||||| |||||||||||    
T  31959184 gattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtcatgtcc-gtgtccgtatccgtgcttcata 31959111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 26562759 - 26562664
Alignment:
Q  72 cgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtc 166  Q
    |||||||||||| ||| |||||||||  |||| | |||| ||| | |||||||||||||| ||||| ||||||||||||| |||| ||||| |||||    
T  26562759 cgacaccgacacgacatcgacacatataattacactgaattat-gtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtgcggtgtc 26562664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 7930330 - 7930254
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    |||||| |||||||||||   |||||||| ||||||||||||| | |||||||| ||| |||| | |||||||||||    
T  7930330 gattttttcaaattattaattgtgtcggcatgtcagtgtccgttctgtgtccggtgtctgtatccatgcttcatagt 7930254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 7996412 - 7996452
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  7996412 gattttctcaaattattagcagtgtcggcatgtcagtgtcc 7996452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 8022389 - 8022349
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  8022389 gattttctcaaattattagcagtgtcggcatgtcagtgtcc 8022349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 16833333 - 16833281
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||||| ||||||||||||  ||||||||||||||||||| ||| ||||||||    
T  16833333 gattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccg 16833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 17341698 - 17341746
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtg 164  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||| ||||    
T  17341698 gattttatcaaattattaacggtgtcggcgtgtcagtgcccgtgtcgtg 17341746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 426478 - 426525
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtccgacaccgacac 426525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 677862 - 677823
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  677862 gattttctcaaattattaacagtgtcggcgtgtcagtgtc 677823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 7977865 - 7977924
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||| ||||||||||||| |||||||||||||||| ||| || ||||||| | ||||||    
T  7977865 attttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgt 7977924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 10339160 - 10339211
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtcc 167  Q
    ||||||||||||||| | ||||||||||||||||||||| | || |||||||    
T  10339160 gattttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgtcc 10339211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 10760876 - 10760919
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgc 160  Q
    ||||||||||||||||| | |||||| |||||||||||||||||    
T  10760876 attttctcaaattattatcagtgtcgacgtgtcagtgtccgtgc 10760919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 10842557 - 10842518
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  10842557 gattttttcaaattattagcggtgtcggcgtgtccgtgtc 10842518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 156
Target Start/End: Original strand, 21395342 - 21395381
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  21395342 attttctcaaattattagcggtgttggcgtgtcggtgtcc 21395381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 3209404 - 3209347
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||| ||||||||||||| ||||||||||||| |||| |||| ||||||||| ||||||    
T  3209404 ttttttcaaattattagctgtgtcggcgtgtctgtgt-cgtgtcgtgtccggtgtccgt 3209347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 10649352 - 10649278
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||| |||||||| || |||||||||||| ||| |||  ||| ||| ||||| |||||||| ||||||||||||    
T  10649352 attttatcaaattactaacggtgtcggcgtatcattgtttgtgtcgtatccggtgtccgtatccgtgcttcatag 10649278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 19147437 - 19147479
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    |||||||||||||||||||| ||||| | ||||||||||||||    
T  19147437 gattttctcaaattattagctgtgtccgtgtgtcagtgtccgt 19147479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 20518369 - 20518295
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||| |||| |||||  | ||||||||||| ||| ||| |||||  ||||||| ||||||||||||    
T  20518369 attttctcaaattgttagtggtgttagtgtgtcagtgtctgtgtcgtatccggcatccgtatccgtgcttcatag 20518295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 34073276 - 34073306
Alignment:
Q  34 aactatgaagcacggacactcctcgaattag 64  Q
    |||||||||||||||||||||||||||||||    
T  34073276 aactatgaagcacggacactcctcgaattag 34073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 154
Target Start/End: Original strand, 34290064 - 34290149
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgt 154  Q
    |||| ||||| ||||| ||||||||||||||||| | |||| ||| | |||| || |||||||||||  |||||||| |||||||||    
T  34290064 tgtcggacactgacacgacaccgacacataattacactgaattat-gtgattctcgcaaattattagttgtgtcggcatgtcagtgt 34290149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 2117175 - 2117134
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacac 77  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  2117175 ctatgaagcacggacactcctccgattaggcatgtccgacac 2117134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 159
Target Start/End: Original strand, 24809527 - 24809568
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||| |||||||||||||| ||||||||| ||||||||||||    
T  24809527 ttttttcaaattattagcgatgtcggcgtatcagtgtccgtg 24809568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 10770708 - 10770760
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||||| ||||||||||||  |||| ||||||||||||||| || ||||||||    
T  10770708 gattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtccg 10770760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 12868709 - 12868784
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtc-cgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||| ||||||||||| | |||||||||||||||||||  || | |||||| |||||||||| | ||||||||||    
T  12868709 gattttttcaaattattaactgtgtcggcgtgtcagtgtcgtgtccggtgtcc-gagtccgtatccctgcttcatag 12868784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 18803549 - 18803597
Alignment:
Q  120 ttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    ||||| ||||||||||||||||||| |||||||||  ||| ||||||||    
T  18803549 ttctcgaattattagcggtgtcggcatgtcagtgtttgtgtcgtgtccg 18803597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 19044485 - 19044449
Alignment:
Q  120 ttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    |||||||||||||||  ||||||||||||||||||||    
T  19044485 ttctcaaattattagtcgtgtcggcgtgtcagtgtcc 19044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 21424836 - 21424872
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    |||||| |||||||||||||||||| |||||||||||    
T  21424836 gattttttcaaattattagcggtgttggcgtgtcagt 21424872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 28152117 - 28152081
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||||||||||  ||||||||||||||||||||||    
T  28152117 tcaaattattagctttgtcggcgtgtcagtgtccgtg 28152081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 33001323 - 33001375
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||||| ||||||||||||| |||||||||||||| || |||||  |||||||    
T  33001323 gattttttcaaattattagcagtgtcggcgtgtcattgaccgtgttgtgtccg 33001375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 8e-21; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 80 - 191
Target Start/End: Original strand, 21782817 - 21782927
Alignment:
Q  80 acaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtatt 179  Q
    |||| |||||| |||||||||| | |||| ||| | |||||||||||||||||||| ||||||||||||||||||  ||| ||||||| | ||| |||||    
T  21782817 acacgacaccggcacataattacactgaattat-gtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtatt 21782915  T
Q  180 cgtgcttcatag 191  Q
    ||||||||||||    
T  21782916 cgtgcttcatag 21782927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 20539708 - 20539783
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||| ||||||||||||| |||||| |||||||||||||||| ||||||| | |||||||| ||||||||||||    
T  20539708 gattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccgtgcttcatag 20539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 21616787 - 21616737
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtc 166  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  21616787 gattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 19536434 - 19536507
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||| ||||||||||||  |||||||||||||| |||||||| ||||||||| ||||||||  |||||||||||    
T  19536434 ttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 19536507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 23718048 - 23717976
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    ||||||||||||||||||||||||| ||||||||||||||| | ||||| | ||| |||| |||||||||||||    
T  23718048 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 23717976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 24105720 - 24105648
Alignment:
Q  119 tttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    ||||||||||||||||||||||||| ||||||||||||||| | ||||| | ||| |||| |||||||||||||    
T  24105720 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 24105648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 33519800 - 33519736
Alignment:
Q  127 attattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||||| |||||||| |||| | ||||||||| |||||||| ||||||||||||    
T  33519800 attattagcggtgtcggtgtgtcagtatccgcgtcgtgtccggtgtccgtatccgtgcttcatag 33519736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 18276570 - 18276486
Alignment:
Q  91 acacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||||||||| | |||| || || ||||||||||||||||||||||||||||| | |||||||| ||  ||||||||| ||||||    
T  18276570 acacataattacactgaatta-agtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgt 18276486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 21624282 - 21624217
Alignment:
Q  125 aaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcata 190  Q
    ||||||||||| ||||||||||||||||||| ||| ||||| ||| |||||||| || ||||||||    
T  21624282 aaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatccgggcttcata 21624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 4332981 - 4332891
Alignment:
Q  85 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||||||| | |||| ||| | ||||||| |||||||||| | |||||||| ||| ||| || ||||||||||||| ||||||    
T  4332981 acaccgacacataattacattgaattat-gtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgtccggtgtccgt 4332891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 38117193 - 38117261
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcata 190  Q
    |||||| ||||||||||||| ||||||||||||||||||      ||||||||| |||||||| |||||||||||    
T  38117193 gattttttcaaattattagctgtgtcggcgtgtcagtgt------cgtgtccggtgtccgtatccgtgcttcata 38117261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 143
Target Start/End: Complemental strand, 1328033 - 1327976
Alignment:
Q  85 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcgg 143  Q
    ||||||||||||||||||| |||| | ||  ||||||||||||||||||||||||||||    
T  1328033 acaccgacacataattatactgaattttat-gattttctcaaattattagcggtgtcgg 1327976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 14996260 - 14996333
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    |||| ||||||||||||| |||||||| |||||||||||||| | ||| | | |||||||| |||||||||||||    
T  14996260 ttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgt-ctgcgtccgtatccgtgcttcatagt 14996333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 21374734 - 21374810
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtg--ccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||  | |||||| | |||||||| |||||||||||||    
T  21374734 attttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtcc-gtgtccgtatccgtgcttcatagt 21374810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 28412404 - 28412315
Alignment:
Q  86 caccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||||||||||||| | |||| ||| | |||||| ||||||||||| |||||| | ||||| |||||||||| |||||| || ||||||    
T  28412404 caccgacacataattacactgaattat-gtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgt 28412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 31018615 - 31018557
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtcc 174  Q
    |||||||| |||||||||||||||| ||||||||||||||| || ||| ||||| ||||    
T  31018615 gattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgtatccggtgtcc 31018557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 192
Target Start/End: Complemental strand, 2331863 - 2331743
Alignment:
Q  71 ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgga 170  Q
    ||||||| ||||| |||||||||||||| || | |||| ||| | ||||||||||||||||||  |||||  |||||||| |||||||| || || ||      
T  2331863 ccgacactgacacgacaccgacacataaatacactgaattat-gtgattttctcaaattattaatggtgtttgcgtgtcaatgtccgtgtcgcgttcgat 2331765  T
Q  171 gtccgtattcgtgcttcatagt 192  Q
    ||| || | |||||||||||||    
T  2331764 gtctgtgtccgtgcttcatagt 2331743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 4142875 - 4142936
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtat 178  Q
    ||||||| ||||| |||| |||||||||||||||||||||| | ||||| ||| ||||||||    
T  4142875 attttcttaaattgttagtggtgtcggcgtgtcagtgtccgggtcgtgttcggtgtccgtat 4142936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 19574078 - 19573962
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagc 135  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||  ||||     ||||||| | |||| ||| |  ||||||| ||||||||| |    
T  19574078 ctatgaagcatggacactcctcgaattaggtgtgtccgacaccgacacgccacc----tataattacactgaattat-gttattttcttaaattattatc 19573984  T
Q  136 ggtgtcggcgtgtcagtgtccgt 158  Q
    |||||||||||||| ||||||||    
T  19573983 ggtgtcggcgtgtc-gtgtccgt 19573962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 21091747 - 21091706
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    ||||||| ||||||||||||||||||| ||||||||||||||    
T  21091747 attttcttaaattattagcggtgtcggtgtgtcagtgtccgt 21091706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 30404884 - 30404936
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||||| ||||||||||| | ||||||||||||||||||||||| | ||||||    
T  30404884 gattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccg 30404936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 31284073 - 31284013
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||   ||||||| ||||||    
T  31284073 gattttctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtccgt 31284013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 44860394 - 44860320
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtc 141  Q
    ||||| ||||| |||| |||||||||||||  |||| | |||| ||| ||||||||||||||||||||||||||||    
T  44860394 tgtccaacaccaacacgacaccgacacatataattacactgaattat-gcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 896236 - 896180
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtcc 174  Q
    |||||||||||| ||||||| ||||||||||||||||||  ||| ||||||||| ||||    
T  896236 gattttctcaaactattagcagtgtcggcgtgtcagtgt--gtgtcgtgtccggtgtcc 896180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 16069288 - 16069331
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||| | ||||||||| |||||||||||||||||||||||||    
T  16069288 gatttttttaaattattaacggtgtcggcgtgtcagtgtccgtg 16069331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 19536361 - 19536408
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac 19536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 24894414 - 24894371
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||| | ||||||||||| |||||||||||||||||||||||    
T  24894414 gatttttttaaattattagctgtgtcggcgtgtcagtgtccgtg 24894371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 151
Target Start/End: Original strand, 37411278 - 37411313
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcag 151  Q
    ||||||||||||||||||||||||||||| ||||||    
T  37411278 gattttctcaaattattagcggtgtcggcatgtcag 37411313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 159
Target Start/End: Complemental strand, 37558994 - 37558959
Alignment:
Q  124 caaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||||||||| |||||||||||||||||||||||    
T  37558994 caaattattagctgtgtcggcgtgtcagtgtccgtg 37558959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 2423894 - 2423820
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcata 190  Q
    |||||||||||||| ||||||  ||||||||||| | |||| |  |||||| || |||||||| |||||||||||    
T  2423894 gattttctcaaatttttagcgtcgtcggcgtgtccgcgtccttatcgtgtctggtgtccgtatccgtgcttcata 2423820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 159
Target Start/End: Complemental strand, 6940271 - 6940237
Alignment:
Q  125 aaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||||||| |||||||||||||||||||||||    
T  6940271 aaattattagctgtgtcggcgtgtcagtgtccgtg 6940237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 155
Target Start/End: Original strand, 12464884 - 12464922
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  12464884 attttctcaaattattattggtgtcggcgtgtcagtgtc 12464922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 18255945 - 18255991
Alignment:
Q  37 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    |||||||||||||||||||| | ||||| | ||||||||||||||||    
T  18255945 tatgaagcacggacactccttggattaggcgtgtccgacaccgacac 18255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 23354687 - 23354753
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtg 183  Q
    ||||||||||||||||| | ||||| || |||| ||||||||| | ||||||| |||||| ||||||    
T  23354687 attttctcaaattattatctgtgtcagcatgtcggtgtccgtgtcatgtccggtgtccgtgttcgtg 23354753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 27084287 - 27084245
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||    
T  27084287 gattttctcaaattattagcagtgtcggagtgtccgtgtccgt 27084245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 156
Target Start/End: Complemental strand, 27460049 - 27460011
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  27460049 ttttttcaaattattagctgtgtcggcgtgtcagtgtcc 27460011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 34691770 - 34691816
Alignment:
Q  37 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34691770 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34691816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 34714182 - 34714228
Alignment:
Q  37 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 83  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34714182 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34714228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 36409614 - 36409711
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtc 166  Q
    |||| |||||| |||  ||||||||||||||||| | | || ||| | |||||| ||||||||| |||||||||||| ||| ||| |||||| ||||||    
T  36409614 tgtcagacaccaacatgacaccgacacataattacactaaattat-gtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 39323288 - 39323246
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||    
T  39323288 attttgtcaaattattagcggtgtcgacgtttcagtgtccgtg 39323246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 42832311 - 42832353
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||||||||||||||||||||||| ||||| | |||||||    
T  42832311 attttctcaaattattagcggtgtcggtgtgtctgagtccgtg 42832353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 152
Target Start/End: Original strand, 18420417 - 18420504
Alignment:
Q  66 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 152  Q
    |||||||||||  ||||| ||||||||||  ||||||  | |||| ||| | |||||||||||||||||||| |||| |||||||||||    
T  18420417 catgtccgacatggacacaacaccgacacttataattgcattgaattat-gtgattttctcaaattattagcagtgttggcgtgtcagt 18420504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 29970581 - 29970622
Alignment:
Q  114 gcgattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    ||||||||||||||||||||||||||||   |||||||||||    
T  29970581 gcgattttctcaaattattagcggtgtcaatgtgtcagtgtc 29970622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 41942129 - 41942060
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgctt 186  Q
    ||||||||||||| ||| ||||| | ||||||||||||| ||| ||| || || |||||||| |||||||    
T  41942129 attttctcaaatttttaacggtgactgcgtgtcagtgtctgtgtcgtatcaggcgtccgtatccgtgctt 41942060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 34994017 - 34994053
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  34994017 tcaaattattagcggtgttggcgtatcagtgtccgtg 34994053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 42511322 - 42511358
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtcc 72  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtcc 42511358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 13425 - 13349
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    |||||||||||||||||||  ||||||||||||||||||||||| | | ||||| |||||||| |||||||||||||    
T  13425 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 13349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 191
Target Start/End: Complemental strand, 20279 - 20122
Alignment:
Q  36 ctatgaagcacggac---actcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaatta 130  Q
    |||||||||||||||   |||||||| ||||| | |||||  ||||||||| |||| ||||| |  ||||| | |||| ||| | |||||| ||||||||    
T  20279 ctatgaagcacggactgtactcctcggattaggcgtgtcc--caccgacacgacactgacacttgtaattacactgaattat-gtgattttttcaaatta 20183  T
Q  131 ttagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||| |||||||||||||| |||||||| ||||||||| ||||||||  |||||||||||    
T  20182 ttagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 20122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 21902 - 21978
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    |||||||||||||||||||  ||||||||||||||||||||||| | | ||||| |||||||| |||||||||||||    
T  21902 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 21978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 6427375 - 6427323
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6427375 gattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 398799 - 398858
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccg 175  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  398799 gattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccg 398858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 2896155 - 2896207
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  2896155 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccg 2896207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 183
Target Start/End: Original strand, 10572535 - 10572690
Alignment:
Q  37 tatgaagcacggacactcctcgaattagccatgtcc--------gacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaa 126  Q
    |||||||||||||||||||| ||||||| | |||||        |||||| |||| ||||||||||||  ||||| |  ||| ||| | |||||||||||    
T  10572535 tatgaagcacggacactccttgaattaggcgtgtccacgtgcctgacaccaacacaacaccgacacatttaattacaccgaattat-gtgattttctcaa 10572633  T
Q  127 attattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtg 183  Q
    |||||||| ||||||||||||||||||| | || ||||||||| |||||||| ||||    
T  10572634 attattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgtg 10572690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 5376535 - 5376609
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||||||||| || |||| ||||| |||||||    
T  5376535 attttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccgga-tctgtatacgtgcctcatagt 5376609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 5927374 - 5927449
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||| ||||||||||||| ||||  ||||||||||||||||| ||||||||| |||||||| ||||||| ||||    
T  5927374 gattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttaatag 5927449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 40917776 - 40917716
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||| ||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||    
T  40917776 gattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgt 40917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 17831565 - 17831604
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17831565 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 36878486 - 36878447
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36878486 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 176
Target Start/End: Complemental strand, 38503386 - 38503285
Alignment:
Q  76 accgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtc 173  Q
    |||||||  |||||||||||||  |||| | |||||||||  |||||||||||||||||||||||||||| |||| |||||||||| | ||||| | |||    
T  38503386 accgacaggacaccgacacatataattacactgaaatatat-gattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtc 38503288  T
Q  174 cgt 176  Q
    |||    
T  38503287 cgt 38503285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 48040503 - 48040558
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtat 178  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||||| ||||||||    
T  48040503 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtat 48040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 1262933 - 1262856
Alignment:
Q  91 acacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    |||| |||||||| |||| ||| | |||||||||||||||||||| ||||||||||||| |||| |||| |||||||||    
T  1262933 acacttaattatattgaattat-gtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccgg 1262856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 9709845 - 9709795
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtc 166  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| ||||||    
T  9709845 gattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 48547938 - 48547991
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacacc 89  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||| |||||    
T  48547938 ctatgaagcacggacactcctcgaattaggcgtatccgacaccgacacgacacc 48547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 6415035 - 6415078
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||    
T  6415035 gattttctcaaataattagcgatgtcggcgtgtcagtgtccgtg 6415078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 19562655 - 19562698
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||||||||||||||||| |||||||||||||||||| ||||    
T  19562655 gattttctcaaattattagcagtgtcggcgtgtcagtgttcgtg 19562698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 31015068 - 31014993
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||||||||||| |||| |||| ||||||| ||||| |||| |||| ||| || | ||||||||||||    
T  31015068 gattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgtgtccgtgcttcatag 31014993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 44482343 - 44482234
Alignment:
Q  34 aactatgaagcacggacactcctcgaattagc-----catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaa 126  Q
    ||||||| ||||||||||||||||| ||||||     | |||||||||||||||| ||||||||||  ||||||| | |||| ||| | |||||||||||    
T  44482343 aactatggagcacggacactcctcggattagctgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattat-gtgattttctcaa 44482245  T
Q  127 attattagcgg 137  Q
    ||||| |||||    
T  44482244 attataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 46348417 - 46348460
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  46348417 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 46348460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 48450622 - 48450673
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    ||||| ||||||||||||| |||| |||||||||||||||||| ||||||||    
T  48450622 attttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 15641064 - 15641130
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgt 182  Q
    |||||||| ||||||||||| |||||||| |||||||||||||| | ||||||  |||||| |||||    
T  15641064 gattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtccgtgttcgt 15641130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 34298461 - 34298411
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtc 166  Q
    ||||||||||||||||||| |||||||| |||||||| |||||| ||||||    
T  34298461 gattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 40285686 - 40285728
Alignment:
Q  114 gcgattttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    ||||||||||||||||||||||||||| || ||||||||||||    
T  40285686 gcgattttctcaaattattagcggtgttggtgtgtcagtgtcc 40285728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 609493 - 609530
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgt 154  Q
    |||||||||||||||||| |||||||||||||||||||    
T  609493 attttctcaaattattagtggtgtcggcgtgtcagtgt 609530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 3490426 - 3490463
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||||||||||||||| |||||||||||||||||||    
T  3490426 ttttctcaaattattagcagtgtcggcgtgtcagtgtc 3490463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 20157384 - 20157437
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    |||||||||| ||||||||||||||||  ||||||||| ||||| |||||||||    
T  20157384 gattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccgg 20157437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 41877505 - 41877554
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtc 166  Q
    ||||||||||||||||||||||||||||||  ||||||| ||| ||||||    
T  41877505 attttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtc 41877554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 10577769 - 10577829
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||||| |||  |||||| ||||||||||||| ||||||||| ||||||||| ||||||    
T  10577769 gattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgt 10577829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 12443494 - 12443538
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgc 160  Q
    |||||||||||||||||||| ||||||||||||| || |||||||    
T  12443494 gattttctcaaattattagctgtgtcggcgtgtccgtatccgtgc 12443538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 18556497 - 18556533
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||||||||| |||||||||||||||||||||||    
T  18556497 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 18556533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 169
Target Start/End: Original strand, 1486703 - 1486796
Alignment:
Q  77 ccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    ||||||| ||||||||||  ||||||| | |||| ||| | |||||| ||||||||||||| ||||| |||||||||| |||||| ||| |||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattat-gtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccgg 1486796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 9630634 - 9630689
Alignment:
Q  136 ggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||||||||||||  ||||| || ||| |||| ||||||||||||    
T  9630634 ggtgtcggcgtgtcagtgtccgtgttgtgtctggtgtctgtatccgtgcttcatag 9630689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 10475011 - 10475050
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  10475011 gattttctcaagttattagcggtgtcggcgtgtcaatgtc 10475050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 21378602 - 21378520
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatagtatatggtt 200  Q
    ||||| |||| |||||||| ||||||| |||||  |||||||| |||||||  | || |||| |||||||||||||||||||||    
T  21378602 attttttcaatttattagctgtgtcggtgtgtccatgtccgtgtcgtgtccata-tctgtatccgtgcttcatagtatatggtt 21378520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 21530714 - 21530675
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  21530714 gattttctcaaattattaacggtgtcggcgtgtctgtgtc 21530675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 5944304 - 5944254
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||| ||||||||    
T  5944304 ttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtccg 5944254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 7918245 - 7918303
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtcc 174  Q
    ||||||||||||||||||| | |||| |||||||| |||| ||| ||||||||| ||||    
T  7918245 gattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccggtgtcc 7918303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 13011252 - 13011310
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||| ||||||||||||| |||||||| ||||||||| |||| ||||| ||| ||||||    
T  13011252 ttttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgttcggtgtccgt 13011310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 25452152 - 25452221
Alignment:
Q  85 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    ||||||||||||||||| | |||| ||| | |||||||||||||||||||| |||| ||| |||| |||||    
T  25452152 acaccgacacataattacactgaattat-gagattttctcaaattattagcagtgttggcatgtcggtgtc 25452221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 38078695 - 38078771
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg--ccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||| ||||||||||||| |||||| ||||||||||| ||||  | |||||| | |||||||| ||||||||||||    
T  38078695 gattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccggtgtcc-gtgtccgtatccgtgcttcatag 38078771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 39130802 - 39130876
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||| |||||||||   ||||| |||||||| | ||| || ||||||||| |||||||| ||||||||||||    
T  39130802 attttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgtatccgtgcttcatag 39130876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 9103665 - 9103624
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccg 157  Q
    |||||| ||||||||||| | |||||||||||||||||||||    
T  9103665 gattttttcaaattattaactgtgtcggcgtgtcagtgtccg 9103624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 14359562 - 14359607
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    ||||||||||||| ||||||||||||| ||||| ||| ||||||||    
T  14359562 tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtccg 14359607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 19324587 - 19324518
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgct 185  Q
    |||||||||||||||| ||| |||||| ||| |||||| | |||| |||||||| |||||  ||||||||    
T  19324587 gattttctcaaattatcagcagtgtcgacgtatcagtgcctgtgctgtgtccggtgtccgcgttcgtgct 19324518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 25361960 - 25361881
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgt 146  Q
    |||||||||||||||| |||| ||||||||  |||| | |||| ||| | |||||||||||||||| || |||||||||||    
T  25361960 tgtccgacaccgacacgacactgacacatataattacactgaattat-gtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 37598857 - 37598816
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccg 157  Q
    |||||| ||||||||||||  |||||||||||||||||||||    
T  37598857 gattttttcaaattattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 5898300 - 5898352
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||||| ||| |||||||||||||||||||| |||||||| ||| | ||||||    
T  5898300 gattttttcagattattagcggtgtcggcgtctcagtgtctgtgtcatgtccg 5898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 6612206 - 6612258
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    ||||| ||||||||||| | || ||||||||||| |||||||| |||||||||    
T  6612206 attttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccgg 6612258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 9828118 - 9828036
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataa--ttataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtc 149  Q
    |||| ||||| ||||| ||||||||||||||  ||| | |||| ||| | |||||| |||||||||||| ||||||||||||||    
T  9828118 tgtctgacacggacacgacaccgacacataaaattacactgaattat-gtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 21057807 - 21057771
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtg 153  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  21057807 attttctaaaattattagcggtgtcgacgtgtcagtg 21057771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 22515921 - 22515965
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgc 160  Q
    |||||| ||||||||||||| ||||| ||||||| ||||||||||    
T  22515921 gattttttcaaattattagctgtgtctgcgtgtccgtgtccgtgc 22515965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 23636084 - 23636132
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    ||||||||||||| || ||||| ||||||||||| |||||||| |||||    
T  23636084 attttctcaaatttttggcggtttcggcgtgtcaatgtccgtgtcgtgt 23636132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 27471602 - 27471638
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgt 154  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  27471602 ttttctcaaattattagcggtatcggtgtgtcagtgt 27471638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 31672929 - 31672969
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    |||||| ||||||||||||| ||||||| ||||||||||||    
T  31672929 gattttttcaaattattagctgtgtcggtgtgtcagtgtcc 31672969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 36906022 - 36905982
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    |||||||||| |||||||||||||| || ||||||||||||    
T  36906022 gattttctcagattattagcggtgttggtgtgtcagtgtcc 36905982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 39953180 - 39953220
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    |||||||| |||||||||||||||||||||| || ||||||    
T  39953180 gattttctaaaattattagcggtgtcggcgtttccgtgtcc 39953220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 8383282 - 8383207
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||| | |||||| | |||||| |||||    
T  8383282 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccgtgctacatag 8383207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 5441029 - 5441128
Alignment:
Q  79 gacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgga-gtccgta 177  Q
    ||||| ||||||||||||||||  | |||| ||| | |||||||||||||| ||||||||| ||||||||||||||| ||| |||||||||| |||||||    
T  5441029 gacacaacaccgacacataattccattgaattat-gtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtccggatgtccgta 5441127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 24205076 - 24205135
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||||    
T  24205076 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 24205135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 8039818 - 8039903
Alignment:
Q  66 catgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtca 150  Q
    |||||||||||||||||| |||||||||||||  |||| | |||| ||||   |||||||||||||||||||||||| |||||||||    
T  8039818 catgtccgacaccgacacgacaccgacacatataattacactgaattatata-attttctcaaattattagcggtgttggcgtgtca 8039903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 10335327 - 10335386
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgt 182  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||||| |||||| |||||    
T  10335327 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 10335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 25064981 - 25064859
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtcc 167  Q
    ||||||||||| |||| | ||| ||||||||||| | | || ||| | |||||| |||||| ||||||||||||||||||||| |||| ||| |||||||    
T  25064981 tgtccgacaccaacacgataccaacacataattacactaaattat-gtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtcc 25064883  T
Q  168 ggagtccgtattcgtgcttcatag 191  Q
    || ||| |||  |||| |||||||    
T  25064882 ggtgtctgtacccgtgtttcatag 25064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 55401100 - 55401025
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||| ||||||||||||  |||||||||| |||||||||||| ||| ||||| ||||||||  |||||||||||    
T  55401100 gattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgtatctgtgcttcatag 55401025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 8587055 - 8587129
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcata 190  Q
    |||||| |||||||| |||  ||||||||||||||||||||||| | ||||||| ||||||||  ||||||||||    
T  8587055 gattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgtatctgtgcttcata 8587129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 8842346 - 8842280
Alignment:
Q  125 aaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||||||||||| ||||| | |||||| ||| ||||| |||||||| ||||||||||||    
T  8842346 aaattattagcggtgtcggcatgtcaatttccgtgtcgtatccggtgtccgtatccgtgcttcatag 8842280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 9800064 - 9800014
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtcc 167  Q
    |||||||||||||||||| ||||||||||||||||||| |||| |||||||    
T  9800064 attttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 32429414 - 32429488
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcata 190  Q
    |||||||| |||||||||||| |||||| |||||| ||| ||||  |||||||| |||||||| |||||||||||    
T  32429414 gattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgtatacgtgcttcata 32429488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 2620087 - 2620139
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    ||||||||||||| ||||| |||||||||||||||||||||| | ||||||||    
T  2620087 gattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 15796328 - 15796388
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||| ||||||||||| | |||||||||||||| |||||||| ||||||||| ||||||    
T  15796328 gattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15796388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 26492239 - 26492291
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||||| |||||||||||||  |||||||||||||||||||||| ||||||||    
T  26492239 gattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 28918026 - 28917966
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||| |||||||||||||  ||||||||||||||| |||||| ||||||||| ||||||    
T  28918026 gattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgt 28917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 4991002 - 4991061
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||||||||| ||||||||||||||| |||||||| |||||| ||||| ||| ||||||    
T  4991002 attttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgt 4991061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 159
Target Start/End: Complemental strand, 21720785 - 21720746
Alignment:
Q  120 ttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  21720785 ttctcaaattattatcggtgtcggcgtgtcagtgtccgtg 21720746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 12674535 - 12674585
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtc 166  Q
    |||||||||||||||||||| ||||||| |||||| |||||||| ||||||    
T  12674535 gattttctcaaattattagcagtgtcggtgtgtcaatgtccgtgtcgtgtc 12674585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 14223889 - 14223962
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    |||||||||||||||| | ||||||||||||| ||||| ||| ||||||| | ||| || |||||||||||||||    
T  14223889 ttttctcaaattattatctgtgtcggcgtgtcggtgtctgtgtcgtgtcc-gtgtctgtgttcgtgcttcatagt 14223962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 159
Target Start/End: Original strand, 3865592 - 3865633
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  3865592 ttttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 3865633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 5407261 - 5407325
Alignment:
Q  95 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgc 160  Q
    ||||||| |||||| ||| | |||||||||||||| ||||||||||||||||||| || |||||||    
T  5407261 ataattacaatgaattat-gtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtgc 5407325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 14829763 - 14829657
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    ||||| |||||||||| |||||||||| |  |||||  ||||| ||| | |||||| ||||||||||||| ||||||||||||||||||| ||| | |||    
T  14829763 tgtccaacaccgacacgacaccgacacttgtaattaccatgaattat-gtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtcatgt 14829666  T
Q  166 ccggagtcc 174  Q
    |||| ||||    
T  14829665 ccggtgtcc 14829657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 3164059 - 3164119
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||| ||||||||||||| |||||| |||| || |||||||| ||||||||| ||||||    
T  3164059 gattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgt 3164119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 10318075 - 10318111
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10318075 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 10318111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 14618804 - 14618732
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcata 190  Q
    |||||| |||||||||| |||||| |||| |||||| ||||| |||||| || |||||||  |||||||||||    
T  14618804 ttttcttaaattattaggggtgtcagcgtctcagtgcccgtgtcgtgtctggtgtccgtacccgtgcttcata 14618732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 6525714 - 6525757
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||||||||||||||||||||||| | ||||||||| ||||    
T  6525714 gattttctcaaattattagcggtgtcgacatgtcagtgtacgtg 6525757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 14747584 - 14747510
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtc-cgtgccgtgtccggagtccgtattcgtgcttcatagt 192  Q
    |||| ||||||||||||| |||||||||||||||||||  || | ||||||| | ||||||| |||||||||||||    
T  14747584 ttttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgta-tccgtatccgtgcttcatagt 14747510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 21479143 - 21479104
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  21479143 gattttttcaaattattagctgtgtcggcgtgtcagtgtc 21479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 26290396 - 26290357
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  26290396 gattttctcaaattattaatggtgtcggcgtgtcagtgtc 26290357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 159
Target Start/End: Complemental strand, 37077379 - 37077340
Alignment:
Q  120 ttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  37077379 ttctcaaattattatcggtgtcggcgtgtcactgtccgtg 37077340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 40052357 - 40052318
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  40052357 gattttttcaaattattagctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 4466538 - 4466576
Alignment:
Q  34 aactatgaagcacggacactcctcgaattagccatgtcc 72  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  4466538 aactatgaagcacggacactcctcgaataagccgtgtcc 4466576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 4987325 - 4987363
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgt 154  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  4987325 gattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 5440965 - 5440995
Alignment:
Q  34 aactatgaagcacggacactcctcgaattag 64  Q
    |||||||||||||||||||||||||||||||    
T  5440965 aactatgaagcacggacactcctcgaattag 5440995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 11658842 - 11658788
Alignment:
Q  114 gcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||||||||||||||||||| || ||| || ||||||||||| ||| ||||||||    
T  11658842 gcgattttctcaaattattaacgatgttggtgtgtcagtgtctgtgtcgtgtccg 11658788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 13807275 - 13807237
Alignment:
Q  34 aactatgaagcacggacactcctcgaattagccatgtcc 72  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  13807275 aactatgaaacacggacactcctcgaattaggcatgtcc 13807237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 23870593 - 23870635
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    |||||| |||||||||||||||||||| |||||| ||||||||    
T  23870593 gattttttcaaattattagcggtgtcgacgtgtccgtgtccgt 23870635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 34307794 - 34307867
Alignment:
Q  95 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    ||||||| | |||||||| | |||||||||||||||||||||||||| ||||||  ||||| ||| | |||||||    
T  34307794 ataattacactgaaatat-gtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtcatgtccgg 34307867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 49505188 - 49505230
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    ||||||||||||||||||||||| || ||||||| ||||||||    
T  49505188 gattttctcaaattattagcggtctctgcgtgtcggtgtccgt 49505230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 25093527 - 25093474
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    ||||||||||||| |||| | |||||||||||| |||||| ||| |||||||||    
T  25093527 gattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccgg 25093474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 25652066 - 25652115
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtc 166  Q
    ||||||||||||||||| | |||| ||||||| |||||||||| ||||||    
T  25652066 attttctcaaattattatccgtgttggcgtgttagtgtccgtgtcgtgtc 25652115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 41961691 - 41961744
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||  ||| ||||||||||||||| ||| ||||||||| ||||||    
T  41961691 tcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtccggtgtccgt 41961744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 1438849 - 1438790
Alignment:
Q  95 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    ||||||||| |||| ||| | |||||||||||||| |||||| |||||| |||||||||||    
T  1438849 ataattatactgaattat-gtgattttctcaaattgttagcgatgtcggtgtgtcagtgtc 1438790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 1514635 - 1514603
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    ||||||||||||||||||||||||||| |||||    
T  1514635 tcaaattattagcggtgtcggcgtgtccgtgtc 1514603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 3631708 - 3631644
Alignment:
Q  126 aattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcata 190  Q
    |||||| || ||||||||||||| | |||||||| |||||| || | |||||| |||||||||||    
T  3631708 aattataagtggtgtcggcgtgttattgtccgtgtcgtgtcaggtgaccgtatccgtgcttcata 3631644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 10268520 - 10268560
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    |||||| ||||||||||| | ||||||||||||||||||||    
T  10268520 gattttttcaaattattaactgtgtcggcgtgtcagtgtcc 10268560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 14979206 - 14979154
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||||| ||||||||||||| ||||||||||| || ||||| || ||||||||    
T  14979206 gattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgtccg 14979154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 15544742 - 15544679
Alignment:
Q  91 acacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||||||||||  ||| ||| | |||||| |||||||||||||||||||  ||||||||||||    
T  15544742 acacataattatacagaattat-gtgattttatcaaattattagcggtgtcaacgtgtcagtgtc 15544679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 149
Target Start/End: Complemental strand, 25074813 - 25074781
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtc 149  Q
    ||||||||||||||||| |||||||||||||||    
T  25074813 attttctcaaattattatcggtgtcggcgtgtc 25074781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 27505370 - 27505334
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtcc 72  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcc 27505334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 32804574 - 32804622
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtg 164  Q
    |||||||||||||||||| |||||||||| ||||| || ||||| ||||    
T  32804574 gattttctcaaattattaacggtgtcggcatgtcaatgcccgtgtcgtg 32804622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 182
Target Start/End: Complemental strand, 21149 - 21002
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattatta 133  Q
    |||||||||||||| ||| |||| ||||| | |||| ||||||||||| | |||||||||||  ||||||  ||  ||| | ||||||||||||||||||    
T  21149 ctatgaagcacggatacttctcggattaggcgtgtctgacaccgacacgataccgacacatataattataccgacttat-gtgattttctcaaattatta 21051  T
Q  134 gcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgt 182  Q
     | ||||| || |||||||||||||| |||||| || |||||| |||||    
T  21050 accgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtccgtgttcgt 21002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 21278 - 21217
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 97  Q
    |||||||||||||| |||||||| ||||| | |||| ||||||||||| | |||||||||||    
T  21278 ctatgaagcacggatactcctcggattaggcgtgtctgacaccgacacgataccgacacata 21217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 21407 - 21346
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 97  Q
    ||||||||||| |||||| |||| ||||| | |||| ||||||||||| | |||||||||||    
T  21407 ctatgaagcacagacacttctcggattaggcgtgtctgacaccgacacgataccgacacata 21346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 8823 - 8763
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  8823 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 8763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 225303 - 225362
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||||||    
T  225303 attttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 225362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 241668 - 241559
Alignment:
Q  68 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    ||||||||||| |||| ||||||||||  ||||||| | | || ||| | ||||||  |||||||||||| ||||||||||||||||||||||| |||||    
T  241668 tgtccgacaccaacacgacaccgacactcataattacactaaattat-gtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 241570  T
Q  166 ccggagtccgt 176  Q
    |||| ||||||    
T  241569 ccggtgtccgt 241559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 92831 - 92790
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  92831 attttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 178853 - 178925
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttca 188  Q
    |||||| ||||||||||||  ||||||||||||||||||||||| ||||||||| |||  ||| |||||||||    
T  178853 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcaatatccgtgcttca 178925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 192284 - 192325
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  192284 attttctcaaattattaacggtgtcggcgtgtcagtgtccgt 192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 23293020 - 23293080
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||| ||||||||||||| |||||||||||||| |||||||| ||||||||| ||||||    
T  23293020 gattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 23293080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 156
Target Start/End: Original strand, 17345451 - 17345489
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtcc 156  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17345451 ttttctcaaattattagcggtgtcggcgtgtcagtgtcc 17345489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 155
Target Start/End: Original strand, 35723420 - 35723458
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35723420 attttctcaaattattagcggtgtcggcgtgtcagtgtc 35723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 847975 - 847918
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtcc 174  Q
    |||||||||||||||||||||  |||||||||||||||| ||| ||||||||| ||||    
T  847975 attttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtcc 847918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 36635349 - 36635296
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccgg 169  Q
    ||||||||||||||||||| ||||| |||||||||||||||| | |||||||||    
T  36635349 gattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccgg 36635296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 24343531 - 24343472
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||||||||||||||| | ||||||||||||| | ||||||| ||||||||| ||||||    
T  24343531 attttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgt 24343472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 30982863 - 30982967
Alignment:
Q  68 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgt 165  Q
    |||| ||||||||||| ||||||||||  ||||||| | |||||||| | ||||||||||||| |||||||||   |||||||| ||||||||| ||| |    
T  30982863 tgtctgacaccgacacgacaccgacacttataattacactgaaatat-gtgattttctcaaatcattagcggt---ggcgtgtctgtgtccgtgtcgtat 30982958  T
Q  166 ccggagtcc 174  Q
    |||| ||||    
T  30982959 ccggtgtcc 30982967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 159
Target Start/End: Complemental strand, 7012090 - 7012048
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  7012090 attttctcaaattattatcggtgtcggcgtgtcggtgtccgtg 7012048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 20521883 - 20521933
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtc 166  Q
    |||||| ||||||||||| |||| |||||||||||||||||||| ||||||    
T  20521883 gattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtc 20521933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 20633508 - 20633450
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||| |||||||||||||||||||| |||||||||||||||  |||||| || ||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgt 20633450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 30299048 - 30298928
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattatta 133  Q
    ||||||||||||||||||||||| ||||| | |||||     || ||| |||||||||| |  ||||| | |||| |||  |  |||| |||||||||||    
T  30299048 ctatgaagcacggacactcctcggattagacgtgtcc-----cggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30298954  T
Q  134 gcggtgtcggcgtgtcagtgtccgtg 159  Q
    || |||||||||||||||||||||||    
T  30298953 gctgtgtcggcgtgtcagtgtccgtg 30298928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 30327916 - 30327796
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattatta 133  Q
    ||||||||||||||||||||||| ||||| | |||||     || ||| |||||||||| |  ||||| | |||| |||  |  |||| |||||||||||    
T  30327916 ctatgaagcacggacactcctcggattagacgtgtcc-----cggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30327822  T
Q  134 gcggtgtcggcgtgtcagtgtccgtg 159  Q
    || |||||||||||||||||||||||    
T  30327821 gctgtgtcggcgtgtcagtgtccgtg 30327796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 28084544 - 28084475
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttc 187  Q
    |||| ||||||| ||||| ||||||||||||||| ||| ||| ||||||||| ||||||||  |||||||    
T  28084544 ttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtccgtatctgtgcttc 28084475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 16184842 - 16184801
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||||||||||||||||||  |||||||||||||||||||||    
T  16184842 gattttctcaaattattagcg--gtcggcgtgtcagtgtccgtg 16184801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 28720894 - 28720827
Alignment:
Q  123 tcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||| |||||||| ||||||||| |||| ||||||| | ||| |||| ||||||||||||    
T  28720894 tcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgtcc-gtgtctgtatacgtgcttcatag 28720827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 12628619 - 12628693
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||| ||||||||||| | |||||||| |||||||||| ||| | |||||| | ||||||| ||||||||||||    
T  12628619 gattttttcaaattattaactgtgtcggcatgtcagtgtcagtgtcatgtccgta-tccgtatccgtgcttcatag 12628693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 159
Target Start/End: Complemental strand, 13783302 - 13783263
Alignment:
Q  120 ttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  13783302 ttctcaaataattagcggtgtcggtgtgtcagtgtccgtg 13783263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 21945527 - 21945468
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||| ||||||||||||| |||||||| |||||||||| ||| | ||||||| ||||||    
T  21945527 attttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtccgt 21945468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 903947 - 903905
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||    
T  903947 gattttctcaaattattaacggtgccggtgtgtcagtgtccgt 903905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 5414206 - 5414264
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtcc 174  Q
    |||||||| |||  |||||| ||||||||||||| ||||||||| ||||||||| ||||    
T  5414206 gattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtcgtgtccggtgtcc 5414264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 7670709 - 7670625
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcg---tgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatagtatatg 197  Q
    |||||||||||| |||||||  ||||||||   ||||||| |||| | |||||||||  ||| ||||||||||||||| ||||||    
T  7670709 gattttctcaaactattagcaatgtcggcgacgtgtcagtttccgcgtcgtgtccggtatccatattcgtgcttcatactatatg 7670625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 158
Target Start/End: Original strand, 22234875 - 22234967
Alignment:
Q  68 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttct-caaattattagcggtgtcggcgtgtcagtgtccgt 158  Q
    |||| ||||||||||| |||||||||||||  |||| | |||| ||| | |||||| | |||||| ||||||||||||||||||| ||||||||    
T  22234875 tgtcagacaccgacacgacaccgacacatagaattacactgaattat-gtgatttttttcaaatttttagcggtgtcggcgtgtccgtgtccgt 22234967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 150
Target Start/End: Complemental strand, 40613475 - 40613441
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtca 150  Q
    |||||||||||| ||||||||||||||||||||||    
T  40613475 gattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 49431048 - 49430998
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||| ||||||||||||| |||||||||||||| |||||| | ||||||||    
T  49431048 ttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcgtgtccg 49430998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 1747237 - 1747200
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtg 153  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  1747237 gattttctcaatttattagcggtgtcggcgtgtaagtg 1747200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 20743313 - 20743350
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgt 154  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  20743313 attttctcaaattattatccgtgtcggcgtgtcagtgt 20743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 30838234 - 30838185
Alignment:
Q  117 attttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtc 166  Q
    ||||| ||||||||||||| || ||| ||| |||||||||||||||||||    
T  30838234 attttatcaaattattagcagtatcgacgtatcagtgtccgtgccgtgtc 30838185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 3947798 - 3947877
Alignment:
Q  114 gcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatagtat 194  Q
    |||||||| ||||||||||||| |||||||| |||| ||||| |||  |||||| | ||||||||  | ||||||||||||    
T  3947798 gcgattttttcaaattattagctgtgtcggcatgtccgtgtctgtgtggtgtcc-gtgtccgtatctgagcttcatagtat 3947877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 5775392 - 5775469
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagt---gtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||||||  |||||||  ||||||||   ||||||| ||||||| | |||| ||||||||||||||||    
T  5775392 gattttctcaaattattaatggtgtcgt-gtgtcagtagtgtccgtgtcgtgtcctgtgtccatattcgtgcttcatag 5775469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 18844423 - 18844467
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtccgacaccga 80  Q
    |||||||||||||||||| |||| ||||| | |||||||||||||    
T  18844423 ctatgaagcacggacacttctcggattaggcgtgtccgacaccga 18844467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 28470484 - 28470448
Alignment:
Q  36 ctatgaagcacggacactcctcgaattagccatgtcc 72  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  28470484 ctatgaagcacggacactcctcggattaggcatgtcc 28470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 35158027 - 35158079
Alignment:
Q  124 caaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||||||||  | |||||||||||||||||||||  |||||||| ||||||    
T  35158027 caaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgt 35158079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 496 - 556
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||| ||||||||||||| |||||||||| |||||||||||| ||||| ||| ||||||    
T  496 gattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgt 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 17903 - 17979
Alignment:
Q  115 cgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||||||||||||||||| |||||||  ||||  ||  ||||||| | |||||||| ||||||||||||    
T  17903 cgattttctcaaattattagcggtgtaggcgtgttggtgtttgtatcgtgtccagtgtccgtatccgtgcttcatag 17979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 151
Target Start/End: Complemental strand, 53256 - 53170
Alignment:
Q  66 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcag 151  Q
    ||||||||||||||||||  |||||||||  ||||||| | |||| ||| | ||||||||||||||||| ||||| ||||||||||||    
T  53256 catgtccgacaccgacacggcaccgacacttataattacactgaattat-gtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 51836 - 51793
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 159  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  51836 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 51793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 28913 - 28830
Alignment:
Q  79 gacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgcc 161  Q
    ||||| |||||||||||||  |||| | |||| ||| |||||||||| ||||||||| |||||||||||||| ||||| ||||||    
T  28913 gacacaacaccgacacatataattacattgaattat-gcgattttcttaaattattaacggtgtcggcgtgttagtgttcgtgcc 28830  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 8729 - 8631
Alignment:
Q  79 gacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    ||||| ||||||||||  ||||||||| |||| ||| | |||||||  ||||||||||  |||||| ||||||||||||| || ||||||||| ||||||    
T  8729 gacacgacaccgacacttataattatactgaactat-gtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtccggtgtccgt 8631  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 46707 - 46655
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccg 168  Q
    |||||| ||||||||||| | |||||||||||||| |||||||| ||||||||    
T  46707 gattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccg 46655  T

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Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 46778 - 46731
Alignment:
Q  34 aactatgaagcacggacactcctcgaattagccatgtccgacaccgaca 82  Q
    ||||||||||||||||||||||||| ||||| | ||| |||||||||||    
T  46778 aactatgaagcacggacactcctcggattaggcgtgt-cgacaccgaca 46731  T

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Target: scaffold0697 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 1669 - 1630
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtc 155  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  1669 gattttctcaaattattaacggtgtcggcgtgtctgtgtc 1630  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 191
Target Start/End: Complemental strand, 23433 - 23371
Alignment:
Q  128 ttattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||| | ||||||||||||||||||| ||| ||||||| | |||||||| ||||||||||||    
T  23433 ttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtcc-gtgtccgtatccgtgcttcatag 23371  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 90868 - 90793
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    ||||||||||||||||||  ||||| || ||||||||||| ||| ||||||| |  |||||||| |||| ||||||    
T  90868 gattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtcgtgtccagtatccgtatttgtgcatcatag 90793  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 135346 - 135421
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||||||||||||||||||| ||||||| ||||  ||||| ||| ||| | ||| |||||||| | ||||||||||    
T  135346 gattttctcaaattattagcagtgtcggtgtgttggtgtctgtgtcgtattcggtgtccgtatccatgcttcatag 135421  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 71746 - 71679
Alignment:
Q  118 ttttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgtattcgtgcttcatag 191  Q
    |||| ||||||||||||| ||||||||||||||||||      ||||||||  |||||||| ||||||||||||    
T  71746 ttttttcaaattattagctgtgtcggcgtgtcagtgt------cgtgtccgatgtccgtatccgtgcttcatag 71679  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 8564 - 8592
Alignment:
Q  36 ctatgaagcacggacactcctcgaattag 64  Q
    |||||||||||||||||||||||||||||    
T  8564 ctatgaagcacggacactcctcgaattag 8592  T

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Target: scaffold0116 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 9923 - 9863
Alignment:
Q  116 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgccgtgtccggagtccgt 176  Q
    |||||||| |||  |||||| ||||||||||||| |||||| || ||||||||| ||||||    
T  9923 gattttctaaaaaaattagctgtgtcggcgtgtcggtgtccatgtcgtgtccggtgtccgt 9863  T

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