View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17364_high_18 (Length: 267)
Name: NF17364_high_18
Description: NF17364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17364_high_18 |
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Alignment Details
Target: chr1 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 11 - 253
Target Start/End: Complemental strand, 10650877 - 10650638
Alignment:
| Q |
11 |
cagagagaaagggaaaaagggctttatttaggacaaaaatatttgggtacaaaacttgtacttttaaaagggaaatgtttcctttatataggggactata |
110 |
Q |
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| T |
10650877 |
cagagagaaagggcaaaaggggtttatttagtacaaaaatattggggtacaaaacttgtacgtttaaaagggaagtatttcctttatataggggtctata |
10650778 |
T |
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| Q |
111 |
gacaacaaagttatgttgtgtgccaaattctgtttaatattttatt--atttgatataaaacaatggtaacttaattatgtatatgatgtcccacaaaca |
208 |
Q |
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| T |
10650777 |
gacaacaaagtt-----gtttgctaaattgtgtttaatattttattttattcgatataaaacaatggtaacttaattatgtatatgatgtcccacaaaca |
10650683 |
T |
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| Q |
209 |
cagatcatgtatgtcttgatattccaaagaatgaacaaaaatctg |
253 |
Q |
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| T |
10650682 |
cagatcatgtatgtcttgatattccaaagaatgaacaaaaatctg |
10650638 |
T |
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