View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17364_low_2 (Length: 672)

Name: NF17364_low_2
Description: NF17364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17364_low_2
NF17364_low_2
[»] chr3 (5 HSPs)
chr3 (15-670)||(26452029-26452682)
chr3 (602-664)||(29781015-29781077)
chr3 (602-664)||(36755942-36756004)
chr3 (604-664)||(52100378-52100438)
chr3 (602-664)||(54099248-54099310)
[»] chr4 (6 HSPs)
chr4 (602-670)||(31468880-31468948)
chr4 (602-670)||(15522466-15522534)
chr4 (602-672)||(34757800-34757870)
chr4 (602-672)||(34759074-34759144)
chr4 (627-670)||(31574856-31574899)
chr4 (602-664)||(16019594-16019656)
[»] chr2 (5 HSPs)
chr2 (602-670)||(12070959-12071027)
chr2 (604-670)||(14328493-14328559)
chr2 (602-664)||(19843602-19843664)
chr2 (605-664)||(39309527-39309586)
chr2 (602-664)||(7084606-7084668)
[»] chr1 (4 HSPs)
chr1 (602-670)||(30519516-30519584)
chr1 (602-670)||(52437606-52437674)
chr1 (600-670)||(29877409-29877479)
chr1 (602-664)||(34817936-34817998)
[»] chr7 (5 HSPs)
chr7 (602-668)||(41430043-41430109)
chr7 (602-668)||(42584916-42584982)
chr7 (602-668)||(36352475-36352542)
chr7 (600-670)||(34507095-34507165)
chr7 (602-670)||(34108748-34108818)
[»] chr8 (3 HSPs)
chr8 (600-668)||(45405645-45405713)
chr8 (602-670)||(39453208-39453276)
chr8 (602-670)||(3413084-3413152)
[»] chr5 (3 HSPs)
chr5 (602-664)||(16690617-16690679)
chr5 (602-670)||(6758681-6758750)
chr5 (606-670)||(14321850-14321914)


Alignment Details
Target: chr3 (Bit Score: 596; Significance: 0; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 596; E-Value: 0
Query Start/End: Original strand, 15 - 670
Target Start/End: Original strand, 26452029 - 26452682
Alignment:
Q  15 ctgtgatgaaaatgcttgaattgggattctatcctgagtatttggatagagttgctgttatgcaaggtttaaggaaaaggatacagcaatatggaaattt 114  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26452029 ctgtaatgaaaatgcttgaattgggattctatcctgagtatttggatagagttgctgttatgcaaggtttaaggaaaaggatacagcaatatggaaattt 26452128  T
Q  115 agatctttatatcaagctttgtaagtcactgtctgaagcaaatcttataggaccttgtcttgtgtatttgtatgttagaaaatataagctttgggttgtg 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26452129 agatctttatatcaagctttgtaagtcactgtctgaagcaaatcttataggaccttgtcttgtgtatttgtatgttagaaaatataagctttgggttgtg 26452228  T
Q  215 aaaatgatctaagaaaagttcttgtaaaaaacctgccaatttttcaaacctttggttttagaggcttagttgtgtattgtaactagagcatcgattttgt 314  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26452229 aaaatgatctaagaaaagtacttgtaaaaaacctgccaatttttcaaacctttggttttagaggcttagttgtgtattgtaactagagcatcgattttgt 26452328  T
Q  315 tggtgcttgtataaatttgtatagttgtaatgtcaaaaggaccaattctagtggttgttataatgagtatgtgtataataatatataattcggattattt 414  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26452329 tggtgcttgtataaatttgtatagttttaatgtcaaaaggaccaattctagtggttgttataatgagtatgtgtataataatatataattcggattattt 26452428  T
Q  415 ccccacgacattctcatgtaatattatattacaagttagacaaatgatgtaatcatattatatataatctttgcttcaacttatgctataatttgtcagn 514  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  26452429 ccccacgacattctcatgtaatattatattacaagttagacaaatgatgtaatcatattatatataatctttgcttcaacttatgctataatttgtcag- 26452527  T
Q  515 nnnnnnnntaatactttatgccataaaataaaatattgcttcaacttgatgttagagcattatttgagatttgcttttgtgacccgaaatgttatttgaa 614  Q
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  26452528 -taaaaaataatactttatgccataaaataaaatattgcttcaacttgatgttagagcattatttgagatttgcttttgtgatctgaaatgttatttgaa 26452626  T
Q  615 tatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcatgt 670  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  26452627 tatcaatgtgattgacaattatatggacaatcatctttttacaaagaaaatcatgt 26452682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 602 - 664
Target Start/End: Complemental strand, 29781077 - 29781015
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaa 664  Q
    ||||||||||| | |||||| ||| |||||||||||||||||||||| |||||| ||||||||    
T  29781077 aatgttatttggacatcaatttgattgacaatcatatggacaatcatatttttataaagaaaa 29781015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 602 - 664
Target Start/End: Original strand, 36755942 - 36756004
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaa 664  Q
    |||||||||||||||||||| ||| ||||||||| || ||||| ||| |||||||||||||||    
T  36755942 aatgttatttgaatatcaatttgattgacaatcacattgacaaccatatttttacaaagaaaa 36756004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 604 - 664
Target Start/End: Complemental strand, 52100438 - 52100378
Alignment:
Q  604 tgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaa 664  Q
    ||||||||||| |||||| ||  ||||||| | |||||||||||| |||||||||||||||    
T  52100438 tgttatttgaacatcaatttgcttgacaattaaatggacaatcatatttttacaaagaaaa 52100378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 602 - 664
Target Start/End: Original strand, 54099248 - 54099310
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaa 664  Q
    ||||||||||||| |||||| ||  ||||||| | || ||||||||| |||||||||||||||    
T  54099248 aatgttatttgaacatcaatttggttgacaattacattgacaatcatatttttacaaagaaaa 54099310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 2e-23; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 602 - 670
Target Start/End: Original strand, 31468880 - 31468948
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcatgt 670  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  31468880 aatgttatttgaatatcaatgtgattgacaaccatatagacaatcatctttttacaaagaaaatcatgt 31468948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 602 - 670
Target Start/End: Complemental strand, 15522534 - 15522466
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcatgt 670  Q
    ||||||||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||||||||    
T  15522534 aatgttatttgaacatcaatgtgattgacaaccacatggacaaccatctttttacaaagaaaatcatgt 15522466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 602 - 672
Target Start/End: Original strand, 34757800 - 34757870
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcatgtgt 672  Q
    |||||||||| ||||||||| ||| ||||||||| |  ||||||||| ||||||||||||||| |||||||    
T  34757800 aatgttatttaaatatcaatttgattgacaatcacactgacaatcatatttttacaaagaaaaacatgtgt 34757870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 602 - 672
Target Start/End: Original strand, 34759074 - 34759144
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcatgtgt 672  Q
    |||||||||| ||||||||| ||| ||||||||| |  ||||||||| ||||||||||||||| |||||||    
T  34759074 aatgttatttaaatatcaatttgattgacaatcacactgacaatcatatttttacaaagaaaaacatgtgt 34759144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 670
Target Start/End: Original strand, 31574856 - 31574899
Alignment:
Q  627 tgacaatcatatggacaatcatctttttacaaagaaaatcatgt 670  Q
    |||||| || |||||||| |||||||||||||||||||||||||    
T  31574856 tgacaaccacatggacaaccatctttttacaaagaaaatcatgt 31574899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 602 - 664
Target Start/End: Complemental strand, 16019656 - 16019594
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaa 664  Q
    ||||||||||||| |||||| ||| |||||| ||||| ||||| ||| |||||| ||||||||    
T  16019656 aatgttatttgaacatcaatttgattgacaagcatattgacaaccatatttttataaagaaaa 16019594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 1e-18; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 602 - 670
Target Start/End: Complemental strand, 12071027 - 12070959
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcatgt 670  Q
    ||||||||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||||||||    
T  12071027 aatgttatttgaacatcaatgtgattgacaaccacatggacaaccatctttttacaaagaaaatcatgt 12070959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 604 - 670
Target Start/End: Complemental strand, 14328559 - 14328493
Alignment:
Q  604 tgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcatgt 670  Q
    ||||||||||| |||| ||||| |||||| || ||||||||| || ||||||| |||||||||||||    
T  14328559 tgttatttgaacatcattgtgattgacaaccacatggacaattatatttttactaagaaaatcatgt 14328493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 602 - 664
Target Start/End: Complemental strand, 19843664 - 19843602
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaa 664  Q
    ||||||||||||| |||||| ||  |||||||||||| |||||| || |||||||||||||||    
T  19843664 aatgttatttgaacatcaatttggttgacaatcatattgacaattatatttttacaaagaaaa 19843602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 664
Target Start/End: Complemental strand, 39309586 - 39309527
Alignment:
Q  605 gttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaa 664  Q
    |||||||||| |||||| ||  |||||||||||| || |||||| |||||||||||||||    
T  39309586 gttatttgaaaatcaatttggttgacaatcatattgataatcatatttttacaaagaaaa 39309527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 602 - 664
Target Start/End: Original strand, 7084606 - 7084668
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaa 664  Q
    ||||||||||||| |||||| ||  |||||| || || ||||||||| |||||||||||||||    
T  7084606 aatgttatttgaacatcaatttggttgacaaccacattgacaatcatatttttacaaagaaaa 7084668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 1e-18; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 602 - 670
Target Start/End: Original strand, 30519516 - 30519584
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcatgt 670  Q
    ||||||||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||||||||    
T  30519516 aatgttatttgaacatcaatgtgattgacaaccacatggacaaccatctttttacaaagaaaatcatgt 30519584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 602 - 670
Target Start/End: Complemental strand, 52437674 - 52437606
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcatgt 670  Q
    |||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||| ||||| ||||    
T  52437674 aatgttatttaaatatcaatgtgattgacaatcacatggacaaccatctttttacaaataaaattatgt 52437606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 600 - 670
Target Start/End: Complemental strand, 29877479 - 29877409
Alignment:
Q  600 gaaatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcatgt 670  Q
    ||||||||||||||| |||||| | | |||||||||||||||||| ||| |||||||||||||||| ||||    
T  29877479 gaaatgttatttgaacatcaattttattgacaatcatatggacaaccatatttttacaaagaaaattatgt 29877409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 602 - 664
Target Start/End: Original strand, 34817936 - 34817998
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaa 664  Q
    ||||||||||||| |||||| |   |||||||||||| ||||| ||| |||||||||||||||    
T  34817936 aatgttatttgaacatcaatttagttgacaatcatattgacaaccatatttttacaaagaaaa 34817998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 602 - 668
Target Start/End: Original strand, 41430043 - 41430109
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcat 668  Q
    ||||||||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||||||    
T  41430043 aatgttatttgaacatcaatgtgattgacaaccacatggacaaccatctttttacaaagaaaatcat 41430109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 602 - 668
Target Start/End: Complemental strand, 42584982 - 42584916
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcat 668  Q
    ||||||||||||| |||||||||| |||||| || |||||||| |||||||||||||||||||||||    
T  42584982 aatgttatttgaacatcaatgtgattgacaaccacatggacaaccatctttttacaaagaaaatcat 42584916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 602 - 668
Target Start/End: Original strand, 36352475 - 36352542
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatc-atatggacaatcatctttttacaaagaaaatcat 668  Q
    ||||||||||||| |||||||||| |||||| | | |||||||| |||||||||||||||||||||||    
T  36352475 aatgttatttgaacatcaatgtgattgacaaactacatggacaaccatctttttacaaagaaaatcat 36352542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 600 - 670
Target Start/End: Original strand, 34507095 - 34507165
Alignment:
Q  600 gaaatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcatgt 670  Q
    ||||||||||||||| |||||||||| |||||| || ||||||||  ||||||||| ||| ||||||||||    
T  34507095 gaaatgttatttgaacatcaatgtgattgacaaccacatggacaactatctttttataaaaaaaatcatgt 34507165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 602 - 670
Target Start/End: Original strand, 34108748 - 34108818
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggac-aatcatcttttt-acaaagaaaatcatgt 670  Q
    ||||||||||||| |||||||||| |||||| || |||||| || ||||||||| | ||||||||||||||    
T  34108748 aatgttatttgaacatcaatgtgattgacaaccacatggacaaaccatctttttaaaaaagaaaatcatgt 34108818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 600 - 668
Target Start/End: Complemental strand, 45405713 - 45405645
Alignment:
Q  600 gaaatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcat 668  Q
    ||||||||||||||| |||||||||| |||||| || ||||||||  || |||||||||||||||||||    
T  45405713 gaaatgttatttgaacatcaatgtgattgacaaccacatggacaactatatttttacaaagaaaatcat 45405645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 602 - 670
Target Start/End: Original strand, 39453208 - 39453276
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcatgt 670  Q
    ||||||||||||| |||||| ||| |||||| || || ||||||||| |||||||||||||||| ||||    
T  39453208 aatgttatttgaacatcaatttgattgacaaccacattgacaatcatatttttacaaagaaaattatgt 39453276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 602 - 670
Target Start/End: Original strand, 3413084 - 3413152
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcatgt 670  Q
    ||||||||||||| |||||| ||  ||||||  | || |||| |||| |||||||||||||||||||||    
T  3413084 aatgttatttgaacatcaatttggttgacaacaacattgacagtcatatttttacaaagaaaatcatgt 3413152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000006; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 602 - 664
Target Start/End: Complemental strand, 16690679 - 16690617
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaa 664  Q
    |||||||||||||||||||| ||  |||||| || || ||||| ||| |||||||||||||||    
T  16690679 aatgttatttgaatatcaatttggttgacaaccacattgacaaccatatttttacaaagaaaa 16690617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 670
Target Start/End: Original strand, 6758681 - 6758750
Alignment:
Q  602 aatgttatttgaatatcaatgtgactgacaatcatatggacaatca-tctttttacaaagaaaatcatgt 670  Q
    ||||||||||||| |||||| ||| |||||| || |||||||| || | ||||| |||||||||||||||    
T  6758681 aatgttatttgaacatcaatatgattgacaaccacatggacaaccatttttttttcaaagaaaatcatgt 6758750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 606 - 670
Target Start/End: Original strand, 14321850 - 14321914
Alignment:
Q  606 ttatttgaatatcaatgtgactgacaatcatatggacaatcatctttttacaaagaaaatcatgt 670  Q
    ||||||||| |||||| | | |||||| ||||||||||| |||  ||||||||||||||| ||||    
T  14321850 ttatttgaacatcaatttaattgacaaccatatggacaaccatacttttacaaagaaaattatgt 14321914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University